ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15i20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157O09, full insert sequence Length = 2010 Score = 567 bits (286), Expect = e-158 Identities = 492/560 (87%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||||||||||||||| || || || || |||||||||||||||||| Sbjct: 211 aaaatggtggttcttgctgcttccatcatttcaaagtccgggaaagcacttgtttcaaga 270 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 || | |||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 271 cagtttgttgacatgtctcgcataaggattgaaggattacttgcagctttccccaaactg 330 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 331 gttggaactgggaagcagcacacttatgttgagactgaaaatgttcgctatgtttatcag 390 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || || |||||||| || |||| |||||||||||||||||| | ||||||||||||||| Sbjct: 391 ccaatagaaggcctgtacttgctacttatcacaaacaagcagggcaatattcttgaagat 450 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgag 419 |||||||| ||||||| || || ||||||||||||||||||| | ||||| |||||| Sbjct: 451 ctggacaccttgaggctgctctctaagcttgtgcctgaatactccccctctcttgatgag 510 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || | ||||||||||||||||||||||||||||| || || ||||| |||||||| Sbjct: 511 gagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgaagccatctctctt 570 Query: 480 ggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccat 539 ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 571 ggaaataaggaaaatgtaacagttcaacaagtcaaacaatattgcgagatggagagccat 630 Query: 540 gaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatg 599 ||||||||||| || |||||||||||||| ||||||||||||||||| | || || ||| Sbjct: 631 gaagagaaggctcacaagctgatgatgcaaagcaaaatcaatgaaacaagggacgtgatg 690 Query: 600 aagaagagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaagga 659 ||||||| ||||||||||||||| || || |||||||| | ||| ||||| ||||||||| Sbjct: 691 aagaagaaagctagtgagcttgataagatgaggatggaaagaggaaaacttgacaaagga 750 Query: 660 ggatactcatcaatatctgg 679 |||||||||||||||||||| Sbjct: 751 ggatactcatcaatatctgg 770
>gb|AF216852.1|AF216852 Zea mays delta-COP mRNA, complete cds Length = 1947 Score = 543 bits (274), Expect = e-151 Identities = 489/560 (87%), Gaps = 3/560 (0%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||| ||||| ||| | || || || || |||||||||||||||||| Sbjct: 148 aaaatggtggttcttgcagcttcaatcgtttcaaagtcggggaaagcacttgtttcaaga 207 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 || | |||||||||||| || || || |||||||| |||||||| || ||||||||||| Sbjct: 208 cagtttgttgacatgtctcgcataagaattgaaggattacttgctgcgttcccgaaactg 267 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 |||||||||||||| |||||||||||| |||| ||||||| || ||||||||||||||| Sbjct: 268 gttggaactgggaaacagcacacttatgttgaaactgaaaatgtgcgttatgtttatcaa 327 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 ||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 328 cctattgaaggattatatcttctacttatcacaaacaagcagagcaatattcttgaagat 387 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgag 419 ||||||||| ||||||| || |||||||||||||||||||||| | || |||||||| Sbjct: 388 ctggacacattgaggcttctctccaagcttgtgcctgaatactccccttccttggatgag 447 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || |||| |||||||||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 448 gacggtatttgtaaaacagcatttgagattatatttgcttttgatgaagccatctctctt 507 Query: 480 ggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccat 539 || |||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||| Sbjct: 508 gggaacaaggaaaatgtgacagtgcaacaagttaaacaatattgtgagatggagagccat 567 Query: 540 gaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatg 599 ||||||||||| || |||||||||||||| ||||||||| ||||| || ||| ||||| Sbjct: 568 gaagagaaggcacacaagctgatgatgcaagccaaaatcaacgaaaccaaggatctcatg 627 Query: 600 aagaagagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaagga 659 |||||||| |||| ||| ||||||||||| |||||||| | |||||| || ||||||||| Sbjct: 628 aagaagagggctaatgaacttgacaaaatgaggatggaaagaggcaagcttgacaaagga 687 Query: 660 ggatactcatcaatatctgg 679 |||||||||||||||||||| Sbjct: 688 ggatactcatcaatatctgg 707
>gb|AY109599.1| Zea mays CL1247_1 mRNA sequence Length = 2174 Score = 535 bits (270), Expect = e-149 Identities = 485/556 (87%), Gaps = 3/556 (0%) Strand = Plus / Plus Query: 127 tggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaagacaat 186 ||||||||||||| ||||| ||| | || || || || |||||||||||||||||||| | Sbjct: 241 tggtggttcttgcagcttcaatcgtttcaaagtcggggaaagcacttgtttcaagacagt 300 Query: 187 atgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaacttgttg 246 |||||||||||| || || || |||||||| |||||||| || ||||||||||| |||| Sbjct: 301 ttgttgacatgtctcgcataagaattgaaggattacttgctgcgttcccgaaactggttg 360 Query: 247 gaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaaccta 306 |||||||||| |||||||||||| |||| ||||||| || ||||||||||||||||||| Sbjct: 361 gaactgggaaacagcacacttatgttgaaactgaaaatgtgcgttatgtttatcaaccta 420 Query: 307 ttgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagatctgg 366 ||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 ttgaaggattatatcttctacttatcacaaacaagcagagcaatattcttgaagatctgg 480 Query: 367 acacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgaggata 423 ||||| ||||||| || |||||||||||||||||||||| | || |||||||||| Sbjct: 481 acacattgaggcttctctccaagcttgtgcctgaatactccccttccttggatgaggacg 540 Query: 424 gtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctcggaa 483 |||| |||||||||||||||||| |||||||||| ||||| ||||| |||||||| || | Sbjct: 541 gtatttgtaaaacagcatttgagattatatttgcttttgatgaagccatctctcttggga 600 Query: 484 acaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccatgaag 543 ||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 601 acaaggaaaatgtgacagtgcaacaagttaaacaatattgtgagatggagagccatgaag 660 Query: 544 agaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatgaaga 603 ||||||| || |||||||||||||| ||||||||| ||||| || ||| ||||||||| Sbjct: 661 agaaggcacacaagctgatgatgcaagccaaaatcaacgaaaccaaggatctcatgaaga 720 Query: 604 agagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaaggaggat 663 |||| |||| ||| ||||||||||| |||||||| | |||||| || ||||||||||||| Sbjct: 721 agagggctaatgaacttgacaaaatgaggatggaaagaggcaagcttgacaaaggaggat 780 Query: 664 actcatcaatatctgg 679 |||||||||||||||| Sbjct: 781 actcatcaatatctgg 796
>dbj|AK100520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J17, full insert sequence Length = 1972 Score = 505 bits (255), Expect = e-140 Identities = 482/557 (86%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||||||||||||||| || || || || |||||||||||||||||| Sbjct: 186 aaaatggtggttcttgctgcttccatcatttcaaagtccgggaaagcacttgtttcaaga 245 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 || | |||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 246 cagtttgttgacatgtctcgcataaggattgaaggattacttgcagctttccccaaactg 305 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 306 gttggaactgggaagcagcacacttatgttgagactgaaaatgttcgctatgtttatcag 365 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || || |||||||| || |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 366 ccaatagaaggcctgtacttgctacttatcactaacaagcagagcaatattcttgaagat 425 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgag 419 |||||||| ||||||| || || ||||||||||||||||| | | ||||| |||||| Sbjct: 426 ctggacaccttgaggctgctctctaagcttgtgcctgaatattctccctctcttgatgag 485 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || | ||||||||||||||||||||||||||||| || || || || |||| ||| Sbjct: 486 gagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgaggccatctgtctt 545 Query: 480 ggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccat 539 ||||| |||||||| |||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 546 ggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgagatggagagccat 605 Query: 540 gaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatg 599 |||||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||| Sbjct: 606 gaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaacaagggatgtgatg 665 Query: 600 aagaagagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaagga 659 ||||||| ||| ||||||||||| || || | |||||| | ||| ||||| ||||||||| Sbjct: 666 aagaagaaagccagtgagcttgataagatgaagatggaaagaggaaaacttgacaaagga 725 Query: 660 ggatactcatcaatatc 676 |||||||| ||||||| Sbjct: 726 ggatactcggcaatatc 742
>dbj|AK099633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059C16, full insert sequence Length = 1962 Score = 505 bits (255), Expect = e-140 Identities = 482/557 (86%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||||||||||||||| || || || || |||||||||||||||||| Sbjct: 176 aaaatggtggttcttgctgcttccatcatttcaaagtccgggaaagcacttgtttcaaga 235 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 || | |||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 236 cagtttgttgacatgtctcgcataaggattgaaggattacttgcagctttccccaaactg 295 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 296 gttggaactgggaagcagcacacttatgttgagactgaaaatgttcgctatgtttatcag 355 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || || |||||||| || |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 356 ccaatagaaggcctgtacttgctacttatcactaacaagcagagcaatattcttgaagat 415 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgag 419 |||||||| ||||||| || || ||||||||||||||||| | | ||||| |||||| Sbjct: 416 ctggacaccttgaggctgctctctaagcttgtgcctgaatattctccctctcttgatgag 475 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || | ||||||||||||||||||||||||||||| || || || || |||| ||| Sbjct: 476 gagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgaggccatctgtctt 535 Query: 480 ggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccat 539 ||||| |||||||| |||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 536 ggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgagatggagagccat 595 Query: 540 gaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatg 599 |||||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||| Sbjct: 596 gaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaacaagggatgtgatg 655 Query: 600 aagaagagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaagga 659 ||||||| ||| ||||||||||| || || | |||||| | ||| ||||| ||||||||| Sbjct: 656 aagaagaaagccagtgagcttgataagatgaagatggaaagaggaaaacttgacaaagga 715 Query: 660 ggatactcatcaatatc 676 |||||||| ||||||| Sbjct: 716 ggatactcggcaatatc 732
>dbj|AK100201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F10, full insert sequence Length = 1972 Score = 498 bits (251), Expect = e-137 Identities = 481/557 (86%), Gaps = 3/557 (0%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||||||||||||||| || || || || |||||||||||||||||| Sbjct: 186 aaaatggtggttcttgctgcttccatcatttcaaagtccgggaaagcacttgtttcaaga 245 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 || | |||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| Sbjct: 246 cagtttgttgacatgtctcgcataaggattgaaggattacttgcagctttccccaaactg 305 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 306 gttggaactgggaagcagcacacttatgttgagactgaaaatgttcgctatgtttatcag 365 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || || |||||||| || |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 366 ccaatagaaggcctgtacttgctacttatcactaacaagcagagcaatattcttgaagat 425 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaatact---cgtctctggatgag 419 |||||||| || |||| || || ||||||||||||||||| | | ||||| |||||| Sbjct: 426 ctggacaccttggggctgctctctaagcttgtgcctgaatattctccctctcttgatgag 485 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || | ||||||||||||||||||||||||||||| || || || || |||| ||| Sbjct: 486 gagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgaggccatctgtctt 545 Query: 480 ggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgagatggaaagccat 539 ||||| |||||||| |||||||| || |||||||| ||||| || |||||||| |||||| Sbjct: 546 ggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgagatggagagccat 605 Query: 540 gaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatg 599 |||||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||| Sbjct: 606 gaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaacaagggatgtgatg 665 Query: 600 aagaagagagctagtgagcttgacaaaatcaggatggagaaaggcaaactcgacaaagga 659 ||||||| ||| ||||||||||| || || | |||||| | ||| ||||| ||||||||| Sbjct: 666 aagaagaaagccagtgagcttgataagatgaagatggaaagaggaaaacttgacaaagga 725 Query: 660 ggatactcatcaatatc 676 |||||||| ||||||| Sbjct: 726 ggatactcggcaatatc 742
>dbj|AK106813.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C12, full insert sequence Length = 2584 Score = 387 bits (195), Expect = e-104 Identities = 445/525 (84%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 112 caaagctattgaaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcac 171 ||||| |||| ||||||||||||||||||||||| |||||||| || || |||||||||| Sbjct: 222 caaagttattaaaaatggtggttcttgctgcttctatcatctcaaagtcaggaaaagcac 281 Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| |||||||||||| | || || ||||||||||| ||||||||||||| Sbjct: 282 ttgtttctagacagtatgttgacatgactcgcataaggattgaaggattacttgcagcat 341 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 |||| ||||||||||||| ||| |||||||||||||| |||||||||||| || ||| Sbjct: 342 tccctaaacttgttggaaatggaaagcagcacacttacattgagactgaaaatgtctgtt 401 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 | ||||| ||||||||||||||| ||||||| | ||||||||||||| || ||||||| Sbjct: 402 acgtttaccaacctattgaaggcttatatcttgtagttatcacaaacaaacaaagtaata 461 Query: 352 ttcttgaagatctggacacactgaggctactatccaagcttgtgcctgaatact---cgt 408 ||||||| ||||| ||||| |||||||||| |||||||||||||||||||||| | | Sbjct: 462 ttcttgaggatctcgacacgttgaggctactctccaagcttgtgcctgaatactgcccct 521 Query: 409 ctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaag 468 |||| ||||| ||| || | ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 522 ctctcgatgacgatggtgtttgtaaaacagcttttgagcttatatttgcttttgacgaag 581 Query: 469 caatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgaga 528 | || ||||| ||||| |||||||| |||||||| || || ||||| |||| || |||| Sbjct: 582 ccatttctcttggaaataaggaaaaagtaacagttcaacaggtcaaagaatattgtgaga 641 Query: 529 tggaaagccatgaagagaaggcgcataagctgatgatgc-agagcaaaatcaatgaaact 587 |||| || |||||||| || | | |||| |||||||| |||| |||||||| ||||| Sbjct: 642 tggatagtgttgaagagatggagtacaagcagatgatgcaagag-aaaatcaaggaaacc 700 Query: 588 aaagatgtcatgaagaagagagctagtgagcttgacaaaatcagg 632 |||||| | |||||||||| || || |||| |||| |||| |||| Sbjct: 701 aaagattttatgaagaagaaagttattgagattgagaaaaccagg 745 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1208 gatggagaaaggcaaacataacaaaggaggatactcatcaatatc 1252
>emb|Z67962.1|OSARDCOP O.sativa mRNA for archain/delta-COP Length = 1960 Score = 268 bits (135), Expect = 2e-68 Identities = 399/482 (82%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||| ||||| || || ||||| ||||||||||| |||||||| ||| Sbjct: 148 aaaatggtggttcttgcagcttctattatatcgaagtctggaaaagctcttgtttcgaga 207 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 |||| |||||||||||||||||| ||||| || ||| | ||||||||||| ||||| || Sbjct: 208 caatttgttgacatgtcccggataaggatcgatgggctgcttgcagcatttccgaagctg 267 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 || |||| ||| ||||| || |||||| |||||||||||| ||||||||||| |||||| Sbjct: 268 gtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgttatgtctatcaa 327 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || ||||||| || ||| |||| || |||||||| ||||| ||||| |||||||||||| Sbjct: 328 ccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaacattcttgaagat 387 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaata--ct-cgtctctggatgag 419 ||||| || | |||||||| ||||||||| | |||||||| || | ||| ||||||| Sbjct: 388 ctggatactttaaggctactctccaagcttatacctgaatatgctccctctttggatgaa 447 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || ||||||| ||||||| |||||| | ||||| ||| ||||| || ||||| Sbjct: 448 gagggtgtctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctctt 507 Query: 480 ggaaacaaggaaaatgtaacag-tgcagcaagtcaagcaatactgcgagatggaaagcca 538 |||||||| || || ||||| | |||| ||||| || |||||||| || ||||| ||||| Sbjct: 508 ggaaacaaagagaacgtaactgttgca-caagttaaacaatactgtgaaatggagagcca 566 Query: 539 tgaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcat 598 |||||| ||| ||| |||||| | ||||| |||||||| ||||||||||| |||||||| Sbjct: 567 tgaagaaaagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcat 626 Query: 599 ga 600 || Sbjct: 627 ga 628
>dbj|AK069745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K10, full insert sequence Length = 2042 Score = 268 bits (135), Expect = 2e-68 Identities = 399/482 (82%), Gaps = 5/482 (1%) Strand = Plus / Plus Query: 123 aaaatggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaaga 182 ||||||||||||||||| ||||| || || ||||| ||||||||||| |||||||| ||| Sbjct: 230 aaaatggtggttcttgcagcttctattatatcgaagtctggaaaagctcttgtttcgaga 289 Query: 183 caatatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaactt 242 |||| |||||||||||||||||| ||||| || ||| | ||||||||||| ||||| || Sbjct: 290 caatttgttgacatgtcccggataaggatcgatgggctgcttgcagcatttccgaagctg 349 Query: 243 gttggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaa 302 || |||| ||| ||||| || |||||| |||||||||||| ||||||||||| |||||| Sbjct: 350 gtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgttatgtctatcaa 409 Query: 303 cctattgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagat 362 || ||||||| || ||| |||| || |||||||| ||||| ||||| |||||||||||| Sbjct: 410 ccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaacattcttgaagat 469 Query: 363 ctggacacactgaggctactatccaagcttgtgcctgaata--ct-cgtctctggatgag 419 ||||| || | |||||||| ||||||||| | |||||||| || | ||| ||||||| Sbjct: 470 ctggatactttaaggctactctccaagcttatacctgaatatgctccctctttggatgaa 529 Query: 420 gatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctc 479 || || ||||||| ||||||| |||||| | ||||| ||| ||||| || ||||| Sbjct: 530 gagggtgtctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctctt 589 Query: 480 ggaaacaaggaaaatgtaacag-tgcagcaagtcaagcaatactgcgagatggaaagcca 538 |||||||| || || ||||| | |||| ||||| || |||||||| || ||||| ||||| Sbjct: 590 ggaaacaaagagaacgtaactgttgca-caagttaaacaatactgtgaaatggagagcca 648 Query: 539 tgaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcat 598 |||||| ||| ||| |||||| | ||||| |||||||| ||||||||||| |||||||| Sbjct: 649 tgaagaaaagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcat 708 Query: 599 ga 600 || Sbjct: 709 ga 710
>ref|NM_190465.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 262 bits (132), Expect = 1e-66 Identities = 396/479 (82%), Gaps = 5/479 (1%) Strand = Plus / Plus Query: 126 atggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaagacaa 185 |||||||||||||| ||||| || || ||||| ||||||||||| |||||||| |||||| Sbjct: 1 atggtggttcttgcagcttctattatatcgaagtctggaaaagctcttgtttcgagacaa 60 Query: 186 tatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaacttgtt 245 | |||||||||||||||||| ||||| || ||| | ||||||||||| ||||| || || Sbjct: 61 tttgttgacatgtcccggataaggatcgatgggctgcttgcagcatttccgaagctggtc 120 Query: 246 ggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaacct 305 |||| ||| ||||| || |||||| |||||||||||| ||||||||||| |||||||| Sbjct: 121 ggaagtggaaagcaacatacttatgttgagactgaaaatgttcgttatgtctatcaacca 180 Query: 306 attgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagatctg 365 ||||||| || ||| |||| || |||||||| ||||| ||||| ||||||||||||||| Sbjct: 181 attgaagcactgtatttgcttctcatcacaaataagcaaagtaacattcttgaagatctg 240 Query: 366 gacacactgaggctactatccaagcttgtgcctgaata--ct-cgtctctggatgaggat 422 || || | |||||||| ||||||||| | |||||||| || | ||| ||||||| || Sbjct: 241 gatactttaaggctactctccaagcttatacctgaatatgctccctctttggatgaagag 300 Query: 423 agtatctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctcgga 482 || ||||||| ||||||| |||||| | ||||| ||| ||||| || ||||| ||| Sbjct: 301 ggtgtctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctcttgga 360 Query: 483 aacaaggaaaatgtaacag-tgcagcaagtcaagcaatactgcgagatggaaagccatga 541 ||||| || || ||||| | |||| ||||| || |||||||| || ||||| |||||||| Sbjct: 361 aacaaagagaacgtaactgttgca-caagttaaacaatactgtgaaatggagagccatga 419 Query: 542 agagaaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatga 600 ||| ||| ||| |||||| | ||||| |||||||| ||||||||||| |||||||||| Sbjct: 420 agaaaagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcatga 478
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||||||||| | |||||||||||| || || ||||||||||| |||||||| Sbjct: 129077 agcacttgtttcaagacagtttgttgacatgtctcgcataaggattgaaggattacttgc 129136 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 129137 agctttccccaaactggttggaactgggaagcagcacacttatgttgagactgaaaatgt 129196 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||| ||||||||||| || || |||||||| || |||| |||||||||||||||||||| Sbjct: 129197 tcgctatgtttatcagccaatagaaggcctgtacttgctacttatcacaaacaagcagag 129256 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 129257 caatattcttgaagatctggacaccttgaggctgctctctaagcttgt 129304 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||||||||| | |||||||||||| || || ||||||||||| |||||||| Sbjct: 139249 agcacttgtttcaagacagtttgttgacatgtctcgcataaggattgaaggattacttgc 139308 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 139309 agctttccccaaactggttggaactgggaagcagcacacttatgttgagactgaaaatgt 139368 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||| ||||||||||| || || |||||||| || |||| |||||||| ||||||||||| Sbjct: 139369 tcgctatgtttatcagccaatagaaggcctgtacttgctacttatcactaacaagcagag 139428 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 139429 caatattcttgaagatctggacaccttgaggctgctctctaagcttgt 139476 Score = 228 bits (115), Expect = 2e-56 Identities = 204/233 (87%), Gaps = 3/233 (1%) Strand = Plus / Plus Query: 393 gtgcctgaatact---cgtctctggatgaggatagtatctgtaaaacagcatttgagctt 449 ||||||||||||| | ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 129711 gtgcctgaatactccccctctcttgatgaggagggtgtttgtaaaacagcatttgagctt 129770 Query: 450 atatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaacagtgcagcaa 509 |||||||| || || ||||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 129771 atatttgccttcgatgaagccatctctcttggaaataaggaaaatgtaacagttcaacaa 129830 Query: 510 gtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctgatgatgcag 569 ||||| ||||| ||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 129831 gtcaaacaatattgcgagatggagagccatgaagagaaggctcacaagctgatgatgcaa 129890 Query: 570 agcaaaatcaatgaaactaaagatgtcatgaagaagagagctagtgagcttga 622 ||||||||||||||||| | || || |||||||||| ||||||||||||||| Sbjct: 129891 agcaaaatcaatgaaacaagggacgtgatgaagaagaaagctagtgagcttga 129943 Score = 204 bits (103), Expect = 3e-49 Identities = 187/215 (86%) Strand = Plus / Plus Query: 408 tctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaa 467 ||||| |||||||| || | ||||||||||||||||||||||||||||| || || || Sbjct: 140466 tctcttgatgaggagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgag 140525 Query: 468 gcaatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgag 527 || |||| ||| ||||| |||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 140526 gccatctgtcttggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgag 140585 Query: 528 atggaaagccatgaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaact 587 ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 140586 atggagagccatgaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaaca 140645 Query: 588 aaagatgtcatgaagaagagagctagtgagcttga 622 | ||||| |||||||||| ||| ||||||||||| Sbjct: 140646 agggatgtgatgaagaagaaagccagtgagcttga 140680 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatctgg 679 |||||| | ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 130221 gatggaaagaggaaaacttgacaaaggaggatactcatcaatatctgg 130268 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 128 ggtggttcttgctgcttccatcat 151 |||||||||||||||||||||||| Sbjct: 138833 ggtggttcttgctgcttccatcat 138856 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 128 ggtggttcttgctgcttccatcat 151 |||||||||||||||||||||||| Sbjct: 128661 ggtggttcttgctgcttccatcat 128684 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 |||||| | ||| ||||| ||||||||||||||||| ||||||| Sbjct: 140967 gatggaaagaggaaaacttgacaaaggaggatactcggcaatatc 141011
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 246 bits (124), Expect = 8e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||||||||| | |||||||||||| || || ||||||||||| |||||||| Sbjct: 14049000 agcacttgtttcaagacagtttgttgacatgtctcgcataaggattgaaggattacttgc 14049059 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 14049060 agctttccccaaactggttggaactgggaagcagcacacttatgttgagactgaaaatgt 14049119 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||| ||||||||||| || || |||||||| || |||| |||||||||||||||||||| Sbjct: 14049120 tcgctatgtttatcagccaatagaaggcctgtacttgctacttatcacaaacaagcagag 14049179 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 14049180 caatattcttgaagatctggacaccttgaggctgctctctaagcttgt 14049227 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||||||||| | |||||||||||| || || ||||||||||| |||||||| Sbjct: 14059173 agcacttgtttcaagacagtttgttgacatgtctcgcataaggattgaaggattacttgc 14059232 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 14059233 agctttccccaaactggttggaactgggaagcagcacacttatgttgagactgaaaatgt 14059292 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||| ||||||||||| || || |||||||| || |||| |||||||| ||||||||||| Sbjct: 14059293 tcgctatgtttatcagccaatagaaggcctgtacttgctacttatcactaacaagcagag 14059352 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 14059353 caatattcttgaagatctggacaccttgaggctgctctctaagcttgt 14059400 Score = 228 bits (115), Expect = 2e-56 Identities = 204/233 (87%), Gaps = 3/233 (1%) Strand = Plus / Plus Query: 393 gtgcctgaatact---cgtctctggatgaggatagtatctgtaaaacagcatttgagctt 449 ||||||||||||| | ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 14049634 gtgcctgaatactccccctctcttgatgaggagggtgtttgtaaaacagcatttgagctt 14049693 Query: 450 atatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaacagtgcagcaa 509 |||||||| || || ||||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 14049694 atatttgccttcgatgaagccatctctcttggaaataaggaaaatgtaacagttcaacaa 14049753 Query: 510 gtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctgatgatgcag 569 ||||| ||||| ||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 14049754 gtcaaacaatattgcgagatggagagccatgaagagaaggctcacaagctgatgatgcaa 14049813 Query: 570 agcaaaatcaatgaaactaaagatgtcatgaagaagagagctagtgagcttga 622 ||||||||||||||||| | || || |||||||||| ||||||||||||||| Sbjct: 14049814 agcaaaatcaatgaaacaagggacgtgatgaagaagaaagctagtgagcttga 14049866 Score = 204 bits (103), Expect = 3e-49 Identities = 187/215 (86%) Strand = Plus / Plus Query: 408 tctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaa 467 ||||| |||||||| || | ||||||||||||||||||||||||||||| || || || Sbjct: 14060390 tctcttgatgaggagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgag 14060449 Query: 468 gcaatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgag 527 || |||| ||| ||||| |||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 14060450 gccatctgtcttggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgag 14060509 Query: 528 atggaaagccatgaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaact 587 ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 14060510 atggagagccatgaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaaca 14060569 Query: 588 aaagatgtcatgaagaagagagctagtgagcttga 622 | ||||| |||||||||| ||| ||||||||||| Sbjct: 14060570 agggatgtgatgaagaagaaagccagtgagcttga 14060604 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatctgg 679 |||||| | ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 14050144 gatggaaagaggaaaacttgacaaaggaggatactcatcaatatctgg 14050191 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 128 ggtggttcttgctgcttccatcat 151 |||||||||||||||||||||||| Sbjct: 14058757 ggtggttcttgctgcttccatcat 14058780 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 128 ggtggttcttgctgcttccatcat 151 |||||||||||||||||||||||| Sbjct: 14048584 ggtggttcttgctgcttccatcat 14048607 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 |||||| | ||| ||||| ||||||||||||||||| ||||||| Sbjct: 14060891 gatggaaagaggaaaacttgacaaaggaggatactcggcaatatc 14060935 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggcggcggcccggcgcatctcctc 62 ||||||||| |||||||||||||| Sbjct: 4876890 ggcggcggcacggcgcatctcctc 4876867
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||||||||| | |||||||||||| || || ||||||||||| |||||||| Sbjct: 6728 agcacttgtttcaagacagtttgttgacatgtctcgcataaggattgaaggattacttgc 6787 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||| || Sbjct: 6788 agctttccccaaactggttggaactgggaagcagcacacttatgttgagactgaaaatgt 6847 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||| ||||||||||| || || |||||||| || |||| |||||||| ||||||||||| Sbjct: 6848 tcgctatgtttatcagccaatagaaggcctgtacttgctacttatcactaacaagcagag 6907 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 6908 caatattcttgaagatctggacaccttgaggctgctctctaagcttgt 6955 Score = 204 bits (103), Expect = 3e-49 Identities = 187/215 (86%) Strand = Plus / Plus Query: 408 tctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaa 467 ||||| |||||||| || | ||||||||||||||||||||||||||||| || || || Sbjct: 7945 tctcttgatgaggagggtgtttgtaaaacagcatttgagcttatatttgccttcgatgag 8004 Query: 468 gcaatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgag 527 || |||| ||| ||||| |||||||| |||||||| || |||||||| ||||| || ||| Sbjct: 8005 gccatctgtcttggaaataaggaaaacgtaacagtccaacaagtcaaacaatattgtgag 8064 Query: 528 atggaaagccatgaagagaaggcgcataagctgatgatgcagagcaaaatcaatgaaact 587 ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 8065 atggagagccatgaagagaaggcgcacaagctgatgatgcaaagcaaaatcaatgaaaca 8124 Query: 588 aaagatgtcatgaagaagagagctagtgagcttga 622 | ||||| |||||||||| ||| ||||||||||| Sbjct: 8125 agggatgtgatgaagaagaaagccagtgagcttga 8159 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 128 ggtggttcttgctgcttccatcat 151 |||||||||||||||||||||||| Sbjct: 6312 ggtggttcttgctgcttccatcat 6335 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 |||||| | ||| ||||| ||||||||||||||||| ||||||| Sbjct: 8446 gatggaaagaggaaaacttgacaaaggaggatactcggcaatatc 8490
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Minus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||| ||||| |||||||||||| | || || ||||||||||| |||||||| Sbjct: 17119210 agcacttgtttctagacagtatgttgacatgactcgcataaggattgaaggattacttgc 17119151 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||| || Sbjct: 17119150 agcattccctaaacttgttggaaatggaaagcagcacacttacattgagactgaaaatgt 17119091 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||||| ||||| ||||||||||||||| ||||||| | ||||||||||||| || || Sbjct: 17119090 ccgttacgtttaccaacctattgaaggcttatatcttgtagttatcacaaacaaacaaag 17119031 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 |||||||||||| ||||| ||||| |||||||||| ||||||||||| Sbjct: 17119030 taatattcttgaggatctcgacacgttgaggctactctccaagcttgt 17118983 Score = 115 bits (58), Expect = 2e-22 Identities = 186/226 (82%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 408 tctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaa 467 ||||| ||||| ||| || | ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 17118485 tctctcgatgacgatggtgtttgtaaaacagcttttgagcttatatttgcttttgacgaa 17118426 Query: 468 gcaatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgag 527 || || ||||| ||||| |||||||| |||||||| || || ||||| |||| || ||| Sbjct: 17118425 gccatttctcttggaaataaggaaaaagtaacagttcaacaggtcaaagaatattgtgag 17118366 Query: 528 atggaaagccatgaagagaaggcgcataagctgatgatgc-agagcaaaatcaatgaaac 586 ||||| || |||||||| || | | |||| |||||||| |||| |||||||| ||||| Sbjct: 17118365 atggatagtgttgaagagatggagtacaagcagatgatgcaagag-aaaatcaaggaaac 17118307 Query: 587 taaagatgtcatgaagaagagagctagtgagcttgacaaaatcagg 632 |||||| | |||||||||| || || |||| |||| |||| |||| Sbjct: 17118306 caaagattttatgaagaagaaagttattgagattgagaaaaccagg 17118261 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17117804 gatggagaaaggcaaacataacaaaggaggatactcatcaatatc 17117760 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 128 ggtggttcttgctgcttccatcatctcgaaatctggaaaag 168 |||||||||||||||||| |||||||| || || ||||||| Sbjct: 17119605 ggtggttcttgctgcttctatcatctcaaagtcaggaaaag 17119565
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Minus Query: 167 agcacttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgc 226 |||||||||||| ||||| |||||||||||| | || || ||||||||||| |||||||| Sbjct: 43065 agcacttgtttctagacagtatgttgacatgactcgcataaggattgaaggattacttgc 43006 Query: 227 agcattcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgt 286 ||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||| || Sbjct: 43005 agcattccctaaacttgttggaaatggaaagcagcacacttacattgagactgaaaatgt 42946 Query: 287 tcgttatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagag 346 ||||| ||||| ||||||||||||||| ||||||| | ||||||||||||| || || Sbjct: 42945 ccgttacgtttaccaacctattgaaggcttatatcttgtagttatcacaaacaaacaaag 42886 Query: 347 taatattcttgaagatctggacacactgaggctactatccaagcttgt 394 |||||||||||| ||||| ||||| |||||||||| ||||||||||| Sbjct: 42885 taatattcttgaggatctcgacacgttgaggctactctccaagcttgt 42838 Score = 115 bits (58), Expect = 2e-22 Identities = 186/226 (82%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 408 tctctggatgaggatagtatctgtaaaacagcatttgagcttatatttgcatttgacgaa 467 ||||| ||||| ||| || | ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 42340 tctctcgatgacgatggtgtttgtaaaacagcttttgagcttatatttgcttttgacgaa 42281 Query: 468 gcaatctctctcggaaacaaggaaaatgtaacagtgcagcaagtcaagcaatactgcgag 527 || || ||||| ||||| |||||||| |||||||| || || ||||| |||| || ||| Sbjct: 42280 gccatttctcttggaaataaggaaaaagtaacagttcaacaggtcaaagaatattgtgag 42221 Query: 528 atggaaagccatgaagagaaggcgcataagctgatgatgc-agagcaaaatcaatgaaac 586 ||||| || |||||||| || | | |||| |||||||| |||| |||||||| ||||| Sbjct: 42220 atggatagtgttgaagagatggagtacaagcagatgatgcaagag-aaaatcaaggaaac 42162 Query: 587 taaagatgtcatgaagaagagagctagtgagcttgacaaaatcagg 632 |||||| | |||||||||| || || |||| |||| |||| |||| Sbjct: 42161 caaagattttatgaagaagaaagttattgagattgagaaaaccagg 42116 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 41659 gatggagaaaggcaaacataacaaaggaggatactcatcaatatc 41615 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 128 ggtggttcttgctgcttccatcatctcgaaatctggaaaag 168 |||||||||||||||||| |||||||| || || ||||||| Sbjct: 43460 ggtggttcttgctgcttctatcatctcaaagtcaggaaaag 43420
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Minus Query: 171 cttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagca 230 |||||||| ||||||| |||||||||||||||||| ||||| || ||| | ||||||||| Sbjct: 35699242 cttgtttcgagacaatttgttgacatgtcccggataaggatcgatgggctgcttgcagca 35699183 Query: 231 ttcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgt 290 || ||||| || || |||| ||| ||||| || |||||| |||||||||||| |||||| Sbjct: 35699182 tttccgaagctggtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgt 35699123 Query: 291 tatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaat 350 ||||| |||||||| ||||||| || ||| |||| || |||||||| ||||| ||||| Sbjct: 35699122 tatgtctatcaaccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaac 35699063 Query: 351 attcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||| || | |||||||| ||||||||||| Sbjct: 35699062 attcttgaagatctggatactttaaggctactctccaagcttgt 35699019 Score = 77.8 bits (39), Expect = 4e-11 Identities = 143/175 (81%), Gaps = 2/175 (1%) Strand = Plus / Minus Query: 427 tctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctcggaaaca 486 ||||||| ||||||| |||||| | ||||| ||| ||||| || ||||| ||||||| Sbjct: 35698650 tctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctcttggaaaca 35698591 Query: 487 aggaaaatgtaacagt-gcagcaagtcaagcaatactgcgagatggaaagccatgaagag 545 | || || ||||| || ||| ||||| || |||||||| || ||||| ||||||||||| Sbjct: 35698590 aagagaacgtaactgttgca-caagttaaacaatactgtgaaatggagagccatgaagaa 35698532 Query: 546 aaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatga 600 ||| ||| |||||| | ||||| |||||||| ||||||||||| |||||||||| Sbjct: 35698531 aagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcatga 35698477 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 128 ggtggttcttgctgcttccatcatctcgaaatctggaaaag 168 |||||||||||| ||||| || || ||||| |||||||||| Sbjct: 35699629 ggtggttcttgcagcttctattatatcgaagtctggaaaag 35699589
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Minus Query: 171 cttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagca 230 |||||||| ||||||| |||||||||||||||||| ||||| || ||| | ||||||||| Sbjct: 102579 cttgtttcgagacaatttgttgacatgtcccggataaggatcgatgggctgcttgcagca 102520 Query: 231 ttcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgt 290 || ||||| || || |||| ||| ||||| || |||||| |||||||||||| |||||| Sbjct: 102519 tttccgaagctggtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgt 102460 Query: 291 tatgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaat 350 ||||| |||||||| ||||||| || ||| |||| || |||||||| ||||| ||||| Sbjct: 102459 tatgtctatcaaccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaac 102400 Query: 351 attcttgaagatctggacacactgaggctactatccaagcttgt 394 ||||||||||||||||| || | |||||||| ||||||||||| Sbjct: 102399 attcttgaagatctggatactttaaggctactctccaagcttgt 102356 Score = 77.8 bits (39), Expect = 4e-11 Identities = 143/175 (81%), Gaps = 2/175 (1%) Strand = Plus / Minus Query: 427 tctgtaaaacagcatttgagcttatatttgcatttgacgaagcaatctctctcggaaaca 486 ||||||| ||||||| |||||| | ||||| ||| ||||| || ||||| ||||||| Sbjct: 101987 tctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctcttggaaaca 101928 Query: 487 aggaaaatgtaacagt-gcagcaagtcaagcaatactgcgagatggaaagccatgaagag 545 | || || ||||| || ||| ||||| || |||||||| || ||||| ||||||||||| Sbjct: 101927 aagagaacgtaactgttgca-caagttaaacaatactgtgaaatggagagccatgaagaa 101869 Query: 546 aaggcgcataagctgatgatgcagagcaaaatcaatgaaactaaagatgtcatga 600 ||| ||| |||||| | ||||| |||||||| ||||||||||| |||||||||| Sbjct: 101868 aagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcatga 101814 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 128 ggtggttcttgctgcttccatcatctcgaaatctggaaaag 168 |||||||||||| ||||| || || ||||| |||||||||| Sbjct: 102966 ggtggttcttgcagcttctattatatcgaagtctggaaaag 102926
>gb|BT013171.1| Lycopersicon esculentum clone 134238R, mRNA sequence Length = 1995 Score = 83.8 bits (42), Expect = 7e-13 Identities = 219/278 (78%) Strand = Plus / Plus Query: 126 atggtggttcttgctgcttccatcatctcgaaatctggaaaagcacttgtttcaagacaa 185 ||||| ||||| || |||||||| || || |||||||| ||||| ||||| || || ||| Sbjct: 163 atggttgttctagcggcttccataatttctaaatctggcaaagctcttgtctcgaggcaa 222 Query: 186 tatgttgacatgtcccggattaggattgaagggttacttgcagcattcccgaaacttgtt 245 | |||||| ||||| || || || |||||||| | |||||||| || || ||| | ||| Sbjct: 223 tttgttgatatgtctcgtataagaattgaaggatatcttgcagcttttcccaaattggtt 282 Query: 246 ggaactgggaagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaacct 305 || | || |||||||| || ||| |||||||||||| || || ||||||||||| || Sbjct: 283 ggtataggaaagcagcatacatatattgagactgaaaatgtgcgatatgtttatcagccg 342 Query: 306 attgaaggcctatatctgctgcttatcacaaacaagcagagtaatattcttgaagatctg 365 || ||| || || |||| ||| | || ||||| ||||| || |||||||||||| || Sbjct: 343 atagaatctctgtacttgctccttgtgaccaacaaacagagcaacattcttgaagatttg 402 Query: 366 gacacactgaggctactatccaagcttgtgcctgaata 403 || ||||||||||| || || || || ||||||||||| Sbjct: 403 gagacactgaggctgctgtctaaactagtgcctgaata 440 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 ||||||||||| ||||||||||| |||| |||||||| || ||||||||||||| ||| Sbjct: 481 tttgagcttatttttgcatttgatgaagtgatctctcttgggcacaaggaaaatgttaca 540 Query: 501 gtgcagcaagtcaagcaatactgcgagatgga 532 || ||||||||||| ||||| || ||||| Sbjct: 541 gttacacaagtcaagcagtactgtgaaatgga 572 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 579 aatgaaactaaagatgtcatgaag 602 ||||||||||| |||||||||||| Sbjct: 619 aatgaaactaaggatgtcatgaag 642
>ref|NM_001036759.1| Arabidopsis thaliana unknown protein AT5G05010 transcript variant AT5G05010.2 mRNA, complete cds Length = 2004 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 414 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 473 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 474 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 533 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 534 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 575 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 142 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 201 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 202 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 261 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 262 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 321 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 322 ttctagaagacctgg 336
>ref|NM_120583.3| Arabidopsis thaliana unknown protein AT5G05010 transcript variant AT5G05010.1 mRNA, complete cds Length = 2034 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 444 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 503 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 504 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 563 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 564 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 605 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 172 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 231 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 232 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 291 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 292 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 351 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 352 ttctagaagacctgg 366
>gb|AY114626.1| Arabidopsis thaliana coatomer delta subunit (delta-coat protein) (delta-COP) (At5g05010) mRNA, complete cds Length = 1653 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 319 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 378 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 379 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 438 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 439 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 480 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 47 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 106 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 107 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 166 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 167 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 226 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 227 ttctagaagacctgg 241
>gb|AY054658.1| Arabidopsis thaliana coatomer delta subunit (delta-coat protein) (delta-COP) (At5g05010; MUG13.13) mRNA, complete cds Length = 1848 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 431 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 490 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 491 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 550 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 551 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 592 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 159 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 218 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 219 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 278 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 279 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 338 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 339 ttctagaagacctgg 353
>gb|AY054464.1| Arabidopsis thaliana coatomer delta subunit (delta-coat protein) (delta-COP) (At5g05010; MUG13.13) mRNA, complete cds Length = 1913 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 427 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 486 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 487 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 546 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 547 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 588 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 155 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 214 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 215 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 274 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 275 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 334 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 335 ttctagaagacctgg 349
>emb|BX831745.1|CNS09YPA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1913 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 443 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 502 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 503 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 562 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 563 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 171 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 230 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 231 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 290 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 291 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 350 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 351 ttctagaagacctgg 365
>dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13 Length = 86630 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacgaagcaatctctctcggaaacaaggaaaatgtaaca 500 |||||||| |||||||||||||| |||| || ||||| || ||||||||| ||| ||| Sbjct: 45050 tttgagctcatatttgcatttgatgaagtcatatctcttgggcacaaggaaagtgtgaca 45109 Query: 501 gtgcagcaagtcaagcaatactgcgagatggaaagccatgaagagaaggcgcataagctg 560 || || || ||||| || || || |||||||| ||||| |||||| |||||| ||| Sbjct: 45110 gttgcccaggtgaagcagtattgtgaaatggaaagtcatgaggagaagttgcataaactg 45169 Query: 561 atgatgcagagcaaaatcaatgaaactaaagatgtcatgaag 602 | ||||||||||| |||||||| ||||| || || |||||| Sbjct: 45170 gttatgcagagcaagatcaatgacactaaggacgtgatgaag 45211 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Plus Query: 172 ttgtttcaagacaatatgttgacatgtcccggattaggattgaagggttacttgcagcat 231 ||||||| ||||| ||||| || |||||||| || || || ||||| |||||||||| | Sbjct: 44628 ttgtttccagacactatgtggatatgtcccgtatcagaatcgaaggtctacttgcagctt 44687 Query: 232 tcccgaaacttgttggaactgggaagcagcacacttatcttgagactgaaagcgttcgtt 291 | || || || ||||||| || |||||||| || ||| | ||||| || | || || | Sbjct: 44688 ttcctaagctggttggaatgggaaagcagcatacctatatcgagacggagaatgtgcgat 44747 Query: 292 atgtttatcaacctattgaaggcctatatctgctgcttatcacaaacaagcagagtaata 351 |||||||||| |||||||||| || | ||||| ||| | |||| ||||||||||| | Sbjct: 44748 atgtttatcagcctattgaagctctgttcctgcttcttgttacaactaagcagagtaaca 44807 Query: 352 ttcttgaagatctgg 366 |||| ||||| |||| Sbjct: 44808 ttctagaagacctgg 44822
>ref|NM_148065.1| Arabidopsis thaliana unknown protein AT5G40855 mRNA, complete cds Length = 237 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 441 tttgagcttatatttgcatttgacga 466 |||||||| ||||||||||||||||| Sbjct: 180 tttgagctgatatttgcatttgacga 155
>gb|BC056030.1| Xenopus laevis archain 1, mRNA (cDNA clone MGC:68969 IMAGE:4959758), complete cds Length = 2215 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 271 ttgagactgaaagcgttcgttatgtttatcaacc 304 ||||||||||||| ||||| |||||||| ||||| Sbjct: 198 ttgagactgaaagtgttcggtatgtttaccaacc 231
>ref|NM_001016978.2| Xenopus tropicalis archain (arcn1), mRNA Length = 2244 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 255 aagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaacc 304 ||||||||||| | | ||||||| ||||| ||||| |||||||| ||||| Sbjct: 169 aagcagcacacatttgttgagacagaaagtgttcggtatgtttaccaacc 218
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 441 tttgagcttatatttgcatttgacga 466 |||||||| ||||||||||||||||| Sbjct: 43617 tttgagctgatatttgcatttgacga 43642
>gb|AC099636.8| Mus musculus chromosome 19, clone RP24-149H13, complete sequence Length = 141121 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 584 aactaaagatgtcatgaagaag 605 |||||||||||||||||||||| Sbjct: 28054 aactaaagatgtcatgaagaag 28075
>emb|CR848379.2| Xenopus tropicalis finished cDNA, clone TNeu068j12 Length = 2244 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 255 aagcagcacacttatcttgagactgaaagcgttcgttatgtttatcaacc 304 ||||||||||| | | ||||||| ||||| ||||| |||||||| ||||| Sbjct: 169 aagcagcacacatttgttgagacagaaagtgttcggtatgtttaccaacc 218
>gb|AC124632.11| Mus musculus chromosome 19, clone RP23-445I14, complete sequence Length = 178671 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 584 aactaaagatgtcatgaagaag 605 |||||||||||||||||||||| Sbjct: 80315 aactaaagatgtcatgaagaag 80294
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 gcgggcggcggcccggcgcatc 57 |||||||||||||||||||||| Sbjct: 2875164 gcgggcggcggcccggcgcatc 2875143
>emb|AL157781.8| Human DNA sequence from clone RP11-115N6 on chromosome 10, complete sequence Length = 119502 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 gggatcagcaaagctattgaaaatg 128 |||||||||||||||| |||||||| Sbjct: 90890 gggatcagcaaagctaatgaaaatg 90914
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 570 agcaaaatcaatgaaactaaagatg 594 |||||||||||| |||||||||||| Sbjct: 295903 agcaaaatcaataaaactaaagatg 295927
>gb|AC023102.6| Homo sapiens chromosome 8, clone RP11-414L17, complete sequence Length = 175263 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aactaaagatgtcatgaagaa 604 ||||||||||||||||||||| Sbjct: 148988 aactaaagatgtcatgaagaa 148968
>dbj|AK104894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G01, full insert sequence Length = 1277 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 632 gatggagaaaggcaaactcgacaaaggaggatactcatcaatatc 676 |||||| | ||| ||||| ||||||||||||||||| ||||||| Sbjct: 3 gatggaaagaggaaaacttgacaaaggaggatactcggcaatatc 47
>emb|AL929548.8| Zebrafish DNA sequence from clone CH211-159E17, complete sequence Length = 168842 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ctattgaaaatggtggttctt 137 ||||||||||||||||||||| Sbjct: 125916 ctattgaaaatggtggttctt 125936
>ref|XM_360443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10755.4) partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ggggatcagcaaagctattg 122 |||||||||||||||||||| Sbjct: 942 ggggatcagcaaagctattg 961
>gb|AC091463.9| Mus musculus chromosome 16, clone RP23-301D7, complete sequence Length = 232419 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 atggaaagccatgaagagaa 547 |||||||||||||||||||| Sbjct: 123640 atggaaagccatgaagagaa 123659
>gb|AC094507.9| Rattus norvegicus 1 BAC CH230-4E15 (Children's Hospital Oakland Research Institute) complete sequence Length = 98521 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 caagacaatatgttgacatgtccc 201 |||||||||||||| ||||||||| Sbjct: 97321 caagacaatatgttcacatgtccc 97298
>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence Length = 185754 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 567 cagagcaaaatcaatgaaactaaa 590 ||||| |||||||||||||||||| Sbjct: 74287 cagagaaaaatcaatgaaactaaa 74310
>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence Length = 178898 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 570 agcaaaatcaatgaaactaaagat 593 ||||||||||||||||| |||||| Sbjct: 121444 agcaaaatcaatgaaaccaaagat 121467
>gb|AC124496.3| Mus musculus BAC clone RP23-471J10 from chromosome 3, complete sequence Length = 185141 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 490 aaaatgtaacagtgcagcaagtca 513 ||||||||||| |||||||||||| Sbjct: 154448 aaaatgtaacactgcagcaagtca 154425
>gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complete sequence Length = 213701 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 490 aaaatgtaacagtgcagcaagtca 513 ||||||||||| |||||||||||| Sbjct: 13090 aaaatgtaacactgcagcaagtca 13067
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland Research Institute) complete sequence Length = 143705 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 caagacaatatgttgacatgtccc 201 |||||||||||||| ||||||||| Sbjct: 803 caagacaatatgttcacatgtccc 780
>emb|BX629352.5| Human DNA sequence from clone WI2-80267E6 on chromosome 9, complete sequence Length = 24089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gatgatgcagagcaaaatca 579 |||||||||||||||||||| Sbjct: 13680 gatgatgcagagcaaaatca 13699
>emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on chromosome 1 Contains the 3' end of the ATF6 gene for activating transcription factor 6, a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)(PSME1) pseudogene, the 3' end of a novel gene (DKFZP586L151) and a CpG island, complete sequence Length = 211662 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ggatagtatctgtaaaacag 438 |||||||||||||||||||| Sbjct: 56129 ggatagtatctgtaaaacag 56110 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ggatagtatctgtaaaacag 438 |||||||||||||||||||| Sbjct: 56025 ggatagtatctgtaaaacag 56006
>emb|AL356652.19| Human DNA sequence from clone RP11-42O4 on chromosome 20 Contains part of the gene for a novel glycosyl hydrolase family 47 protein and the PROCR gene for endothelial protein C receptor (EPCR), complete sequence Length = 50217 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gttatgtttatcaacctatt 308 |||||||||||||||||||| Sbjct: 20071 gttatgtttatcaacctatt 20052
>ref|XM_774917.1| PREDICTED: Strongylocentrotus purpuratus similar to archain, transcript variant 1 (LOC575187), mRNA Length = 1949 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 agtaatattcttgaagatctggacacactgaggcta 380 ||||| || |||||||||||||| || ||||||||| Sbjct: 300 agtaacatccttgaagatctggaaaccctgaggcta 335
>ref|XM_796607.1| PREDICTED: Strongylocentrotus purpuratus similar to archain, transcript variant 2 (LOC575187), mRNA Length = 1967 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 agtaatattcttgaagatctggacacactgaggcta 380 ||||| || |||||||||||||| || ||||||||| Sbjct: 300 agtaacatccttgaagatctggaaaccctgaggcta 335
>ref|XM_938654.1| PREDICTED: Homo sapiens hypothetical protein LOC649590 (LOC649590), mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gatgatgcagagcaaaatca 579 |||||||||||||||||||| Sbjct: 66 gatgatgcagagcaaaatca 47
>ref|XM_927040.1| PREDICTED: Homo sapiens hypothetical protein LOC643750 (LOC643750), mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gatgatgcagagcaaaatca 579 |||||||||||||||||||| Sbjct: 66 gatgatgcagagcaaaatca 47
>ref|XM_926352.1| PREDICTED: Homo sapiens hypothetical protein LOC642968 (LOC642968), mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gatgatgcagagcaaaatca 579 |||||||||||||||||||| Sbjct: 66 gatgatgcagagcaaaatca 47
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 gcggcggcccggcgcatctcctcg 63 ||||||||||||| |||||||||| Sbjct: 1820462 gcggcggcccggcccatctcctcg 1820485
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccggcgggcggcggcccggc 52 |||||||||||||||||||| Sbjct: 1807751 ccggcgggcggcggcccggc 1807770 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 cggcgggcggcggcccggcg 53 |||||||||||||||||||| Sbjct: 1387832 cggcgggcggcggcccggcg 1387813
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 gaaaatgtaacagtgcagca 508 |||||||||||||||||||| Sbjct: 148625 gaaaatgtaacagtgcagca 148644
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 26 gtagnatccggcgggcggcggcc 48 |||| |||||||||||||||||| Sbjct: 24297239 gtaggatccggcgggcggcggcc 24297217
>gb|AC062017.6| Homo sapiens BAC clone RP11-110K9 from 2, complete sequence Length = 180223 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 567 cagagcaaaatcaatgaaactaaa 590 ||||| |||||||||||||||||| Sbjct: 124516 cagagaaaaatcaatgaaactaaa 124539
>ref|XM_576547.1| PREDICTED: Rattus norvegicus similar to FLJ42986 protein (LOC501127), mRNA Length = 1855 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tgaaaatggtggttcttgctgctt 144 |||||||||||| ||||||||||| Sbjct: 143 tgaaaatggtgggtcttgctgctt 120
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 40.1 bits (20), Expect = 9.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 26 gtagnatccggcgggcggcggcc 48 |||| |||||||||||||||||| Sbjct: 127328 gtaggatccggcgggcggcggcc 127306
>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414C05 Length = 123105 Score = 40.1 bits (20), Expect = 9.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 26 gtagnatccggcgggcggcggcc 48 |||| |||||||||||||||||| Sbjct: 21869 gtaggatccggcgggcggcggcc 21847
>dbj|AK072464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120F04, full insert sequence Length = 919 Score = 40.1 bits (20), Expect = 9.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 26 gtagnatccggcgggcggcggcc 48 |||| |||||||||||||||||| Sbjct: 341 gtaggatccggcgggcggcggcc 363
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gaaacaaggaaaatgtaaca 500 |||||||||||||||||||| Sbjct: 143420 gaaacaaggaaaatgtaaca 143401
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tattgaaaatggtggttctt 137 |||||||||||||||||||| Sbjct: 685933 tattgaaaatggtggttctt 685914
>gb|AC141868.4| Mus musculus BAC clone RP24-418L21 from 8, complete sequence Length = 188063 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 519 tactgcgagatggaaagccatgaa 542 ||||| |||||||||||||||||| Sbjct: 112434 tactgagagatggaaagccatgaa 112411
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 ggcggcggcccggcgcatctcctc 62 ||||||||| |||||||||||||| Sbjct: 149298 ggcggcggcacggcgcatctcctc 149275 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,396,117 Number of Sequences: 3902068 Number of extensions: 6396117 Number of successful extensions: 133778 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133182 Number of HSP's gapped (non-prelim): 576 length of query: 679 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 656 effective length of database: 17,143,297,704 effective search space: 11246003293824 effective search space used: 11246003293824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
