ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15j07 |
|---|---|
| Clone Library Name | barley_pub |
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 218 bits (555), Expect = 1e-56 Identities = 110/174 (63%), Positives = 133/174 (76%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + +YR KLL +E++ R++ RE LK+ K Y+K+E+DLK+LQSVGQI+GEVL+ L E+ Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 FIVKA++GPRYVVGCR ++DK KL TRV LDMTTLTIMR LPREVDP+VYNM HEDPG Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVSYS +GGLS+QIRELRE IELPL NPELF KGC P GK + Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182 Score = 60.5 bits (145), Expect = 4e-09 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F RVGI PPKG LLYGPPGTGKTLLARA+AS +D Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLD 192
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 218 bits (555), Expect = 1e-56 Identities = 110/174 (63%), Positives = 133/174 (76%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + +YR KLL +E++ R++ RE LK+ K Y+K+E+DLK+LQSVGQI+GEVL+ L E+ Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 FIVKA++GPRYVVGCR ++DK KL TRV LDMTTLTIMR LPREVDP+VYNM HEDPG Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVSYS +GGLS+QIRELRE IELPL NPELF KGC P GK + Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182 Score = 60.5 bits (145), Expect = 4e-09 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F RVGI PPKG LLYGPPGTGKTLLARA+AS +D Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLD 192
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 218 bits (555), Expect = 1e-56 Identities = 110/174 (63%), Positives = 133/174 (76%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + +YR KLL +E++ R++ RE LK+ K Y+K+E+DLK+LQSVGQI+GEVL+ L E+ Sbjct: 9 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 68 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 FIVKA++GPRYVVGCR ++DK KL TRV LDMTTLTIMR LPREVDP+VYNM HEDPG Sbjct: 69 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 128 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVSYS +GGLS+QIRELRE IELPL NPELF KGC P GK + Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182 Score = 60.5 bits (145), Expect = 4e-09 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F RVGI PPKG LLYGPPGTGKTLLARA+AS +D Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLD 192
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 207 bits (526), Expect = 3e-53 Identities = 102/174 (58%), Positives = 129/174 (74%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + YR KL R++E +++ R+ + K +DK+E+D+KSLQSVGQI+GEVL+ L E+ Sbjct: 26 LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEK 85 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 FIVKA++GPRYVVGCR ++KE+L TRV LDMTTLTIMR LPREVDP+VY M HEDPG Sbjct: 86 FIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPG 145 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 N+SYS VGGL++QIRELRE +ELPL+NPELF KGC P GK + Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTL 199 Score = 59.7 bits (143), Expect = 7e-09 Identities = 27/34 (79%), Positives = 30/34 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F RVGI PPKG LL+GPPGTGKTLLARA+AS +D Sbjct: 176 FKRVGITPPKGCLLFGPPGTGKTLLARAVASQLD 209
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 203 bits (517), Expect = 3e-52 Identities = 107/174 (61%), Positives = 129/174 (74%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + +Y++ LL RE +++++ R + K YDKTEDD+KSLQSVGQIIGEVL+ LDSER Sbjct: 8 LEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSER 67 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 FIVKASSGPRYVVGCR+ VD+ L RV LDMTTLTIMR LPREVDP+VYNM EDPG Sbjct: 68 FIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPG 127 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 ++S++ VGGL++QIRELRE IELPL NPELFL KG P GK + Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTL 181 Score = 63.5 bits (153), Expect = 5e-10 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 613 F RVGIKPPKGVLLYGPPGTGKTLLARA+A+++ Sbjct: 158 FLRVGIKPPKGVLLYGPPGTGKTLLARAVAASL 190
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 182 bits (461), Expect = 9e-46 Identities = 88/174 (50%), Positives = 123/174 (70%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 + +++ KLL R + +++ R+N++ +K YDKTE+D+K+LQS+GQ+IGEV++ L E+ Sbjct: 57 LNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEK 116 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +IVKASSGPRY+VG R+ VD+ KL RV LD+TTLTIMR LPRE DP+VYNM + G Sbjct: 117 YIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQG 176 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +++ +GGL++QIRELRE IELPL NPE+F KG P GK + Sbjct: 177 EITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTL 230 Score = 62.8 bits (151), Expect = 8e-10 Identities = 29/35 (82%), Positives = 32/35 (91%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F RVGIKPPKGVLLYGPPGTGKTLLA+A+A+ I A Sbjct: 207 FQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGA 241
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 103 bits (257), Expect(2) = 2e-32 Identities = 54/140 (38%), Positives = 82/140 (58%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R+LE +VR + ++ +++ + ++ L+ G V+ LD +R IV+ +GPR+ Sbjct: 24 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRF 83 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 VV +DK KL TRV LD T+ I+ LP DP V + NV+Y+ +GGL Sbjct: 84 VVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLK 143 Query: 457 DQIRELRESIELPLMNPELF 516 Q++ELRE+IELPL +PELF Sbjct: 144 KQLQELREAIELPLKHPELF 163 Score = 55.5 bits (132), Expect(2) = 2e-32 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VGI PPKGVLLYGPPG GKTL+A+AIA ++A Sbjct: 163 FEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNA 197
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 100 bits (249), Expect(2) = 4e-32 Identities = 53/140 (37%), Positives = 83/140 (59%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R+LE +VRT + ++ +++ + ++ L+ G V+ LD ER IV+ +GPR+ Sbjct: 25 RQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRF 84 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 VV ++++KL RV LD T+ I+ LP E DP V + V+Y+ +GGL Sbjct: 85 VVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLE 144 Query: 457 DQIRELRESIELPLMNPELF 516 Q++ELRE+IELPL +PELF Sbjct: 145 KQLQELREAIELPLKHPELF 164 Score = 57.4 bits (137), Expect(2) = 4e-32 Identities = 24/35 (68%), Positives = 33/35 (94%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +VGI+PPKGVLLYGPPG GKTL+A+A+A++++A Sbjct: 164 FEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNA 198
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 101 bits (252), Expect(2) = 1e-31 Identities = 52/140 (37%), Positives = 83/140 (59%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R+LE +VR + ++ +++ + ++ L+ G V+ LD +R IV+ +GPR+ Sbjct: 27 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRF 86 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 VV +D++KL TRV LD T+ ++ LP DP V + NV+Y+ +GGL Sbjct: 87 VVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLK 146 Query: 457 DQIRELRESIELPLMNPELF 516 Q++ELRE+IELPL +PELF Sbjct: 147 KQLQELREAIELPLKHPELF 166 Score = 54.7 bits (130), Expect(2) = 1e-31 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VGI PPKGVLLYGPPG GKTL+A+A+A ++A Sbjct: 166 FEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNA 200
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 99.0 bits (245), Expect(2) = 8e-31 Identities = 51/140 (36%), Positives = 82/140 (58%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R+LE +VR + ++ +++ + ++ L+ G V+ LD +R IV+ +GPR+ Sbjct: 27 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRF 86 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 VV ++++KL RV LD T+ I+ LP DP V + NV+Y+ +GGL Sbjct: 87 VVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLK 146 Query: 457 DQIRELRESIELPLMNPELF 516 Q++ELRE+IELPL +PELF Sbjct: 147 KQLQELREAIELPLKHPELF 166 Score = 54.7 bits (130), Expect(2) = 8e-31 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VGI PPKGVLLYGPPG GKTL+A+A+A ++A Sbjct: 166 FEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNA 200
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 89.4 bits (220), Expect(2) = 3e-28 Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Frame = +1 Query: 70 EYRNKLLNAR--ELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 E RN L + ++E+ R K +++ K + +L +++ IIG V+ + ++R Sbjct: 35 ESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDR 94 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 IV++S+GP+++V +D++KL +V L+ TL I +P +P V M + Sbjct: 95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESI 154 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V Y +GGL +QI+EL+E++ELPL+ PE F Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLIEPERF 185 Score = 55.5 bits (132), Expect(2) = 3e-28 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI+PPKGVLLYG PGTGKTLLA+A+A +A Sbjct: 185 FARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNA 219
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 89.4 bits (220), Expect(2) = 3e-28 Identities = 49/151 (32%), Positives = 86/151 (56%), Gaps = 2/151 (1%) Frame = +1 Query: 70 EYRNKLLNAR--ELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 E RN L + ++E+ R K +++ K + +L +++ IIG V+ + ++R Sbjct: 35 ESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDR 94 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 IV++S+GP+++V +D++KL +V L+ TL I +P +P V M + Sbjct: 95 IIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESV 154 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V Y +GGL +QI+EL+E++ELPL +PE F Sbjct: 155 EVDYDQIGGLDEQIQELQEAVELPLTSPERF 185 Score = 55.5 bits (132), Expect(2) = 3e-28 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI+PPKGVLLYG PGTGKTLLA+A+A +A Sbjct: 185 FARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNA 219
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 86.3 bits (212), Expect(2) = 3e-26 Identities = 50/152 (32%), Positives = 84/152 (55%) Frame = +1 Query: 61 VITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSE 240 + Y+ R LE R R+ ++ K++ + ++L ++SV I+G+ L P+DS Sbjct: 9 LFVRYKQMERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSS 68 Query: 241 RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDP 420 IV +++G +VV S VD+E L T V L + I+ LP EVD + M + Sbjct: 69 TAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEK 128 Query: 421 GNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 +V+Y VGGL Q +E++E++ELPL+ +L+ Sbjct: 129 PSVTYGDVGGLDVQKQEIKETVELPLLQSDLY 160 Score = 52.0 bits (123), Expect(2) = 3e-26 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+L +A+A++ A Sbjct: 162 QIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKA 194
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 82.8 bits (203), Expect(2) = 1e-25 Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Frame = +1 Query: 160 DKTEDD---LKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLTAATR 330 DKTE+D + L+ +G + +D IV +S GP Y VG S VDK++L Sbjct: 98 DKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCS 157 Query: 331 VVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 510 +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PE Sbjct: 158 ILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPE 217 Query: 511 LF 516 L+ Sbjct: 218 LY 219 Score = 53.1 bits (126), Expect(2) = 1e-25 Identities = 22/32 (68%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GI+PPKGV+LYG PGTGKTLLA+A+A++ A Sbjct: 222 IGIRPPKGVILYGEPGTGKTLLAKAVANSTSA 253
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 84.7 bits (208), Expect(2) = 3e-25 Identities = 48/171 (28%), Positives = 88/171 (51%) Frame = +1 Query: 4 ARGRIWPRPXXXXXXXXXXVITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLK 183 A+G + P + T+Y+ LE + ++ + KK+Y ++++K Sbjct: 18 AKGLPFAGPQTFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK 77 Query: 184 SLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIM 363 +QSV +IG+ L +D IV +++G Y V S +D+E L + V L + ++ Sbjct: 78 RIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALV 137 Query: 364 RTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 LP E D + + ++ +V YS +GG+ Q +E+RE++ELPL + EL+ Sbjct: 138 DVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELY 188 Score = 50.1 bits (118), Expect(2) = 3e-25 Identities = 20/33 (60%), Positives = 28/33 (84%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI+PP+GVL+YGPPG GKT+LA A+A + A Sbjct: 190 QIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTA 222
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 82.0 bits (201), Expect(2) = 5e-25 Identities = 43/130 (33%), Positives = 77/130 (59%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 +E+ K K++ + ++++K +QSV +IG+ L +D IV +++G YVV S +D+ Sbjct: 31 KEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDR 90 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 E L + V L + ++ LP E D + + ++ +VSY+ VGGL Q +E+RE++ Sbjct: 91 ELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAV 150 Query: 487 ELPLMNPELF 516 ELPL +L+ Sbjct: 151 ELPLTQGDLY 160 Score = 52.0 bits (123), Expect(2) = 5e-25 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+L +A+A++ A Sbjct: 162 QIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAA 194
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 81.3 bits (199), Expect(2) = 7e-25 Identities = 41/130 (31%), Positives = 78/130 (60%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 ++ + K++ + ++++K +QSV +IG+ + +D IV++S+G YVV S +D+ Sbjct: 63 KDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDR 122 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 EKL ++ V L + ++ LP E D + + + +V+Y+ VGGL Q +E+RE++ Sbjct: 123 EKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAV 182 Query: 487 ELPLMNPELF 516 ELPL +L+ Sbjct: 183 ELPLTQFDLY 192 Score = 52.4 bits (124), Expect(2) = 7e-25 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+L +A+A++ A Sbjct: 194 QIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTA 226
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 80.1 bits (196), Expect(2) = 9e-25 Identities = 48/138 (34%), Positives = 75/138 (54%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 LE + E LK +K ++ + L+ ++ IG + +D + IV + + P Y V Sbjct: 71 LEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYV 130 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S VDKE L V+L T++I+ L + DP+V M + SYS +GGL Q Sbjct: 131 SILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQ 190 Query: 463 IRELRESIELPLMNPELF 516 I+E++ES+ELPL +PEL+ Sbjct: 191 IQEIKESVELPLTHPELY 208 Score = 53.1 bits (126), Expect(2) = 9e-25 Identities = 23/32 (71%), Positives = 28/32 (87%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYG PGTGKTLLA+A+A+ A Sbjct: 211 MGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 242
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 80.1 bits (196), Expect(2) = 1e-24 Identities = 41/130 (31%), Positives = 77/130 (59%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 ++ + K++ + ++++K +QSV +IG+ L P+D IV +++G YVV S +D+ Sbjct: 69 KDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDR 128 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 E L + V L + ++ LP + D + M + +V+Y+ VGGL Q +E+RE++ Sbjct: 129 ELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAV 188 Query: 487 ELPLMNPELF 516 ELPL+ +L+ Sbjct: 189 ELPLVQADLY 198 Score = 52.4 bits (124), Expect(2) = 1e-24 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+L +A+A++ A Sbjct: 200 QIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKA 232
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 78.2 bits (191), Expect(2) = 3e-24 Identities = 38/130 (29%), Positives = 77/130 (59%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 ++ LK ++++ + ++++K +QSV +IG+ + +D IV +++G Y V S +++ Sbjct: 57 KDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINR 116 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 E L + V LD + ++ LP E D + + + +V+Y+ +GG Q +E+RE++ Sbjct: 117 ELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 176 Query: 487 ELPLMNPELF 516 ELPL + EL+ Sbjct: 177 ELPLTHHELY 186 Score = 53.1 bits (126), Expect(2) = 3e-24 Identities = 22/33 (66%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+LA+A+A + A Sbjct: 188 QIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTA 220
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 77.0 bits (188), Expect(2) = 1e-23 Identities = 44/151 (29%), Positives = 82/151 (54%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 +T +L + + +E ++ NL+K + ++++K +QSV +IG+ L +D Sbjct: 40 LTTLERQLAHLQVMEDYIKLETRNLEK---ELLHAQEEVKRIQSVPLVIGQFLEAVDQNH 96 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 IV +++G Y V S +D+E L V L + ++ LP E D + + ++ Sbjct: 97 AIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKP 156 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++SY +GGL Q +E+RE++ELPL + EL+ Sbjct: 157 DISYGDIGGLDMQKQEVREAVELPLTHGELY 187 Score = 52.4 bits (124), Expect(2) = 1e-23 Identities = 21/33 (63%), Positives = 29/33 (87%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVL+YGPPG GKT+LA+A+A+N A Sbjct: 189 QIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAA 221
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 74.7 bits (182), Expect(2) = 2e-23 Identities = 38/130 (29%), Positives = 74/130 (56%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 ++ K K++ + ++++K +QSV +IG+ + +D IV +++G Y V S +++ Sbjct: 52 KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 111 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 E L + V L + ++ LP E D + + + +VSY+ +GG Q +E+RE++ Sbjct: 112 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 171 Query: 487 ELPLMNPELF 516 ELPL + EL+ Sbjct: 172 ELPLTHHELY 181 Score = 53.9 bits (128), Expect(2) = 2e-23 Identities = 22/33 (66%), Positives = 30/33 (90%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVLLYGPPGTGKT+LA+A+A++ A Sbjct: 183 QIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTA 215
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 72.4 bits (176), Expect(2) = 4e-23 Identities = 40/126 (31%), Positives = 74/126 (58%) Frame = +1 Query: 139 KKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLT 318 K K++ ++++K ++SV +IG++L +DS IV+++SG V S +D+E L Sbjct: 51 KNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLK 110 Query: 319 AATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPL 498 + V L + ++ TLP E D ++ + ++ + SYS +GG Q +E+RE++ELPL Sbjct: 111 PSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPL 170 Query: 499 MNPELF 516 + L+ Sbjct: 171 THHNLY 176 Score = 55.5 bits (132), Expect(2) = 4e-23 Identities = 23/37 (62%), Positives = 31/37 (83%) Frame = +2 Query: 509 NCFFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 N + ++GI PP+GVLLYGPPGTGKT+LA+A+A + A Sbjct: 174 NLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSA 210
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 77.4 bits (189), Expect(2) = 5e-23 Identities = 41/138 (29%), Positives = 76/138 (55%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 LE + ++ K KK++ ++++K +QS+ +IG+ L +D IV +++G Y V Sbjct: 54 LEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q Sbjct: 114 RILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQ 173 Query: 463 IRELRESIELPLMNPELF 516 +E+RE++ELPL + EL+ Sbjct: 174 KQEVREAVELPLTHFELY 191 Score = 50.1 bits (118), Expect(2) = 5e-23 Identities = 20/33 (60%), Positives = 28/33 (84%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVL+YGPPG GKT+LA+A+A + A Sbjct: 193 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 77.4 bits (189), Expect(2) = 5e-23 Identities = 41/138 (29%), Positives = 76/138 (55%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 LE + ++ K KK++ ++++K +QS+ +IG+ L +D IV +++G Y V Sbjct: 54 LEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q Sbjct: 114 RILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQ 173 Query: 463 IRELRESIELPLMNPELF 516 +E+RE++ELPL + EL+ Sbjct: 174 KQEVREAVELPLTHFELY 191 Score = 50.1 bits (118), Expect(2) = 5e-23 Identities = 20/33 (60%), Positives = 28/33 (84%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVL+YGPPG GKT+LA+A+A + A Sbjct: 193 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 75.1 bits (183), Expect(2) = 2e-22 Identities = 40/138 (28%), Positives = 75/138 (54%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 LE + ++ K KK++ ++++K +QS+ +IG+ L +D IV +++G Y V Sbjct: 54 LEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYV 113 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S +D+E L V L + ++ LP D + + + +V Y+ +GG+ Q Sbjct: 114 RMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQ 173 Query: 463 IRELRESIELPLMNPELF 516 +E+RE++ELPL + EL+ Sbjct: 174 KQEVREAVELPLTHFELY 191 Score = 50.1 bits (118), Expect(2) = 2e-22 Identities = 20/33 (60%), Positives = 28/33 (84%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI PP+GVL+YGPPG GKT+LA+A+A + A Sbjct: 193 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 225
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 71.2 bits (173), Expect(2) = 4e-22 Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 6/156 (3%) Frame = +1 Query: 67 TEYRNKLLNARELETRVRTGRE---NLKKAKKDYDKTEDD---LKSLQSVGQIIGEVLRP 228 T R +LL + + + E N ++ K ++T+++ + ++ +G + Sbjct: 63 TRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEI 122 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 +D + IV +++GP Y V S VDK+ L V+L ++I+ L + DP++ M Sbjct: 123 IDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMK 181 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 + SY+ +GGL QI+E++E++ELPL +PEL+ Sbjct: 182 LDKAPTESYADIGGLESQIQEIKEAVELPLTHPELY 217 Score = 53.1 bits (126), Expect(2) = 4e-22 Identities = 23/32 (71%), Positives = 28/32 (87%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYG PGTGKTLLA+A+A+ A Sbjct: 220 MGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 251
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 71.2 bits (173), Expect(2) = 1e-21 Identities = 40/138 (28%), Positives = 70/138 (50%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 +E +E LK ++ ++ + L+ +G + +D + IV + G + V Sbjct: 77 MEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYV 136 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S VDKE+L V+L+ ++ L + DP+V M E +Y+ VGGL Q Sbjct: 137 NIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQ 196 Query: 463 IRELRESIELPLMNPELF 516 I+E++E++ELPL +PE + Sbjct: 197 IQEIKEAVELPLTHPEYY 214 Score = 51.2 bits (121), Expect(2) = 1e-21 Identities = 22/32 (68%), Positives = 28/32 (87%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GI+PPKGV+LYG PGTGKTLLA+A+A+ A Sbjct: 217 MGIRPPKGVILYGCPGTGKTLLAKAVANQTSA 248
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 100 bits (248), Expect = 4e-21 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 4/167 (2%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKS----LQSVGQIIGEVLRPLDSERFIVKASS 264 REL R+ ++ ++ + Y++ L+S L+S ++G V L+ R +VK+S+ Sbjct: 24 RELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSST 83 Query: 265 GPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAV 444 GP++VV +++E+L RV L+ TL I+ LP DP+VY E+ VSY + Sbjct: 84 GPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDI 143 Query: 445 GGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 GGL QI E+RE++ELPL+ PELF KG P GK + Sbjct: 144 GGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTL 190 Score = 57.4 bits (137), Expect = 3e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VGI+PPKGVLLYGPPGTGKTLLA+A+A+ A Sbjct: 167 FAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRA 201
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 96.3 bits (238), Expect = 6e-20 Identities = 54/170 (31%), Positives = 87/170 (51%) Frame = +1 Query: 76 RNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVK 255 RN + R+LE + ++ +++ ++ +I V LD R VK Sbjct: 31 RNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVK 90 Query: 256 ASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSY 435 +++GP +V+ +D+++L RV L+ T +I+ LP E DPVV M E+ +VSY Sbjct: 91 STTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSY 150 Query: 436 SAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +GGL +Q+RE++E++ELPL PELF KG P GK + Sbjct: 151 EQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTL 200 Score = 57.8 bits (138), Expect = 3e-08 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI+PPKGVLLYGPPGTGKTLLA+A+A +A Sbjct: 177 FEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNA 211
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 95.5 bits (236), Expect = 1e-19 Identities = 56/161 (34%), Positives = 89/161 (55%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R LE ++++ + ++ +K+ + + +++ + S I VL L R +V++SSGP Sbjct: 21 RLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNL 80 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 VV S +D++ + V L+ TI+ LP++ DP+V M + NV+YS +GGL Sbjct: 81 VVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLE 140 Query: 457 DQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGK 579 +QIRELRE +ELPL NPE+F KG P GK Sbjct: 141 EQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGK 181 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G++PPKGVLLYGPPGTGKT+LA+A+A+ +A Sbjct: 160 FREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNA 194
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 93.6 bits (231), Expect = 4e-19 Identities = 54/153 (35%), Positives = 81/153 (52%) Frame = +1 Query: 127 RENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDK 306 RE L++ + +K DL+ ++ I+G V LD R IVK+S+GP++V VD+ Sbjct: 76 REELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDR 135 Query: 307 EKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESI 486 +L V L+ ++ ++ LP E D V M ++ +VSY +GGL +QIRE+RE + Sbjct: 136 NELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVV 195 Query: 487 ELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E PL PELF KG P GK + Sbjct: 196 EKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTL 228 Score = 60.8 bits (146), Expect = 3e-09 Identities = 26/35 (74%), Positives = 33/35 (94%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +VG++PPKGVLLYGPPGTGKTLLA+A+A++ DA Sbjct: 205 FEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADA 239
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 93.2 bits (230), Expect = 5e-19 Identities = 59/174 (33%), Positives = 96/174 (55%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 I E +K+L EL+ + REN++ KK+ + + +L L+ I+G +L ++ + Sbjct: 27 IAELESKVLRL-ELKNK-DINRENVQ-IKKENEILKRELDKLRIPPLILGTILDKVNERK 83 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK+S+GP ++V VD E + RV L+ TL I+ LP+E D M E+ Sbjct: 84 AVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKP 143 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 ++S+ +GGL++QIR+++E +ELPL NPELF KG P GK + Sbjct: 144 DISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTL 197 Score = 56.6 bits (135), Expect = 6e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +VGI PPKGVLLYGPPGTGKTLLA+A+A +A Sbjct: 174 FEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNA 208
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 92.4 bits (228), Expect = 9e-19 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 7/169 (4%) Frame = +1 Query: 100 ELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSERFIVKA 258 EL+ V +NL++ + ++ ++L+ LQ G +GEV++P+D ++ +VK Sbjct: 26 ELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 85 Query: 259 SSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYS 438 ++VV VD +TA RV L + T+ + LP +VDP+V M+ E + +Y Sbjct: 86 HPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYE 145 Query: 439 AVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VGGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 146 MVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 194 Score = 52.4 bits (124), Expect = 1e-06 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + + Sbjct: 171 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 204
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 91.7 bits (226), Expect = 2e-18 Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 5/179 (2%) Frame = +1 Query: 64 ITEYRNKLLNA-----RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRP 228 + YR K N+ R LE ++ + + L+K ++D + + +L+ L + I VL Sbjct: 5 LDSYRAKHYNSDDPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDI 64 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 L + IV++SSGP +V S +D +KL + V L TI+ LP D V + Sbjct: 65 LPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFE 124 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + NV YS +GGL++QI E+RE IELPL NPELF KG P GK + Sbjct: 125 VIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTL 183 Score = 56.6 bits (135), Expect = 6e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI PPKGVLLYGPPGTGKTLLA+A+A+ +A Sbjct: 160 FKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNA 194
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 90.5 bits (223), Expect = 4e-18 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 7/169 (4%) Frame = +1 Query: 100 ELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSERFIVKA 258 EL+ V +NL++ + ++ ++L+ LQ G +GEV++P+D ++ +VK Sbjct: 29 ELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKV 88 Query: 259 SSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYS 438 ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y Sbjct: 89 HPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYE 148 Query: 439 AVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VGGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 149 MVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 197 Score = 52.4 bits (124), Expect = 1e-06 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + + Sbjct: 174 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 207
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 89.7 bits (221), Expect = 6e-18 Identities = 52/170 (30%), Positives = 89/170 (52%) Frame = +1 Query: 76 RNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVK 255 R+K+ N R L+ + ++ K ++L+ LQ G +GEV++ + ++ ++K Sbjct: 43 RDKIENLRRLQAQRNELNGRVRSLK-------EELQQLQEPGSHVGEVVKVMGKKKVLIK 95 Query: 256 ASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSY 435 S +Y+V ++ + LT RV L + + + LP ++DP+V M E + +Y Sbjct: 96 ISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATY 155 Query: 436 SAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VGGL +QI+E++E IELP+ +PELF S KG P GK + Sbjct: 156 EMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205 Score = 52.4 bits (124), Expect = 1e-06 Identities = 23/34 (67%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGV++YGPPGTGKTLLARA+A + D Sbjct: 182 FESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTD 215
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 89.0 bits (219), Expect = 1e-17 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L EL+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 25 LSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 89.0 bits (219), Expect = 1e-17 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L EL+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 25 LSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 89.0 bits (219), Expect = 1e-17 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L EL+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 25 LSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 89.0 bits (219), Expect = 1e-17 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L EL+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 25 LSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 89.0 bits (219), Expect = 1e-17 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L EL+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 25 LSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 85 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 144 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PELF + KG P GK + Sbjct: 145 DSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 208
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 87.8 bits (216), Expect = 2e-17 Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDY----DKT---EDDLKSLQSVGQIIGEVLRPLDSERFIVK 255 +E E ++R+ EN+++ + DK +D+L+ LQ G +GEV++ + ++ +VK Sbjct: 28 QETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVK 87 Query: 256 ASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSY 435 +Y+V ++ + L A+ RV L + + + L + DP+V M+ E + +Y Sbjct: 88 VQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTY 147 Query: 436 SAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VGGL+ QI+E++E IELP+ +PELF S KG P GK + Sbjct: 148 DMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197 Score = 53.1 bits (126), Expect = 6e-07 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGV+LYGPPGTGKTLLARA+A + D Sbjct: 174 FESLGIAQPKGVILYGPPGTGKTLLARAVAHHTD 207
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 55.8 bits (133), Expect(2) = 2e-17 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VGI PP GVLL+GPPGTGKTL+A+A+AS DA Sbjct: 175 FETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDA 209 Score = 52.4 bits (124), Expect(2) = 2e-17 Identities = 39/149 (26%), Positives = 71/149 (47%) Frame = +1 Query: 70 EYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFI 249 E R++LL+A + + E L K ++ + ++Q L E + Sbjct: 39 EERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQE-----------LTDEGAV 87 Query: 250 VKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNV 429 +K + + + + L +RV ++ +L+++R L E D M +D +V Sbjct: 88 IKQHGNNQEALTEVTDELRATLEPGSRVAVN-NSLSVVRQLDDEADVRARVMEVDDSPDV 146 Query: 430 SYSAVGGLSDQIRELRESIELPLMNPELF 516 Y +GGL DQ+RE+RE++ELP+ +P LF Sbjct: 147 GYEDIGGLDDQLREVRETVELPMKDPGLF 175
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 54.7 bits (130), Expect(2) = 4e-17 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VG++PP GVLL+GPPGTGKT+LA+A+A+ DA Sbjct: 178 FDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDA 212 Score = 52.8 bits (125), Expect(2) = 4e-17 Identities = 33/139 (23%), Positives = 72/139 (51%) Frame = +1 Query: 100 ELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYV 279 EL+ ++ ++ +++ ++ + + ++L++ + V + ++K + V Sbjct: 41 ELQAQLDDVEARREELREEVNRLQRENETLKTASLYLATVEDLPEDGSAVIKQHGNNQEV 100 Query: 280 VGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSD 459 + S + L RV ++ + ++ R L E D M ++ +V+Y+ +GGL D Sbjct: 101 LTELSPRLADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDD 159 Query: 460 QIRELRESIELPLMNPELF 516 Q+RE+RE++E PL+NPE F Sbjct: 160 QLREVREAVEDPLVNPEKF 178
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 86.7 bits (213), Expect = 5e-17 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 7/169 (4%) Frame = +1 Query: 100 ELETRVRTGRENLKKAKKDYDKT-------EDDLKSLQSVGQIIGEVLRPLDSERFIVKA 258 ELE +V ++L++ + ++ +++L+ L + G + EV++ + + +VK Sbjct: 12 ELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKV 71 Query: 259 SSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYS 438 + ++VV VD KLT +TR L + T+ R LP ++DP+V M E + +Y Sbjct: 72 NPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYD 131 Query: 439 AVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VGGL QI+E++E IELP+ +PELF S KG P GK + Sbjct: 132 MVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 180 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 157 FESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 190
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 85.1 bits (209), Expect = 1e-16 Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%) Frame = +1 Query: 85 LLNARELETRVRTGRENLKKAKKDYDKTE-------DDLKSLQSVGQIIGEVLRPLDSER 243 L +L+ V +NL++ + ++ ++L+ LQ G +GEV+R +D ++ Sbjct: 20 LSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 79 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E Sbjct: 80 VLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVP 139 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + +Y +GGL QI+E++E IELP+ +PE F + KG P GK + Sbjct: 140 DSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTL 193 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/34 (73%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKGVLLYGPPGTGKTLLARA+A + D Sbjct: 170 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 203
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 83.2 bits (204), Expect = 6e-16 Identities = 46/138 (33%), Positives = 76/138 (55%) Frame = +1 Query: 172 DDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTT 351 ++++ LQ G +GEV++ + + +VK +YVV +D +++ RV L + Sbjct: 57 EEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDS 116 Query: 352 LTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD 531 +++ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF S Sbjct: 117 YQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGI 176 Query: 532 *TTKGCSALWPTWNGKDI 585 KG P GK + Sbjct: 177 PQPKGILLYGPPGTGKTL 194 Score = 53.5 bits (127), Expect = 5e-07 Identities = 24/34 (70%), Positives = 28/34 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +GI PKG+LLYGPPGTGKTLLARA+A + D Sbjct: 171 FESLGIPQPKGILLYGPPGTGKTLLARAVAHHTD 204
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 82.0 bits (201), Expect = 1e-15 Identities = 53/163 (32%), Positives = 81/163 (49%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRY 276 R L+ +VR+ + +K+ + ++++ L S I VL +D R +VK+S+GP Sbjct: 26 RILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNL 85 Query: 277 VVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLS 456 +V + VD L V L+ TI+ LP DP+V M E+ V + VGGL Sbjct: 86 IVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLE 145 Query: 457 DQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +QIRE+ E++ LP+ NP LF KG P GK + Sbjct: 146 EQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTL 188 Score = 54.3 bits (129), Expect = 3e-07 Identities = 24/35 (68%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI PPKGVLL+GPPGTGKTLLA+A+A +A Sbjct: 165 FRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEA 199
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 81.6 bits (200), Expect = 2e-15 Identities = 56/174 (32%), Positives = 90/174 (51%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSER 243 I E +++L ELE + RENL+ K++ + +L ++ I+G V+ + + Sbjct: 49 IAELESRILKL-ELEKK-ELERENLQLMKEN-EILRRELDRMRVPPLIVGTVVDKVGERK 105 Query: 244 FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPG 423 +VK+S+GP ++V V+ + L RV L+ TLT++ LP D M ++ Sbjct: 106 VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERP 165 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NV Y +GGL Q++E+RE +ELPL +PELF KG P GK + Sbjct: 166 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTL 219 Score = 58.5 bits (140), Expect = 1e-08 Identities = 25/35 (71%), Positives = 32/35 (91%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +VGI+PPKG+LLYGPPGTGKTLLA+A+A+ +A Sbjct: 196 FEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNA 230
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 55.8 bits (133), Expect(2) = 2e-11 Identities = 23/35 (65%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+G++PP GVLLYGPPGTGKTL+A+A+A+ +A Sbjct: 488 FTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNA 522 Score = 53.9 bits (128), Expect(2) = 6e-13 Identities = 23/35 (65%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI+PP+GVLL+GPPGTGKTLLA+A+A+ A Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSA 249 Score = 39.3 bits (90), Expect(2) = 6e-13 Identities = 13/32 (40%), Positives = 25/32 (78%) Frame = +1 Query: 421 GNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 G ++Y +GGL ++I+ +RE +ELP+ +P++F Sbjct: 184 GGITYEDIGGLENEIQRVREMVELPMKHPQIF 215 Score = 32.3 bits (72), Expect(2) = 2e-11 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 EV+P + + +++ VGGL++ ++ES+E PL PE F Sbjct: 443 EVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKF 488
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 72.0 bits (175), Expect = 1e-12 Identities = 45/161 (27%), Positives = 74/161 (45%) Frame = +1 Query: 103 LETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVV 282 +E +E LK + ++ + L+ +G + +D IV S G + V Sbjct: 73 MEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYV 132 Query: 283 GCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQ 462 S VDK++L V+L+ ++ L + DP+V M E +Y+ +GGL Q Sbjct: 133 SILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQ 192 Query: 463 IRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 I+E++ES+ELPL +PE + KG P GK + Sbjct: 193 IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 233 Score = 56.2 bits (134), Expect = 7e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A Sbjct: 213 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 244
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.0 bits (175), Expect = 1e-12 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 6/179 (3%) Frame = +1 Query: 67 TEYRNKLLNAREL------ETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRP 228 T+ R KLL + E +E +K ++ ++ + L+ +G + Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEI 115 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 +D IV S G + V S VDK+ L V+L+ ++ L + DP+V M Sbjct: 116 IDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMK 175 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E +Y+ +GGL +QI+E++ES+ELPL +PE + KG P GK + Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234 Score = 56.2 bits (134), Expect = 7e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.0 bits (175), Expect = 1e-12 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 6/179 (3%) Frame = +1 Query: 67 TEYRNKLLNAREL------ETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRP 228 T+ R KLL + E +E +K ++ ++ + L+ +G + Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEI 115 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 +D IV S G + V S VDK+ L V+L+ ++ L + DP+V M Sbjct: 116 IDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMK 175 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E +Y+ +GGL +QI+E++ES+ELPL +PE + KG P GK + Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234 Score = 56.2 bits (134), Expect = 7e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.0 bits (175), Expect = 1e-12 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 6/179 (3%) Frame = +1 Query: 67 TEYRNKLLNAREL------ETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRP 228 T+ R KLL + E +E +K ++ ++ + L+ +G + Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEI 115 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 +D IV S G + V S VDK+ L V+L+ ++ L + DP+V M Sbjct: 116 IDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMK 175 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E +Y+ +GGL +QI+E++ES+ELPL +PE + KG P GK + Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234 Score = 56.2 bits (134), Expect = 7e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.0 bits (175), Expect = 1e-12 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 6/179 (3%) Frame = +1 Query: 67 TEYRNKLLNAREL------ETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRP 228 T+ R KLL + E +E +K ++ ++ + L+ +G + Sbjct: 56 TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEI 115 Query: 229 LDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNML 408 +D IV S G + V S VDK+ L V+L+ ++ L + DP+V M Sbjct: 116 IDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMK 175 Query: 409 HEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E +Y+ +GGL +QI+E++ES+ELPL +PE + KG P GK + Sbjct: 176 LEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234 Score = 56.2 bits (134), Expect = 7e-08 Identities = 24/32 (75%), Positives = 29/32 (90%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +GIKPPKGV+LYGPPGTGKTLLA+A+A+ A Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSA 245
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 49.3 bits (116), Expect(2) = 3e-12 Identities = 19/28 (67%), Positives = 27/28 (96%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNI 613 ++PPKGVLLYGPPG GKTL+A+A+A+++ Sbjct: 283 LRPPKGVLLYGPPGCGKTLIAKAVANSL 310 Score = 41.6 bits (96), Expect(2) = 3e-12 Identities = 17/41 (41%), Positives = 32/41 (78%) Frame = +1 Query: 394 VYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V +++ E+ +VSY+ +GGLS QI ++R+++ELP ++ EL+ Sbjct: 238 VEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELY 278
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 49.3 bits (116), Expect(2) = 3e-12 Identities = 19/28 (67%), Positives = 27/28 (96%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNI 613 ++PPKGVLLYGPPG GKTL+A+A+A+++ Sbjct: 283 LRPPKGVLLYGPPGCGKTLIAKAVANSL 310 Score = 41.6 bits (96), Expect(2) = 3e-12 Identities = 17/41 (41%), Positives = 32/41 (78%) Frame = +1 Query: 394 VYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V +++ E+ +VSY+ +GGLS QI ++R+++ELP ++ EL+ Sbjct: 238 VEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELY 278
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 70.1 bits (170), Expect = 5e-12 Identities = 45/155 (29%), Positives = 69/155 (44%) Frame = +1 Query: 121 TGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKV 300 +G N ++ D EDD + ++++ ++VVG +V Sbjct: 122 SGNSNSNSNQQSTDADEDD------------------EDAKYVINLKQIAKFVVGLGERV 163 Query: 301 DKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRE 480 + RV +D + I LP +DP V M E+ +V+YS VGG DQI +LRE Sbjct: 164 SPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLRE 223 Query: 481 SIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +ELPL++PE F + KG P GK + Sbjct: 224 VVELPLLSPERFATLGIDPPKGILLYGPPGTGKTL 258 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI PPKG+LLYGPPGTGKTL ARA+A+ DA Sbjct: 235 FATLGIDPPKGILLYGPPGTGKTLCARAVANRTDA 269
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 69.3 bits (168), Expect = 8e-12 Identities = 37/118 (31%), Positives = 60/118 (50%) Frame = +1 Query: 232 DSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLH 411 D ++++ ++VVG KV + RV +D I LP ++DP V M Sbjct: 100 DDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+ KG P GK + Sbjct: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI PPKGVL YGPPGTGKTLLARA+A+ DA Sbjct: 194 FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 49.3 bits (116), Expect(2) = 8e-12 Identities = 19/28 (67%), Positives = 27/28 (96%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNI 613 ++PPKGVLLYGPPG GKTL+A+A+A+++ Sbjct: 283 LRPPKGVLLYGPPGCGKTLIAKAVANSL 310 Score = 40.0 bits (92), Expect(2) = 8e-12 Identities = 16/41 (39%), Positives = 31/41 (75%) Frame = +1 Query: 394 VYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V +++ E+ +VSY +GGL+ QI ++R+++ELP ++ EL+ Sbjct: 238 VEDLVLEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELY 278
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 48.5 bits (114), Expect(2) = 2e-11 Identities = 19/35 (54%), Positives = 27/35 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F G+ PP+G+LL+GPPGTGKT+L R +A+ +A Sbjct: 271 FSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNA 305 Score = 47.4 bits (111), Expect(2) = 1e-06 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F R+GI PKGVLLYGPPG KTL A+A+A+ Sbjct: 542 FARLGISAPKGVLLYGPPGCSKTLTAKALAT 572 Score = 39.7 bits (91), Expect(2) = 2e-11 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = +1 Query: 400 NMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 N + P +SY+AVGGL +I L+ +IE+PL P LF S Sbjct: 233 NRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSS 273 Score = 24.6 bits (52), Expect(2) = 1e-06 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +1 Query: 349 TLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 TL + + ++ P + + V +S +GG + +++E I+LPL E F Sbjct: 487 TLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 67.8 bits (164), Expect = 2e-11 Identities = 36/118 (30%), Positives = 60/118 (50%) Frame = +1 Query: 232 DSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLH 411 + ++++ ++VVG KV + RV +D I LP ++DP V M Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+ KG P GK + Sbjct: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI PPKGVL YGPPGTGKTLLARA+A+ DA Sbjct: 194 FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 67.8 bits (164), Expect = 2e-11 Identities = 36/118 (30%), Positives = 60/118 (50%) Frame = +1 Query: 232 DSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLH 411 + ++++ ++VVG KV + RV +D I LP ++DP V M Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+ KG P GK + Sbjct: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI PPKGVL YGPPGTGKTLLARA+A+ DA Sbjct: 194 FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 67.8 bits (164), Expect = 2e-11 Identities = 36/118 (30%), Positives = 60/118 (50%) Frame = +1 Query: 232 DSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLH 411 + ++++ ++VVG KV + RV +D I LP ++DP V M Sbjct: 99 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 158 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+ KG P GK + Sbjct: 159 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 216 Score = 58.9 bits (141), Expect = 1e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI PPKGVL YGPPGTGKTLLARA+A+ DA Sbjct: 193 FVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 227
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 45.4 bits (106), Expect(2) = 1e-10 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI PKGVL++G PGTGKT +A+AIA+ +A Sbjct: 553 FMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNA 587 Score = 42.7 bits (99), Expect = 8e-04 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIASNIDA 619 KG+LLYGPPG GKTLLA+AIA+ A Sbjct: 969 KGILLYGPPGCGKTLLAKAIANECKA 994 Score = 40.0 bits (92), Expect(2) = 1e-10 Identities = 16/37 (43%), Positives = 27/37 (72%) Frame = +1 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 E+ +++Y +GG+ Q+ ++RE IELPL PE+F+S Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMS 555
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 65.1 bits (157), Expect = 2e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +1 Query: 232 DSE--RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNM 405 DSE ++I+ ++VV +V + RV +D I LP ++DP V M Sbjct: 104 DSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM 163 Query: 406 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+YS VGG +QI +LRE +E PL++PE F++ KG P GK + Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA Sbjct: 200 FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 234
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 65.1 bits (157), Expect = 2e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +1 Query: 232 DSE--RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNM 405 DSE ++I+ ++VV +V + RV +D I LP ++DP V M Sbjct: 104 DSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM 163 Query: 406 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+YS VGG +QI +LRE +E PL++PE F++ KG P GK + Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA Sbjct: 200 FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 234
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 65.1 bits (157), Expect = 2e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +1 Query: 232 DSE--RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNM 405 DSE ++I+ ++VV +V + RV +D I LP ++DP V M Sbjct: 104 DSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM 163 Query: 406 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+YS VGG +QI +LRE +E PL++PE F++ KG P GK + Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA Sbjct: 200 FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 234
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 65.1 bits (157), Expect = 2e-10 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +1 Query: 232 DSE--RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNM 405 DSE ++I+ ++VV +V + RV +D I LP ++DP V M Sbjct: 105 DSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM 164 Query: 406 LHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+YS VGG +QI +LRE +E PL++PE F++ KG P GK + Sbjct: 165 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA Sbjct: 201 FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 235
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 65.1 bits (157), Expect = 2e-10 Identities = 37/115 (32%), Positives = 57/115 (49%) Frame = +1 Query: 241 RFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDP 420 R+++ ++VV V + RV +D I LP ++DP V M E+ Sbjct: 112 RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEK 171 Query: 421 GNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +V+YS VGG DQI +LRE +E PL++PE +++ KG P GK + Sbjct: 172 PDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226 Score = 57.8 bits (138), Expect = 3e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 + +GI+PPKGVLLYGPPGTGKTL ARA+A+ DA Sbjct: 203 YVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDA 237
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 46.2 bits (108), Expect(2) = 2e-10 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 613 F G++PP+GVLL+GPPG GKT +A A+A + Sbjct: 231 FLSTGVEPPRGVLLHGPPGCGKTSIANALAGEL 263 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/29 (68%), Positives = 25/29 (86%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 +VGI P GVLL+GPPG GKTLLA+A+A+ Sbjct: 561 KVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Score = 38.5 bits (88), Expect(2) = 2e-10 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = +1 Query: 418 PGNVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 P N S ++GG+ D + +L E I LP+++PE+FLS Sbjct: 199 PPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLS 233
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 63.5 bits (153), Expect = 5e-10 Identities = 36/118 (30%), Positives = 55/118 (46%) Frame = +1 Query: 232 DSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLH 411 + +++ ++VV +V + RV D I LP ++DP V M Sbjct: 111 EKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQV 170 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +V+Y VGG +QI LRE +ELPL++PE F+ KG P GK + Sbjct: 171 EEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTL 228 Score = 57.8 bits (138), Expect = 3e-08 Identities = 24/35 (68%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI PPKG++LYGPPGTGKTL ARA+A+ DA Sbjct: 205 FVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDA 239
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 46.6 bits (109), Expect(2) = 5e-10 Identities = 19/27 (70%), Positives = 25/27 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASN 610 I PP+GVL +GPPGTGKTL+ARA+A++ Sbjct: 444 ITPPRGVLFHGPPGTGKTLMARALAAS 470 Score = 36.6 bits (83), Expect(2) = 5e-10 Identities = 17/46 (36%), Positives = 30/46 (65%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++DP+ +M NV++ +GGL + I +L+E + LPL+ PEL+ Sbjct: 400 DLDPLGVDM------NVNFDDIGGLDNYIDQLKEMVALPLLYPELY 439
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 51.2 bits (121), Expect(2) = 9e-10 Identities = 22/32 (68%), Positives = 27/32 (84%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 613 F G+KP GVLLYGPPGTGKTLLA+A+A+ + Sbjct: 681 FSQGLKPRSGVLLYGPPGTGKTLLAKAVATEL 712 Score = 31.2 bits (69), Expect(2) = 9e-10 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELF 516 V++ +GGL + LR++++LPL PELF Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELF 681
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 47.8 bits (112), Expect(2) = 1e-09 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTLLA+AIA+N Sbjct: 744 FGSGLKKRSGILFYGPPGTGKTLLAKAIATN 774 Score = 34.3 bits (77), Expect(2) = 1e-09 Identities = 16/31 (51%), Positives = 22/31 (70%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 NV++ VGGLS + E+I+LPL +PELF Sbjct: 714 NVTWDDVGGLSSVKDAIMETIDLPLKHPELF 744
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 48.9 bits (115), Expect(2) = 1e-09 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTLLA+AIASN Sbjct: 728 FSSGMKKRSGILFYGPPGTGKTLLAKAIASN 758 Score = 33.1 bits (74), Expect(2) = 1e-09 Identities = 33/113 (29%), Positives = 55/113 (48%) Frame = +1 Query: 184 SLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIM 363 S+QS G L P+D R IVKA C ++ + L ++DMT +T + Sbjct: 638 SVQSAG------LTPMDI-RSIVKAVK-----YKCYQRLKQNDL------LIDMTDITAV 679 Query: 364 RTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 + R D ++ NV++ +GG+ E+ ++I++PL +PELF S Sbjct: 680 INIAR--DRFSDSIGAPKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS 730
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 61.6 bits (148), Expect = 2e-09 Identities = 26/35 (74%), Positives = 33/35 (94%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI+PPKGVLLYGPPGTGKTL+A+A+A+ +DA Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDA 242 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F IKPP+G+LL+GPPGTGKTLLA+A+A+ +A Sbjct: 481 FRAANIKPPRGILLFGPPGTGKTLLAKAVANESNA 515 Score = 43.1 bits (100), Expect = 6e-04 Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 11/135 (8%) Frame = +1 Query: 214 EVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPV 393 E +R + E ++++ G + G + +V+ V T I T P V V Sbjct: 106 EPVRLMGGEAYLLRLLEGRPVIKGQKIRVE---------VFGHTLTFVITATRPSGVVVV 156 Query: 394 VYNM---LHEDPG--------NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TT 540 N L E P +V+Y +GGL ++R +RE IELPL +PELF Sbjct: 157 TRNTAIELKEKPAEEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPP 216 Query: 541 KGCSALWPTWNGKDI 585 KG P GK + Sbjct: 217 KGVLLYGPPGTGKTL 231 Score = 37.4 bits (85), Expect = 0.035 Identities = 25/96 (26%), Positives = 44/96 (45%) Frame = +1 Query: 298 VDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELR 477 ++ E++ A L +T M L + ++P + + NV + +GGL +EL Sbjct: 410 IEAEEIPAEVIENLKVTREDFMEAL-KNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELM 468 Query: 478 ESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E++E PL PE+F + +G P GK + Sbjct: 469 EAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTL 504
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 42.4 bits (98), Expect(2) = 6e-09 Identities = 18/30 (60%), Positives = 23/30 (76%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++ P GVLLYGPPG GKT+LA+A+A A Sbjct: 123 LQAPSGVLLYGPPGCGKTMLAKALAKESGA 152 Score = 37.4 bits (85), Expect(2) = 6e-09 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Frame = +1 Query: 175 DLKSLQSVGQIIGEVLRPLDS-ERFIVKASSGPRYVVGCRSKVDK----EKLTAATRVVL 339 DLK++ + ++G + R + SGP SK + EKL + + Sbjct: 6 DLKTITDLSVLVGTGISLYYLVSRLLNDVESGPLSGKSRESKAKQSLQWEKLVKRSPALA 65 Query: 340 DMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++T RT ++ +++ D N+++ +GGL I +L ES+ PLM PE++ Sbjct: 66 EVTLDAYERT-------ILSSIVTPDEINITFQDIGGLDPLISDLHESVIYPLMMPEVY 117
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 59.7 bits (143), Expect = 7e-09 Identities = 27/35 (77%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI PPKG+LLYGPPGTGKTLLARA+A+ I A Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGA 272 Score = 52.0 bits (123), Expect = 1e-06 Identities = 21/35 (60%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ PPKG+LL+GPPGTGKT+LA+A+A+ A Sbjct: 513 FTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGA 547 Score = 38.5 bits (88), Expect = 0.016 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = +1 Query: 376 REVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSA 555 + + P + ++ + V+++ +GGL + ++LRE++E PL PELF KG Sbjct: 467 KSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILL 526 Query: 556 LWPTWNGK 579 P GK Sbjct: 527 FGPPGTGK 534 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 VS+ +G L + +++RE +E P+ +PELF KG P GK + Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTL 261
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 48.5 bits (114), Expect(2) = 9e-09 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F GIK G+L YGPPGTGKTLLA+AIA+N Sbjct: 845 FSNGIKKRSGILFYGPPGTGKTLLAKAIATN 875 Score = 30.4 bits (67), Expect(2) = 9e-09 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 NV + VGGL E+ ++I++P+ +PELF Sbjct: 815 NVKWEDVGGLDVVKDEILDTIDMPMKHPELF 845
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 47.0 bits (110), Expect(2) = 1e-08 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTL+A+AIA+N Sbjct: 758 FTSGMKKRSGILFYGPPGTGKTLMAKAIATN 788 Score = 31.6 bits (70), Expect(2) = 1e-08 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 NV++ +GG+ E+ ++I++PL +PELF S Sbjct: 728 NVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS 760
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 47.8 bits (112), Expect(2) = 2e-08 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTLLA+AIA+N Sbjct: 839 FSKGMKKRSGILFYGPPGTGKTLLAKAIATN 869 Score = 30.4 bits (67), Expect(2) = 2e-08 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 +V + VGGL E+ ++IE+PL +PELF Sbjct: 809 DVKWEDVGGLDVVKDEILDTIEMPLKHPELF 839
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 45.4 bits (106), Expect(2) = 2e-08 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F G+K G+L YGPPGTGKTLLA+AIA+ Sbjct: 1056 FAKGMKKRSGILFYGPPGTGKTLLAKAIAT 1085 Score = 32.3 bits (72), Expect(2) = 2e-08 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 NV + VGGL++ L E+I+LPL PELF Sbjct: 1026 NVGWDDVGGLTNVKDALVETIQLPLERPELF 1056
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 45.4 bits (106), Expect(2) = 2e-08 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F G+K G+L YGPPGTGKTLLA+AIA+ Sbjct: 1020 FAKGMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Score = 32.3 bits (72), Expect(2) = 2e-08 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 NV++ VGGL++ + E+I+LPL PELF Sbjct: 990 NVTWDDVGGLNNVKDAVTETIQLPLERPELF 1020
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 45.4 bits (106), Expect(2) = 2e-08 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F G+K G+L YGPPGTGKTLLA+AIA+ Sbjct: 1017 FAKGMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Score = 32.3 bits (72), Expect(2) = 2e-08 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 NV++ VGGL + + E+I+LPL PELF Sbjct: 987 NVTWDDVGGLGNVKDAITETIQLPLERPELF 1017
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 57.4 bits (137), Expect = 3e-08 Identities = 25/38 (65%), Positives = 32/38 (84%) Frame = +2 Query: 506 QNCFFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 Q F ++G++PPKGVLLYGPPGTGKTL+ARA A+ +A Sbjct: 193 QERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNA 230 Score = 50.8 bits (120), Expect = 3e-06 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 29/193 (15%) Frame = +1 Query: 94 ARELETRVRTGRENLKKAKKDYDKTEDDLKSLQS-----------VGQIIGEVLR----- 225 +R L+ +R +E L++ + D ++ +K Q VG I+ E+L Sbjct: 28 SRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIV-EILEMNPEE 86 Query: 226 ---------PLDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMR 366 LDS+R ++K S+ + VD + L V ++ + I+ Sbjct: 87 EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILD 146 Query: 367 TLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKG 546 TLP E D V M ++ Y +GGL QI+EL E+I LP+ + E F KG Sbjct: 147 TLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKG 206 Query: 547 CSALWPTWNGKDI 585 P GK + Sbjct: 207 VLLYGPPGTGKTL 219
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 47.4 bits (111), Expect(2) = 3e-08 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTLLA+A+A+N Sbjct: 749 FASGMKKRSGILFYGPPGTGKTLLAKAVATN 779 Score = 29.6 bits (65), Expect(2) = 3e-08 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLS 522 NV + +GGL E+ ++I++PL PELF S Sbjct: 719 NVFWEDIGGLEMVKGEILDTIDMPLKFPELFAS 751
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI+PPKGVLLYGPPGTGKTL+ARA A+ +A Sbjct: 192 FEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 226 Score = 48.5 bits (114), Expect = 2e-05 Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 19/188 (10%) Frame = +1 Query: 79 NKLLNARELETRVRTGRENLK-KAKKDYDKTEDDLKSLQSVGQIIGEVLR---------- 225 N++ +E R E++K K K++ +K + + + VG I+ E+L Sbjct: 29 NEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIV-EILEMSPEDDAEED 87 Query: 226 ----PLDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPRE 381 LDS+R ++K S+ + VD + L V ++ + I+ TLP E Sbjct: 88 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSE 147 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALW 561 D V M ++ Y+ +GGL QI+EL E+I LP+ + E F KG Sbjct: 148 YDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYG 207 Query: 562 PTWNGKDI 585 P GK + Sbjct: 208 PPGTGKTL 215
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 57.0 bits (136), Expect = 4e-08 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI+PPKGVLLYGPPGTGKTL+ARA A+ +A Sbjct: 202 FQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 236 Score = 50.1 bits (118), Expect = 5e-06 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ + VD EKL V ++ + I+ TLP E D V Sbjct: 103 LDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRV 162 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ Y+ +GGL QI+EL E+I LP+ + + F KG P G Sbjct: 163 KAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTG 222 Query: 577 KDI 585 K + Sbjct: 223 KTL 225
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 47.8 bits (112), Expect(2) = 4e-08 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F G+K G+L YGPPGTGKTLLA+AIA+N Sbjct: 865 FSNGLKKRSGILFYGPPGTGKTLLAKAIATN 895 Score = 28.9 bits (63), Expect(2) = 4e-08 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 +V + +GGL E+ ++I++PL +PELF Sbjct: 835 DVKWEDIGGLDLVKDEIMDTIDMPLKHPELF 865
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 56.6 bits (135), Expect = 6e-08 Identities = 24/35 (68%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++G++PPKGVLLYGPPGTGKTL+ARA A+ +A Sbjct: 197 FEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNA 231 Score = 50.1 bits (118), Expect = 5e-06 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 29/192 (15%) Frame = +1 Query: 97 RELETRVRTGRENLKKAKKDYDKTEDDLKSLQS-----------VGQIIGEVLR------ 225 R LE +R +E+ ++ + D ++ +K Q VG I+ E+L Sbjct: 30 RLLENEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIV-EILEMNPEDD 88 Query: 226 --------PLDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRT 369 LDS+R ++K S+ + VD + L V ++ + I+ T Sbjct: 89 AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDT 148 Query: 370 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGC 549 LP E D V M ++ Y+ +GGL QI+EL E+I LP+ + E F KG Sbjct: 149 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGV 208 Query: 550 SALWPTWNGKDI 585 P GK + Sbjct: 209 LLYGPPGTGKTL 220
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 56.6 bits (135), Expect = 6e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI PPKGV+LYGPPGTGKTL+ARA+A+ A Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVANESGA 250 Score = 52.0 bits (123), Expect = 1e-06 Identities = 23/35 (65%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R+GI+P KG LLYGPPG GKTLLA+A+A+ +A Sbjct: 493 FKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNA 527 Score = 46.2 bits (108), Expect = 8e-05 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = +1 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 E+ +SY +GGLS+Q+ ++RE IELPL +PELF KG P GK + Sbjct: 182 EEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTL 239 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/70 (30%), Positives = 37/70 (52%) Frame = +1 Query: 376 REVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSA 555 + ++P + + NV + +GGL D RE++E++ELPL+ P++F +KG Sbjct: 447 KSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLL 506 Query: 556 LWPTWNGKDI 585 P GK + Sbjct: 507 YGPPGVGKTL 516
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 56.6 bits (135), Expect = 6e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LLYGPPGTGKTL+ARA+A+ A Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 503 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 537 Score = 37.0 bits (84), Expect = 0.046 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ E V Y +GG Q+ +++E +ELPL +P LF + +G Sbjct: 185 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 244 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 245 GPPGTGKTL 253 Score = 33.5 bits (75), Expect = 0.51 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V++ +GGL D REL+E ++ P+ +P+ FL +KG P GK + Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTL 526
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 56.6 bits (135), Expect = 6e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LLYGPPGTGKTL+ARA+A+ A Sbjct: 229 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 263 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 502 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 536 Score = 37.0 bits (84), Expect = 0.046 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ E V Y +GG Q+ +++E +ELPL +P LF + +G Sbjct: 184 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 243 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 244 GPPGTGKTL 252 Score = 33.5 bits (75), Expect = 0.51 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V++ +GGL D REL+E ++ P+ +P+ FL +KG P GK + Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTL 525
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 56.6 bits (135), Expect = 6e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LLYGPPGTGKTL+ARA+A+ A Sbjct: 229 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 263 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 502 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 536 Score = 37.0 bits (84), Expect = 0.046 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ E V Y +GG Q+ +++E +ELPL +P LF + +G Sbjct: 184 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 243 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 244 GPPGTGKTL 252 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V++ +GGL D REL++ ++ P+ +P+ FL +KG P GK + Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTL 525
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 56.6 bits (135), Expect = 6e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LLYGPPGTGKTL+ARA+A+ A Sbjct: 229 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 263 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 502 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 536 Score = 37.4 bits (85), Expect = 0.035 Identities = 21/69 (30%), Positives = 32/69 (46%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ E V Y VGG Q+ +++E +ELPL +P LF + +G Sbjct: 184 EGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 243 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 244 GPPGTGKTL 252 Score = 33.5 bits (75), Expect = 0.51 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V++ +GGL D REL+E ++ P+ +P+ FL +KG P GK + Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTL 525
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 56.6 bits (135), Expect = 6e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LLYGPPGTGKTL+ARA+A+ A Sbjct: 229 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 263 Score = 49.3 bits (116), Expect = 9e-06 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 502 FLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA 536 Score = 37.0 bits (84), Expect = 0.046 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ E V Y +GG Q+ +++E +ELPL +P LF + +G Sbjct: 184 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLY 243 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 244 GPPGTGKTL 252 Score = 33.5 bits (75), Expect = 0.51 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V++ +GGL D REL+E ++ P+ +P+ FL +KG P GK + Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTL 525
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 56.6 bits (135), Expect = 6e-08 Identities = 24/35 (68%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GIKPP+GVL+YGPPGTGKTL+ARA+A+ A Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGA 274 Score = 51.6 bits (122), Expect = 2e-06 Identities = 21/35 (60%), Positives = 28/35 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 + + G+ P KGVL YGPPGTGKTLLA+A+A+ + A Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSA 547 Score = 37.4 bits (85), Expect = 0.035 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E +P+ + V Y +GG Q+ ++RE +ELPL +P+LF + +G Sbjct: 195 EGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMY 254 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 255 GPPGTGKTL 263 Score = 34.3 bits (77), Expect = 0.30 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NV++ VGGL + EL+E++E P+++P+ + +KG P GK + Sbjct: 483 NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTL 536
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPPKG+LLYGPPG+GKTL+ARA+A+ A Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 267 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 540 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V Y VGG+ Q+ ++RE +ELPL +P+LF S KG P +GK + Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256 Score = 34.7 bits (78), Expect = 0.23 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVS+ +GGL + REL+E+++ P+ +PE F +KG P GK + Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 529
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPPKG+LLYGPPG+GKTL+ARA+A+ A Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 541 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V Y VGG+ Q+ ++RE +ELPL +P+LF S KG P +GK + Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257 Score = 34.7 bits (78), Expect = 0.23 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVS+ +GGL + REL+E+++ P+ +PE F +KG P GK + Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GIKPP+G+L+YGPPGTGKTL+ARA+A+ A Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGA 284 Score = 52.0 bits (123), Expect = 1e-06 Identities = 23/35 (65%), Positives = 27/35 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F R G+ P KGVL +GPPGTGKTLLA+AIA+ A Sbjct: 523 FLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSA 557 Score = 38.1 bits (87), Expect = 0.021 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NV + +GGL + RELRE++++P+M E FL +KG P GK + Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTL 546 Score = 37.0 bits (84), Expect = 0.046 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V Y +GG Q+ ++RE +ELPL +P+LF S +G P GK + Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTL 273
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPPKG+LLYGPPG+GKTL+ARA+A+ A Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 541 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V Y VGG+ Q+ ++RE +ELPL +P+LF S KG P +GK + Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257 Score = 34.7 bits (78), Expect = 0.23 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVS+ +GGL + REL+E+++ P+ +PE F +KG P GK + Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPPKG+LLYGPPG+GKTL+ARA+A+ A Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 267 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 540 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +V Y VGG+ Q+ ++RE +ELPL +P+LF S KG P +GK + Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256 Score = 35.0 bits (79), Expect = 0.18 Identities = 19/54 (35%), Positives = 31/54 (57%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVS++ +GGL + REL+E+++ P+ +PE F +KG P GK + Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 529
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 56.2 bits (134), Expect = 7e-08 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPPKG+LLYGPPG+GKTL+ARA+A+ A Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/35 (62%), Positives = 26/35 (74%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F + G+ P KGVL YGPPG GKTLLA+AIA+ A Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 541 Score = 40.0 bits (92), Expect = 0.005 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 V Y VGG+ Q+ ++RE +ELPL +P+LF S KG P +GK + Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257 Score = 33.5 bits (75), Expect = 0.51 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 NVS+ +GGL + REL+E+++ P+ PE F +KG P GK + Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ Y + VD EKL V ++ + I+ TLP E D V Sbjct: 113 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRV 172 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ YS +GGL QI+EL E+I LP+ + E F + KG P G Sbjct: 173 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 232 Query: 577 KDI 585 K + Sbjct: 233 KTL 235 Score = 55.1 bits (131), Expect = 2e-07 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVL+YGPPGTGKTLLARA A+ A Sbjct: 212 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ Y + VD EKL V ++ + I+ TLP E D V Sbjct: 113 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRV 172 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ YS +GGL QI+EL E+I LP+ + E F + KG P G Sbjct: 173 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 232 Query: 577 KDI 585 K + Sbjct: 233 KTL 235 Score = 55.1 bits (131), Expect = 2e-07 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVL+YGPPGTGKTLLARA A+ A Sbjct: 212 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 246
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ Y + VD EKL V ++ + I+ TLP E D V Sbjct: 97 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRV 156 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ YS +GGL QI+EL E+I LP+ + E F + KG P G Sbjct: 157 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 216 Query: 577 KDI 585 K + Sbjct: 217 KTL 219 Score = 55.1 bits (131), Expect = 2e-07 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVL+YGPPGTGKTLLARA A+ A Sbjct: 196 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 230
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 55.8 bits (133), Expect = 1e-07 Identities = 23/35 (65%), Positives = 31/35 (88%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++G++PPKGVLL+GPPGTGKTLLA+A+A+ A Sbjct: 478 FEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGA 512 Score = 53.9 bits (128), Expect = 4e-07 Identities = 24/35 (68%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI+PPKGVLL GPPGTGKTLLA+A+A+ A Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGA 239 Score = 45.4 bits (106), Expect = 1e-04 Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 16/174 (9%) Frame = +1 Query: 112 RVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCR 291 RV+ R +K+AKK VL P RF GP + + Sbjct: 81 RVKVKRVEIKEAKK--------------------VVLAPTQPIRF------GPGFEDFVK 114 Query: 292 SKVDKEKLTAATRVVLDMT----TLTIMRTLPR---EVDPVVYNMLHEDP---------G 423 K+ + L+ ++V + + T ++ T P V + L E+P Sbjct: 115 RKILGQVLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVP 174 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +V+Y +GGL ++++++RE IELP+ +PELF KG + P GK + Sbjct: 175 DVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTL 228 Score = 36.6 bits (83), Expect = 0.061 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = +1 Query: 334 VLDMTTLTI--MRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNP 507 VLD +T+ + ++V+P + + NV + +GGL + +ELRE++E PL Sbjct: 416 VLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAK 475 Query: 508 ELFLSRWD*TTKGCSALWPTWNGKDI 585 E+F KG P GK + Sbjct: 476 EVFEKIGVRPPKGVLLFGPPGTGKTL 501
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ Y + VD EKL V ++ + I+ TLP E D V Sbjct: 78 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRV 137 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ YS +GGL QI+EL E+I LP+ + E F + KG P G Sbjct: 138 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 197 Query: 577 KDI 585 K + Sbjct: 198 KTL 200 Score = 55.1 bits (131), Expect = 2e-07 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVL+YGPPGTGKTLLARA A+ A Sbjct: 177 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 211
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 55.1 bits (131), Expect = 2e-07 Identities = 22/35 (62%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +G+KPP+G+LL+GPPGTGKTL+ARA+A+ A Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGA 269 Score = 47.8 bits (112), Expect = 3e-05 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 + + G++P +GVL YGPPG GKTLLA+AIA+ A Sbjct: 508 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 542 Score = 39.7 bits (91), Expect = 0.007 Identities = 21/69 (30%), Positives = 34/69 (49%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E DP+ E V Y +GG+ Q+ +++E +ELPL +P+LF + +G Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLF 249 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 250 GPPGTGKTL 258 Score = 32.7 bits (73), Expect = 0.87 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 N ++S +GGL + REL+E ++ P+ +PE +L ++G P GK + Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 531
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 55.1 bits (131), Expect = 2e-07 Identities = 25/35 (71%), Positives = 29/35 (82%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+PPKGVL+YGPPGTGKTLLARA A+ A Sbjct: 215 FENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKA 249 Score = 54.7 bits (130), Expect = 2e-07 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Frame = +1 Query: 229 LDSER----FIVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVV 396 LDS+R ++K S+ Y + VD EKL V ++ + I+ TLP + D V Sbjct: 116 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRV 175 Query: 397 YNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNG 576 M ++ YS +GGL QI+EL E+I LP+ + E F + KG P G Sbjct: 176 KAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTG 235 Query: 577 KDI 585 K + Sbjct: 236 KTL 238
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 40.8 bits (94), Expect(2) = 2e-07 Identities = 19/30 (63%), Positives = 22/30 (73%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F + I+ G+LLYGPPGTGKTLLA IA Sbjct: 866 FANLPIRQRTGILLYGPPGTGKTLLAGVIA 895 Score = 33.5 bits (75), Expect(2) = 2e-07 Identities = 19/65 (29%), Positives = 35/65 (53%) Frame = +1 Query: 322 ATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLM 501 +TR L +TTL + L + + ++ P ++ + +GGL + + L ++I+LP Sbjct: 802 STREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAK 861 Query: 502 NPELF 516 PELF Sbjct: 862 YPELF 866
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 54.7 bits (130), Expect = 2e-07 Identities = 22/31 (70%), Positives = 29/31 (93%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F +GIKPP+G+LL+GPPGTGKTL+ARA+A+ Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266 Score = 47.8 bits (112), Expect = 3e-05 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 + + G++P +GVL YGPPG GKTLLA+AIA+ A Sbjct: 509 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 543 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 E DP+ E ++ Y +GG+ Q+ +++E +ELPL +P+LF + +G Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLF 250 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 251 GPPGTGKTL 259 Score = 32.7 bits (73), Expect = 0.87 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 N ++S +GGL + REL+E ++ P+ +PE +L ++G P GK + Sbjct: 479 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTL 532
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 39.3 bits (90), Expect(2) = 3e-07 Identities = 16/21 (76%), Positives = 21/21 (100%) Frame = +2 Query: 545 GVLLYGPPGTGKTLLARAIAS 607 G+LL+GPPGTGKTLLA+A+A+ Sbjct: 740 GLLLHGPPGTGKTLLAKAVAT 760 Score = 34.7 bits (78), Expect(2) = 3e-07 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPEL 513 +VS+ VGGL D +E+ E+I+LPL +PEL Sbjct: 702 SVSWHDVGGLQDVKKEILETIQLPLEHPEL 731
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 39.3 bits (90), Expect(2) = 3e-07 Identities = 16/21 (76%), Positives = 21/21 (100%) Frame = +2 Query: 545 GVLLYGPPGTGKTLLARAIAS 607 G+LL+GPPGTGKTLLA+A+A+ Sbjct: 737 GLLLHGPPGTGKTLLAKAVAT 757 Score = 34.7 bits (78), Expect(2) = 3e-07 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPEL 513 +VS+ VGGL D +E+ E+I+LPL +PEL Sbjct: 699 SVSWHDVGGLQDVKKEILETIQLPLEHPEL 728
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 43.9 bits (102), Expect(2) = 3e-07 Identities = 18/25 (72%), Positives = 24/25 (96%) Frame = +2 Query: 533 KPPKGVLLYGPPGTGKTLLARAIAS 607 +P KGVL++GPPGTGKTLLA+A+A+ Sbjct: 270 RPWKGVLMFGPPGTGKTLLAKAVAT 294 Score = 30.0 bits (66), Expect(2) = 3e-07 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +1 Query: 400 NMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++L PG V + V GLS+ R L E++ LPL PE F Sbjct: 228 DVLDSTPG-VRWDDVAGLSEAKRLLEEAVVLPLWMPEYF 265
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 53.9 bits (128), Expect = 4e-07 Identities = 23/35 (65%), Positives = 30/35 (85%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++G+KPPKG L++GPPGTGKTLLARA A+ +A Sbjct: 211 FRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNA 245 Score = 48.5 bits (114), Expect = 2e-05 Identities = 33/113 (29%), Positives = 51/113 (45%) Frame = +1 Query: 247 IVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGN 426 ++K S+ + V+ E+L + ++ + I+ LP E D V M ++ Sbjct: 122 VIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPT 181 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 YS +GGLS QI EL E+I LP+ + F KGC P GK + Sbjct: 182 ERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTL 234
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 47.4 bits (111), Expect(2) = 5e-07 Identities = 19/31 (61%), Positives = 25/31 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F ++G+KPP G+L +GPPG GKT LA AIA+ Sbjct: 259 FKKIGVKPPSGILFHGPPGCGKTKLANAIAN 289 Score = 37.7 bits (86), Expect = 0.027 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 527 GIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 G+ G LLYGPPG GKTL+A+A A+ A Sbjct: 558 GVDLETGFLLYGPPGCGKTLIAKAAANEAGA 588 Score = 25.8 bits (55), Expect(2) = 5e-07 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 11/162 (6%) Frame = +1 Query: 64 ITEYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPL---- 231 + E KL A + R R ++ + +ED S + GE L P Sbjct: 98 VDEKEEKLQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGDVSTSEDAVYGEKLSPPRFDL 157 Query: 232 --DSERF-IVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRT--LPREVDPVV 396 DS R K +S + +G ++ + E T + + + T+ + + + Sbjct: 158 INDSLRDNYAKLNSSSKKPIGSPAEKNVEVETVSNKGRSKLATMGARKEAKVSLSLSGAT 217 Query: 397 YNMLHEDPGNV--SYSAVGGLSDQIRELRESIELPLMNPELF 516 N E G ++ GG+ + EL ++ P++NPE F Sbjct: 218 GNGDLEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPF 259
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 39.3 bits (90), Expect(2) = 8e-07 Identities = 16/21 (76%), Positives = 21/21 (100%) Frame = +2 Query: 545 GVLLYGPPGTGKTLLARAIAS 607 G+LL+GPPGTGKTLLA+A+A+ Sbjct: 739 GLLLHGPPGTGKTLLAKAVAT 759 Score = 33.1 bits (74), Expect(2) = 8e-07 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPEL 513 +VS+ VGGL + +E+ E+I+LPL +PEL Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPEL 730
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 43.5 bits (101), Expect(2) = 2e-06 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F G KP G+LLYGPPGTGK+ LA+A+A+ Sbjct: 155 FSHGRKPWSGILLYGPPGTGKSYLAKAVAT 184 Score = 27.3 bits (59), Expect(2) = 2e-06 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 403 MLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 +L E P NV + + GL + L+E++ LP+ P+LF Sbjct: 119 ILVEKP-NVRWDDIAGLENAKEALKETVLLPIKLPQLF 155
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLLYGPPGTGKTLLARA+A Sbjct: 191 LGAKIPKGVLLYGPPGTGKTLLARAVA 217
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/35 (65%), Positives = 28/35 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F +GI+ PKG L+YGPPGTGKTLLARA A+ +A Sbjct: 207 FKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNA 241 Score = 50.8 bits (120), Expect = 3e-06 Identities = 37/113 (32%), Positives = 51/113 (45%) Frame = +1 Query: 247 IVKASSGPRYVVGCRSKVDKEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGN 426 +VK SS + VD +KL V ++ + I+ TLP E D V M ++ Sbjct: 118 VVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPT 177 Query: 427 VSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +YS VGGL QI EL E+I LP+ + F KG P GK + Sbjct: 178 ETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTL 230
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLLYGPPGTGKTLLARA+A Sbjct: 191 LGAKIPKGVLLYGPPGTGKTLLARAVA 217
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 50.8 bits (120), Expect = 3e-06 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLLYGPPGTGKTLLARA+A Sbjct: 191 LGAKIPKGVLLYGPPGTGKTLLARAVA 217
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 50.4 bits (119), Expect = 4e-06 Identities = 21/34 (61%), Positives = 27/34 (79%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 + +G+ PP+GVLL+GPPG GKTLLA AIA +D Sbjct: 290 YHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 323 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F +G+ P GVLL GPPG GKTLLA+A+A+ Sbjct: 607 FKALGLVTPAGVLLAGPPGCGKTLLAKAVAN 637
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 50.1 bits (118), Expect = 5e-06 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 VG K PKG+LL GPPGTGKTLLA+AIA+ D Sbjct: 214 VGAKIPKGILLVGPPGTGKTLLAKAIANEAD 244
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 43.9 bits (102), Expect(2) = 6e-06 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKTLLA+A+A+ Sbjct: 234 FFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 264 Score = 25.4 bits (54), Expect(2) = 6e-06 Identities = 12/45 (26%), Positives = 27/45 (60%) Frame = +1 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V+ + +++ ++P NV + + L + + L+E++ LP+ PE F Sbjct: 192 VEALERDIISQNP-NVRWDDIADLVEAKKLLKEAVVLPMWMPEFF 235
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 43.9 bits (102), Expect(2) = 6e-06 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKTLLA+A+A+ Sbjct: 231 FFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 261 Score = 25.4 bits (54), Expect(2) = 6e-06 Identities = 10/45 (22%), Positives = 27/45 (60%) Frame = +1 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++ + +++ ++P N+ + + L + + L+E++ LP+ PE F Sbjct: 189 IEALERDIISQNP-NIRWDDIADLEEAKKLLKEAVVLPMWMPEFF 232
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 46.2 bits (108), Expect(2) = 6e-06 Identities = 18/25 (72%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 + PP+G+LLYGPPG GKTLLA+A+A Sbjct: 114 LSPPRGILLYGPPGCGKTLLAKAVA 138 Score = 23.1 bits (48), Expect(2) = 6e-06 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 412 EDPGNVSYSAVGGLSDQIRELRESIELPL 498 ED G + +GG + + EL++ I LPL Sbjct: 76 EDVG-ADWDEIGGCEELVAELKDRIILPL 103
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 49.7 bits (117), Expect = 7e-06 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 +G+ PP+GVLL+GPPG GKTLLA AIA +D Sbjct: 292 LGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F +G+ P G+LL GPPG GKTLLA+A+A+ Sbjct: 606 FRTLGLGTPAGILLAGPPGCGKTLLAKAVAN 636
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 49.3 bits (116), Expect = 9e-06 Identities = 24/30 (80%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F VG K PKGVLL GPPGTGKTLLA+AIA Sbjct: 197 FTAVGAKIPKGVLLVGPPGTGKTLLAKAIA 226
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 49.3 bits (116), Expect = 9e-06 Identities = 24/30 (80%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F VG K PKGVLL GPPGTGKTLLA+AIA Sbjct: 198 FTAVGAKIPKGVLLVGPPGTGKTLLAKAIA 227
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 49.3 bits (116), Expect = 9e-06 Identities = 24/30 (80%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F VG K PKGVLL GPPGTGKTLLA+AIA Sbjct: 198 FTAVGAKIPKGVLLVGPPGTGKTLLAKAIA 227
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 48.9 bits (115), Expect = 1e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F + I PPKGV+ YGPPGTGKTL+ARA+A+ Sbjct: 417 FEKFRINPPKGVVFYGPPGTGKTLVARALAN 447 Score = 34.7 bits (78), Expect = 0.23 Identities = 23/94 (24%), Positives = 43/94 (45%) Frame = +1 Query: 304 KEKLTAATRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRES 483 +++L +A +++D T ++DP+ + +V + VGGL I+ L+E Sbjct: 353 EKELQSAQHILMDRMRKTDAGQGASDIDPMSVD------SSVGFDQVGGLGHHIQSLKEV 406 Query: 484 IELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 + P++ PE+F KG P GK + Sbjct: 407 VLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTL 440
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 43.9 bits (102), Expect(2) = 1e-05 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKTLLA+A+A+ Sbjct: 234 FFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 264 Score = 24.3 bits (51), Expect(2) = 1e-05 Identities = 12/45 (26%), Positives = 27/45 (60%) Frame = +1 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V+ + +++ ++P NV + + L + + L+E++ LP+ PE F Sbjct: 192 VEALERDIISQNP-NVRWYDIADLVEAKKLLQEAVVLPMWMPEFF 235
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 43.9 bits (102), Expect(2) = 1e-05 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKTLLA+A+A+ Sbjct: 234 FFKGIRRPWKGVLMVGPPGTGKTLLAKAVAT 264 Score = 24.3 bits (51), Expect(2) = 1e-05 Identities = 12/45 (26%), Positives = 27/45 (60%) Frame = +1 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V+ + +++ ++P NV + + L + + L+E++ LP+ PE F Sbjct: 192 VEALERDIISQNP-NVRWYDIADLVEAKKLLQEAVVLPMWMPEFF 235
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +G K PKG+LL GPPGTGKTLLARA+A D Sbjct: 306 FTVLGGKLPKGILLVGPPGTGKTLLARAVAGEAD 339
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +G K PKG+LL GPPGTGKTLLARA+A D Sbjct: 306 FTVLGGKLPKGILLVGPPGTGKTLLARAVAGEAD 339
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/35 (68%), Positives = 25/35 (71%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F VG PKGVLL GPPGTGKTLLA+AIA A Sbjct: 196 FTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASA 230
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F +G + PKGVLL GPPGTGKTLLARA+A Sbjct: 191 FSAIGARIPKGVLLVGPPGTGKTLLARAVA 220
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/34 (67%), Positives = 26/34 (76%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 F +G K PKG+LL GPPGTGKTLLARA+A D Sbjct: 364 FTILGGKLPKGILLVGPPGTGKTLLARAVAGEAD 397
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 48.5 bits (114), Expect = 2e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G +PPKGVLLYG PG GKTLLA+AIA Sbjct: 180 FQKLGGRPPKGVLLYGEPGVGKTLLAKAIA 209
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/32 (71%), Positives = 26/32 (81%) Frame = +2 Query: 509 NCFFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 N F +G K PKG+L+ GPPGTGKTLLARAIA Sbjct: 174 NKFQNLGGKIPKGILMVGPPGTGKTLLARAIA 205
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 48.1 bits (113), Expect = 2e-05 Identities = 21/33 (63%), Positives = 28/33 (84%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GIK KG+LLYGPPGTGKTL+AR I + ++A Sbjct: 252 QLGIKHVKGILLYGPPGTGKTLMARQIGTMLNA 284
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 48.1 bits (113), Expect = 2e-05 Identities = 19/30 (63%), Positives = 27/30 (90%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + ++G + P+GV+LYGPPGTGKTLLA+A+A Sbjct: 256 YAQMGARSPRGVILYGPPGTGKTLLAKAVA 285
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 48.1 bits (113), Expect = 2e-05 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F +G K PKGVLL GPPGTGKTLLA+A+A Sbjct: 186 FTELGAKIPKGVLLVGPPGTGKTLLAKAVA 215
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + R+G + PKGVLL GPPGTGKTLLARAIA Sbjct: 226 YSRLGGRLPKGVLLVGPPGTGKTLLARAIA 255
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/30 (76%), Positives = 24/30 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F VG PKGVLL GPPGTGKTLLA+AIA Sbjct: 179 FLAVGASIPKGVLLVGPPGTGKTLLAKAIA 208
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 48.1 bits (113), Expect = 2e-05 Identities = 19/30 (63%), Positives = 27/30 (90%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + ++G + P+GV+LYGPPGTGKTLLA+A+A Sbjct: 253 YAQMGARSPRGVILYGPPGTGKTLLAKAVA 282
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 47.8 bits (112), Expect = 3e-05 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F +G K P+GVLL GPPGTGKTLLA+AIA Sbjct: 236 FTAIGAKIPRGVLLIGPPGTGKTLLAKAIA 265
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 47.4 bits (111), Expect = 3e-05 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +G+K P+G+LLYGPPGTGKT L RA+ DA Sbjct: 51 LGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F ++GI P +G+LL+GPPG KT LA+A A+ A Sbjct: 312 FVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQA 346
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 47.4 bits (111), Expect = 3e-05 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F + I+PP+G L YGPPGTGKTL+ARA+A+ Sbjct: 107 FEKFKIQPPRGCLFYGPPGTGKTLVARALAN 137 Score = 36.6 bits (83), Expect = 0.061 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSALWPTWNGKDI 585 +V + +VGGLS I L+E + PL+ PE+F +GC P GK + Sbjct: 77 SVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTL 130
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 47.4 bits (111), Expect = 3e-05 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F + I+PP+G L YGPPGTGKTL+ARA+A+ Sbjct: 283 FEKFKIQPPRGCLFYGPPGTGKTLVARALAN 313 Score = 37.4 bits (85), Expect = 0.035 Identities = 22/69 (31%), Positives = 35/69 (50%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 +VDP+ + +V + +VGGLS+ I L+E + PL+ PE+F +GC Sbjct: 244 DVDPMQLD------SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 297 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 298 GPPGTGKTL 306
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 47.4 bits (111), Expect = 3e-05 Identities = 20/31 (64%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F + I+PP+G L YGPPGTGKTL+ARA+A+ Sbjct: 452 FEKFKIQPPRGCLFYGPPGTGKTLVARALAN 482 Score = 37.4 bits (85), Expect = 0.035 Identities = 22/69 (31%), Positives = 35/69 (50%) Frame = +1 Query: 379 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLSRWD*TTKGCSAL 558 +VDP+ + +V + +VGGLS+ I L+E + PL+ PE+F +GC Sbjct: 413 DVDPMQLD------SSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFY 466 Query: 559 WPTWNGKDI 585 P GK + Sbjct: 467 GPPGTGKTL 475
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVL+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVL+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVL+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVL+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVL+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/30 (70%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + +G K PKGVLL GPPGTGKTLLA+A+A Sbjct: 195 YANLGAKIPKGVLLVGPPGTGKTLLAKAVA 224
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/30 (70%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + +G K PKGVLL GPPGTGKTLLA+A+A Sbjct: 195 YANLGAKIPKGVLLVGPPGTGKTLLAKAVA 224
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKG+L+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKG+L+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKG+L+ GPPGTGKTLLA+AIA Sbjct: 177 FQKLGGKIPKGILMVGPPGTGKTLLAKAIA 206
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLL GPPGTGKTLLA+A+A Sbjct: 204 LGAKIPKGVLLVGPPGTGKTLLAKAVA 230
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/30 (70%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + +G K P+GVLL GPPGTGKTLLARA+A Sbjct: 166 YTEIGGKIPRGVLLVGPPGTGKTLLARAVA 195
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 43.1 bits (100), Expect(2) = 6e-05 Identities = 19/31 (61%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKT+LA+A+A+ Sbjct: 233 FFKGIRRPWKGVLMVGPPGTGKTMLAKAVAT 263 Score = 22.7 bits (47), Expect(2) = 6e-05 Identities = 8/31 (25%), Positives = 18/31 (58%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++ + + L + + LRE++ LP+ P+ F Sbjct: 204 SIHWDDIADLEEAKKLLREAVVLPMWMPDFF 234
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 43.1 bits (100), Expect(2) = 6e-05 Identities = 19/31 (61%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKT+LA+A+A+ Sbjct: 231 FFKGIRRPWKGVLMVGPPGTGKTMLAKAVAT 261 Score = 22.7 bits (47), Expect(2) = 6e-05 Identities = 8/31 (25%), Positives = 18/31 (58%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++ + + L + + LRE++ LP+ P+ F Sbjct: 202 SIHWDDIADLEEAKKLLREAVVLPMWMPDFF 232
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 43.1 bits (100), Expect(2) = 6e-05 Identities = 19/31 (61%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ +P KGVL+ GPPGTGKT+LA+A+A+ Sbjct: 231 FFKGIRRPWKGVLMVGPPGTGKTMLAKAVAT 261 Score = 22.7 bits (47), Expect(2) = 6e-05 Identities = 8/31 (25%), Positives = 18/31 (58%) Frame = +1 Query: 424 NVSYSAVGGLSDQIRELRESIELPLMNPELF 516 ++ + + L + + LRE++ LP+ P+ F Sbjct: 202 SIHWDDIADLEEAKKLLREAVVLPMWMPDFF 232
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 46.2 bits (108), Expect = 8e-05 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 F ++G K PKG LL GPPG GKTLLA+A+A+ Sbjct: 334 FLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 46.2 bits (108), Expect = 8e-05 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 +F G+K G+L YGPPGTGKTLLA+AIA+ Sbjct: 744 WFSDGVKKRSGILFYGPPGTGKTLLAKAIAT 774
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 46.2 bits (108), Expect = 8e-05 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++G K KG+LLYGPPGTGKTL+AR I + ++A Sbjct: 247 QLGCKHVKGILLYGPPGTGKTLMARQIGTMLNA 279
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 46.2 bits (108), Expect = 8e-05 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI KG+LLYGPPGTGKTL+AR I ++A Sbjct: 298 KLGINHVKGILLYGPPGTGKTLIARQIGKMLNA 330
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 40.4 bits (93), Expect(2) = 8e-05 Identities = 20/31 (64%), Positives = 24/31 (77%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FF+ P K ++L GPPGTGKTL+ARAIAS Sbjct: 218 FFQGLRSPWKAMVLAGPPGTGKTLIARAIAS 248 Score = 25.0 bits (53), Expect(2) = 8e-05 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 Query: 382 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELF 516 V V M +S + G+ D + L E++ LPL+ PE F Sbjct: 175 VQAVRGTMATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFF 219
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 ++PPKGVLLYGPPG GKTL+A+A A Sbjct: 127 LQPPKGVLLYGPPGCGKTLIAKATA 151
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG LL GPPGTGKTLLARA+A Sbjct: 281 LGAKIPKGCLLVGPPGTGKTLLARAVA 307
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG LL GPPGTGKTLLARA+A Sbjct: 281 LGAKIPKGCLLVGPPGTGKTLLARAVA 307
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKGVLL GPPG GKTLLA+A++ Sbjct: 191 FNQIGAKLPKGVLLVGPPGVGKTLLAKAVS 220
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG LL GPPGTGKTLLARA+A Sbjct: 258 LGAKIPKGCLLVGPPGTGKTLLARAVA 284
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/33 (60%), Positives = 27/33 (81%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++GI KG+LLYGPPGTGKTL+AR I + ++A Sbjct: 268 KLGISHVKGLLLYGPPGTGKTLIARKIGTMLNA 300
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 ++PPKGVLLYGPPG GKTL+A+A A Sbjct: 126 LQPPKGVLLYGPPGCGKTLIAKATA 150
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG LL GPPGTGKTLLARA+A Sbjct: 278 LGAKIPKGCLLVGPPGTGKTLLARAVA 304
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKG LL GPPGTGKTLLA+AIA Sbjct: 180 FQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 209
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/30 (73%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G K PKG LL GPPGTGKTLLA+AIA Sbjct: 180 FQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 209
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 ++PPKGVLLYGPPG GKTL+A+A A Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKATA 147
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 ++PPKGVLLYGPPG GKTL+A+A A Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKATA 147
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/25 (76%), Positives = 23/25 (92%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIA 604 ++PPKGVLLYGPPG GKTL+A+A A Sbjct: 123 LQPPKGVLLYGPPGCGKTLIAKATA 147
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG LL GPPGTGKTLLARA+A Sbjct: 290 LGAKIPKGCLLVGPPGTGKTLLARAVA 316
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F +G + PKGVLL GPPGTGKTLLA+A A Sbjct: 186 FAELGARIPKGVLLVGPPGTGKTLLAKACA 215
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/32 (62%), Positives = 26/32 (81%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 R+GIK KG+LL+GPPGTGKTL+AR I ++ Sbjct: 244 RLGIKHVKGMLLFGPPGTGKTLMARQIGKMLN 275
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLL GPPGTGKTLLA+A A Sbjct: 202 LGAKIPKGVLLVGPPGTGKTLLAKAAA 228
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G + P GVLL GPPGTGKTLLA+A+A Sbjct: 212 FTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 F ++G + P GVLL GPPGTGKTLLA+A+A Sbjct: 212 FTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKGVLL GPPGTGKTLLARA A Sbjct: 309 LGGKLPKGVLLTGPPGTGKTLLARATA 335
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++G K KG+LLYGPPG GKTLLAR I ++A Sbjct: 247 QMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++G K KG+LLYGPPG GKTLLAR I ++A Sbjct: 247 QMGCKHVKGILLYGPPGCGKTLLARQIGKMLNA 279
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 43.9 bits (102), Expect = 4e-04 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 ++G+K +G+LL+GPPGTGKTL+AR I ++A Sbjct: 324 QLGMKHVRGILLFGPPGTGKTLMARQIGKMLNA 356
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 43.9 bits (102), Expect = 4e-04 Identities = 18/34 (52%), Positives = 26/34 (76%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 F+ KP G+LLYGPPGTGK+ LA+A+A+ ++ Sbjct: 159 FKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 192
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 43.5 bits (101), Expect = 5e-04 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = +2 Query: 539 PKGVLLYGPPGTGKTLLARAIASNIDA 619 PK VL YGPPGTGKTL+ARA+A+ ++ Sbjct: 154 PKNVLFYGPPGTGKTLMARALATETNS 180
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 43.5 bits (101), Expect = 5e-04 Identities = 19/30 (63%), Positives = 26/30 (86%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 FR +P +G+LL+GPPGTGKT+LARA+A+ Sbjct: 631 FRGLREPVRGMLLFGPPGTGKTMLARAVAT 660
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 42.7 bits (99), Expect = 8e-04 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G + P GVLL GPPGTGKTLLA+A+A Sbjct: 221 LGARIPAGVLLEGPPGTGKTLLAKAVA 247
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG +L GPPGTGKTLLA+A A Sbjct: 335 LGAKIPKGAILTGPPGTGKTLLAKATA 361
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 42.4 bits (98), Expect = 0.001 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 + ++G K P+G +L GPPGTGKTLLA+A A Sbjct: 313 YTKLGAKIPRGAILSGPPGTGKTLLAKATA 342
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG +L GPPGTGKTLLA+A A Sbjct: 202 LGAKIPKGAMLTGPPGTGKTLLAKATA 228
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/27 (70%), Positives = 22/27 (81%) Frame = +2 Query: 524 VGIKPPKGVLLYGPPGTGKTLLARAIA 604 +G K PKG +L GPPGTGKTLLA+A A Sbjct: 336 LGAKIPKGAILTGPPGTGKTLLAKATA 362
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = +2 Query: 527 GIKPPKGVLLYGPPGTGKTLLARAIA 604 G + PKG+LL GPPGTGKTLLA+A A Sbjct: 241 GARFPKGILLGGPPGTGKTLLAKATA 266
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIA 604 ++G K P+G +L GPPGTGKTLLA+A A Sbjct: 375 KMGAKIPRGAILSGPPGTGKTLLAKATA 402
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/31 (58%), Positives = 26/31 (83%) Frame = +2 Query: 515 FFRVGIKPPKGVLLYGPPGTGKTLLARAIAS 607 +F+ +P KGVL+ GPPGTGKT+LA+A+A+ Sbjct: 259 YFKGIRRPWKGVLMVGPPGTGKTMLAKAVAT 289
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIASNIDA 619 KG+LLYGPPG GKTLLAR I ++A Sbjct: 254 KGILLYGPPGCGKTLLARQIGKMLNA 279
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIASNIDA 619 P +G+LL+GPPG GKT+LA+A+A+ +A Sbjct: 372 PARGLLLFGPPGNGKTMLAKAVAAESNA 399
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/25 (60%), Positives = 24/25 (96%) Frame = +2 Query: 533 KPPKGVLLYGPPGTGKTLLARAIAS 607 +P +G+LL+GPPGTGKT++A+A+A+ Sbjct: 502 EPVRGMLLFGPPGTGKTMIAKAVAT 526
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/28 (57%), Positives = 24/28 (85%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIASNIDA 619 P +G+LL+GPPG GKT+LA+A+A+ +A Sbjct: 374 PARGLLLFGPPGNGKTMLAKAVAAESNA 401
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/32 (53%), Positives = 25/32 (78%) Frame = +2 Query: 521 RVGIKPPKGVLLYGPPGTGKTLLARAIASNID 616 ++ K KG+LLYGPPGTGKTL+AR ++ ++ Sbjct: 304 KLDYKHCKGLLLYGPPGTGKTLIARKLSKMLN 335 Score = 35.0 bits (79), Expect = 0.18 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIASNID 616 + +LLYGPPG GKT +A +A N D Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSD 618
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 38.9 bits (89), Expect = 0.012 Identities = 15/24 (62%), Positives = 22/24 (91%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIAS 607 P +G+LL+GPPGTGK+ LA+A+A+ Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVAT 182
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 38.9 bits (89), Expect = 0.012 Identities = 15/24 (62%), Positives = 22/24 (91%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIAS 607 P +G+LL+GPPGTGK+ LA+A+A+ Sbjct: 159 PWRGILLFGPPGTGKSYLAKAVAT 182
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 38.9 bits (89), Expect = 0.012 Identities = 15/24 (62%), Positives = 22/24 (91%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIAS 607 P +G+LL+GPPGTGK+ LA+A+A+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVAT 189
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 38.9 bits (89), Expect = 0.012 Identities = 15/24 (62%), Positives = 22/24 (91%) Frame = +2 Query: 536 PPKGVLLYGPPGTGKTLLARAIAS 607 P +G+LL+GPPGTGK+ LA+A+A+ Sbjct: 166 PWRGILLFGPPGTGKSYLAKAVAT 189
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 38.1 bits (87), Expect = 0.021 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = +2 Query: 539 PKGVLLYGPPGTGKTLLARAIA 604 P G+LL GPPGTGKTLL +A+A Sbjct: 1007 PHGILLTGPPGTGKTLLVQALA 1028
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 38.1 bits (87), Expect = 0.021 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 F GI PKG+LL G GTGK+L A+AIA++ Sbjct: 252 FNYGIPTPKGLLLVGIQGTGKSLTAKAIAND 282
>RUVB_MYCPN (P75242) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 307 Score = 37.4 bits (85), Expect = 0.035 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNID 616 +LLYGPPG GKT LAR IAS ++ Sbjct: 41 ILLYGPPGVGKTTLARLIASEMN 63
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 37.4 bits (85), Expect = 0.035 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +2 Query: 527 GIKPPKGVLLYGPPGTGKTLLARAIASNID 616 GI +G LLYGPPG+GKT +A+A +D Sbjct: 256 GIPYRRGYLLYGPPGSGKTSFIQALAGELD 285
>PDR3_TOBAC (Q5W274) Pleiotropic drug resistance protein 3 (NtPDR3)| Length = 1447 Score = 37.4 bits (85), Expect = 0.035 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNID 616 IKP + LL GPPG GKT L +A++ N+D Sbjct: 195 IKPGRMTLLLGPPGCGKTSLLKALSGNLD 223
>RFCL_METKA (Q8TZC5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 510 Score = 37.0 bits (84), Expect = 0.046 Identities = 18/32 (56%), Positives = 22/32 (68%) Frame = +2 Query: 509 NCFFRVGIKPPKGVLLYGPPGTGKTLLARAIA 604 N + R I P+ VLL+GPPGTGKT A A+A Sbjct: 31 NEWARGSIPEPRAVLLHGPPGTGKTSAAYALA 62
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 36.6 bits (83), Expect = 0.061 Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = +2 Query: 527 GIKPPK-GVLLYGPPGTGKTLLARAIASNID 616 G KP K LLYGPPG GKT L AIAS + Sbjct: 44 GRKPDKRAALLYGPPGVGKTSLVEAIASEFN 74
>RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 437 Score = 36.6 bits (83), Expect = 0.061 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIA 604 K VLLYGPPG GKT LA A+A Sbjct: 42 KAVLLYGPPGVGKTTLAEALA 62
>RFCL_SULTO (Q975D4) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 440 Score = 36.6 bits (83), Expect = 0.061 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIA 604 K VLLYGPPG GKT LA A+A Sbjct: 42 KAVLLYGPPGVGKTTLAEALA 62
>RUVB_MYCGE (Q49425) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 307 Score = 36.2 bits (82), Expect = 0.079 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNI 613 +LLYGPPG GKT LAR IA+ + Sbjct: 41 ILLYGPPGVGKTTLARLIANEL 62
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 36.2 bits (82), Expect = 0.079 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = +2 Query: 527 GIKPPKGVLLYGPPGTGKTLLARAIASNID 616 GI +G LLYGPPG+GKT A+A +D Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGELD 267
>YCF2_PELHO (Q32836) Protein ycf2| Length = 2109 Score = 35.8 bits (81), Expect = 0.10 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +2 Query: 518 FRVGIKPPKGVLLYGPPGTGKTLLARAIASN 610 FR+ + PP+G+L+ G GTG++ L +++A N Sbjct: 1322 FRLDLSPPRGILVIGSIGTGRSYLIKSLAKN 1352
>PDR4_ORYSA (Q8GU89) Pleiotropic drug resistance protein 4| Length = 1450 Score = 35.8 bits (81), Expect = 0.10 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNID 616 IKP + LL GPPG+GKT L A+A +D Sbjct: 181 IKPRRMTLLLGPPGSGKTTLLLALAGKLD 209
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 35.8 bits (81), Expect = 0.10 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIA 604 + VL+YGPPGTGKTL A+ +A Sbjct: 345 RNVLMYGPPGTGKTLFAKKLA 365
>RUVB_MYCH2 (Q600N3) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 318 Score = 35.4 bits (80), Expect = 0.13 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNIDA 619 +L YGPPGTGKT LA +A+ ++A Sbjct: 42 ILFYGPPGTGKTTLANIVANVLEA 65
>RFCL_SULSO (Q9UXF6) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (SsoRFC large subunit) Length = 405 Score = 35.4 bits (80), Expect = 0.13 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIA 604 K VLL+GPPG GKT+LA A+A Sbjct: 41 KAVLLHGPPGVGKTVLAEALA 61
>PDR1_NICPL (Q949G3) Pleiotropic drug resistance protein 1 (NpPDR1)| Length = 1436 Score = 35.4 bits (80), Expect = 0.13 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNIDA 619 +KP + LL GPPG+GKT L A+A +D+ Sbjct: 188 VKPCRMTLLLGPPGSGKTTLLLALAGKLDS 217
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 35.4 bits (80), Expect = 0.13 Identities = 13/25 (52%), Positives = 21/25 (84%) Frame = +2 Query: 539 PKGVLLYGPPGTGKTLLARAIASNI 613 P+ VL +G PGTGKT+LA+++A+ + Sbjct: 157 PRNVLFHGSPGTGKTMLAKSLANEL 181
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 35.4 bits (80), Expect = 0.13 Identities = 13/25 (52%), Positives = 21/25 (84%) Frame = +2 Query: 539 PKGVLLYGPPGTGKTLLARAIASNI 613 P+ VL +G PGTGKT+LA+++A+ + Sbjct: 157 PRNVLFHGSPGTGKTMLAKSLANEL 181
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 35.4 bits (80), Expect = 0.13 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = +2 Query: 542 KGVLLYGPPGTGKTLLARAIA 604 + +L+YGPPGTGKTL A+ +A Sbjct: 394 RNILMYGPPGTGKTLFAKKLA 414
>RUVB_MYCHJ (Q4A9R6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 312 Score = 35.4 bits (80), Expect = 0.13 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNIDA 619 +L YGPPGTGKT LA +A+ ++A Sbjct: 36 ILFYGPPGTGKTTLANIVANVLEA 59
>RUVB_MYCH7 (Q4A7W4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 312 Score = 35.4 bits (80), Expect = 0.13 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNIDA 619 +L YGPPGTGKT LA +A+ ++A Sbjct: 36 ILFYGPPGTGKTTLANIVANVLEA 59
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 35.4 bits (80), Expect = 0.13 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIA 604 +LLYGPPGTGKTL A+ +A Sbjct: 348 ILLYGPPGTGKTLFAKKLA 366
>RUVB_ANAMM (Q5PBM1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 331 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +2 Query: 533 KPPKGVLLYGPPGTGKTLLARAIASNI 613 +P VLLYGPPG GKT LA IA + Sbjct: 51 EPMDHVLLYGPPGLGKTTLAHIIAKEL 77
>RFCL_METTH (O26342) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (mthRFC large subunit) Length = 479 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/23 (69%), Positives = 17/23 (73%) Frame = +2 Query: 533 KPPKGVLLYGPPGTGKTLLARAI 601 KP K +LL GPPGTGKT LA I Sbjct: 36 KPQKPLLLVGPPGTGKTTLAHII 58
>TUR2_SPIPO (O24367) Pleiotropic drug resistance protein TUR2 (Protein Turion| 2) Length = 1441 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNID 616 IKP + LL GPPG GKT L A+A +D Sbjct: 181 IKPCRMTLLLGPPGAGKTTLLLALAGKLD 209
>RUVB_EHRCJ (Q3YRD9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 329 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +2 Query: 533 KPPKGVLLYGPPGTGKTLLARAIASNI 613 +P VLLYGPPG GKT LA IA + Sbjct: 49 EPMDHVLLYGPPGLGKTTLAHIIAKEL 75
>PDR6_ARATH (Q7PC87) Pleiotropic drug resistance protein 6| Length = 1453 Score = 35.0 bits (79), Expect = 0.18 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +2 Query: 530 IKPPKGVLLYGPPGTGKTLLARAIASNID 616 IKP + LL GPP +GKT L +A+A +D Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGKLD 224
>RUVB_LISMO (Q8Y6Z8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/22 (72%), Positives = 17/22 (77%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNI 613 VLLYGPPG GKT LA IAS + Sbjct: 57 VLLYGPPGLGKTTLAMVIASEM 78
>RUVB_LISIN (Q92BI2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 335 Score = 35.0 bits (79), Expect = 0.18 Identities = 16/22 (72%), Positives = 17/22 (77%) Frame = +2 Query: 548 VLLYGPPGTGKTLLARAIASNI 613 VLLYGPPG GKT LA IAS + Sbjct: 57 VLLYGPPGLGKTTLAMVIASEM 78
>K0690_MOUSE (Q6P5B0) Protein Kiaa0690| Length = 1295 Score = 35.0 bits (79), Expect = 0.18 Identities = 18/57 (31%), Positives = 32/57 (56%) Frame = +1 Query: 70 EYRNKLLNARELETRVRTGRENLKKAKKDYDKTEDDLKSLQSVGQIIGEVLRPLDSE 240 EY L+N R+ ETR + R + A ++ ++ E++ + +QS G I E+L + E Sbjct: 1028 EYHKVLINIRKAETRAKKHRALSQAAVEEEEEEEEEEEPVQSKGDSIEEILADSEDE 1084
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 34.7 bits (78), Expect = 0.23 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 539 PKGVLLYGPPGTGKTLLARAIA 604 P G L GPPGTGKTL+A+A++ Sbjct: 378 PMGYLFAGPPGTGKTLMAKAMS 399 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,670,253 Number of Sequences: 219361 Number of extensions: 1750530 Number of successful extensions: 9602 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 8743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9591 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
