| Clone Name | bags15j21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D01, full insert sequence Length = 1547 Score = 186 bits (94), Expect = 4e-44 Identities = 298/366 (81%) Strand = Plus / Plus Query: 24 gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83 |||||||| || ||||| ||||| ||||||| |||||| |||||||| ||| | ||| Sbjct: 431 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 490 Query: 84 gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143 |||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 491 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgcctcaagaagtca 550 Query: 144 gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203 ||||| |||||||| |||||| | |||| | ||||||||||||||||| ||||||||| Sbjct: 551 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 610 Query: 204 agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263 |||||||| ||||| |||| || || |||||||| ||| || | || |||||| ||| Sbjct: 611 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 670 Query: 264 gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323 |||||| ||||| | || || | |||||| ||||||| | ||| | | ||| ||| Sbjct: 671 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 730 Query: 324 atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383 |||| |||||||| ||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 731 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 790 Query: 384 gagacc 389 |||||| Sbjct: 791 gagacc 796
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 178 bits (90), Expect = 9e-42 Identities = 297/366 (81%) Strand = Plus / Plus Query: 24 gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83 |||||||| || ||||| ||||| ||||||| |||||| |||||||| ||| | ||| Sbjct: 76967 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 77026 Query: 84 gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143 |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| Sbjct: 77027 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 77086 Query: 144 gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203 ||||| |||||||| |||||| | |||| | ||||||||||||||||| ||||||||| Sbjct: 77087 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 77146 Query: 204 agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263 |||||||| ||||| |||| || || |||||||| ||| || | || |||||| ||| Sbjct: 77147 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 77206 Query: 264 gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323 |||||| ||||| | || || | |||||| ||||||| | ||| | | ||| ||| Sbjct: 77207 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 77266 Query: 324 atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383 |||| |||||||| ||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 77267 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 77326 Query: 384 gagacc 389 |||||| Sbjct: 77327 gagacc 77332
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 178 bits (90), Expect = 9e-42 Identities = 297/366 (81%) Strand = Plus / Plus Query: 24 gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83 |||||||| || ||||| ||||| ||||||| |||||| |||||||| ||| | ||| Sbjct: 29940215 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 29940274 Query: 84 gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143 |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| Sbjct: 29940275 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 29940334 Query: 144 gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203 ||||| |||||||| |||||| | |||| | ||||||||||||||||| ||||||||| Sbjct: 29940335 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 29940394 Query: 204 agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263 |||||||| ||||| |||| || || |||||||| ||| || | || |||||| ||| Sbjct: 29940395 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 29940454 Query: 264 gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323 |||||| ||||| | || || | |||||| ||||||| | ||| | | ||| ||| Sbjct: 29940455 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 29940514 Query: 324 atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383 |||| |||||||| ||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 29940515 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 29940574 Query: 384 gagacc 389 |||||| Sbjct: 29940575 gagacc 29940580
>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full insert sequence Length = 2570 Score = 178 bits (90), Expect = 9e-42 Identities = 297/366 (81%) Strand = Plus / Plus Query: 24 gagattgagcgcgctcgggcacaaatagaggaactcaataatagtctgcaaaatgccaag 83 |||||||| || ||||| ||||| ||||||| |||||| |||||||| ||| | ||| Sbjct: 1607 gagattgatcgtgctcgtgcacaggtagaggagctcaatgtaagtctgcagaatacaaag 1666 Query: 84 gagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaagtct 143 |||||||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||| Sbjct: 1667 gagagctatgaggtaatgcttgacgaagcaaactatgaaaaagtttgtctcaagaagtca 1726 Query: 144 gttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagagcta 203 ||||| |||||||| |||||| | |||| | ||||||||||||||||| ||||||||| Sbjct: 1727 gttgagagaatggaagcagaaaccaagagtgcgtctgaggaatggcagtccaaagagcta 1786 Query: 204 agttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaaatg 263 |||||||| ||||| |||| || || |||||||| ||| || | || |||||| ||| Sbjct: 1787 agttttgttaactcaattaaaaaatcagaagaagaaatcatcaacgccagagctcagatg 1846 Query: 264 gacaagtacttggccgtggtgaatgaaaaagaagctgaaaataccgagctgctggaaaag 323 |||||| ||||| | || || | |||||| ||||||| | ||| | | ||| ||| Sbjct: 1847 gacaagaccttggaggctgtaaaaggcaaagaaagtgaaaatgctgagttacaggagaag 1906 Query: 324 atgaatcatcttgaggctcagctagttgaagccaacaaggctagcgaggaagccaaggcc 383 |||| |||||||| ||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 1907 ttgaagcatcttgaagctcagctaatggaagctaacaaaacatgcgaggaagccaaggcc 1966 Query: 384 gagacc 389 |||||| Sbjct: 1967 gagacc 1972
>gb|AY111696.1| Zea mays CL5853_-1 mRNA sequence Length = 593 Score = 141 bits (71), Expect = 2e-30 Identities = 158/187 (84%) Strand = Plus / Minus Query: 81 aaggagagctatgaggtgatgcttgatgaagtaaactatgagaaagtttgcctcaagaag 140 ||||||| ||||||| | |||||||||| | |||||||||||| |||||||| | ||| Sbjct: 342 aaggagaactatgagctactgcttgatgaggcaaactatgagaaggtttgccttacgaaa 283 Query: 141 tctgttgaaagaatggaggcagaagctaagaacgtttctgaggaatggcagtcaaaagag 200 | ||||||||| |||| ||||||||||||| | ||||||||||||||| |||||| Sbjct: 282 gcagttgaaagactggaagcagaagctaagagagcgcatgaggaatggcagtccaaagag 223 Query: 201 ctaagttttgtcaactctattaggaagtcggaagaagagatcgtcgctgtcaaagctcaa 260 ||||||||||||| |||||||| ||| || ||||||||||| |||||||||| | |||| Sbjct: 222 ctaagttttgtcagctctattaagaattcagaagaagagatagtcgctgtcagggttcaa 163 Query: 261 atggaca 267 ||||||| Sbjct: 162 atggaca 156
>ref|XM_493900.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2688 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 79 ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121 |||||||||| |||||||| ||||||||||| | ||||||||| Sbjct: 1655 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 1697
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 79 ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121 |||||||||| |||||||| ||||||||||| | ||||||||| Sbjct: 954990 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 954948
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 79 ccaaggagagctatgaggtgatgcttgatgaagtaaactatga 121 |||||||||| |||||||| ||||||||||| | ||||||||| Sbjct: 45387 ccaaggagagttatgaggtaatgcttgatgaggcaaactatga 45345
>ref|XM_465372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2169 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 ctatgaggtgatgcttgatgaagtaaactatgaga 123 ||||||||| ||||||||||||| |||||| |||| Sbjct: 1512 ctatgaggtaatgcttgatgaagcaaactacgaga 1546
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 ctatgaggtgatgcttgatgaagtaaactatgaga 123 ||||||||| ||||||||||||| |||||| |||| Sbjct: 14175259 ctatgaggtaatgcttgatgaagcaaactacgaga 14175293
>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1570_H12 Length = 129767 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 89 ctatgaggtgatgcttgatgaagtaaactatgaga 123 ||||||||| ||||||||||||| |||||| |||| Sbjct: 75279 ctatgaggtaatgcttgatgaagcaaactacgaga 75313
>emb|AL159990.12| Human DNA sequence from clone RP11-141J10 on chromosome 9 Contains the 3' end of the TRPM3 gene for transient receptor potential cation channel subfamily M, member 3 (MLSN2, LTRPC3, FLJ11726) and two novel genes, complete sequence Length = 148833 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 gaaaaagaagctgaaaatacc 308 ||||||||||||||||||||| Sbjct: 128723 gaaaaagaagctgaaaatacc 128703
>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains part of the gene for a novel protein similar to axonemal dynein heavy polypeptide (DNAH), complete sequence Length = 127451 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 aagaagtctgttgaaagaatg 155 ||||||||||||||||||||| Sbjct: 38082 aagaagtctgttgaaagaatg 38102
>ref|NM_123074.1| Arabidopsis thaliana unknown protein AT5G37150 mRNA, complete cds Length = 2520 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gttgaaagaatggaggcagaagct 167 |||||||||||||||| ||||||| Sbjct: 1132 gttgaaagaatggaggaagaagct 1155
>gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q12.1, complete sequence Length = 192948 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ctcatcaagcaggcaagaga 27 |||||||||||||||||||| Sbjct: 177812 ctcatcaagcaggcaagaga 177793
>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete sequence Length = 120719 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ctcatcaagcaggcaagaga 27 |||||||||||||||||||| Sbjct: 3177 ctcatcaagcaggcaagaga 3158
>gb|AY456036.1| Gibberella moniliformis putative phytochrome-like histidine kinase PHY1p (PHY1) gene, complete cds Length = 4465 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgaggaagccaaggccgaga 387 |||||||||||||||||||| Sbjct: 4414 cgaggaagccaaggccgaga 4433
>gb|AC090001.19| Homo sapiens 12 BAC RP11-536G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207366 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcaagcaggcaagagattga 31 |||||||||||||||||||| Sbjct: 68913 tcaagcaggcaagagattga 68894
>gb|AC124006.4| Mus musculus BAC clone RP24-528C3 from chromosome 6, complete sequence Length = 146418 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atgccaaggagagctatgag 95 |||||||||||||||||||| Sbjct: 129745 atgccaaggagagctatgag 129764
>emb|CR378669.1| Photobacterium profundum SS9; segment 7/12 Length = 349285 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aatgaaaaagaagctgaaaa 304 |||||||||||||||||||| Sbjct: 343232 aatgaaaaagaagctgaaaa 343251
>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence Length = 120724 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcatcaagcaggcaagaga 27 |||||||||||||||||||| Sbjct: 117547 ctcatcaagcaggcaagaga 117566
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915358 aagctcaaatggataagtacttgg 1915335 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915316 aagctcaaatggataagtacttgg 1915293 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915274 aagctcaaatggataagtacttgg 1915251 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915232 aagctcaaatggataagtacttgg 1915209 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915190 aagctcaaatggataagtacttgg 1915167 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915148 aagctcaaatggataagtacttgg 1915125 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915106 aagctcaaatggataagtacttgg 1915083 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915064 aagctcaaatggataagtacttgg 1915041 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1915022 aagctcaaatggataagtacttgg 1914999 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914980 aagctcaaatggataagtacttgg 1914957 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914938 aagctcaaatggataagtacttgg 1914915 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914896 aagctcaaatggataagtacttgg 1914873 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914854 aagctcaaatggataagtacttgg 1914831 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914812 aagctcaaatggataagtacttgg 1914789 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 aagctcaaatggacaagtacttgg 276 ||||||||||||| |||||||||| Sbjct: 1914728 aagctcaaatggataagtacttgg 1914705
>gb|AC027698.5| Homo sapiens chromosome 8, clone RP11-648L3, complete sequence Length = 97695 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctcatcaagcaggcaagaga 27 |||||||||||||||||||| Sbjct: 29632 ctcatcaagcaggcaagaga 29651
>gb|AY944797.1| Rhizopus oryzae strain FSU757 clone 2 beta-tubulin (btub) gene, partial cds Length = 1279 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 aaagaagctgaaaataccga 310 |||||||||||||||||||| Sbjct: 437 aaagaagctgaaaataccga 456
>gb|AF297647.2|AF297647 Pseudomonas aeruginosa DNA polymerase III (dnaE) gene, complete cds Length = 3522 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcgaggaagccaaggccgag 386 |||||||||||||||||||| Sbjct: 434 gcgaggaagccaaggccgag 453
>gb|AE004784.1| Pseudomonas aeruginosa PAO1, section 345 of 529 of the complete genome Length = 12469 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gcgaggaagccaaggccgag 386 |||||||||||||||||||| Sbjct: 3194 gcgaggaagccaaggccgag 3175
>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome Length = 641454 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tgaaaaagaagctgaaaata 306 |||||||||||||||||||| Sbjct: 229736 tgaaaaagaagctgaaaata 229755
>dbj|AB017068.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJG14 Length = 86121 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gttgaaagaatggaggcagaagct 167 |||||||||||||||| ||||||| Sbjct: 64857 gttgaaagaatggaggaagaagct 64880
>gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, complete sequence Length = 187126 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 agtacttggccgtggtgaatgaaa 291 ||||||||| |||||||||||||| Sbjct: 119022 agtacttgggcgtggtgaatgaaa 118999
>gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete sequence Length = 215914 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atgccaaggagagctatgag 95 |||||||||||||||||||| Sbjct: 65130 atgccaaggagagctatgag 65149 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,041,154 Number of Sequences: 3902068 Number of extensions: 4041154 Number of successful extensions: 74523 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74404 Number of HSP's gapped (non-prelim): 115 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)