ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
2emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 178 9e-42
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 178 9e-42
4dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 9e-42
5gb|AY111696.1| Zea mays CL5853_-1 mRNA sequence 141 2e-30
6ref|XM_493900.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 54 4e-04
9ref|XM_465372.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.087
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
11dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
12emb|AL159990.12| Human DNA sequence from clone RP11-141J10 on ch... 42 1.4
13emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 42 1.4
14ref|NM_123074.1| Arabidopsis thaliana unknown protein AT5G37150 ... 40 5.3
15gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q... 40 5.3
16gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12... 40 5.3
17gb|AY456036.1| Gibberella moniliformis putative phytochrome-like... 40 5.3
18gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Can... 40 5.3
19gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome... 40 5.3
20emb|CR378669.1| Photobacterium profundum SS9; segment 7/12 40 5.3
21gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, compl... 40 5.3
22dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 5.3
23gb|AC027698.5| Homo sapiens chromosome 8, clone RP11-648L3, comp... 40 5.3
24gb|AY944797.1| Rhizopus oryzae strain FSU757 clone 2 beta-tubuli... 40 5.3
25gb|AF297647.2|AF297647 Pseudomonas aeruginosa DNA polymerase III... 40 5.3
26gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 o... 40 5.3
27gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)... 40 5.3
28dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.3
29gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, com... 40 5.3
30gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete... 40 5.3

>dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D01, full
           insert sequence
          Length = 1547

 Score =  186 bits (94), Expect = 4e-44
 Identities = 298/366 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83
           |||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | |||
Sbjct: 431 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 490

                                                                       
Query: 84  gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143
           |||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| 
Sbjct: 491 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgcctcaagaagtca 550

                                                                       
Query: 144 gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203
           ||||| |||||||| |||||| | ||||  |  ||||||||||||||||| |||||||||
Sbjct: 551 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 610

                                                                       
Query: 204 agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263
           |||||||| ||||| ||||  || || |||||||| ||| ||   | || |||||| |||
Sbjct: 611 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 670

                                                                       
Query: 264 gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323
           ||||||  |||||  |  || || |  ||||||  ||||||| | ||| | | ||| |||
Sbjct: 671 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 730

                                                                       
Query: 324 atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383
            |||| |||||||| ||||||||| | ||||| |||||  |  |||||||||||||||||
Sbjct: 731 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 790

                 
Query: 384 gagacc 389
           ||||||
Sbjct: 791 gagacc 796



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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score =  178 bits (90), Expect = 9e-42
 Identities = 297/366 (81%)
 Strand = Plus / Plus

                                                                         
Query: 24    gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83
             |||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | |||
Sbjct: 76967 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 77026

                                                                         
Query: 84    gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143
             |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| 
Sbjct: 77027 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 77086

                                                                         
Query: 144   gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203
             ||||| |||||||| |||||| | ||||  |  ||||||||||||||||| |||||||||
Sbjct: 77087 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 77146

                                                                         
Query: 204   agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263
             |||||||| ||||| ||||  || || |||||||| ||| ||   | || |||||| |||
Sbjct: 77147 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 77206

                                                                         
Query: 264   gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323
             ||||||  |||||  |  || || |  ||||||  ||||||| | ||| | | ||| |||
Sbjct: 77207 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 77266

                                                                         
Query: 324   atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383
              |||| |||||||| ||||||||| | ||||| |||||  |  |||||||||||||||||
Sbjct: 77267 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 77326

                   
Query: 384   gagacc 389
             ||||||
Sbjct: 77327 gagacc 77332



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  178 bits (90), Expect = 9e-42
 Identities = 297/366 (81%)
 Strand = Plus / Plus

                                                                            
Query: 24       gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83
                |||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | |||
Sbjct: 29940215 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 29940274

                                                                            
Query: 84       gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143
                |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| 
Sbjct: 29940275 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 29940334

                                                                            
Query: 144      gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203
                ||||| |||||||| |||||| | ||||  |  ||||||||||||||||| |||||||||
Sbjct: 29940335 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 29940394

                                                                            
Query: 204      agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263
                |||||||| ||||| ||||  || || |||||||| ||| ||   | || |||||| |||
Sbjct: 29940395 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 29940454

                                                                            
Query: 264      gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323
                ||||||  |||||  |  || || |  ||||||  ||||||| | ||| | | ||| |||
Sbjct: 29940455 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 29940514

                                                                            
Query: 324      atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383
                 |||| |||||||| ||||||||| | ||||| |||||  |  |||||||||||||||||
Sbjct: 29940515 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 29940574

                      
Query: 384      gagacc 389
                ||||||
Sbjct: 29940575 gagacc 29940580



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>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full
            insert sequence
          Length = 2570

 Score =  178 bits (90), Expect = 9e-42
 Identities = 297/366 (81%)
 Strand = Plus / Plus

                                                                        
Query: 24   gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83
            |||||||| || ||||| |||||  ||||||| ||||||   |||||||| ||| | |||
Sbjct: 1607 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 1666

                                                                        
Query: 84   gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143
            |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| 
Sbjct: 1667 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 1726

                                                                        
Query: 144  gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203
            ||||| |||||||| |||||| | ||||  |  ||||||||||||||||| |||||||||
Sbjct: 1727 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 1786

                                                                        
Query: 204  agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263
            |||||||| ||||| ||||  || || |||||||| ||| ||   | || |||||| |||
Sbjct: 1787 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 1846

                                                                        
Query: 264  gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323
            ||||||  |||||  |  || || |  ||||||  ||||||| | ||| | | ||| |||
Sbjct: 1847 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 1906

                                                                        
Query: 324  atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383
             |||| |||||||| ||||||||| | ||||| |||||  |  |||||||||||||||||
Sbjct: 1907 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 1966

                  
Query: 384  gagacc 389
            ||||||
Sbjct: 1967 gagacc 1972



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>gb|AY111696.1| Zea mays CL5853_-1 mRNA sequence
          Length = 593

 Score =  141 bits (71), Expect = 2e-30
 Identities = 158/187 (84%)
 Strand = Plus / Minus

                                                                       
Query: 81  aaggagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaag 140
           ||||||| ||||||| |  |||||||||| | |||||||||||| |||||||| | ||| 
Sbjct: 342 aaggagaactatgagctactgcttgatgaggcaaactatgagaaggtttgccttacgaaa 283

                                                                       
Query: 141 tctgttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagag 200
            | ||||||||| |||| |||||||||||||  |    ||||||||||||||| ||||||
Sbjct: 282 gcagttgaaagactggaagcagaagctaagagagcgcatgaggaatggcagtccaaagag 223

                                                                       
Query: 201 ctaagttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaa 260
           ||||||||||||| |||||||| ||| || ||||||||||| ||||||||||  | ||||
Sbjct: 222 ctaagttttgtcagctctattaagaattcagaagaagagatagtcgctgtcagggttcaa 163

                  
Query: 261 atggaca 267
           |||||||
Sbjct: 162 atggaca 156



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>ref|XM_493900.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2688

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 79   ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121
            |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 1655 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 1697



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 79     ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121
              |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 954990 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 954948



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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 79    ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121
             |||||||||| |||||||| ||||||||||| | |||||||||
Sbjct: 45387 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 45345



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>ref|XM_465372.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2169

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 89   ctatgaggtgatgcttgatgaagtaaactatgaga 123
            ||||||||| ||||||||||||| |||||| ||||
Sbjct: 1512 ctatgaggtaatgcttgatgaagcaaactacgaga 1546



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 89       ctatgaggtgatgcttgatgaagtaaactatgaga 123
                ||||||||| ||||||||||||| |||||| ||||
Sbjct: 14175259 ctatgaggtaatgcttgatgaagcaaactacgaga 14175293



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>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1570_H12
          Length = 129767

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 89    ctatgaggtgatgcttgatgaagtaaactatgaga 123
             ||||||||| ||||||||||||| |||||| ||||
Sbjct: 75279 ctatgaggtaatgcttgatgaagcaaactacgaga 75313



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>emb|AL159990.12| Human DNA sequence from clone RP11-141J10 on chromosome 9 Contains the 3'
              end of the TRPM3 gene for transient receptor potential
              cation channel subfamily M, member 3 (MLSN2, LTRPC3,
              FLJ11726) and two novel genes, complete sequence
          Length = 148833

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 288    gaaaaagaagctgaaaatacc 308
              |||||||||||||||||||||
Sbjct: 128723 gaaaaagaagctgaaaatacc 128703



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>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains
             part of the gene for a novel protein similar to axonemal
             dynein heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   aagaagtctgttgaaagaatg 155
             |||||||||||||||||||||
Sbjct: 38082 aagaagtctgttgaaagaatg 38102



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>ref|NM_123074.1| Arabidopsis thaliana unknown protein AT5G37150 mRNA, complete cds
          Length = 2520

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 144  gttgaaagaatggaggcagaagct 167
            |||||||||||||||| |||||||
Sbjct: 1132 gttgaaagaatggaggaagaagct 1155



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>gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q12.1, complete sequence
          Length = 192948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ctcatcaagcaggcaagaga 27
              ||||||||||||||||||||
Sbjct: 177812 ctcatcaagcaggcaagaga 177793



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>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete
            sequence
          Length = 120719

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ctcatcaagcaggcaagaga 27
            ||||||||||||||||||||
Sbjct: 3177 ctcatcaagcaggcaagaga 3158



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>gb|AY456036.1| Gibberella moniliformis putative phytochrome-like histidine kinase
            PHY1p (PHY1) gene, complete cds
          Length = 4465

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  cgaggaagccaaggccgaga 387
            ||||||||||||||||||||
Sbjct: 4414 cgaggaagccaaggccgaga 4433



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>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 207366

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tcaagcaggcaagagattga 31
             ||||||||||||||||||||
Sbjct: 68913 tcaagcaggcaagagattga 68894



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>gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome 6, complete sequence
          Length = 146418

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     atgccaaggagagctatgag 95
              ||||||||||||||||||||
Sbjct: 129745 atgccaaggagagctatgag 129764



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>emb|CR378669.1| Photobacterium profundum SS9; segment 7/12
          Length = 349285

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    aatgaaaaagaagctgaaaa 304
              ||||||||||||||||||||
Sbjct: 343232 aatgaaaaagaagctgaaaa 343251



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>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence
          Length = 120724

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ctcatcaagcaggcaagaga 27
              ||||||||||||||||||||
Sbjct: 117547 ctcatcaagcaggcaagaga 117566



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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915358 aagctcaaatggataagtacttgg 1915335



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915316 aagctcaaatggataagtacttgg 1915293



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915274 aagctcaaatggataagtacttgg 1915251



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915232 aagctcaaatggataagtacttgg 1915209



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915190 aagctcaaatggataagtacttgg 1915167



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915148 aagctcaaatggataagtacttgg 1915125



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915106 aagctcaaatggataagtacttgg 1915083



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915064 aagctcaaatggataagtacttgg 1915041



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1915022 aagctcaaatggataagtacttgg 1914999



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914980 aagctcaaatggataagtacttgg 1914957



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914938 aagctcaaatggataagtacttgg 1914915



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914896 aagctcaaatggataagtacttgg 1914873



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914854 aagctcaaatggataagtacttgg 1914831



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914812 aagctcaaatggataagtacttgg 1914789



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 253     aagctcaaatggacaagtacttgg 276
               ||||||||||||| ||||||||||
Sbjct: 1914728 aagctcaaatggataagtacttgg 1914705



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>gb|AC027698.5| Homo sapiens chromosome 8, clone RP11-648L3, complete sequence
          Length = 97695

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ctcatcaagcaggcaagaga 27
             ||||||||||||||||||||
Sbjct: 29632 ctcatcaagcaggcaagaga 29651



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>gb|AY944797.1| Rhizopus oryzae strain FSU757 clone 2 beta-tubulin (btub) gene,
           partial cds
          Length = 1279

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 aaagaagctgaaaataccga 310
           ||||||||||||||||||||
Sbjct: 437 aaagaagctgaaaataccga 456



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>gb|AF297647.2|AF297647 Pseudomonas aeruginosa DNA polymerase III (dnaE) gene, complete cds
          Length = 3522

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 gcgaggaagccaaggccgag 386
           ||||||||||||||||||||
Sbjct: 434 gcgaggaagccaaggccgag 453



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>gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 of the complete
            genome
          Length = 12469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  gcgaggaagccaaggccgag 386
            ||||||||||||||||||||
Sbjct: 3194 gcgaggaagccaaggccgag 3175



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>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    tgaaaaagaagctgaaaata 306
              ||||||||||||||||||||
Sbjct: 229736 tgaaaaagaagctgaaaata 229755



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>dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJG14
          Length = 86121

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   gttgaaagaatggaggcagaagct 167
             |||||||||||||||| |||||||
Sbjct: 64857 gttgaaagaatggaggaagaagct 64880



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>gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, complete sequence
          Length = 187126

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 268    agtacttggccgtggtgaatgaaa 291
              ||||||||| ||||||||||||||
Sbjct: 119022 agtacttgggcgtggtgaatgaaa 118999



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>gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete sequence
          Length = 215914

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    atgccaaggagagctatgag 95
             ||||||||||||||||||||
Sbjct: 65130 atgccaaggagagctatgag 65149


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,041,154
Number of Sequences: 3902068
Number of extensions: 4041154
Number of successful extensions: 74523
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74404
Number of HSP's gapped (non-prelim): 115
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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