ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15k05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479151.1| Oryza sativa (japonica cultivar-group), mRNA 188 1e-44
2dbj|AK111336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5gb|AY104391.1| Zea mays PCO073745 mRNA sequence 100 1e-17
6dbj|AK062571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 9e-15
7gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genom... 56 1e-04
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 1e-04
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
10emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L... 46 0.13
11gb|AF419981.1|AF419981 Drosophila yakuba defective chorion-1 fc1... 44 0.50
12gb|AF419980.1|AF419980 Drosophila yakuba defective chorion-1 fc1... 44 0.50
13gb|AF419979.1|AF419979 Drosophila yakuba defective chorion-1 fc1... 44 0.50
14emb|CR407598.24| Zebrafish DNA sequence from clone CH211-141I4 i... 44 0.50
15emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 i... 42 2.0
16ref|XM_677758.1| PREDICTED: Danio rerio similar to trinucleotide... 42 2.0
17gb|AY702083.1| Oikopleura dioica homeodomain protein NK2a (NK2a)... 42 2.0
18gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, com... 40 7.9
19gb|AC147708.7| Canis Familiaris, clone XX-25G10, complete sequence 40 7.9
20gb|AE006423.1| Lactococcus lactis subsp. lactis IL1403 section 1... 40 7.9
21gb|AF154094.1| Uncultured hydrocarbon seep bacterium BPC065 16S ... 40 7.9
22gb|AY484743.1| Uncultured bacterium clone 99917 16S ribosomal RN... 40 7.9
23gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 40 7.9
24gb|AC122332.4| Mus musculus BAC clone RP23-346G14 from chromosom... 40 7.9
25gb|AC123041.2| Mus musculus BAC clone RP24-545E4 from 3, complet... 40 7.9
26gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 40 7.9
27emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chr... 40 7.9
28gb|AC091160.6| Homo sapiens chromosome 8, clone CTD-2025J6, comp... 40 7.9
29gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, co... 40 7.9
30gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, comple... 40 7.9
31gb|DQ394922.1| Uncultured bacterium clone VHS-B1-47 16S ribosoma... 40 7.9
32gb|DQ394901.1| Uncultured delta proteobacterium clone VHS-B1-26 ... 40 7.9
33gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, co... 40 7.9
34gb|AY169692.1| Gallus gallus adenosine receptor 2B gene, complet... 40 7.9
35emb|AJ582703.1|UDE582703 Uncultured Desulfobacteraceae bacterium... 40 7.9
36gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 7.9
37gb|AC005242.1|AC005242 Homo sapiens chromosome 17, clone hRPK.11... 40 7.9
38gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 40 7.9
39emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 7.9
40gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome... 40 7.9 
>ref|XM_479151.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1362

 Score =  188 bits (95), Expect = 1e-44
 Identities = 185/215 (86%)
 Strand = Plus / Plus

                                                                       
Query: 46  ggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaaggac 105
           ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 482 ggttacttggctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggat 541

                                                                       
Query: 106 atgcctcttgataacgttttcgcaccacagcagatcgctcttctcacagcaaaggcatgg 165
           || || ||||| || ||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 542 ataccccttgacaaagttttggcggcacagcagattggccttctcacagcgaaggcatgg 601

                                                                       
Query: 166 ctttctgcagacaaacaactggagagaaaggtgataaaattaagcatagagaatagtgtt 225
           |||||| | ||||| |||||||||||||||||| | ||| |||||||  | |||||  ||
Sbjct: 602 ctttcttctgacaagcaactggagagaaaggtggtgaaactaagcattcaaaatagcatt 661

                                              
Query: 226 ctttcagagtacacaagcatggttgtacttcaaac 260
           | |||||||||||| ||||||||  ||||||||||
Sbjct: 662 ccttcagagtacacgagcatggtcctacttcaaac 696



 Score =  121 bits (61), Expect = 3e-24
 Identities = 157/185 (84%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                       
Query: 373 gccaccaaggaaaacctcctcacaggttttggcgaggagaaaccactggagacgttgaag 432
           ||||||| ||| |||||| |||| ||||| ||||| | ||| || |||||||||||  ||
Sbjct: 815 gccaccagggagaacctcgtcacgggtttcggcgacgtgaagccgctggagacgttcgag 874

                                                                       
Query: 433 atattcaagaaggctgggagggtgctgcagcccgcgttgcggactgcctctgctgcatgt 492
           ||  |||| ||||| |   || |||||||||| || | || |||||||||||||||||||
Sbjct: 875 atcctcaacaaggccgcc-ggctgctgcagcc-gcctcgccgactgcctctgctgcatgt 932

                                                                       
Query: 493 gctgcatcaaaggcgtgcaacaggatgaacgaccagtgcgccatcatgatggcgcaggtc 552
           |||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 933 gctgcatcaa-ggcctgcaacaagatgaacgaccagtgcgccatcgtgatgacgcaggtc 991

                
Query: 553 tgcgc 557
           |||||
Sbjct: 992 tgcgc 996



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 271 gcagcacaaaaagtcaagcagaaaccgaaaggacacaa 308
           ||||||||||| ||||||||||||| |||||| |||||
Sbjct: 713 gcagcacaaaaggtcaagcagaaactgaaaggtcacaa 750
to top
>dbj|AK111336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F03, full
           insert sequence
          Length = 1362

 Score =  188 bits (95), Expect = 1e-44
 Identities = 185/215 (86%)
 Strand = Plus / Plus

                                                                       
Query: 46  ggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaaggac 105
           ||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 482 ggttacttggctgacatgagagagatctcgattgaacttaaggtgcagcatataaaggat 541

                                                                       
Query: 106 atgcctcttgataacgttttcgcaccacagcagatcgctcttctcacagcaaaggcatgg 165
           || || ||||| || ||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 542 ataccccttgacaaagttttggcggcacagcagattggccttctcacagcgaaggcatgg 601

                                                                       
Query: 166 ctttctgcagacaaacaactggagagaaaggtgataaaattaagcatagagaatagtgtt 225
           |||||| | ||||| |||||||||||||||||| | ||| |||||||  | |||||  ||
Sbjct: 602 ctttcttctgacaagcaactggagagaaaggtggtgaaactaagcattcaaaatagcatt 661

                                              
Query: 226 ctttcagagtacacaagcatggttgtacttcaaac 260
           | |||||||||||| ||||||||  ||||||||||
Sbjct: 662 ccttcagagtacacgagcatggtcctacttcaaac 696



 Score =  121 bits (61), Expect = 3e-24
 Identities = 157/185 (84%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                       
Query: 373 gccaccaaggaaaacctcctcacaggttttggcgaggagaaaccactggagacgttgaag 432
           ||||||| ||| |||||| |||| ||||| ||||| | ||| || |||||||||||  ||
Sbjct: 815 gccaccagggagaacctcgtcacgggtttcggcgacgtgaagccgctggagacgttcgag 874

                                                                       
Query: 433 atattcaagaaggctgggagggtgctgcagcccgcgttgcggactgcctctgctgcatgt 492
           ||  |||| ||||| |   || |||||||||| || | || |||||||||||||||||||
Sbjct: 875 atcctcaacaaggccgcc-ggctgctgcagcc-gcctcgccgactgcctctgctgcatgt 932

                                                                       
Query: 493 gctgcatcaaaggcgtgcaacaggatgaacgaccagtgcgccatcatgatggcgcaggtc 552
           |||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 933 gctgcatcaa-ggcctgcaacaagatgaacgaccagtgcgccatcgtgatgacgcaggtc 991

                
Query: 553 tgcgc 557
           |||||
Sbjct: 992 tgcgc 996



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 271 gcagcacaaaaagtcaagcagaaaccgaaaggacacaa 308
           ||||||||||| ||||||||||||| |||||| |||||
Sbjct: 713 gcagcacaaaaggtcaagcagaaactgaaaggtcacaa 750
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 3e-24
 Identities = 157/185 (84%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                            
Query: 373      gccaccaaggaaaacctcctcacaggttttggcgaggagaaaccactggagacgttgaag 432
                ||||||| ||| |||||| |||| ||||| ||||| | ||| || |||||||||||  ||
Sbjct: 25251548 gccaccagggagaacctcgtcacgggtttcggcgacgtgaagccgctggagacgttcgag 25251607

                                                                            
Query: 433      atattcaagaaggctgggagggtgctgcagcccgcgttgcggactgcctctgctgcatgt 492
                ||  |||| ||||| |   || |||||||||| || | || |||||||||||||||||||
Sbjct: 25251608 atcctcaacaaggccgcc-ggctgctgcagcc-gcctcgccgactgcctctgctgcatgt 25251665

                                                                            
Query: 493      gctgcatcaaaggcgtgcaacaggatgaacgaccagtgcgccatcatgatggcgcaggtc 552
                |||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 25251666 gctgcatcaa-ggcctgcaacaagatgaacgaccagtgcgccatcgtgatgacgcaggtc 25251724

                     
Query: 553      tgcgc 557
                |||||
Sbjct: 25251725 tgcgc 25251729



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 46       ggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
                ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 25249928 ggttacttggctgacatgagagagatctcgattgaacttaaggtgcagcatataaagga 25249986



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 131      cacagcagatcgctcttctcacagcaaaggcatggctttctgcagacaaacaactggaga 190
                |||||||||| |  ||||||||||| ||||||||||||||| | ||||| ||||||||||
Sbjct: 25250146 cacagcagattggccttctcacagcgaaggcatggctttcttctgacaagcaactggaga 25250205

                         
Query: 191      gaaaggtga 199
                |||||||||
Sbjct: 25250206 gaaaggtga 25250214



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 228      ttcagagtacacaagcatggttgtacttcaaac 260
                |||||||||||| ||||||||  ||||||||||
Sbjct: 25251271 ttcagagtacacgagcatggtcctacttcaaac 25251303
to top
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score =  121 bits (61), Expect = 3e-24
 Identities = 157/185 (84%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                         
Query: 373   gccaccaaggaaaacctcctcacaggttttggcgaggagaaaccactggagacgttgaag 432
             ||||||| ||| |||||| |||| ||||| ||||| | ||| || |||||||||||  ||
Sbjct: 68219 gccaccagggagaacctcgtcacgggtttcggcgacgtgaagccgctggagacgttcgag 68278

                                                                         
Query: 433   atattcaagaaggctgggagggtgctgcagcccgcgttgcggactgcctctgctgcatgt 492
             ||  |||| ||||| |   || |||||||||| || | || |||||||||||||||||||
Sbjct: 68279 atcctcaacaaggccgcc-ggctgctgcagcc-gcctcgccgactgcctctgctgcatgt 68336

                                                                         
Query: 493   gctgcatcaaaggcgtgcaacaggatgaacgaccagtgcgccatcatgatggcgcaggtc 552
             |||||||||| ||| ||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct: 68337 gctgcatcaa-ggcctgcaacaagatgaacgaccagtgcgccatcgtgatgacgcaggtc 68395

                  
Query: 553   tgcgc 557
             |||||
Sbjct: 68396 tgcgc 68400



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 46    ggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
             ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 66599 ggttacttggctgacatgagagagatctcgattgaacttaaggtgcagcatataaagga 66657



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 131   cacagcagatcgctcttctcacagcaaaggcatggctttctgcagacaaacaactggaga 190
             |||||||||| |  ||||||||||| ||||||||||||||| | ||||| ||||||||||
Sbjct: 66817 cacagcagattggccttctcacagcgaaggcatggctttcttctgacaagcaactggaga 66876

                      
Query: 191   gaaaggtga 199
             |||||||||
Sbjct: 66877 gaaaggtga 66885



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 228   ttcagagtacacaagcatggttgtacttcaaac 260
             |||||||||||| ||||||||  ||||||||||
Sbjct: 67942 ttcagagtacacgagcatggtcctacttcaaac 67974
to top
>gb|AY104391.1| Zea mays PCO073745 mRNA sequence
          Length = 1301

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 81/90 (90%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                        
Query: 471  gcggactgcctctgctgcatgtgctgcatcaaaggcgtgcaacaggatgaacgaccagtg 530
            |||||||||  |||||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct: 957  gcggactgctgctgctgcatgtgcttcatcaa-ggcgtgcagcaagatgaacgaccagtg 1015

                                          
Query: 531  cgccatcatgatggcgcaggtctgcgccgc 560
            ||||||| | |||||||||| |||||||||
Sbjct: 1016 cgccatcgtcatggcgcaggcctgcgccgc 1045



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 177/219 (80%), Gaps = 2/219 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  gggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
           |||| |||||||||||||||  || || || |||||| |||| ||||| |||||||||||
Sbjct: 521 gggtcacttggctgacatgagtgaaatatctattgaattgaaagtccaacatataaagga 580

                                                                       
Query: 105 catgcctcttgataacgttttcgcaccacagcagatcgctcttctcacagcaaaggcatg 164
            || ||||||||||| || || |||   || ||||| | ||||||||||||||| |||||
Sbjct: 581 tatacctcttgataaagtattggcaaagcaacagatggatcttctcacagcaaaagcatg 640

                                                                       
Query: 165 gctttctgcag-acaaacaactggagagaaaggtgataaaattaagcatagagaatagtg 223
           || || || || ||||  | || ||| |||||||  | |||||||||||| | |||||  
Sbjct: 641 gc-ttatggagaacaaggagcttgagcgaaaggttgtgaaattaagcatacaaaatagcc 699

                                                  
Query: 224 ttctttcagagtacacaagcatggttgtacttcaaacca 262
           ||| ||| ||||||||| |||||||  ||||||||||||
Sbjct: 700 ttccttctgagtacacacgcatggtactacttcaaacca 738
to top
>dbj|AK062571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C06, full
           insert sequence
          Length = 1289

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 135/165 (81%)
 Strand = Plus / Plus

                                                                       
Query: 45  gggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
           ||||||||||||||||||||  || || ||||||||| ||| |||||| ||| |||||||
Sbjct: 515 gggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaagga 574

                                                                       
Query: 105 catgcctcttgataacgttttcgcaccacagcagatcgctcttctcacagcaaaggcatg 164
            ||  ||||||| || || || |||   |||||||| | ||||||||||||||| |||||
Sbjct: 575 tatttctcttgacaaagtgttagcaaagcagcagatggatcttctcacagcaaaagcatg 634

                                                        
Query: 165 gctttctgcagacaaacaactggagagaaaggtgataaaattaag 209
           | ||| || | |||| ||||| ||||  |||||| ||||||||||
Sbjct: 635 gttttatgaaaacaatcaactagagatgaaggtggtaaaattaag 679



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/102 (83%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                        
Query: 472  cggactgcctctgctgcatgtgctgcatcaaaggcgtgcaacaggatgaacgaccagtgc 531
            ||||||||  |||||||||||||| ||||||   | |||| || ||||||||||| ||||
Sbjct: 940  cggactgctgctgctgcatgtgcttcatcaacacc-tgcagcaagatgaacgaccggtgc 998

                                                      
Query: 532  gccatcatgatggcgcaggtctgcgccgcgcctctcgtgcct 573
            |||||| | |||| |||| | |||| |||| |||||||||||
Sbjct: 999  gccatcgtcatggtgcagctgtgcggcgcg-ctctcgtgcct 1039
to top
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete
             sequence
          Length = 145714

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 45    gggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
             ||||||||||||||||||||  || || ||||||||| ||| |||||| ||| |||||||
Sbjct: 70851 gggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaagga 70910



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/102 (83%), Gaps = 2/102 (1%)
 Strand = Plus / Plus

                                                                         
Query: 472   cggactgcctctgctgcatgtgctgcatcaaaggcgtgcaacaggatgaacgaccagtgc 531
             ||||||||  |||||||||||||| ||||||   | |||| || ||||||||||| ||||
Sbjct: 73499 cggactgctgctgctgcatgtgcttcatcaacacc-tgcagcaagatgaacgaccggtgc 73557

                                                       
Query: 532   gccatcatgatggcgcaggtctgcgccgcgcctctcgtgcct 573
             |||||| | |||| |||| | |||| |||| |||||||||||
Sbjct: 73558 gccatcgtcatggtgcagctgtgcggcgcg-ctctcgtgcct 73598



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 133   cagcagatcgctcttctcacagcaaaggcatggctttctgcagacaaacaactggaga 190
             |||||||| | ||||||||||||||| |||||| ||| || | |||| ||||| ||||
Sbjct: 71833 cagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatcaactagaga 71890
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 45       gggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
                ||||||||||||||||||||  || || ||||||||| ||| |||||| ||| |||||||
Sbjct: 16513482 gggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaagga 16513423



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/102 (83%), Gaps = 2/102 (1%)
 Strand = Plus / Minus

                                                                            
Query: 472      cggactgcctctgctgcatgtgctgcatcaaaggcgtgcaacaggatgaacgaccagtgc 531
                ||||||||  |||||||||||||| |||| ||  | |||| || ||||||||||| ||||
Sbjct: 16510834 cggactgctgctgctgcatgtgcttcatc-aacacctgcagcaagatgaacgaccggtgc 16510776

                                                          
Query: 532      gccatcatgatggcgcaggtctgcgccgcgcctctcgtgcct 573
                |||||| | |||| |||| | |||| |||| |||||||||||
Sbjct: 16510775 gccatcgtcatggtgcagctgtgcggcgcg-ctctcgtgcct 16510735



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 133      cagcagatcgctcttctcacagcaaaggcatggctttctgcagacaaacaactggaga 190
                |||||||| | ||||||||||||||| |||||| ||| || | |||| ||||| ||||
Sbjct: 16512500 cagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatcaactagaga 16512443
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 45       gggttacttggctgacatgacagagatctcgattgaactgaaggtccagcatataaagga 104
                ||||||||||||||||||||  || || ||||||||| ||| |||||| ||| |||||||
Sbjct: 16507115 gggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaagga 16507056



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/102 (83%), Gaps = 2/102 (1%)
 Strand = Plus / Minus

                                                                            
Query: 472      cggactgcctctgctgcatgtgctgcatcaaaggcgtgcaacaggatgaacgaccagtgc 531
                ||||||||  |||||||||||||| |||| ||  | |||| || ||||||||||| ||||
Sbjct: 16504467 cggactgctgctgctgcatgtgcttcatc-aacacctgcagcaagatgaacgaccggtgc 16504409

                                                          
Query: 532      gccatcatgatggcgcaggtctgcgccgcgcctctcgtgcct 573
                |||||| | |||| |||| | |||| |||| |||||||||||
Sbjct: 16504408 gccatcgtcatggtgcagctgtgcggcgcg-ctctcgtgcct 16504368



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 133      cagcagatcgctcttctcacagcaaaggcatggctttctgcagacaaacaactggaga 190
                |||||||| | ||||||||||||||| |||||| ||| || | |||| ||||| ||||
Sbjct: 16506133 cagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatcaactagaga 16506076
to top
>emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L9 on chromosome 22, complete
             sequence
          Length = 146438

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 260   ccaatttggacgcagcacaaaaa 282
             |||||||||||||||||||||||
Sbjct: 44100 ccaatttggacgcagcacaaaaa 44078
to top
>gb|AF419981.1|AF419981 Drosophila yakuba defective chorion-1 fc125 protein precursor (dec-1)
            mRNA, complete cds, alternatively spliced
          Length = 3898

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 475  actgcctctgctgcatgtgctgcatc 500
            |||||||||||||||| |||||||||
Sbjct: 2175 actgcctctgctgcatctgctgcatc 2150
to top
>gb|AF419980.1|AF419980 Drosophila yakuba defective chorion-1 fc106 protein precursor (dec-1)
            mRNA, complete cds, alternatively spliced
          Length = 3911

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 475  actgcctctgctgcatgtgctgcatc 500
            |||||||||||||||| |||||||||
Sbjct: 2175 actgcctctgctgcatctgctgcatc 2150
to top
>gb|AF419979.1|AF419979 Drosophila yakuba defective chorion-1 fc177 protein precursor (dec-1)
            mRNA, complete cds, alternatively spliced
          Length = 5926

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 475  actgcctctgctgcatgtgctgcatc 500
            |||||||||||||||| |||||||||
Sbjct: 2175 actgcctctgctgcatctgctgcatc 2150
to top
>emb|CR407598.24| Zebrafish DNA sequence from clone CH211-141I4 in linkage group 1,
             complete sequence
          Length = 153682

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   agcatggttgtacttcaaacca 262
             ||||||||||||||||||||||
Sbjct: 30567 agcatggttgtacttcaaacca 30588
to top
>emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 in linkage group 7,
             complete sequence
          Length = 50326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 476   ctgcctctgctgcatgtgctgcatc 500
             |||| ||||||||||||||||||||
Sbjct: 14920 ctgcatctgctgcatgtgctgcatc 14896
to top
>ref|XM_677758.1| PREDICTED: Danio rerio similar to trinucleotide repeat containing 9
            (LOC555286), partial mRNA
          Length = 2115

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 476  ctgcctctgctgcatgtgctgcatc 500
            |||| ||||||||||||||||||||
Sbjct: 1278 ctgcatctgctgcatgtgctgcatc 1254
to top
>gb|AY702083.1| Oikopleura dioica homeodomain protein NK2a (NK2a) gene, partial cds
          Length = 2380

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  agcacaaaaagtcaagcagaa 293
            |||||||||||||||||||||
Sbjct: 1565 agcacaaaaagtcaagcagaa 1545
to top
>gb|AC102638.13| Mus musculus chromosome 3, clone RP23-406D2, complete sequence
          Length = 172817

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 169    tctgcagacaaacaactggagaga 192
              |||||||||| |||||||||||||
Sbjct: 119172 tctgcagacacacaactggagaga 119195
to top
>gb|AC147708.7| Canis Familiaris, clone XX-25G10, complete sequence
          Length = 185084

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aggcaagttccctgagacag 34
              ||||||||||||||||||||
Sbjct: 176408 aggcaagttccctgagacag 176427
to top
>gb|AE006423.1| Lactococcus lactis subsp. lactis IL1403 section 185 of 218 of the
            complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  gtgataaaattaagcataga 215
            ||||||||||||||||||||
Sbjct: 7345 gtgataaaattaagcataga 7326
to top
>gb|AF154094.1| Uncultured hydrocarbon seep bacterium BPC065 16S ribosomal RNA gene,
            partial sequence
          Length = 1521

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  cgattccagcttcatggtct 347
            ||||||||||||||||||||
Sbjct: 1353 cgattccagcttcatggtct 1334
to top
>gb|AY484743.1| Uncultured bacterium clone 99917 16S ribosomal RNA gene, partial
           sequence
          Length = 365

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 cgattccagcttcatggtct 347
           ||||||||||||||||||||
Sbjct: 225 cgattccagcttcatggtct 206
to top
>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 498  atcaaaggcgtgcaacagga 517
            ||||||||||||||||||||
Sbjct: 5707 atcaaaggcgtgcaacagga 5726
to top
>gb|AC122332.4| Mus musculus BAC clone RP23-346G14 from chromosome 10, complete
             sequence
          Length = 214728

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   cagaaaccgaaaggacacaa 308
             ||||||||||||||||||||
Sbjct: 44433 cagaaaccgaaaggacacaa 44452
to top
>gb|AC123041.2| Mus musculus BAC clone RP24-545E4 from 3, complete sequence
          Length = 191533

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 222    tgttctttcagagtacacaagcatggtt 249
              ||||||||||||| |||||||| |||||
Sbjct: 121423 tgttctttcagaggacacaagcttggtt 121396
to top
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     atataaaggacatgcctctt 114
              ||||||||||||||||||||
Sbjct: 144647 atataaaggacatgcctctt 144628
to top
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a
             nove gene, a ribosomal protein large p1 (Rplp1) pseudogene
             and the Cmah gene for CMP-N-Acetylneuraminic acid
             hydroxylase, complete sequence
          Length = 216800

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   ggaaaacctcctcacaggtt 400
             ||||||||||||||||||||
Sbjct: 44863 ggaaaacctcctcacaggtt 44844
to top
>gb|AC091160.6| Homo sapiens chromosome 8, clone CTD-2025J6, complete sequence
          Length = 215326

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aggacatgcctcttgataac 120
              ||||||||||||||||||||
Sbjct: 112124 aggacatgcctcttgataac 112105
to top
>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence
          Length = 227506

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tctttcagagtacacaagca 244
            ||||||||||||||||||||
Sbjct: 6174 tctttcagagtacacaagca 6193
to top
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence
          Length = 173836

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    cctcctcacaggttttggcgagga 410
              |||||||||||||||||| |||||
Sbjct: 128795 cctcctcacaggttttggggagga 128772
to top
>gb|DQ394922.1| Uncultured bacterium clone VHS-B1-47 16S ribosomal RNA gene, partial
            sequence
          Length = 1532

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  cgattccagcttcatggtct 347
            ||||||||||||||||||||
Sbjct: 1365 cgattccagcttcatggtct 1346
to top
>gb|DQ394901.1| Uncultured delta proteobacterium clone VHS-B1-26 16S ribosomal RNA
            gene, partial sequence
          Length = 1513

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  cgattccagcttcatggtct 347
            ||||||||||||||||||||
Sbjct: 1347 cgattccagcttcatggtct 1328
to top
>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence
          Length = 203493

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    tctttcagagtacacaagca 244
              ||||||||||||||||||||
Sbjct: 137270 tctttcagagtacacaagca 137251
to top
>gb|AY169692.1| Gallus gallus adenosine receptor 2B gene, complete cds
          Length = 13531

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 444  ggctgggagggtgctgcagc 463
            ||||||||||||||||||||
Sbjct: 8888 ggctgggagggtgctgcagc 8907
to top
>emb|AJ582703.1|UDE582703 Uncultured Desulfobacteraceae bacterium 16S rRNA gene, clone
           cLaKi-StA81
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 cgattccagcttcatggtct 347
           ||||||||||||||||||||
Sbjct: 971 cgattccagcttcatggtct 952
to top
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 374     ccaccaaggaaaacctcctc 393
               ||||||||||||||||||||
Sbjct: 1533208 ccaccaaggaaaacctcctc 1533189
to top
>gb|AC005242.1|AC005242 Homo sapiens chromosome 17, clone hRPK.118_F_13, complete sequence
          Length = 160262

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 191   gaaaggtgataaaattaagcatagagaa 218
             |||| |||| ||||||||||||||||||
Sbjct: 38328 gaaatgtgagaaaattaagcatagagaa 38355
to top
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   atataaaggacatgcctctt 114
            ||||||||||||||||||||
Sbjct: 4118 atataaaggacatgcctctt 4099
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     accacagcagatcgctcttc 148
               ||||||||||||||||||||
Sbjct: 2577567 accacagcagatcgctcttc 2577548
to top
>gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome 14, complete sequence
          Length = 195329

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 362    gtgacaaagcagccaccaaggaaa 385
              |||||||||||||||| |||||||
Sbjct: 104890 gtgacaaagcagccacaaaggaaa 104867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,187,998
Number of Sequences: 3902068
Number of extensions: 5187998
Number of successful extensions: 113014
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112792
Number of HSP's gapped (non-prelim): 211
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top