Clone Name	bags15h22
Clone Library Name	barley_pub

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No.	Definition	Score (bits)	E Value
1	NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD p...	47	3e-05
2	SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S...	45	2e-04
3	NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD p...	44	3e-04
4	SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S...	43	5e-04
5	RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U...	42	0.001
6	RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U...	42	0.001
7	SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Ser...	42	0.001
8	RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin...	41	0.002
9	HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor (Histid...	40	0.004
10	GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)	40	0.005
11	PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helica...	40	0.005
12	DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-...	39	0.011
13	K0853_HUMAN (Q5T200) Protein KIAA0853	38	0.019
14	EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (...	37	0.025
15	STC_DROME (P40798) Protein shuttle craft	37	0.025
16	GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon...	37	0.033
17	EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb...	37	0.042
18	EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (...	37	0.042
19	ACCD_OENHO (Q9MTL3) Acetyl-coenzyme A carboxylase carboxyl trans...	37	0.042
20	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	36	0.055
21	PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
22	PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
23	PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
24	PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
25	PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
26	PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi...	36	0.072
27	PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ...	36	0.072
28	BFR2_CRYNE (Q5KBS9) Protein BFR2	36	0.072
29	CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C...	35	0.095
30	CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C...	35	0.095
31	INO80_YEAST (P53115) Putative DNA helicase INO80 (EC 3.6.1.-) (I...	35	0.095
32	BFR2_EMENI (Q5AW04) Protein bfr2	35	0.095
33	ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in...	35	0.095
34	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	35	0.095
35	SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB s...	35	0.12
36	SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (...	35	0.12
37	DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-depend...	35	0.12
38	SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5...	35	0.16
39	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	35	0.16
40	ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro...	35	0.16
41	FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	35	0.16
42	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	35	0.16
43	FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-l...	35	0.16
44	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	35	0.16
45	FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	35	0.16
46	PLS_STAAU (P80544) Surface protein precursor (Plasmin-sensitive ...	35	0.16
47	PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi...	35	0.16
48	FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	35	0.16
49	AN32B_SHEEP (Q6A1I3) Acidic leucine-rich nuclear phosphoprotein ...	35	0.16
50	PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi...	34	0.21
51	PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind...	34	0.21
52	PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.21
53	PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.21
54	PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi...	34	0.21
55	RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-ri...	34	0.21
56	CLFB_STAAN (Q7A382) Clumping factor B precursor (Fibrinogen-bind...	34	0.21
57	CLFB_STAAM (Q99R07) Clumping factor B precursor (Fibrinogen-bind...	34	0.21
58	CLFB_STAAU (O86476) Clumping factor B precursor (Fibrinogen-bind...	34	0.21
59	CLFB_STAAC (Q5HCR7) Clumping factor B precursor (Fibrinogen-bind...	34	0.21
60	TOP1_RAT (Q9WUL0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoiso...	34	0.28
61	TOP1_MOUSE (Q04750) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	34	0.28
62	RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytoki...	34	0.28
63	PQBP1_HUMAN (O60828) Polyglutamine-binding protein 1 (Polyglutam...	34	0.28
64	CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25	34	0.28
65	SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB s...	34	0.28
66	NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA...	34	0.28
67	PLS_STAAC (Q5HJU7) Putative surface protein SACOL0050 precursor	33	0.36
68	NAM8_YEAST (Q00539) Protein NAM8	33	0.36
69	ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens...	33	0.36
70	K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)	33	0.36
71	SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Ar...	33	0.36
72	PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-...	33	0.47
73	CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-bind...	33	0.47
74	CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-bind...	33	0.47
75	RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U...	33	0.47
76	MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (M...	33	0.47
77	MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein ...	33	0.47
78	PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helica...	33	0.47
79	CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-bind...	33	0.47
80	PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-...	33	0.61
81	HANG_DROME (Q9VXG1) Zinc finger protein hangover	33	0.61
82	GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)	33	0.61
83	SNWA_DICDI (P54705) Protein snwA	33	0.61
84	YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear pro...	33	0.61
85	ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in...	33	0.61
86	ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2	32	0.80
87	RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytoki...	32	0.80
88	WDR43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)	32	0.80
89	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	32	0.80
90	MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein ...	32	0.80
91	ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2	32	0.80
92	SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2	32	1.0
93	PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b...	32	1.0
94	CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-bind...	32	1.0
95	NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NU...	32	1.4
96	PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi...	32	1.4
97	DEK_HUMAN (P35659) Protein DEK	32	1.4
98	ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur...	32	1.4
99	PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ...	32	1.4
100	GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7	32	1.4
101	BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	32	1.4
102	SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1	32	1.4
103	ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec...	32	1.4
104	NOP8_YEAST (Q08287) 60S ribosome subunit biogenesis protein NOP8	32	1.4
105	TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein	32	1.4
106	CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpresse...	32	1.4
107	CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-bind...	31	1.8
108	YKI8_YEAST (P36076) Hypothetical protein YKL088w	31	1.8
109	LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Le...	31	1.8
110	BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	31	1.8
111	CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-bind...	31	1.8
112	ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)	31	1.8
113	CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25	31	1.8
114	TRHY_HUMAN (Q07283) Trichohyalin	31	1.8
115	ARP8_YEAST (Q12386) Actin-like protein ARP8	31	1.8
116	CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpresse...	31	1.8
117	CROP_HUMAN (O95232) Cisplatin resistance-associated overexpresse...	31	1.8
118	CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpresse...	31	1.8
119	CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-bind...	31	1.8
120	CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-bind...	31	1.8
121	MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-depend...	31	1.8
122	CWC25_SCHPO (Q9Y805) Pre-mRNA-splicing factor cwc25 (Complexed w...	31	1.8
123	YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative spl...	31	2.3
124	CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-bind...	31	2.3
125	YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative s...	31	2.3
126	YG58_YEAST (P53313) Hypothetical 86.6 kDa protein in PFK1-TDS4 i...	31	2.3
127	YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i...	31	2.3
128	HSP83_DROPS (P04809) Heat shock protein 83 (HSP 82) (Fragment)	31	2.3
129	IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B ...	31	2.3
130	IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B ...	31	2.3
131	CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa...	31	2.3
132	CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa...	31	2.3
133	CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity fa...	31	2.3
134	CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-bind...	31	2.3
135	HSP83_DROPE (O16076) Heat shock protein 83 (HSP 82) (Fragment)	31	2.3
136	HSP83_DROMI (O16087) Heat shock protein 83 (HSP 82) (Fragment)	31	2.3
137	CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa...	31	2.3
138	PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regu...	31	2.3
139	BFR2_GIBZE (Q4I327) Protein BFR2	31	2.3
140	SPEN_DROME (Q8SX83) Protein split ends	31	2.3
141	RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)	31	2.3
142	ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur...	31	2.3
143	RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U...	30	3.0
144	ANR12_HUMAN (Q6UB98) Ankyrin repeat domain-containing protein 12...	30	3.0
145	NUCL_RAT (P13383) Nucleolin (Protein C23)	30	3.0
146	CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25	30	3.0
147	GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2	30	3.0
148	IF2_BORBU (O51741) Translation initiation factor IF-2	30	3.0
149	GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A	30	3.0
150	ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu...	30	3.0
151	ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo...	30	3.0
152	ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	30	3.0
153	HDAC1_DROME (Q94517) Histone deacetylase Rpd3 (HD) (dRPD3)	30	3.0
154	PAF1_YEAST (P38351) RNA polymerase-associated protein 1 (PAF1 pr...	30	3.0
155	HOX3_XENLA (P50476) Homeobox protein XHOX-3	30	3.0
156	GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A	30	3.0
157	ITF2_RAT (Q62655) Transcription factor 4 (Immunoglobulin transcr...	30	3.0
158	ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu...	30	3.0
159	ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha...	30	3.0
160	ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha...	30	3.0
161	ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)	30	3.0
162	ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2	30	3.0
163	ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E...	30	3.0
164	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	4.0
165	RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U...	30	4.0
166	RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U...	30	4.0
167	DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)	30	4.0
168	TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)	30	4.0
169	TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p...	30	4.0
170	GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu...	30	4.0
171	GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein	30	4.0
172	YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF463...	30	4.0
173	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	30	4.0
174	HSP83_DROPB (O16068) Heat shock protein 83 (HSP 82) (Fragment)	30	4.0
175	FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (...	30	4.0
176	CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25	30	4.0
177	VGFR2_COTJA (P52583) Vascular endothelial growth factor receptor...	30	4.0
178	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	4.0
179	PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helica...	30	4.0
180	YP158_YEAST (Q99299) Protein YPL158C	30	4.0
181	LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (C...	30	4.0
182	CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r...	30	4.0
183	CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine...	30	4.0
184	CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine...	30	4.0
185	CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine...	30	4.0
186	CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine...	30	4.0
187	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	4.0
188	MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote...	30	4.0
189	CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine...	30	4.0
190	ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor	30	4.0
191	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	30	4.0
192	ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur...	30	4.0
193	NDF1_MESAU (Q60430) Neurogenic differentiation factor 1 (NeuroD1...	30	4.0
194	YP74_CAEEL (Q09221) Hypothetical protein B0228.4	30	5.2
195	IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 s...	30	5.2
196	U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux...	30	5.2
197	TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)	30	5.2
198	CVCB_PEA (P13919) Convicilin precursor (Fragment)	30	5.2
199	ECM2_HUMAN (O94769) Extracellular matrix protein 2 precursor (Ma...	30	5.2
200	PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA ...	30	5.2
201	MAK5_CANGA (Q6FY67) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)	30	5.2
202	ARI4A_HUMAN (P29374) AT-rich interactive domain-containing prote...	30	5.2
203	VU79_HHV6U (P52529) Protein U79	30	5.2
204	GNL3_MOUSE (Q8CI11) Guanine nucleotide-binding protein-like 3 (N...	30	5.2
205	TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)	30	5.2
206	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	30	5.2
207	PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helica...	30	5.2
208	MFT1_YEAST (P33441) Mitochondrial fusion target protein	30	5.2
209	LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2	30	5.2
210	HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)	30	5.2
211	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	30	5.2
212	HSP83_DROAV (O02192) Heat shock protein 83 (HSP 82)	29	6.8
213	DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-)...	29	6.8
214	RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...	29	6.8
215	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	29	6.8
216	ITF2_HUMAN (P15884) Transcription factor 4 (Immunoglobulin trans...	29	6.8
217	NSR1_YEAST (P27476) Nuclear localization sequence-binding protei...	29	6.8
218	ITF2_MOUSE (Q60722) Transcription factor 4 (Immunoglobulin trans...	29	6.8
219	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	29	6.8
220	DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)	29	6.8
221	SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2	29	6.8
222	ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E...	29	6.8
223	YNE1_CAEEL (P30640) Hypothetical protein R08D7.1	29	6.8
224	TIM54_SCHPO (O94624) Mitochondrial import inner membrane translo...	29	6.8
225	CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity fa...	29	6.8
226	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	29	6.8
227	ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur...	29	6.8
228	ITF2_CANFA (P15881) Transcription factor 4 (Immunoglobulin trans...	29	6.8
229	SPT6H_CAEBR (Q93148) Suppressor of Ty 6 homolog (Abnormal embryo...	29	6.8
230	ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor	29	6.8
231	RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (D...	29	6.8
232	PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helica...	29	6.8
233	POST_XENLA (P27536) Posterior protein (xPO)	29	6.8
234	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	29	6.8
235	PHF3_HUMAN (Q92576) PHD finger protein 3	29	6.8
236	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	29	8.9
237	ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein ...	29	8.9
238	VPS41_ARATH (P93043) Vacuolar assembly protein VPS41 homolog	29	8.9
239	BCLF1_MOUSE (Q8K019) Bcl-2-associated transcription factor 1 (Btf)	29	8.9
240	SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein...	29	8.9
241	PQBP1_MOUSE (Q91VJ5) Polyglutamine-binding protein 1 (Polyglutam...	29	8.9
242	PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi...	29	8.9
243	CHDM_DROME (O97159) Chromodomain helicase-DNA-binding protein Mi...	29	8.9
244	VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 backgrou...	29	8.9
245	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	29	8.9
246	IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 s...	29	8.9
247	DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-depen...	29	8.9
248	PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helica...	29	8.9
249	HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li...	29	8.9
250	UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (E...	29	8.9
251	ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)	29	8.9
252	DSX_DROME (P23023) Protein doublesex	29	8.9
253	DISC_DROME (P23792) Protein disconnected	29	8.9
254	VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous...	29	8.9
255	HS90B_RAT (P34058) Heat shock protein HSP 90-beta (HSP 84)	29	8.9
256	HS90B_MOUSE (P11499) Heat shock protein HSP 90-beta (HSP 84) (Tu...	29	8.9
257	DKC1_DROME (O44081) H/ACA ribonucleoprotein complex subunit 4 (E...	29	8.9

---

>NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 375

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE-DKE 491
           D   D S DRD + +  R RD  R D DR  +   D D DR+KE  +  D +RD+E D+E
Sbjct: 189 DRSHDRSRDRDRDKERDRDRDRDR-DRDRDKDKDRDRDRDRDKERDRDRDRDRDRERDRE 247

Query: 492 QPPRK 506
            P R+
Sbjct: 248 GPFRR 252



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           S DR H+    R RD  R D DR  +   D D D++++  +  D ERD++      R+R
Sbjct: 187 SRDRSHDRSRDRDRDKER-DRDRDRDRDRDRDKDKDRDRDRDRDKERDRDRDRDRDRER 244



 Score = 35.8 bits (81), Expect = 0.072
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   DRD + D  R RD  + D DR  +   + D DR+++  +  D E      + 
Sbjct: 197 DRDRDKERDRDRDRDRDRDRDKDK-DRDRDRDRDKERDRDRDRDRDRERDREGPFRRSDS 255

Query: 495 PPRKRFSR 518
            P +R  R
Sbjct: 256 FPERRAPR 263

---

>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDL-YRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           D E +   ++D E D  R R+  +  D D+  E   D + +REK+ SK  D +R K+ K 
Sbjct: 302 DKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS 361

Query: 492 QPPRKRFS 515
           + P + ++
Sbjct: 362 RTPPRSYN 369



 Score = 33.5 bits (75), Expect = 0.36
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRG---DHDRPMETRMDSDNDR--EKENSKGYDSERDKE-DKEQPP 500
           +++ E ++ R ++  RG   D D+  E   + D ++  E+E  K ++ +RDKE +KEQ  
Sbjct: 280 EKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDK 339

Query: 501 RK 506
            K
Sbjct: 340 EK 341



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
 Frame = +3

Query: 333 SMDRDHEGDERR-ARDLYRGDH---DRPMETRMDSDNDREKENSKGYDSERDKE---DKE 491
           S  R H  D+R+  R+  +      ++  E   + + +REKE  +G + +RDKE   D+E
Sbjct: 251 SRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDRE 310

Query: 492 QPPRK 506
           +   K
Sbjct: 311 KDKEK 315



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/57 (22%), Positives = 30/57 (52%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           +R  E D  + R+  + + ++  E   + D D+E+E  +  D E+D+E + +   ++
Sbjct: 272 ERVKEKDREKEREREK-EREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 327

---

>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 380

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRG---DHDRPMETRMDSDNDREKENSKGYDSERDKE-DKEQPP 500
           S DR HE +  R RD  R    D DR  E   D D DR+++  +  D ERD++ D+E P 
Sbjct: 187 SRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPF 246

Query: 501 RK 506
           R+
Sbjct: 247 RR 248



 Score = 38.9 bits (89), Expect = 0.009
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDERRARDLYRG-DHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           HE +   DRD E D  R RD  R  D DR  +   D + DR++E  +  D E      + 
Sbjct: 192 HERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDS 251

Query: 495 PPRKRFSR 518
            P +R  R
Sbjct: 252 FPERRAPR 259

---

>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86)
          Length = 494

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D    ++ + D  + +D +  + D+  E   D D +REK+ SK  D +R KE K +
Sbjct: 289 DREKDKERGKNKDKDREKEKD-HEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKKSR 347

Query: 495 PPRKRFS 515
            P + ++
Sbjct: 348 TPPRSYN 354



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           S  RD   D R        + +R  E   + D +++KE  K  D +R+KE   +  R +
Sbjct: 258 SRSRDKRKDTREKVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKERDK 316

---

>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   DRD + D RR+      D DR  +     D DR+++  + +  ERD+ D+ +
Sbjct: 362 DREKDRDKDRDRDRDRRRSHRDRERDKDRERDRDRRRDRDRDRDRDRDHKRERDRGDRGE 421

Query: 495 PPRKR 509
              +R
Sbjct: 422 KREER 426



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   DRD + D  R RD  R   DR  E   D + DR++   +  D +RD++ K +
Sbjct: 358 DRERDREKDRDKDRD--RDRDRRRSHRDR--ERDKDRERDRDRRRDRDRDRDRDRDHKRE 413

Query: 495 PPR 503
             R
Sbjct: 414 RDR 416



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +3

Query: 327 DYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           D   +RD E D  + RD  R       +   D D +R+++  +  D +RD++   +  R 
Sbjct: 356 DRDRERDREKDRDKDRDRDRDRRRSHRDRERDKDRERDRDRRRDRDRDRDRDRDHKRERD 415

Query: 507 RFSR 518
           R  R
Sbjct: 416 RGDR 419



 Score = 33.1 bits (74), Expect = 0.47
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETR-----------MDSDNDREKENSKGYDSERDK 479
           S +RD E + RR+R   R    R  E              D D D++K+  K  D +RD+
Sbjct: 236 SRERDKERERRRSRSRERRRRSRSREKEERKRSRERSRDKDKDKDKDKDKEKDKDKDRDR 295

Query: 480 EDKEQPPRKRFSR 518
           + + +   ++  R
Sbjct: 296 KRRSRSRERKRER 308



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +3

Query: 303 RGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           RGG D  + +S   D    + R RD  R + DR   +R + D +RE+  S+  +  R   
Sbjct: 201 RGGADVNIRHSGRDDTSRYDERDRDRER-ERDRRERSR-ERDKERERRRSRSRERRRRSR 258

Query: 483 DKEQPPRKR 509
            +E+  RKR
Sbjct: 259 SREKEERKR 267



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           D + D   D+D E D+ + RD  R    R  E + + D DREK+  +
Sbjct: 274 DKDKDKDKDKDKEKDKDKDRDRKRRSRSR--ERKRERDRDREKKEDR 318

---

>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRA-RDLYR-GDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           E D   DRD + D RR+ RD  R  D DR  + R D D DRE++  K +  ERD+ D+ +
Sbjct: 364 EKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDRERD--KDHKRERDRGDRSE 421

Query: 495 PPRKR 509
              +R
Sbjct: 422 KREER 426



 Score = 35.4 bits (80), Expect = 0.095
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 321 EMDYSMDRDHE-GDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQP 497
           E D   DRD E G++ R +D  R    R      D + DR+++  +  D +RD+E  +  
Sbjct: 351 ERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDRERDKDH 410

Query: 498 PRKR 509
            R+R
Sbjct: 411 KRER 414



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGY-DSERDKEDKEQPPRKR 509
           ++  E D  R RD  +G+ DR      D D DR+++  + + D +R+K+      R+R
Sbjct: 347 EKSRERDRERDRDREKGEKDR------DKDRDRDRDRRRSHRDRDREKDRDRDRDRRR 398



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
 Frame = +3

Query: 303 RGGFDHEMDYS----MDRDHEGDERRARDLYRGDHDRPMETR----------MDSDNDRE 440
           RGG D  + +S      R  E D  R RD      +R  E R                RE
Sbjct: 204 RGGADVNIRHSGRDDTSRYDERDRERERDRRERSREREKEPRERRRSRSRERRRKSRSRE 263

Query: 441 K-------ENSKGYDSERDKEDKEQPPRKRFSR 518
           K       E SK  D E+DK++K++  RKR SR
Sbjct: 264 KEERKRTREKSKDKDKEKDKDNKDR-DRKRRSR 295

---

>SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (SR-related protein of 86 kDa)
          Length = 494

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E D    ++ + D  + +D +  + D+  E   D D +REK+ SK  D +R KE K +
Sbjct: 289 EREKDKERGKNKDKDREKEKD-HEKERDKEKEKEQDKDKEREKDRSKEADEKRKKEKKSR 347

Query: 495 PPRKRFS 515
            P + ++
Sbjct: 348 TPPRSYN 354



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE-DKEQPPRK 506
           +R+ E ++ R ++      ++  E   + D DREKE  K ++ ERDKE +KEQ   K
Sbjct: 277 EREREKEKEREKE-----REKDKERGKNKDKDREKE--KDHEKERDKEKEKEQDKDK 326



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           S  RD   D R        + +R  E   + + +++KE  K  D +R+KE   +  R +
Sbjct: 258 SRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDK 316

---

>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E +   DRD   +  R RD  R D DR  E   D + DR +   K  D ER++E + +
Sbjct: 283 ERERERDRDRDRTKERDRDRDRER-DRDRDRERSSDRNKDRSRSREKSRDRERERERERE 341

Query: 495 PPRKR 509
             R+R
Sbjct: 342 RERER 346



 Score = 38.1 bits (87), Expect = 0.015
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E D   DR  E D  R R+  R D DR   +  + D  R +E S+  + ER++E + +
Sbjct: 285 ERERDRDRDRTKERDRDRDRERDR-DRDRERSSDRNKDRSRSREKSRDRERERERERERE 343

Query: 495 PPRKR 509
             R+R
Sbjct: 344 RERER 348



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYR---GDHDRPMETRMDSDNDREKENSKGYDSERDKED 485
           D + D + +RD + D  R RD  R    D ++      +   DRE+E  +  + ER++E 
Sbjct: 289 DRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER 348

Query: 486 KEQPPRKR 509
           + +  R+R
Sbjct: 349 ERERERER 356



 Score = 36.6 bits (83), Expect = 0.042
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D        RD E +  R R+  R + +R  E   + + +RE+E  +  D +RD+E+ E+
Sbjct: 321 DRSRSREKSRDRERERERERERER-EREREREREREREREREREREREKDKKRDREEDEE 379

Query: 495 PPRKR 509
              +R
Sbjct: 380 DAYER 384



 Score = 33.5 bits (75), Expect = 0.36
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 342 RDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE-DKEQ 494
           R+ E +  R R+  + + +R  E   D D DR KE  +  D ERD++ D+E+
Sbjct: 264 REREREREREREREK-EKERERERERDRDRDRTKERDRDRDRERDRDRDRER 314



 Score = 33.1 bits (74), Expect = 0.47
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPP 500
           E +   +R+ E  ER        + ++  E   + + DR+++ +K  D +RD+E      
Sbjct: 252 ERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRD 311

Query: 501 RKRFS 515
           R+R S
Sbjct: 312 RERSS 316



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/70 (22%), Positives = 31/70 (44%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E+G  + E         E +  R R+  R + +R  E   + + ++E+E  +  D +RD+
Sbjct: 235 EKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDR 294

Query: 480 EDKEQPPRKR 509
             +    R R
Sbjct: 295 TKERDRDRDR 304

---

>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG)
          Length = 525

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 24/75 (32%), Positives = 31/75 (41%)
 Frame = -1

Query: 348 DLDPWNSPSHDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLL 169
           DL P    SH+Q PH HH   +H HE   +  H    +P   H    +P G   H  H  
Sbjct: 348 DLHPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHH-- 405

Query: 168 QDLVGSHHAQNHGCC 124
                 H  Q++G C
Sbjct: 406 ---PHCHDFQDYGPC 417



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = -1

Query: 360 HLLHDLDPWNSPSHDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHP 181
           H  H   P    +H Q PH HH    HGH  + +  HG   +    H      +GP   P
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHH---PHGHHPHGHHPHGHHPHGHHPHCHDFQDYGPCDPP 420

Query: 180 FH 175
            H
Sbjct: 421 PH 422



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
 Frame = -1

Query: 360 HLLHDLDPWNSPSHDQIPHVH--HICLYHGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSI 187
           H  H+  P     H   PH H  H    HGH  + +  HG        H   P+   P  
Sbjct: 354 HHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHG-----HHPHGHHPHGHHPHC 408

Query: 186 HPFHLLQDLVGSHHAQNHGC 127
           H F          H Q H C
Sbjct: 409 HDFQDYGPCDPPPHNQGHCC 428

---

>GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 464

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           D D E +E  A+D   GD D   +   D ++D EKE   G   E D+E+ E+  R+
Sbjct: 42  DEDEEEEEEEAKD--EGDEDDEEKGEDDEEDDEEKEGEDGEGEEEDEEEDEEKKRE 95

---

>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1072

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 17/78 (21%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDR-----------------DHEGDERRARDLYRGDHDRPMETRMDSD 428
           +R    ++ DYS DR                 D + D RR +D YR D DR    R D D
Sbjct: 35  DRKASRYDDDYSRDRERDRERERDRTRDYRDRDRDYDRRRDKDRYR-DDDRDRRRRDDKD 93

Query: 429 NDREKENSKGYDSERDKE 482
           + R +E  +G D +RD E
Sbjct: 94  DRRREERDRGSDRKRDSE 111

---

>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +3

Query: 312  FDHEMDYSMDRDHEGDERRARDLYRG-DHDRPMETRMDSDNDR---EKENSKGYDSERDK 479
            +D   + S +RD + + RR RD  R  D DR  E   D D DR    K+ SK  +S RD+
Sbjct: 1881 WDRSRERSRNRDRDRERRRDRDRSRSRDRDRDRERARDRDRDRGRDRKDRSKSRESPRDQ 1940

Query: 480  E 482
            +
Sbjct: 1941 K 1941



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 312  FDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDRE----KENSKGYDSERDK 479
            +D   D S +RD E D  RA++      DR  E   + D DRE    ++ S+  D +RD+
Sbjct: 1859 WDKGRDRSSNRDRERDNDRAKEW-----DRSRERSRNRDRDRERRRDRDRSRSRDRDRDR 1913

Query: 480  EDKEQPPRKR 509
            E      R R
Sbjct: 1914 ERARDRDRDR 1923

---

>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK----E 482
           DH+ +   +R+ + ++ R R+    + +R  E   + + +RE+E ++  D ER++    E
Sbjct: 732 DHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWE 791

Query: 483 DKEQ 494
           DK++
Sbjct: 792 DKDK 795



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D+  +R+ E +  R ++  R   +R  E   + + +RE+E  +    ERDKE + Q
Sbjct: 728 DRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERERQ 787



 Score = 37.0 bits (84), Expect = 0.033
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRG---DHDRPMETRMDSDNDREKENSKGYDSERDKED 485
           + E D   +++ E +  RAR+  R    + DR  +   D D +RE+E  +  + ER++E 
Sbjct: 694 ERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER 753

Query: 486 KEQPPRKRFSR 518
           +E+   +   R
Sbjct: 754 EERERERERER 764



 Score = 36.2 bits (82), Expect = 0.055
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRG-DHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQP 497
           E + + +R+ E ++ R R+  R  DHDR  E   + D ++E+E  +  + ER++E + + 
Sbjct: 708 ERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER-EERERERERERER 766

Query: 498 PRKR 509
            R+R
Sbjct: 767 ERER 770



 Score = 35.8 bits (81), Expect = 0.072
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E D   DRD + D  R R+  R         R + + +RE+E  +  + ER++E   +
Sbjct: 720 EKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARE 779

Query: 495 PPRKR 509
             ++R
Sbjct: 780 RDKER 784



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 336 MDRDHEGDERRAR--DLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           ++RD   +ERR    D  R +  R  +   + D +RE+E  +  D ER+KE + +  R R
Sbjct: 654 LERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERAR 713



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E +   +RD + D  R R+  R + DR  E   + + +RE+E  +  + ER++E + +
Sbjct: 718 EREKERDRERDRDRDHDRERERER-ERDREKERERERE-ERERERERERERERERERERE 775

Query: 495 PPRKR 509
             R+R
Sbjct: 776 RARER 780



 Score = 32.3 bits (72), Expect = 0.80
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 345 DHEGDER-RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           D   DER R RD  R + DR  E   + + DRE+E  +  + ER +E + +  ++R
Sbjct: 669 DDRRDERARERDRER-ERDRERERERERERDREREKERELERERAREREREREKER 723



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D   D   +R  E D  R RD  R + +R  E   + + +RE E  +  + ER++E +  
Sbjct: 666 DRVDDRRDERARERDRERERDRER-ERERERERDREREKERELERERAREREREREKERD 724

Query: 495 PPRKR 509
             R R
Sbjct: 725 RERDR 729



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 339  DRDHEGDERRARD---LYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            DRD + D  R RD   L   + +R  + R D D +RE+  S   + +RD++
Sbjct: 1324 DRDADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRD 1374

---

>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV Y  H  AQ+A+ EM+GK++  R V V
Sbjct: 233 FGFVNYGNHEEAQKAVTEMNGKEVNGRMVYV 263

---

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           ERG  +   +++ +R+ E +  R RD  R D DR  +   D D DR++++  G   ++ +
Sbjct: 221 ERGANNQCSNHNYERERERERDRDRDRER-DRDRDRDRDRDRDRDRDRDSRPGNTRQQRR 279

Query: 480 EDKEQPPRKRFSR 518
            D       R+ R
Sbjct: 280 SDYRDDREDRYER 292



 Score = 35.0 bits (79), Expect = 0.12
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYD-SERDKEDKE 491
           D + D   DRD + D  R RD  R    RP  TR    +D   +    Y+ S+R +  K+
Sbjct: 242 DRDRDRERDRDRDRDRDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDRYERSDRRRPQKQ 301

Query: 492 Q 494
           Q
Sbjct: 302 Q 302

---

>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFV +    AA  AI EMDGK++  R +RVN
Sbjct: 78  FGFVNFNDEGAATAAISEMDGKELNGRHIRVN 109

---

>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV Y  H  AQ+A+ EM+GK++  R + V
Sbjct: 233 FGFVNYGNHEEAQKAVSEMNGKEVNGRMIYV 263

---

>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV Y  H  AQ+A+ EM+GK++  R + V
Sbjct: 233 FGFVNYGNHEEAQKAVSEMNGKEVNGRMIYV 263



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           YGFV +  H AA RAI  M+G  + +R V V
Sbjct: 140 YGFVHFETHEAANRAIQTMNGMLLNDRKVFV 170

---

>ACCD_OENHO (Q9MTL3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           beta (EC 6.4.1.2) (ACCase beta chain)
          Length = 438

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 18/65 (27%), Positives = 38/65 (58%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   + D EGD +  ++   GD ++P +  ++ DN   KE+ +G D ++++E+K++
Sbjct: 40  DEEYDDEYEEDLEGDNKPHKEDLEGD-NKPHKEDLEGDNKPHKEDLEG-DKQKEEEEKQK 97

Query: 495 PPRKR 509
              ++
Sbjct: 98  EEEEK 102

---

>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   +A + AI EM+GK++  R + VNE
Sbjct: 49  FGFVTFKDEKAMRDAIEEMNGKELDGRVITVNE 81

---

>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV Y  H AAQ+A+L++ GK I  + + V
Sbjct: 239 KGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYV 271

---

>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 504

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 339 DRDHEGDE--RRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           DRD E D   RR RD  R DHDR    R  +  DRE+   +    ER +E + +  R+R 
Sbjct: 441 DRDRERDRSPRRDRDRERDDHDR--RDRDRNGRDRERNGDRERYRERSRERENERYRERD 498

Query: 513 SR 518
            R
Sbjct: 499 DR 500



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 342 RDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           RD E   +R RD      +R  +     D DRE++ S   D +R+++D ++  R R  R
Sbjct: 418 RDRERSPKRERD-----RERERDRSPRRDRDRERDRSPRRDRDRERDDHDRRDRDRNGR 471



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E     +RD E +  R+    R D DR  +     D DRE+++    D +R+  D+E+
Sbjct: 419 DRERSPKRERDRERERDRSP---RRDRDRERDRSPRRDRDRERDDHDRRDRDRNGRDRER 475



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 426 DNDREKENSKGYDSERDKEDKEQPP 500
           D DR+++   G+ S RD  D  +PP
Sbjct: 359 DGDRDRDRDSGWSSRRDAPDSRRPP 383

---

>BFR2_CRYNE (Q5KBS9) Protein BFR2|
          Length = 463

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = +3

Query: 312 FDHEMDYSMDRD----HEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           FD + D   DR+     EG +    +   GD D   E   D D +   E+ +G D + D+
Sbjct: 82  FDDDDDDDDDREGNGSEEGSDGEGDEDEDGDEDDEDEEDEDEDEEESDEDEQGEDEDEDE 141

Query: 480 EDKEQP 497
           E++ QP
Sbjct: 142 EEQPQP 147

---

>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein
           F41)
          Length = 486

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           KC+GFV+Y    +AQ AI  M+G QIG + ++V
Sbjct: 442 KCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 474

---

>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)|
           (RNA-binding protein BRUNOL-2) (Deadenylation factor
           CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding
           protein) (EDEN-BP)
          Length = 486

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           KC+GFV+Y    +AQ AI  M+G QIG + ++V
Sbjct: 442 KCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 474

---

>INO80_YEAST (P53115) Putative DNA helicase INO80 (EC 3.6.1.-)|
           (Inositol-requiering protein 80)
          Length = 1489

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D D++ D     D    D+D   E   DSDND E+EN +  + E + ED ++
Sbjct: 224 DEDNDNDNENNND---NDNDNENENDNDSDNDDEEENGEEDEEEEEIEDLDE 272

---

>BFR2_EMENI (Q5AW04) Protein bfr2|
          Length = 576

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 14/65 (21%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHD-RPMETR-------------MDSDNDREKENSKGYDSERD 476
           D D +GDE    D+  G  D RP +++             MDSD+  E E+ +G+D    
Sbjct: 105 DEDEDGDEDEDEDISEGSEDERPSKSKAHSLKGREDADVGMDSDDSEEDEDGEGFDDGFS 164

Query: 477 KEDKE 491
            ED++
Sbjct: 165 DEDED 169

---

>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1341

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = +3

Query: 327  DYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
            ++S +RD E +  R RD  RGD DR          DRE++  +G   ERD+ D ++  R 
Sbjct: 1282 EHSRERDRERERERERD--RGDRDR----------DRERDRERG--RERDRRDTKRHSRS 1327

Query: 507  R 509
            R
Sbjct: 1328 R 1328



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +3

Query: 339  DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
            +R  E ++RR         +R  E   + +   E+E  + +  ERD+E + +  R R  R
Sbjct: 1243 ERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDR 1302

---

>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 35.4 bits (80), Expect = 0.095
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +3

Query: 303 RGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           R   +   +    RD E  ER  R+      +R  E   + + +REKE  K  + ER+K+
Sbjct: 551 RAASEEASEVKARRDEEERERERRE-----REREREKEKEKEREREKEKEKEKEREREKQ 605

Query: 483 DKEQPPRKRFSR 518
            +++  ++R S+
Sbjct: 606 KQKESEKERESK 617

---

>SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1083

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E   F  E D   +R  +G+E    +  R       E   + + + E+E    YD E ++
Sbjct: 5   EDSNFSEEED--SERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEE--YDEEEEE 60

Query: 480 EDKEQPPRK 506
           ED ++PP+K
Sbjct: 61  EDDDRPPKK 69

---

>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)|
          Length = 279

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 FDHEMDYSMDRDHEGDERRARDLYRGDHDRPMET-RMDSDNDREKENSKGYDSERD-KED 485
           FD   D   D D E D+    D    D+D   +    D D+D+E +N +  D ERD K+D
Sbjct: 156 FDDNDDDKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDD 215

Query: 486 KEQ 494
            E+
Sbjct: 216 DEE 218



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK------GY 461
           + G  D++ D+  D D + D++   +    D +R  +   + D+D +KEN K      G 
Sbjct: 177 DHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDDEEDDDNDKENDKDDGEGSGD 236

Query: 462 DSERDKEDKEQ 494
           D + D ED ++
Sbjct: 237 DDDNDDEDDDK 247

---

>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase (EC 3.6.1.-)
          Length = 1168

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREK---ENSKGYDSERDK 479
           G D + D + DRD   D  R R+  RGD +   E R      RE+   +  +G D  RD+
Sbjct: 137 GRDRDRDRNRDRDDRRDRHRDRERNRGDEEG--EDRRSDRRHRERGRGDGGEGEDRRRDR 194

Query: 480 EDKEQ 494
             K++
Sbjct: 195 RAKDE 199



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           +R  E D  R RD      DR  +   D D+ R++      D ER++ D+E   R+
Sbjct: 120 ERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHR----DRERNRGDEEGEDRR 171

---

>SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5) (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit) (DSIF p160) (Tat-cotransactivator 1 protein)
           (Tat-CT1 protein)
          Length = 1087

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E   F  E D   +R  +G+E    +  R       E   + +++ E+E  + YD E ++
Sbjct: 5   EDSNFSEEED--SERSSDGEEAEVDEERRSAAGSEKEE--EPEDEEEEEEEEEYDEEEEE 60

Query: 480 EDKEQPPRK 506
           ED ++PP+K
Sbjct: 61  EDDDRPPKK 69

---

>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-2)
          Length = 1558

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDER-RARDLYRGDHDRPMET-----------RMDSDNDREKENSKG 458
           D E D   DRD E D+R +AR+    ++ RP  +             D   D + +N+  
Sbjct: 10  DKEKDRDRDRDRERDKRDKARE---SENARPRRSCTLEGGAKNYAESDHSEDEDNDNNSA 66

Query: 459 YDSERDKEDKEQPPRKR 509
              E +K+ +++PP+K+
Sbjct: 67  TTEESNKKSRKKPPKKK 83



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 405 METRMDSDNDREKENSKGYDSERDKEDK 488
           M    D D D+EK+  +  D ERDK DK
Sbjct: 1   MTADKDKDKDKEKDRDRDRDRERDKRDK 28



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
 Frame = -1

Query: 282  HGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLLQDLVGSHHAQN----------- 136
            H HE+ R+P  GT  YP D   + P P   +    H LQ +    HAQ+           
Sbjct: 1477 HEHEMLRHPVFGTP-YPRDLPGAIPPPMSAA----HQLQAM----HAQSAELQRLAMEQQ 1527

Query: 135  --HGCCLLYALHLLSQHDY 85
              HG   ++  HL SQ DY
Sbjct: 1528 WLHGHPHMHGGHLPSQEDY 1546

---

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           K +GFVTY   +  Q AI  +DG  +  R +RV+E
Sbjct: 245 KGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSE 279

---

>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 588

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENS-KGYDSERDKEDKE 491
           D + +   DRD E +  R R+  R     P     D +  R +E + +GY+  R   +KE
Sbjct: 460 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 519

Query: 492 QPPRKRFSR 518
           +  R+R  R
Sbjct: 520 ERHRERRHR 528



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERD 476
           + DY   R+ + D  R RD  R           D D DRE+E ++  + ERD
Sbjct: 444 QWDYYARREKDRDRERDRDRER-----------DRDRDRERERTRERERERD 484

---

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   ++ + AI EM+GK++  R + VNE
Sbjct: 49  FGFVTFKDEKSMKDAIDEMNGKELDGRTITVNE 81

---

>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 536

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENS-KGYDSERDKEDKE 491
           D + +   DRD E +  R R+  R     P     D +  R +E + +GY+  R   +KE
Sbjct: 408 DRDRERERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 467

Query: 492 QPPRKRFSR 518
           +  R+R  R
Sbjct: 468 ERHRERRHR 476

---

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 24/112 (21%), Positives = 39/112 (34%)
 Frame = -1

Query: 468 HYHSLLNFPSPCHYRNPYASPXXXXXXXXXXX*RASHLLHDLDPWNSPSHDQIPHVHHIC 289
           H+H   + P P H+ + +                A+H  H         H++  H HH  
Sbjct: 93  HHH---HHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHH---------HEEHHHHHHAA 140

Query: 288 LYHGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLLQDLVGSHHAQNH 133
            +H HE + +  H    +P   H+   Y    + H  H        HH  +H
Sbjct: 141 HHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHH 192

---

>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 581

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENS-KGYDSERDKEDKE 491
           D + +   DRD E +  R R+  R     P     D +  R +E + +GY+  R   +KE
Sbjct: 453 DRDRERERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 512

Query: 492 QPPRKRFSR 518
           +  R+R  R
Sbjct: 513 ERHRERRHR 521

---

>PLS_STAAU (P80544) Surface protein precursor (Plasmin-sensitive surface|
            protein) (230 kDa cell-wall protein)
          Length = 1637

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYR---GDHDRPMETRMDSDNDREKENSKGYDSERDKED 485
            D + D   D D +GD     D       D D   ++  DSD D + ++    D++RD  D
Sbjct: 1529 DSDSDADSDSDADGDSDADSDSDADSDSDSDSDSDSDSDSDADSDSDSDSDSDADRDHND 1588

Query: 486  KEQPPRKR 509
            K   P  +
Sbjct: 1589 KTDKPNNK 1596



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1421 DSDSDSDADSDSDSDSDSDAD---SDSDADSDSDADSDSDADSDSDSDSDSDADSD 1473



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1391 DSDSDSDADSDSDSDSDSDAD---SDSDADSDSDSDSDSDADSDSDSDSDSDADSD 1443



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1361 DSDADSDSDADSDSDSDADSD---SDSDADSDSDSDSDSDADSDSDSDSDSDADSD 1413



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1333 DSDSDSDSDSDSDADSDSDSD---SDSDADSDSDADSDSDADSDSDSDADSDSDSD 1385



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1483 DSDSDADSDSDSDSDSDADSD---SDSDSDSDSDADSDSDADSDSDSDADSDSDAD 1535



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1451 DADSDSDADSDSDSDSDSDAD---SDSDADSDSDADSDSDADSDSDSDSDSDADSD 1503



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1309 DADSDSDADSDSDADSDSDAD---SDSDSDSDSDSDSDSDADSDSDSDSDSDADSD 1361

---

>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV+Y +H  A +A+ EM+GK+I  + + V
Sbjct: 231 KGFGFVSYEKHEDANKAVEEMNGKEISGKIIFV 263

---

>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENS-KGYDSERDKEDKE 491
           D + +   DRD E +  R R+  R     P     D +  R +E + +GY+  R   +KE
Sbjct: 466 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 525

Query: 492 QPPRKRFSR 518
           +  R+R  R
Sbjct: 526 ERHRERRHR 534



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERD 476
           + DY   R+ + D  R RD  R           D D DRE+E ++  + ERD
Sbjct: 450 QWDYYARREKDRDRERDRDRER-----------DRDRDRERERTRERERERD 490

---

>AN32B_SHEEP (Q6A1I3) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (Leucine-rich acidic nuclear protein) (LAN)
           (Acidic protein rich in leucines)
          Length = 261

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +3

Query: 300 ERGGFDHEMD------YSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGY 461
           E  G D E D         + D +G+E    D    D D  +E   D D    +E   G+
Sbjct: 161 EVDGVDEEEDDEEGENEDKEEDEDGEEEEFDDEEDDDEDEDVEGEEDEDKVSGEEEEFGH 220

Query: 462 DSERDKEDKEQ 494
           D E D++D+++
Sbjct: 221 DGEADEDDEDE 231



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRG-----------DHDRPMETRMDSDNDREKE 446
           E   FD E D   D D EG+E    D   G           D D   E   + +++ E+E
Sbjct: 186 EEEEFDDEEDDDEDEDVEGEEDE--DKVSGEEEEFGHDGEADEDDEDEDEDEDEDEEEEE 243

Query: 447 NSKGYDSERDKEDK 488
           + KG   +R+ +D+
Sbjct: 244 SGKGEGRKRETDDE 257

---

>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK++  + + V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           K YGFV +  H AA+RAI +M+G  +  R V V +
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ 172

---

>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK++  + + V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170

---

>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK++  + + V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170

---

>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK++  + + V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170

---

>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK++  + + V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV 170

---

>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)|
          Length = 452

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 339 DRDHEGDERRARD--LYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           DRD + D RR+RD      D DR  + +     DR++ +    + +RD++      R+R 
Sbjct: 296 DRDRDRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRR 355

Query: 513 SR 518
           S+
Sbjct: 356 SK 357

---

>CLFB_STAAN (Q7A382) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 877

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 751 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 807

Query: 495 PP 500
           PP
Sbjct: 808 PP 809



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DSE D + +
Sbjct: 617 DSDSDSESDSDSESDSDSDSD---SDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSE 671



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 659 DSDSDSESDSDSESDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 713



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +   +
Sbjct: 607 DSDSDSDSDSDSDSDSESDSDS-ESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSE 665



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     +    D D   ++  DSD+D E ++    DSE D +
Sbjct: 627 DSESDSDSDSDSDSDSDSDSE---SDSDSDSDSDSDSDSDSESDSDSESDSESDSD 679



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 685 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 737



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYR-GDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           D + D   D D E D     D     D D   ++  DSD+D + ++    DS+ D +   
Sbjct: 653 DSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 712

Query: 492 Q 494
           +
Sbjct: 713 E 713



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 701 DSDSDSDSDSDSESDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 755



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 727 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779

---

>CLFB_STAAM (Q99R07) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 877

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 751 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 807

Query: 495 PP 500
           PP
Sbjct: 808 PP 809



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DSE D + +
Sbjct: 617 DSDSDSESDSDSESDSDSDSD---SDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSE 671



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 659 DSDSDSESDSDSESDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 713



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +   +
Sbjct: 607 DSDSDSDSDSDSDSDSESDSDS-ESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSE 665



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     +    D D   ++  DSD+D E ++    DSE D +
Sbjct: 627 DSESDSDSDSDSDSDSDSDSE---SDSDSDSDSDSDSDSDSESDSDSESDSESDSD 679



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 685 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 737



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYR-GDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           D + D   D D E D     D     D D   ++  DSD+D + ++    DS+ D +   
Sbjct: 653 DSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 712

Query: 492 Q 494
           +
Sbjct: 713 E 713



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 701 DSDSDSDSDSDSESDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 755



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 727 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 779

---

>CLFB_STAAU (O86476) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 913

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 787 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 843

Query: 495 PP 500
           PP
Sbjct: 844 PP 845



 Score = 32.3 bits (72), Expect = 0.80
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     D    D D   ++  DSD+D E ++    DSE D +
Sbjct: 627 DSESDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSESDSD 679



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DSE D + +
Sbjct: 617 DSDSDSESDSDSESDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSE 671



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 607 DSDSDSDSDSDSDSDSESDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 665



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 643 DSDSDSDSDSDSDSDSDSDSDS-ESDSDSESDSESDSDSDSDSDSDSDSDSDSDSD 697



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 763 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 815



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 739 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 791



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 715 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 767



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 691 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 743

---

>CLFB_STAAC (Q5HCR7) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 913

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 787 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 843

Query: 495 PP 500
           PP
Sbjct: 844 PP 845



 Score = 32.3 bits (72), Expect = 0.80
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     D    D D   ++  DSD+D E ++    DSE D +
Sbjct: 627 DSESDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSESDSD 679



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D E D     D    D D   ++  DSD+D + ++    DSE D + +
Sbjct: 617 DSDSDSESDSDSESDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSE 671



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 607 DSDSDSDSDSDSDSDSESDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 665



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 643 DSDSDSDSDSDSDSDSDSDSDS-ESDSDSESDSESDSDSDSDSDSDSDSDSDSDSD 697



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 763 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 815



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 739 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 791



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 715 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 767



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 691 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 743

---

>TOP1_RAT (Q9WUL0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +3

Query: 357 DERRARDLYRGDHDRPMETRMDSDNDREK---ENSKGYDSERDKEDKEQPPRK 506
           D  + +D ++    R  E + D D DREK    NS+  DSE+  ++KE+   K
Sbjct: 20  DSHKHKDKHKDREHRHKEHKKDKDKDREKSKHSNSEHKDSEKKHKEKEKTKHK 72

---

>TOP1_MOUSE (Q04750) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 767

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +3

Query: 357 DERRARDLYRGDHDRPMETRMDSDNDREK---ENSKGYDSERDKEDKEQPPRK 506
           D  + +D ++    R  E + D D DREK    NS+  DSE+  ++KE+   K
Sbjct: 20  DSHKHKDKHKDREHRHKEHKKDKDKDREKSKHSNSEHKDSEKKHKEKEKTKHK 72

---

>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +3

Query: 366 RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           + R+ YR + +R  E   D D +RE+E  +  + ERD+E +E+  R  +
Sbjct: 336 KERERYR-ERERDRERDRDRDRERERERDRERERERDREREEEKKRHSY 383



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           D++ E    R RD  R D DR  E   + D +RE+E  +  + E+ +    + P+
Sbjct: 335 DKERERYRERERDRER-DRDRDRERERERDRERERERDREREEEKKRHSYFEKPK 388

---

>PQBP1_HUMAN (O60828) Polyglutamine-binding protein 1 (Polyglutamine|
           tract-binding protein 1) (PQBP-1) (38 kDa nuclear
           protein containing a WW domain) (Npw38)
          Length = 265

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPP 500
           ++D   D+   G ++  RD  RG +D+    R   + DRE++  +GYD    +E KE+  
Sbjct: 123 KLDRGHDKSDRGHDKSDRDRERG-YDKVDRER---ERDRERDRDRGYDKADREEGKERRH 178

Query: 501 RKR 509
            +R
Sbjct: 179 HRR 181

---

>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25|
          Length = 444

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDS-DNDREKENSKGYDSERDKED--- 485
           H  D   DRD + D   ARD  R  H R    R DS D  R +   +  DSE D+     
Sbjct: 196 HRSDRHRDRDDDRDRDSARDRDRDRHSR--RRRSDSRDRSRSRSPRRRSDSEEDRSKQRR 253

Query: 486 KEQPPRKR 509
           ++ P R R
Sbjct: 254 RDSPDRTR 261

---

>SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1082

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E   F  E D   +R  E +E    +    D      +  + + + E+E  + YD E ++
Sbjct: 5   EDSNFSEEED--SERSSEAEEAEVEE----DQRSAAGSEKEEEPEEEEEEEEEYDEEEEE 58

Query: 480 EDKEQPPRK 506
           ED ++PP+K
Sbjct: 59  EDDDRPPKK 67

---

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +C+GFV +      +RA++EM GK    RA+RV
Sbjct: 234 RCFGFVRFGDEDERRRALIEMSGKWFQGRALRV 266

---

>PLS_STAAC (Q5HJU7) Putative surface protein SACOL0050 precursor|
          Length = 1548

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            D + D   D D + D     D    D D   ++  DSD D + +     D++RD  DK  
Sbjct: 1446 DSDSDADSDSDADSDSDADSD---SDSDSDSDSDSDSDADSDSDADSDSDADRDHNDKTD 1502

Query: 495  PPRKR 509
             P  +
Sbjct: 1503 KPNNK 1507



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+RD +
Sbjct: 1336 DSDSDSDSDADSDSDADSDSD---ADSDSDADSDSDSDSDSDSDSDSDSDSDRDSD 1388



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/63 (25%), Positives = 26/63 (41%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +    
Sbjct: 1326 DSDSDSDSDADSDSDSDSDAD---SDSDADSDSDADSDSDADSDSDSDSDSDSDSDSDSD 1382

Query: 495  PPR 503
              R
Sbjct: 1383 SDR 1385



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D  R D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1362 DADSDSDSDSDSDSDSDSDSDSDR-DSDADSDSDADSDSDSDSDSDADSDSDSDSD 1416



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1358 DSDSDADSDSDSDSDSDSDSD---SDSDSDRDSDADSDSDADSDSDSDSDSDADSD 1410



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D ++++    DS+ D +
Sbjct: 1346 DSDSDADSDSDADSDSDADSD---SDSDSDSDSDSDSDSDSDRDSDADSDSDADSD 1398



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1242 DSDSDSDADSDSDADSDSDAD---SDSDADSDSDSDSDSDADSDSDSDSDSDADSD 1294



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1420 DSDSDADSDSDSDADSDSDSD---SDSDADSDSDADSDSDADSDSDADSDSDSDSD 1472



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1388 DADSDSDADSDSDSDSDSDAD---SDSDSDSDSDADSDSDADSDSDSDADSDSDSD 1440



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1290 DADSDSDADSDSDADSDSDAD---SDSDSDSDSDADSDSDSDSDSDSDADSDSDSD 1342



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1218 DSDSDSDSDSDSDADSDSDAD---SDSDSDSDSDADSDSDADSDSDADSDSDADSD 1270



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 1200 DADSDSDADSDSDADSDSDSD---SDSDSDSDSDADSDSDADSDSDSDSDSDADSD 1252

---

>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 3   GKCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           GKC GFV Y    +A+ AI  M G  I N  VR++
Sbjct: 347 GKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLS 381



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +T     Q A+ EM G  +  RA++V
Sbjct: 205 KGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV 237

---

>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)|
           (Zona occludens 2 protein) (Tight junction protein 2)
          Length = 1190

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           G  HE   S +RD   D  R R L RG         +D D+ R ++ S+G   ER  +  
Sbjct: 178 GRPHERARSRERDLSRDRSRGRSLERG---------LDQDHARTRDRSRGRSLERGLDHD 228

Query: 489 EQPPRKR 509
             P R R
Sbjct: 229 FGPSRDR 235

---

>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)|
          Length = 1157

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPP 500
           +MD  + R+ E +  R R+      +   E   + + +REKE  +  + ER+KE + +  
Sbjct: 272 QMDEELRRERERERERERE-----READREREKEREREREKEREQEKEREREKERERELE 326

Query: 501 RKRFSR 518
           R+R  R
Sbjct: 327 RQREQR 332

---

>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
 Frame = +3

Query: 318 HEMDYSMDRDHEG--DERR---ARDLYRGDHDRPMETRMDSDNDREK------ENSKGYD 464
           H+ +   D+D E   DER    ++     D ++  E + +SD D ++      E  +GYD
Sbjct: 374 HKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYD 433

Query: 465 SERDKEDKEQP 497
           SE++K+++++P
Sbjct: 434 SEKEKKEEKKP 444

---

>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV++ +H  AQ+A+ +M+GK +  +A+ V
Sbjct: 233 FGFVSFERHEDAQKAVDDMNGKDLNGKAIFV 263



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIDKMNGMLLNDRKVFV 170

---

>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 907

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           G D + D   D D + D     D    D D   ++  DSD+D E ++    DSE D +
Sbjct: 593 GSDSDSDSDSDSDSDSDSGSDSDS-DSDSDSESDSESDSDSDSESDSDSDSDSESDSD 649



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    + D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 781 DSDSDSDSDSDSDSDSDSDSD---SESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 837

Query: 495 PP 500
           PP
Sbjct: 838 PP 839



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D E ++    DS+ D +
Sbjct: 605 DSDSDSGSDSDSDSDSDSESDS-ESDSDSDSESDSDSDSDSESDSDSDSDSDSDSD 659



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D E D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 755 DSDSDSDSDSDSESDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSD 807



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D E ++    DS+ D +
Sbjct: 655 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSESDSDSDSDSDSDSD 707



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D E
Sbjct: 677 DSDSDSESDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 729



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 727 DSESDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSD 781



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 671 DSDSDSDSDSDSESDSDSDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 729



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 713 DSDSDSDSDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 767



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 701 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 753



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 629 DSDSDSESDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 683



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 749 DSDSDSDSDSDSDSDSDSESD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 803



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 711 DSDSDSDSDSDSDSDSDSESD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 767



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 745 DSDSDSDSDSDSDSDSDSDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 803



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D E D          D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 633 DSESDSDSDSDSESDS---------DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 683



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 639 DSDSDSESDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSE 693

---

>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 905

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           G D + D   D D + D     D    D D   ++  DSD+D E ++    DSE D +
Sbjct: 593 GSDSDSDSDSDSDSDSDSGSDSDS-DSDSDSESDSESDSDSDSESDSDSDSDSESDSD 649



 Score = 32.7 bits (73), Expect = 0.61
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    + D   ++  DSD+D + ++    DS+ D + +  
Sbjct: 779 DSDSDSDSDSDSDSDSDSDSD---SESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVT 835

Query: 495 PP 500
           PP
Sbjct: 836 PP 837



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D E ++    DS+ D +
Sbjct: 605 DSDSDSGSDSDSDSDSDSESDS-ESDSDSDSESDSDSDSDSESDSDSDSDSDSDSD 659



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     D    D D   ++  DSD+D + E+    DS+ D +
Sbjct: 727 DSESDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSESDSDSDSDSDSD 779



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D E ++    DS+ D +
Sbjct: 655 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSESDSDSDSDSDSDSD 707



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D E
Sbjct: 677 DSDSDSESDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 729



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D E D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 671 DSDSDSDSDSDSESDSDSDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 729



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 751 DSDSDSDSDSDSDSDSESDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSD 805



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 713 DSDSDSDSDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 767



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 701 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 753



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 629 DSDSDSESDSDSDSDSESDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 683



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 711 DSDSDSDSDSDSDSDSDSESD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 767



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 745 DSDSDSDSDSDSDSDSDSDSDS-ESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 801



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D E D          D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 633 DSESDSDSDSDSESDS---------DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 683



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 639 DSDSDSESDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSE 693

---

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDR------PMETRMDSDNDREKENSKGY 461
           ++GG D + D   DRD      R RD  RGD DR         T  D D DR ++  + Y
Sbjct: 304 DQGGRDRDRDSRRDRD------RTRD--RGDRDRRDRDRGRDRTSRDHDRDRSRKKERDY 355

Query: 462 DS------------ERDKEDKEQPPRKR 509
           +             ERD E + +P   R
Sbjct: 356 EGGEYEHEGGGRSRERDAEYRGEPEETR 383



 Score = 33.1 bits (74), Expect = 0.47
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPP 500
           E + S +  HE    R+RD  R   D+    R     DR++++ +  D  RD+ D+++  
Sbjct: 274 ERERSRELSHEQPRERSRD--RPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRD 331

Query: 501 RKR 509
           R R
Sbjct: 332 RDR 334



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           S DR  E    R RD    D DR      DS  DR++   +G   +RD+ D+++  R R 
Sbjct: 290 SRDRPREDKHHRDRDQGGRDRDR------DSRRDRDRTRDRG---DRDRRDRDR-GRDRT 339

Query: 513 SR 518
           SR
Sbjct: 340 SR 341

---

>MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (MyT1L protein)|
           (Neural zinc finger factor 1) (NZF-1)
          Length = 1187

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + ++S D D +GD+    ++ R D +   E   D ++D + ++    + E D +D+E+
Sbjct: 105 DDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEE--DDEDDEDDDDGDDVEEEEDDDDEEE 162

---

>MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein (MyT1L protein)|
           (Postmitotic neural gene 1 protein) (Zinc finger protein
           Png-1) (Neural zinc finger factor 1) (NZF-1)
          Length = 1187

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 15/60 (25%), Positives = 33/60 (55%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + ++S D D +GD+    ++ R D +  +E   D D+D +++     + E D +++E+
Sbjct: 105 DDDEEFSEDNDEQGDDDDEDEVDREDEEE-IEEEDDEDDDDDEDGDDVEEEEEDDDEEEE 163

---

>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK-----EDKEQPP 500
           DRD + D  R R  YR D   P + R     +RE+  S   D  RD+      D  +PP
Sbjct: 43  DRDRDRDRERDRGGYRQD---PRDRRYSRSRERERRGSGSRDRSRDRSRDRSRDAHRPP 98



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 342 RDHEGDER-RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           RD   DER R RD+   D DR  +   D    R+    + Y   R++E +    R R
Sbjct: 26  RDRSRDERDRFRDVRDRDRDRDRDRERDRGGYRQDPRDRRYSRSRERERRGSGSRDR 82

---

>CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 873

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D E D          D D   ++  +SD+D E ++    DS+ D + +  
Sbjct: 749 DSESDSDSDPDSESDSDSD-----SDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSRVT 803

Query: 495 PP 500
           PP
Sbjct: 804 PP 805



 Score = 32.3 bits (72), Expect = 0.80
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D + D     D    D D   ++  DSD+D E ++    DS+ + +    
Sbjct: 701 DSESDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSESDSDSDSESDSDSD 757

Query: 495 P 497
           P
Sbjct: 758 P 758



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DSE D +
Sbjct: 713 DSDSDSDSDSDSDSDSDSDSD---SDSDSESDSESDSDSDSESDSDSDPDSESDSD 765



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D     D    D D   E+  DSD D E ++    DS+ D +   +
Sbjct: 721 DSDSDSDSDSDSDSDSDSESDS-ESDSDSDSESDSDSDPDSESDSDSDSDSDSDSDSDSE 779



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D E D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 621 DSESDSDSDSDSDSDSDSDSDS-DSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSD 675



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D + D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 673 DSDSDSNSDSDSDSDSDSDSDS-DSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 727



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 647 DSDSDSESDSDSDSDSDSDSDS-DSDSDSDSDSNSDSDSDSDSDSDSDSDSDSDSDSE 703

---

>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV++ +H  AQ+A+ EM+GK +  +++ V
Sbjct: 231 KGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFV 263



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K YGFV +    AA+RAI +M+G  + +R V V
Sbjct: 138 KGYGFVHFETQEAAERAIDKMNGMLLNDRKVFV 170

---

>HANG_DROME (Q9VXG1) Zinc finger protein hangover|
          Length = 1959

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            D E    +D D  GD+  +     GD D   ++  D D + E E+ +G   E + E+  Q
Sbjct: 1640 DEEDSDDLDEDSSGDDDDSSGT--GDDDDDDDSDDDEDGEGEDEDEEGDGGEGEDEEGVQ 1697

Query: 495  PP 500
            PP
Sbjct: 1698 PP 1699

---

>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT++   A + AI  M+GK++  R + VNE
Sbjct: 30  FGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62

---

>SNWA_DICDI (P54705) Protein snwA|
          Length = 685

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           S D     D RR  D    D DR  + R DSD+D + ++S   D    +E KE+  R +
Sbjct: 466 SRDNRDNRDNRRRDD--SNDRDRYSKRRSDSDSDSDSDSSDSEDERVRRERKEKLERDK 522

---

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = +3

Query: 333  SMDRDHEGDERRARDLYRGDHDRP------------METRMDSDNDREKENSKGYDSERD 476
            + D DH G     RD Y  D DR              + + D +  R+++  +  D ERD
Sbjct: 916  TFDADHAGQ----RDRYDRDRDREPYFDRPSNITDHRDFKRDRETHRDRDRDRVLDYERD 971

Query: 477  KEDKEQPPR 503
            + D+E+ PR
Sbjct: 972  RFDRERRPR 980

---

>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1338

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRG---DHDRPMET-----RMDSDNDREKENSKGYDSE 470
            + E +   +R+ E +  R R L R    +H R  E      R   D +RE+E  +    E
Sbjct: 1253 EREEEEQKEREKEAERERNRQLEREKRREHSRERERDRERERDRGDRERERERDRDRGRE 1312

Query: 471  RDKEDKEQPPRKR 509
            RD+ D ++  R R
Sbjct: 1313 RDRRDTKRHSRSR 1325

---

>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2|
          Length = 876

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYR---GDHDRPMET----RMDSDNDREKENSKGYDSERDKEDKEQP 497
           D D E D RR RD +R    D+DR  E     R D  NDRE +  +   S  +  D ++ 
Sbjct: 3   DSDDEYDRRR-RDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRN 61

Query: 498 PRKRFS 515
            R+RFS
Sbjct: 62  RRERFS 67

---

>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 366 RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFS 515
           + R+ YR   +R  +   D D +R++E  +  + ERD+E + +  +KR S
Sbjct: 336 KERERYR---ERERDRERDRDRERDRERDRERERERDREREREEEKKRHS 382



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           D++ E    R RD  R D DR  +   D + +RE++  +  + E+ +    + P+
Sbjct: 335 DKERERYRERERDRER-DRDRERDRERDRERERERDREREREEEKKRHSYFEKPK 388



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 396 DRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           D+  E   + + DRE++  +  D ERD+E + +  R+R
Sbjct: 335 DKERERYRERERDRERDRDRERDRERDRERERERDRER 372

---

>WDR43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)|
          Length = 665

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFS 515
           + D E  E+ + D +  D D+  E     D D E+E+    D E ++ED+E    K  +
Sbjct: 593 ESDDEVPEKDSDDNWDEDEDKDSEKDEGVDEDNEEEDEDMEDKEENEEDREVSSEKELN 651



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK--GYDSERDKEDK 488
           D   D   D+D E DE    D    D D  ME + +++ DRE  + K    DS+ D E++
Sbjct: 604 DDNWDEDEDKDSEKDEGVDEDNEEEDED--MEDKEENEEDREVSSEKELNGDSDLDPENE 661

Query: 489 EQ 494
            +
Sbjct: 662 SE 663

---

>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-1-related protein)
          Length = 1559

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDER-RARDLYRGDHDRP---------METRMDSDNDREKENSKGYD 464
           D E D   DRD E D+R +AR+    ++ RP          +   +SD+  +++N  G  
Sbjct: 10  DKEKDRDRDRDRERDKRDKARE---SENARPRRSCTLEGGAKNYAESDHSEDEDNDNGAT 66

Query: 465 SERD-KEDKEQPPRKR 509
           +E   ++ +++PP+K+
Sbjct: 67  TEESARKSRKKPPKKK 82



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 405 METRMDSDNDREKENSKGYDSERDKEDK 488
           M    D D D+EK+  +  D ERDK DK
Sbjct: 1   MTADKDKDKDKEKDRDRDRDRERDKRDK 28



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
 Frame = -1

Query: 282  HGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLLQDLVGSHHAQN----------- 136
            H HE+ R+P  GT  YP D   + P P   +    H LQ +    HAQ+           
Sbjct: 1478 HEHEMLRHPVFGTP-YPRDLPGAIPPPMSAA----HQLQAM----HAQSAELQRLAMEQQ 1528

Query: 135  --HGCCLLYALHLLSQHDY 85
              HG   ++  HL SQ DY
Sbjct: 1529 WLHGHPHMHGGHLPSQEDY 1547

---

>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)|
           (MyT1-L)
          Length = 1186

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D   +YS D D  GDE    D    + DR  E  ++ +++ + E+ +  + E ++E++E+
Sbjct: 105 DEGEEYSEDNDEPGDE----DEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEE 160

---

>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2|
          Length = 875

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYR---GDHDRPMET----RMDSDNDREKENSKGYDSERDKEDKEQP 497
           D D E D RR RD +R    D+DR  E     R D  NDRE +  +   S  +  D ++ 
Sbjct: 3   DSDDEYDRRR-RDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRN 61

Query: 498 PRKRFS 515
            R+RFS
Sbjct: 62  RRERFS 67

---

>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2|
          Length = 358

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERR--ARDLYRGDHDRP--METRMDSDNDREKENSKGYDSERDKE 482
           D   D   DR+ +GD  R   RD    D DR     +R   D+D  +   +     RD++
Sbjct: 91  DRSRDRDRDRNRDGDRNRDRRRDNRSQDRDRHNNRSSRPSRDDDASRSRRRSTSRSRDRD 150

Query: 483 DKEQPPR 503
            K + P+
Sbjct: 151 HKPKDPK 157

---

>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           YGFV++T    AQ A+  M G+ +  R +R+N
Sbjct: 204 YGFVSFTSQDDAQNAMDSMQGQDLNGRPLRIN 235



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           Y FV Y Q   A  A+  ++GKQI N  V++N
Sbjct: 116 YAFVEYHQSHDANIALQTLNGKQIENNIVKIN 147

---

>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 1029

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 712 DSDSDSDSDSDSDSDSDSVSD---SDSDSDSDSESDSDSDSDSDSDSDSDSESDSD 764



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +   +
Sbjct: 704 DSESDSDSDSDSDSDSDSDSD---SDSDSVSDSDSDSDSDSESDSDSDSDSDSDSDSDSE 760



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYR-GDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D   A D     D D   E+  DSD+D + ++    DS+ D +
Sbjct: 874  DLDSDSDSDSDSDSDSDSASDSDSDSDSDSDSESDSDSDSDSDSDSDSASDSDSDSD 930



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
            D + D   D D + D     D    D D  +++  DSD+D + ++    DS+ D +
Sbjct: 848  DSDSDSDSDSDSDSDSDSDSD---SDSDSDLDSDSDSDSDSDSDSDSASDSDSDSD 900



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDL-----YRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
            D E D   D D + D   A D         D D    +   SDND + E+    DS+   
Sbjct: 904  DSESDSDSDSDSDSDSDSASDSDSDSDSASDSDSDSTSDTGSDNDSDSESDSNSDSDSGS 963

Query: 480  EDKEQPP 500
             +   PP
Sbjct: 964  NNNVVPP 970



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D  +++  DSD+D + ++    DS+ D +
Sbjct: 818 DSDSDSDSDSDSDSDSDSDSD---SDSDSDLDSDSDSDSDSDSDSDSDSDSDSDSD 870



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 788 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 840



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D E
Sbjct: 764 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 816



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 668 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSDSDSDSDSD 720



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERD 476
           D + D   D D + D     DL   D D   ++  DSD+D + ++    DS+ D
Sbjct: 824 DSDSDSDSDSDSDSDSDSDSDL---DSDSDSDSDSDSDSDSDSDSDSDSDSDSD 874



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D E D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 758 DSESDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 816



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 676 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSD 728



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +3

Query: 315  DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            D + D   D D + D     D    D D   ++  DSD+D + +++   DS+ D +   +
Sbjct: 850  DSDSDSDSDSDSDSDSDSDSD---SDSDLDSDSDSDSDSDSDSDSASDSDSDSDSDSDSE 906



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 790 DSDSDSDSDSDSDSDSDSDSD---SDSDSESDSDSDSDSDSDSDSDSDSDSDSDSD 842



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 820 DSDSDSDSDSDSDSDSDSDSD---SDSDLDSDSDSDSDSDSDSDSDSDSDSDSDSD 872



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           + D   D D E D     D    D D   E+  DSD+D + ++    DS+ D +
Sbjct: 732 DSDSDSDSDSESDSDSDSDS-DSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSD 784

---

>NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NUP159)|
          Length = 1460

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 300  ERGGFDHEMDYSMDRDHEGDERRA--RDLYRGDHDRPMETRMDSDNDREKENSKGYDSER 473
            E+  FD  M      DH+  E  A  +D  +    +  +  M  ++DR++  S+ YD   
Sbjct: 1023 EKENFDSNMAIKQFEDHQSSEEDASEKDSRQSSEVKESDDNMSLNSDRDESISESYDKLE 1082

Query: 474  DKEDKEQP 497
            D    E P
Sbjct: 1083 DINTDELP 1090

---

>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV Y+    A RA+ EM+GK IG + + +
Sbjct: 374 FGFVAYSNPEEALRALSEMNGKMIGRKPLYI 404

---

>DEK_HUMAN (P35659) Protein DEK|
          Length = 375

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           +R+  G  R+A+   R      +     SD D +K   +  D E DKE +E+PP+K   R
Sbjct: 207 ERNSSGMARKAK---RTKCPEILSDESSSDEDEKKNKEESSDDE-DKESEEEPPKKTAKR 262

---

>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVTY+       AI  +DG  +  RA+RV+
Sbjct: 237 FGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268

---

>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 327 DYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D S       ++RR+    R  HDR  +   D D DRE+E+ +  +  R  +D+++
Sbjct: 492 DSSSTAARRDEDRRSE---RSRHDRDRDRDRDRDRDREREHRRRTEDRRRHDDRQR 544

---

>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   +A + AI  M+G+ +  R++ VNE
Sbjct: 51  FGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNE 83

---

>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 973

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK-EDKEQ 494
           E +    RD E  ER  R+  R   +R  E   + + +REK+  K  + ERD  +DKE+
Sbjct: 555 EDEVKSKRDEEERERERREKER---EREREREKEKEREREKQKLKESEKERDSVKDKEK 610

---

>SH2P1_XENLA (Q4QR29) SH2 domain-binding protein 1|
          Length = 1157

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
 Frame = +3

Query: 321  EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYD------SERDKE 482
            E D   D+    DE  ARD    D  R  + R+ SD+D +  N  G D      S+R  E
Sbjct: 1018 EDDSDEDKLKIADEGHARDSDSDDGPRKSQKRVISDSDSDNGNKSGSDAGSPQKSQRSDE 1077

Query: 483  DKEQP-PRKR 509
            D +    RKR
Sbjct: 1078 DSDNAFARKR 1087

---

>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVTY+       AI  +DG  +  RA+RV+
Sbjct: 231 FGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 262

---

>NOP8_YEAST (Q08287) 60S ribosome subunit biogenesis protein NOP8|
          Length = 484

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERR---ARDLYRG-DHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           EMD   +   E  E+      DL +  D D+PM T  DSD +   E  KG + E ++E+K
Sbjct: 231 EMDSDENMSEEEKEKNNVILNDLLKDFDFDKPM-TLNDSDEELLTEQRKGEEEEEEEEEK 289

Query: 489 E 491
           E
Sbjct: 290 E 290

---

>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein|
          Length = 348

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   GKCYGFVTYTQHRAAQRAILEMDGKQIGN 89
           G+ +GFV++       RAI EM+GKQ+G+
Sbjct: 257 GRGFGFVSFANAEDQSRAIEEMNGKQVGD 285

---

>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = +3

Query: 315 DHEMDYSMD--RDHEGDERRARDLYRGD---HDRPMETRMDSDNDRE--KENSKGYDSER 473
           DH+   S D  R    D RR+R   R +     R  + R     DR+  K  SK  D E+
Sbjct: 313 DHKRSRSRDRRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 474 DKEDKEQ 494
           D++ KE+
Sbjct: 373 DRKSKEK 379

---

>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 946

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D   A D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 767 DSDSDSDSDSDSDSDSDSASDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 825



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 787 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 839



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D + D D + D     D    D D   ++  DSD+D + +++   DS+ D +
Sbjct: 743 DSDSDSNSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSASDSDSDSDSD 795



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 719 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSNSDSDSDSDSDSDSDSDSDSDSD 771



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D++ D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 647 DNDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 699



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D E D     D    D D   ++  DSD+  + ++S   DSE D     +
Sbjct: 819 DSDSDSESDSDSESDSDSDSDS-DSDSDSDSDSASDSDSGSDSDSSSDSDSESDSNSDSE 877



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D   D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 783 DSASDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSESDSDSESDSD 835



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 695 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 747



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 671 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 723



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  +SD+D E ++    DS+ D +
Sbjct: 793 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSESDSDSESDSDSDSDSDSDSD 845



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           + D + D D   D   A D    D+D   ++  DSD+D + ++    DS+ D +
Sbjct: 625 DSDSASDSDSASDSDSASDS-DSDNDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 677

---

>YKI8_YEAST (P36076) Hypothetical protein YKL088w|
          Length = 571

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 363 RRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           R+ARD   GD ++  E +  +DN+ + +     D E D+ED+E+
Sbjct: 504 RKARDEETGDKEQEQEEQEGADNEDDDDE----DDEEDEEDEEE 543

---

>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B|
           acidic chain); Legumin B beta chain (Legumin B basic
           chain)] (Fragment)
          Length = 338

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E  +S  ++ E +E+  R      H +  +   D + + E+E      SE+++ED+++
Sbjct: 54  EEEQSHSQRKEEEEEEQEQR---HRKHSKKEDEDEDEEEEEEREQRHRKHSEKEEEDEDE 110

Query: 495 P 497
           P
Sbjct: 111 P 111

---

>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 975

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 342 RDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK-EDKEQ 494
           RD E  ER  R+  R   +R  E   + + +REK+  K  + ERD  +DKE+
Sbjct: 564 RDEEERERERREKER---EREREREKEKEREREKQKLKESEKERDSAKDKEK 612

---

>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 928

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D   A D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 749 DSDSDSDSDSDSDSDSDSASDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 807



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 769 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 821



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D + D D + D     D    D D   ++  DSD+D + +++   DS+ D +
Sbjct: 725 DSDSDSNSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSASDSDSDSDSD 777



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 701 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSNSDSDSDSDSDSDSDSDSDSDSD 753



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D E D     D    D D   ++  DSD+  + ++S   DSE D     +
Sbjct: 801 DSDSDSESDSDSESDSDSDSDS-DSDSDSDSDSASDSDSGSDSDSSSDSDSESDSNSDSE 859



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D   D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 765 DSASDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSESDSDSESDSD 817



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 677 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 729



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 653 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 705



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  +SD+D E ++    DS+ D +
Sbjct: 775 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSESDSDSESDSDSDSDSDSDSD 827



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           + D + D D   D   A D    D+D   ++  DSD+D + ++    DS+ D +
Sbjct: 625 DSDSASDSDSASDSDSASDS-DSDNDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 677

---

>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVT +       AI  +DG+ +  RAVRVN
Sbjct: 192 FGFVTMSSESEVNDAIAALDGQTLDGRAVRVN 223

---

>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25|
          Length = 415

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 330 YSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           +S  RDH+ DER  R   R    RP + R D   DR+++     D  RD+  +      R
Sbjct: 244 HSSRRDHDRDERYDRAARRSASPRP-DRRRDDRRDRDQDQ----DYRRDRNSRSSRRDAR 298

Query: 510 FSR 518
            SR
Sbjct: 299 SSR 301

---

>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           +R   D +     DR  E D+RR     R   + P + R     ++E+E ++G +    +
Sbjct: 99  KRARCDGKESLLQDRRTEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQ 158

Query: 480 EDKEQPPRKR 509
           E  EQ  R+R
Sbjct: 159 ERLEQRDRQR 168

---

>ARP8_YEAST (Q12386) Actin-like protein ARP8|
          Length = 881

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           D + E +E    D    D+D   E   D+DN  E EN  G        DK  PP  + S+
Sbjct: 78  DEEDEDEEGEDEDEDEDDNDVDNEDENDNDNANENENELG-----SSRDKRAPPAVQTSK 132

---

>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +3

Query: 315 DHEMDYSMD--RDHEGDERRARDLYRGD---HDRPMETRMDSDNDRE--KENSKGYDSER 473
           DH+   S +  R    D RR+R   R +     R  + R     DR+  K  SK  D E+
Sbjct: 313 DHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 474 DKEDKEQPPR 503
           D++ KE+  R
Sbjct: 373 DRKSKEKEKR 382

---

>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein|
           (cAMP regulatory element associated protein 1)
           (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic
           acid-inducible phosphoprotein OA48-18)
          Length = 432

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +3

Query: 315 DHEMDYSMD--RDHEGDERRARDLYRGD---HDRPMETRMDSDNDRE--KENSKGYDSER 473
           DH+   S +  R    D RR+R   R +     R  + R     DR+  K  SK  D E+
Sbjct: 313 DHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 474 DKEDKEQPPR 503
           D++ KE+  R
Sbjct: 373 DRKSKEKEKR 382

---

>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +3

Query: 315 DHEMDYSMD--RDHEGDERRARDLYRGD---HDRPMETRMDSDNDRE--KENSKGYDSER 473
           DH+   S +  R    D RR+R   R +     R  + R     DR+  K  SK  D E+
Sbjct: 313 DHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQ 372

Query: 474 DKEDKEQPPR 503
           D++ KE+  R
Sbjct: 373 DRKSKEKEKR 382

---

>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D   A D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 750 DSDSDSDSDSDSDSDSDSASDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 808



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 770 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 822



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + +++   DS+ D +
Sbjct: 726 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSASDSDSDSDSD 778



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D   D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 766 DSASDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSESDSDSESDSD 818



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 702 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 754



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 678 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 730



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 654 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 706



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 630 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 682



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DS++D + ++    DS+ D +
Sbjct: 780 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSESDSDSDSDSDSDSDSDSD 832



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           + D + D D   D   A D    D+D   ++  DSD+D + ++    DS+ D +
Sbjct: 602 DSDSASDSDSASDSDSASDS-DSDNDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 654

---

>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + D   D D + D   A D    D D   ++  DSD+D + ++    DS+ D +   +
Sbjct: 750 DSDSDSDSDSDSDSDSDSASDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 808



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D E ++    DS+ D +
Sbjct: 770 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 822



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + +++   DS+ D +
Sbjct: 726 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSASDSDSDSDSD 778



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D   D   D D + D     D    D D   ++  DSD+D + ++    DSE D +
Sbjct: 766 DSASDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSESDSDSESDSD 818



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 702 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 754



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 678 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 730



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 654 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 706



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 630 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 682



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DS++D + ++    DS+ D +
Sbjct: 780 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSESDSDSESDSDSDSDSDSDSDSDSD 832



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           + D + D D   D   A D    D+D   ++  DSD+D + ++    DS+ D +
Sbjct: 602 DSDSASDSDSASDSDSASDS-DSDNDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 654

---

>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-5 (EC 3.6.1.-) (Sex determination protein
           mog-5) (Masculinization of germ line protein 5)
          Length = 1200

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 327 DYSMDRDHEGD-ERRARDLYRGDH-DRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D    R   GD +RR R   R D  DR    R D D DR + + +G D +RD+ D+
Sbjct: 165 DRKRRRSRSGDRDRRRRSRSREDRRDRDRRDR-DRDRDRGRGDRRGDDRQRDRRDR 219

---

>CWC25_SCHPO (Q9Y805) Pre-mRNA-splicing factor cwc25 (Complexed with cdc5|
           protein 25) (Cell cycle control protein cwf25)
          Length = 376

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
 Frame = +3

Query: 330 YSMDRDHEGDERRARDL-YRGDHDRPMETRMDSD---NDREKENSKGYDSERD 476
           YS+D D +  ERR RD  +R + DR  E R D++   +D+ + + + Y ++R+
Sbjct: 159 YSLDSDRKSKERRHRDRHHRSNQDRSRE-RSDNEQHSSDKREHSRRSYRNDRN 210

---

>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDER------RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           HE  Y   R H+ D R      R + +  G   RP E       DRE+E  +  D+ RD+
Sbjct: 655 HEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRE------RDRERERDRPRDNRRDR 708

Query: 480 EDKEQPPRKR 509
           E      R+R
Sbjct: 709 ERDRGRDRER 718



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = +3

Query: 300 ERGGFDHEMDYSM--------DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           E  G DHE   S         + + EG E    +    D D   +  +D D + E++  +
Sbjct: 177 EEYGSDHETGSSASSEQGNNTENEEEGGEEDVEEDEEVDEDGDDDEEVDEDAEEEEDEEE 236

Query: 456 GYDSERDKEDKEQ 494
             + E ++E++E+
Sbjct: 237 DEEEEDEEEEEEE 249

---

>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 989

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + E+    DS+ D +
Sbjct: 826 DSDSDSESDSDSDSDSDSDSDS-DSDSDSDSESDSDSDSDSDSESDSDSDSDSDSD 880



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + E+    DS+ D +
Sbjct: 792 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSASDSDSDSDSESDSDSDSDSDSD 844



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D   A      D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 804 DSDSDSDSDSDSDSDSDSA-----SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSE 856



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 778 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSE 832



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 754 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 806



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 730 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 782



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 706 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 758



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 682 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 734

---

>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor|
           YT521)
          Length = 727

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDER------RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           HE  Y   R H+ D R      R + +  G   RP E       DRE+E  +  D+ RD+
Sbjct: 644 HEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRE------RDRERERDRPRDNRRDR 697

Query: 480 EDKEQPPRKR 509
           E      R+R
Sbjct: 698 ERDRGRDRER 707

---

>YG58_YEAST (P53313) Hypothetical 86.6 kDa protein in PFK1-TDS4 intergenic|
           region
          Length = 767

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + ++ +D D E D+    +    D D+  +  M+ D+D EK+N+KG +S+ D E  + 
Sbjct: 555 DADANWEVDVDSEEDDVDG-EWVTMDSDKEYDVDME-DSDDEKDNAKGKESDSDLELSDD 612

Query: 495 PPRK 506
              K
Sbjct: 613 DDEK 616

---

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           YGFV +T     + A+ EM G+  G+R +RV
Sbjct: 230 YGFVRFTDENDQKSALAEMQGQICGDRPIRV 260



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 3   GKCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           GK  GFV +   ++A+ AI ++ G  +GN  +R++
Sbjct: 337 GKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLS 371

---

>HSP83_DROPS (P04809) Heat shock protein 83 (HSP 82) (Fragment)|
          Length = 375

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 360 ERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           E+   D    D  +  E + D D D  K    G D + DK+DK+   +K
Sbjct: 215 EKEVSDDEADDEKKDDEAKKDMDTDEPKIEDVGEDEDADKKDKDGKKKK 263

---

>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +3

Query: 300 ERGGFDHEMDYSM----DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDS 467
           +RG  D++  Y       R   G   R  D YRG  DR  E R D  +DR   +   Y  
Sbjct: 260 DRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYRGGGDR-YEDRYDRRDDRSWSSRDDYSR 318

Query: 468 ERDKEDKEQPPRK 506
           +  + D   PP++
Sbjct: 319 DDYRRDDRGPPQR 331

---

>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +3

Query: 300 ERGGFDHEMDYSM----DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDS 467
           +RG  D++  Y       R   G   R  D YRG  DR  E R D  +DR   +   Y  
Sbjct: 260 DRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYRGGGDR-YEDRYDRRDDRSWSSRDDYSR 318

Query: 468 ERDKEDKEQPPRK 506
           +  + D   PP++
Sbjct: 319 DDYRRDDRGPPQR 331

---

>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           DH       R H+   R   D Y  +  R  E   D D DR++E  +
Sbjct: 498 DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDR 544

---

>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           DH       R H+   R   D Y  +  R  E   D D DR++E  +
Sbjct: 498 DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDR 544

---

>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           DH       R H+   R   D Y  +  R  E   D D DR++E  +
Sbjct: 498 DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDR 544

---

>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 935

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   E+  DSD+D + E+    DS+ D +
Sbjct: 772 DSDSDSESDSDSDSDSDSDSDS-DSDSDSDSESDSDSDSDSDSESDSDSDSDSDSD 826



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + E+    DS+ D +
Sbjct: 738 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSASDSDSDSDSESDSDSDSDSDSD 790



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D   A      D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 750 DSDSDSDSDSDSDSDSDSA-----SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSE 802



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D + +
Sbjct: 724 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSE 778



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 700 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 752



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           D + D   D D + D     D    D D   ++  DSD+D + ++    DS+ D +
Sbjct: 676 DSDSDSDSDSDSDSDSDSDSD---SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 728

---

>HSP83_DROPE (O16076) Heat shock protein 83 (HSP 82) (Fragment)|
          Length = 269

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 360 ERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           E+   D    D  +  E + D D D  K    G D + DK+DK+   +K
Sbjct: 215 EKEVSDDEADDEKKDDEAKKDMDTDEPKIEDVGEDEDADKKDKDGKKKK 263

---

>HSP83_DROMI (O16087) Heat shock protein 83 (HSP 82) (Fragment)|
          Length = 269

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +3

Query: 360 ERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           E+   D    D  +  E + D D D  K    G D + DK+DK+   +K
Sbjct: 215 EKEVSDDEADDEKKDDEAKKDMDTDEPKIEDVGEDEDADKKDKDGKKKK 263

---

>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           DH       R H+   R   D Y  +  R  E   D D DR++E  +
Sbjct: 499 DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDR 545

---

>PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regulatory subunit|
           2 (PP4R2)
          Length = 402

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKED 485
           G+D+  D  ++   E DE    + Y  DH+   E   D DND + +  +  + E D  D
Sbjct: 191 GYDNHGDVLIEEYEEMDEEFEDEDYE-DHEDEEEDEEDEDNDSDVDEMEAEEVEEDASD 248

---

>BFR2_GIBZE (Q4I327) Protein BFR2|
          Length = 538

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 327 DYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           DY    D+EG E    D    + D  ++  +D + D + E+ +  D E   +D+E
Sbjct: 156 DYMSSSDNEGAELGGSDSEDEEMDDGLDALVDGEGDSDDESDENDDEEGSGDDEE 210

---

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +3

Query: 339  DRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYD----SERDKEDKEQPPRK 506
            DR  + +ER   D    + ++  E    +  DREK+  +  +     +RDKE KE+  R+
Sbjct: 1948 DRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREERELREKEQRDKEQKEKEIRE 2007

Query: 507  R 509
            +
Sbjct: 2008 K 2008



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 360  ERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            ER  +D      +R  E R   + ++E+E  K    +R+K+++E+
Sbjct: 1943 EREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREE 1987

---

>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 671

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
 Frame = +3

Query: 360 ERRARDLYRG----DHDRPMETRMDSDNDREKENS--KGYDSERDKEDKEQ 494
           ERR ++L+R     D +   +++ D DN+ ++EN   K   SE+DK+  E+
Sbjct: 217 ERRVKELFRSFDDDDENSVSDSKKDEDNEEDEENEERKKVVSEKDKKRVEK 267

---

>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           K +GFVT +  +  Q+AI  ++G  +  R +RV+E
Sbjct: 298 KGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSE 332

---

>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
 Frame = +3

Query: 333 SMDRDHEGDERRAR--DLYRGDHDRPMETRM-------DSDNDREKENSKGYD-SERDKE 482
           S +RD E + RR+R  D  R    R  E R        D D DR++ +S+  + + R++E
Sbjct: 245 SRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERE 304

Query: 483 DKEQ 494
            KE+
Sbjct: 305 RKEE 308

---

>ANR12_HUMAN (Q6UB98) Ankyrin repeat domain-containing protein 12 (Ankyrin|
            repeat-containing cofactor 2) (GAC-1 protein)
          Length = 2062

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +3

Query: 336  MDRDHEGDE-RRARDLYRGDHDRPMETR-MDSDNDREKENSKGYDSERDKE-DKEQPPRK 506
            MDR H+ ++  + R L        ME +   SDN    ++ KG + E+D+E DK++  R 
Sbjct: 907  MDRKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRD 966

Query: 507  RFS 515
            + S
Sbjct: 967  KES 969

---

>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 420 DSDNDREKENSKGYDSERDKEDKEQPP 500
           DSD D ++E+    D + D+ED+ +PP
Sbjct: 143 DSDEDEDEEDEDDSDEDEDEEDEFEPP 169

---

>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25|
          Length = 561

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E GG     D   +R  E    R+R+    D  R    R+ S  DR+++  +  D +RD+
Sbjct: 250 EEGGRSRSRDRYRNRSRERYRDRSREERSRDRSRE---RLRSRRDRDRDRDRDRDRDRDR 306

Query: 480 EDKEQPPR 503
           ++ +   R
Sbjct: 307 DNVQSSGR 314

---

>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT++  ++   AI  M+GK++  R + VN+
Sbjct: 51  FGFVTFSSEQSMLDAIENMNGKELDGRNITVNQ 83

---

>IF2_BORBU (O51741) Translation initiation factor IF-2|
          Length = 882

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
 Frame = +3

Query: 306 GGFDHEMD-----YSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSE 470
           GG+    D     YS +RD+ G   + RD   G + +  + R    +      + GY   
Sbjct: 108 GGYSQNRDNRTGGYSQNRDNRGGYSQGRDNRTGGYSQSRDNRTGGYSQNRDNRTGGYSQN 167

Query: 471 RD 476
           RD
Sbjct: 168 RD 169

---

>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   ++ + AI  M+G+ +  R++ VNE
Sbjct: 51  FGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNE 83

---

>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K YGFV+ T +  A  AI  ++G  +GNR ++V+
Sbjct: 443 KGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVS 476

---

>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 331 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 364

---

>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 318 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 351

---

>HDAC1_DROME (Q94517) Histone deacetylase Rpd3 (HD) (dRPD3)|
          Length = 521

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           E +YS   D     RR    Y+G   RP   R+D D +  K +S+     +D+++K
Sbjct: 415 ENEYSDSEDEGEGGRRDNRSYKGQRKRP---RLDKDTNSNKASSETSSEIKDEKEK 467

---

>PAF1_YEAST (P38351) RNA polymerase-associated protein 1 (PAF1 protein)|
          Length = 445

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/54 (20%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERD 476
           D E    + ++ EGD +       G++++  E + + +N++++EN +  +   D
Sbjct: 368 DEEQPEDVKKESEGDSKTEGSEQEGENEKDEEIKQEKENEQDEENKQDENRAAD 421

---

>HOX3_XENLA (P50476) Homeobox protein XHOX-3|
          Length = 388

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/69 (27%), Positives = 24/69 (34%)
 Frame = -1

Query: 453 LNFPSPCHYRNPYASPXXXXXXXXXXX*RASHLLHDLDPWNSPSHDQIPHVHHICLYHGH 274
           L +P P H   PY S               S  L  LD +   SH   P    +C +   
Sbjct: 254 LPYPFPSHLPLPYYSHMGISAGSTAAATPFSAPLRPLDTFRVLSH-PYPRPDLLCAFRHP 312

Query: 273 EVYRYPCHG 247
            +Y  P HG
Sbjct: 313 SIYASPAHG 321

---

>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   ++ + AI  M+G+ +  R++ VNE
Sbjct: 51  FGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNE 83

---

>ITF2_RAT (Q62655) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (RITF-2) (SL3-3 enhancer factor 2)
           (SEF-2) (R8f DNA-binding protein)
          Length = 589

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 12/87 (13%)
 Frame = -1

Query: 351 HDLDPWNSPS------------HDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSSP 208
           H  DPW+S S            +  IP     C  H HE   YP H +      D NSS 
Sbjct: 141 HSSDPWSSSSGMNQPGYGGMLGNSHIPQSSSYCSLHPHERLSYPSHSS-----ADINSSL 195

Query: 207 YPFGPSIHPFHLLQDLVGSHHAQNHGC 127
               P +  FH      G++H     C
Sbjct: 196 ----PPMSTFH----RSGTNHYSTSSC 214

---

>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K YGFV+ T +  A  AI  ++G  +GNR ++V+
Sbjct: 479 KGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVS 512

---

>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 343 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 376

---

>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 338 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 371

---

>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 317 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 350

---

>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 317 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 350

---

>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           K +GFVT T +  A  AI  ++G ++G+R ++V+
Sbjct: 317 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 350

---

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 426 DNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           D D++K + +  +S R+K ++ + PR+R SR
Sbjct: 148 DEDKDKRDKEEKESSREKRERSRSPRRRKSR 178

---

>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYR---------GDHDRPMETRMDSDNDREKENSKGYD-SERDKE 482
           S +RD E + RR+R   R          +  R  E   D D DR++ +S+  + + R++E
Sbjct: 245 SRERDKERERRRSRSRDRRRRSRSRDKDERRRSRERSKDKDRDRKRRSSRSRERARRERE 304

Query: 483 DKEQ 494
            KE+
Sbjct: 305 RKEE 308

---

>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 384 RGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           RG +D  ++     DN+RE+E    Y  ER++ED+E P R
Sbjct: 200 RGGNDVNIKHSGREDNERERER---YRLEREREDREGPGR 236



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETR---MDSDNDREKENSKGYDSERDKE-DKEQPP 500
           S  R  E  +RRA    R D     + R    + D DRE+E  K     R++E  +E+  
Sbjct: 281 SRSRSRERRKRRAGSRERYDEFDRRDRRDRERERDRDREREKKKKRSKSRERESSRERRE 340

Query: 501 RKRFSR 518
           RKR  R
Sbjct: 341 RKRERR 346

---

>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)|
          Length = 3036

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +3

Query: 312 FDHEMDYSMDR--DHEGDE--RRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           F H++    D+  DHE D+  R   +  + D +R +  ++D D   ++E+  G  S   +
Sbjct: 407 FMHQLRKLSDKQVDHENDDADREDEEHSQEDRERGLHMKLDHDLSLDRESEAGTGSSEHE 466

Query: 480 EDKEQPPRKRFSR 518
           + + +   + +SR
Sbjct: 467 DGEREGSPRTYSR 479

---

>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           Y FV + +HR A  A+  M+G++I  + V+VN
Sbjct: 48  YCFVEFHEHRHAAAALAAMNGRKIMGKEVKVN 79

---

>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           Y FV + +HR A  A+  M+G++I  + V+VN
Sbjct: 48  YCFVEFHEHRHAAAALAAMNGRKIMGKEVKVN 79

---

>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT++   +   AI  M+GK++  R + VN+
Sbjct: 51  FGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83

---

>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+   ++ + AI  M+G+++  R + VNE
Sbjct: 49  FGFVTFKDEKSMRDAIEGMNGQELDGRNITVNE 81

---

>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631 intergenic|
           region
          Length = 203

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKE 482
           S+  D E ++  + D    D D   ++  DSD+D +++  +  DSE ++E
Sbjct: 121 SLSEDDEEEDSESED---EDEDEDSDSDSDSDSDSDEDEDEDEDSEEEEE 167

---

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
 Frame = -1

Query: 282  HGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLLQDLVGSHHAQN----------- 136
            H HE+ R+P  GT  YP D   + P P   +    H LQ +    HAQ+           
Sbjct: 1485 HEHEMLRHPVFGTP-YPRDLPGAIPPPMSAA----HQLQAM----HAQSAELQRLAMEQQ 1535

Query: 135  --HGCCLLYALHLLSQHDY 85
              HG   ++  HL SQ DY
Sbjct: 1536 WLHGHPHMHGGHLPSQEDY 1554



 Score = 29.6 bits (65), Expect = 5.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 405 METRMDSDNDREKENSKGYDSERDKEDK 488
           M    D D D+EK+  +  D ER+K DK
Sbjct: 1   MTADKDKDKDKEKDRDRDRDREREKRDK 28



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 17/80 (21%)
 Frame = +3

Query: 321 EMDYSMDRDHEGDERRARDLYRGDHDRPME-----------------TRMDSDNDREKEN 449
           + D   D++ + D  R R+  + D  R  E                    D   D + +N
Sbjct: 4   DKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDN 63

Query: 450 SKGYDSERDKEDKEQPPRKR 509
           +     E  K++K++PP+K+
Sbjct: 64  NSATAEESTKKNKKKPPKKK 83

---

>HSP83_DROPB (O16068) Heat shock protein 83 (HSP 82) (Fragment)|
          Length = 269

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = +3

Query: 309 GFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDK 488
           G+  +     +R  E  +  A D  + D     E + D D D  K    G D + DK+DK
Sbjct: 203 GYPXKXXXEKERXKEVSDDEADDEKKDD-----EAKKDMDTDEPKIEDVGEDEDADKKDK 257

Query: 489 EQPPRK 506
           +   +K
Sbjct: 258 DGKKKK 263

---

>FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)|
           (p120/p130) (SLP-76-associated phosphoprotein)
           (SLAP-130)
          Length = 819

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSER----DKE 482
           D   D  M  D  G+    ++   G+    +++  + D  REKE  K  + ER    ++E
Sbjct: 424 DENQDGVMHSDGTGNLEEEQES-EGETYEDIDSSKERDKKREKEEKKRLELERKEQKERE 482

Query: 483 DKEQPPRKRF 512
            KEQ  +K+F
Sbjct: 483 KKEQELKKKF 492

---

>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25|
          Length = 447

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSD-----NDREKENSKGYD 464
           +RG  D   D   DR H        D +R    R    R  S      +DR++ + + Y 
Sbjct: 179 DRGDRDRSRD--RDRSHRRSRHEDEDAHRSHRHRSHRHRSRSPLSPDRSDRKRGDDRDYR 236

Query: 465 SERDKEDKEQPPRKRFSR 518
            ERD+ D  +   +   R
Sbjct: 237 DERDRRDDRRDEHRGHDR 254

---

>VGFR2_COTJA (P52583) Vascular endothelial growth factor receptor 2 precursor (EC|
            2.7.10.1) (VEGFR-2) (Endothelial kinase receptor EK1)
            (Quek 1) (Quek1)
          Length = 1348

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 363  RRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
            R+ ++ Y GD    ++ R+DS    +   S G+  ER   D E+
Sbjct: 937  RQGKENYTGDISTDLKQRLDSITSSQSSTSSGFVEERSLSDVEE 980

---

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 426 DNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           D D++K + +  +S R+K ++ + PR+R SR
Sbjct: 148 DEDKDKRDKEEKESSREKRERSRSPRRRKSR 178

---

>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC|
           3.6.1.-)
          Length = 1194

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 327 DYSMDRDHEGDERRARDLYRG-DHDRPMETRMDSDNDREKENSKGYDSERDK 479
           DY      +GD RR+RD  RG D  R  + R D   D ++E     D  RD+
Sbjct: 80  DYYRGSRRDGDRRRSRD--RGLDRLRSPDRRRDRSRDPDREYRPRRDDSRDR 129

---

>YP158_YEAST (Q99299) Protein YPL158C|
          Length = 758

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           ++E D S  +  +G   RA +    D D   +   + +ND E++     D E D+E++E+
Sbjct: 632 EYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEENDDEEDEEDEEDDEDDEEEEEK 691

---

>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)|
          Length = 392

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
 Frame = +3

Query: 333 SMDRDHEGDERRA-------RDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           S DR  E  +RR+       +DL   D DR    R   D DR K+  + Y+S   + +  
Sbjct: 323 SRDRSRERSKRRSSKERFRDQDLASRDRDRSSRDRSPRDRDR-KDKKRSYESANGRSEDR 381

Query: 492 QPPRKR 509
           +   +R
Sbjct: 382 RSSEER 387

---

>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 49  FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81

---

>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 49  FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81

---

>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 49  FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81

---

>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 49  FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81

---

>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 49  FGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81

---

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 426 DNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           D D++K + +  +S R+K ++ + PR+R SR
Sbjct: 148 DEDKDKRDKEEKESSREKRERSRSPRRRKSR 178

---

>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 420 DSDNDREKENSKGYDSERDKEDKEQP 497
           D D + E EN K  D+E  +ED+E P
Sbjct: 200 DEDEEEESENKKDDDNEEAEEDEEDP 225

---

>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVNE 110
           +GFVT+     A+ A++ M+GK +  R +RV++
Sbjct: 48  FGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80

---

>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           + FVT      A+ AI   DG Q+G R V+VN
Sbjct: 157 FAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVN 188

---

>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           + E +   D + E D     D    D D   E   + D+D E ++    + E D+E++E+
Sbjct: 600 EEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEE 659

---

>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVT +       AI  +DG+ +  R +RVN
Sbjct: 234 FGFVTMSSEAEMSEAIANLDGQTLDGRTIRVN 265

---

>NDF1_MESAU (Q60430) Neurogenic differentiation factor 1 (NeuroD1) (Beta-cell|
           E-box trans-activator 2) (BETA2)
          Length = 355

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 333 SMDRDHEGDERRAR-DLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           S D DHE D++    +    + D       + D D + E     + E D++ K + P+K+
Sbjct: 29  SQDEDHEADKKEDELEAMNAEEDSLRNGGDEEDEDEDLEEEDEEEEEDDQKPKRRGPKKK 88

---

>YP74_CAEEL (Q09221) Hypothetical protein B0228.4|
          Length = 1633

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +3

Query: 345 DHEGDERRARDLYRGDHDRPMETRMDSDNDRE---KENSKG----YDSERDKEDKEQPP 500
           D   D+ RA+D  RGD    +  + +  N+R+   ++ S G     ++E + E+K Q P
Sbjct: 555 DTTTDDERAKDFLRGDRSSRLSPQSERKNERQIQIRQQSSGPTNRRETEIEYEEKRQGP 613

---

>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a)
          Length = 1382

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 18/74 (24%)
 Frame = +3

Query: 339  DRDHEGDERRARDL---------YRGDHDRPMETRMDSDN------DREKENSKGYDSER 473
            DR H  DE R R L          R D DR     MD D       + ++ + +G D +R
Sbjct: 927  DRSHRRDEERPRRLGDDEDREPSLRPDDDRVPRRGMDDDRGPRRGPEEDRFSRRGADDDR 986

Query: 474  D---KEDKEQPPRK 506
                  D ++PPR+
Sbjct: 987  PSWRNTDDDRPPRR 1000

---

>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 488

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 15/73 (20%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARD------------LYRGDHDRP---METRMDSDNDREKEN 449
           D + D   D +  G+E+R RD              RGD DR       R D D  R +E 
Sbjct: 31  DVKPDVKSDLNGNGEEKRDRDDEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRER 90

Query: 450 SKGYDSERDKEDK 488
            +    +R+++D+
Sbjct: 91  RRDRSRDRNRDDR 103

---

>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           Y FV + +HR A  A+  M+G++I  + V+VN
Sbjct: 50  YCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81

---

>CVCB_PEA (P13919) Convicilin precursor (Fragment)|
          Length = 386

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +3

Query: 345 DHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           + EG   R R     +  R  E     +   ++E  + Y  +R+KED+E+  + ++ R
Sbjct: 70  EEEGQRERGRQEGEKEEKRHGEWGPSYEKQEDEEEKQKYRYQREKEDEEEKQKYQYQR 127

---

>ECM2_HUMAN (O94769) Extracellular matrix protein 2 precursor (Matrix|
           glycoprotein SC1/ECM2)
          Length = 699

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 351 EGDERRARDLYRGDHDRPM--ETRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           EGD R      R   +R +  + +     + E E  +G + E D+ED+E P R
Sbjct: 242 EGDSRGGDRKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEEDEEDPVR 294

---

>PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16|
           (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH
           box protein 38)
          Length = 1227

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +3

Query: 357 DERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           +  R R+  R +H     ++ + D  +EK   + YD +RD++++++
Sbjct: 130 ERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDERDR 175

---

>MAK5_CANGA (Q6FY67) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)|
          Length = 733

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHD----RPMETRMDSDNDREKENSKGYDSERDKEDKEQP 497
           +M+++ +GD   A +    + D       E +   +  R ++  KG DSE+ +++KE P
Sbjct: 72  AMEQEDDGDVEEAEEEEEEEEDVAEADEPEVKQKQEQARVEQIDKGVDSEKHEDEKETP 130

---

>ARI4A_HUMAN (P29374) AT-rich interactive domain-containing protein 4A (ARID|
           domain-containing protein 4A) (Retinoblastoma-binding
           protein 1) (RBBP-1)
          Length = 1257

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 336 MDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           +D D+E  E++  +L  G  + P +        +EK+  K  DS++D +++E+  ++R
Sbjct: 503 VDDDYETAEKKENELLLGRKNTPKQ--------KEKKIKKQEDSDKDSDEEEEKSQER 552

---

>VU79_HHV6U (P52529) Protein U79|
          Length = 344

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           ++DR    DE R R   + +  +  +T    D+DR K+  +    +R+ EDK QP +K  
Sbjct: 154 ALDRKKHDDEHRKRSGKQKEKRKVEDTDKKKDDDRRKQEER----KRNDEDK-QPDKKEE 208

Query: 513 S 515
           S
Sbjct: 209 S 209

---

>GNL3_MOUSE (Q8CI11) Guanine nucleotide-binding protein-like 3 (Nucleolar|
           GTP-binding protein 3) (Nucleostemin)
          Length = 538

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 336 MDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKG 458
           +DR  E + +R  ++  GD    +ETR +SD  + K+   G
Sbjct: 80  LDRQKEQERKRKLEVSPGDEQSNVETREESDEPKRKKAKAG 120

---

>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           Y FV + +HR A  A+  M+G++I  + V+VN
Sbjct: 67  YCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 98

---

>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 354 GDERRARDLYRGD----HDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           G+  R R   RG     H R  E       +RE E  +G ++ER+ E + +  R+R
Sbjct: 66  GEAERQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRER 121

---

>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1156

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 339 DRDHEGDERRARDLYRGDHDRPMETRMDSDNDR 437
           DR H+ D  R RD  R DHD P+E     D  R
Sbjct: 73  DRRHDRDRNRERD--RRDHDSPIEAAPSPDGRR 103

---

>MFT1_YEAST (P33441) Mitochondrial fusion target protein|
          Length = 392

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           E  G + + DY  D D E  ER  R          +E     + D ++E+   YD + D+
Sbjct: 254 EAEGDNIDEDYESDEDEERKERFKRQRSM------VEVNTIENVDEKEESDHEYDDQEDE 307

Query: 480 EDKEQ 494
           E++E+
Sbjct: 308 ENEEE 312

---

>LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2|
          Length = 392

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
 Frame = +3

Query: 333 SMDRDHEGDERRA-------RDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           S DR  E  +RR+       +DL   D DR    R   D DR K+  + Y+S   + +  
Sbjct: 323 SRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR-KDKKRSYESANGRSEDR 381

Query: 492 QPPRKR 509
           +   +R
Sbjct: 382 RSSEER 387

---

>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 399 RPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           R  E   D + DRE+E  +  D ER++E      ++  SR
Sbjct: 401 RERERERDRERDRERERERDRDREREREQSISSSQQHLSR 440

---

>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDR--EKENSKGYDSERDKEDK 488
           + E +   D + E DE    + +  + D   +   D D+D   E+E   G D E + ED+
Sbjct: 168 EEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDE 227

Query: 489 EQ 494
           ++
Sbjct: 228 DE 229

---

>HSP83_DROAV (O02192) Heat shock protein 83 (HSP 82)|
          Length = 716

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 390 DHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           D D+  + + + D D  K    G D + DK+DK+   +K
Sbjct: 224 DDDKKEDEKKEMDTDEPKIEDVGEDEDADKKDKDAKKKK 262

---

>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
           protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           S DR+ + D  R R+  R DH R   +R  S   R +E +K     R +   + PP+ R 
Sbjct: 179 SRDRNRDRDRDRERNRDR-DHKRRHRSRSRS-RSRTRERNKVKSRYRSRSRSQSPPKDRK 236

Query: 513 SR 518
            R
Sbjct: 237 DR 238

---

>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 6   KCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           K +GFV + + R A+ A+   DGK +  R +RV
Sbjct: 60  KGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92

---

>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Runt-related transcription factor-binding protein 2)
            (Monocytic leukemia zinc finger protein) (Zinc finger
            protei
          Length = 2004

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 390  DHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
            + D   ET  + D+D + E+    +S + KE +EQP R+
Sbjct: 1301 EEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRE 1339

---

>ITF2_HUMAN (P15884) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (SL3-3 enhancer factor 2) (SEF-2)
          Length = 667

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 13/88 (14%)
 Frame = -1

Query: 351 HDLDPWNSPS-------------HDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSS 211
           H  DPW+S S                IP     C  H HE   YP H +      D NSS
Sbjct: 222 HSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSS-----ADINSS 276

Query: 210 PYPFGPSIHPFHLLQDLVGSHHAQNHGC 127
                P +  FH      G++H     C
Sbjct: 277 L----PPMSTFH----RSGTNHYSTSSC 296

---

>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAV 98
           YG+V +     A++AI EM GK+I  R +
Sbjct: 211 YGYVDFENKSYAEKAIQEMQGKEIDGRPI 239

---

>ITF2_MOUSE (Q60722) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (MITF-2) (SL3-3 enhancer factor 2)
           (SEF-2) (Class A helix-loop-helix transcription factor
           ME2)
          Length = 670

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 13/88 (14%)
 Frame = -1

Query: 351 HDLDPWNSPS-------------HDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSS 211
           H  DPW+S S                IP     C  H HE   YP H +      D NSS
Sbjct: 221 HSSDPWSSSSGMNQPGYGGMLGNSSHIPQSSSYCSLHPHERLSYPSHSS-----ADINSS 275

Query: 210 PYPFGPSIHPFHLLQDLVGSHHAQNHGC 127
                P +  FH      G++H     C
Sbjct: 276 L----PPMSTFH----RSGTNHYSTSSC 295

---

>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 3   GKCYGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           G  + FV +  HR A+ A+   DG +   R +RV
Sbjct: 45  GPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRV 78

---

>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 748

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENS-----KGYD 464
           E G  D E + ++D    G +R+A +    D +   E   D D+D++ E S     KG D
Sbjct: 142 EPGESDDEDELALDGFGMGVKRKATEENEEDEEDEEEEDDDEDDDKKTEMSQADLGKGKD 201

Query: 465 SERDKEDKEQPPRKRF 512
            + D E+  +     F
Sbjct: 202 EDEDIEEDTKEEMAEF 217

---

>SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2|
          Length = 523

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 330 YSMDRDHEGDERRARD-LYRGDHDRPMETRMDSDNDREKE-NSKGYDSERD 476
           +S  R +EGD+   RD  Y  D DR   +    D DR ++  S+ YD +R+
Sbjct: 441 HSRRRKYEGDDGDRRDDRYYRDRDRERRSDPVRDRDRNRDRKSRYYDDDRN 491

---

>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           YGFV Y   + A+RAI  ++G ++ ++ ++V+
Sbjct: 63  YGFVNYVTAKDAERAISTLNGLRLQSKTIKVS 94

---

>YNE1_CAEEL (P30640) Hypothetical protein R08D7.1|
          Length = 458

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 342 RDHEGDERRARDLYRGDHDRPME-TRMDSDNDREKENSKGYDSERDKEDKEQPPRK 506
           R+     R  RD +  D+  P   +R DSDN   +       + R K+D   PPRK
Sbjct: 175 RNRRSPPRTRRDRHDSDNSPPRNRSRRDSDNSPPRRRPSS-PARRRKDDDLSPPRK 229



 Score = 29.3 bits (64), Expect = 6.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 399 RPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKR 509
           RP   R DSDN   + +   +DS++D      PPR+R
Sbjct: 120 RPSRKRNDSDNSPPRPSRNRHDSDKD----NSPPRRR 152

---

>TIM54_SCHPO (O94624) Mitochondrial import inner membrane translocase subunit|
           tim54
          Length = 347

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 399 RPMET-RMDSDNDREKENSKGYDSERDKED 485
           R +ET +++++N  EKE  +G D + DKED
Sbjct: 172 RKLETEKLEANNKEEKEEKEGKDDKDDKED 201

---

>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6|
          Length = 548

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK 455
           DH       R H+   R   D Y  +  R  E   D + DR++E  +
Sbjct: 495 DHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRERDRDRERDR 541

---

>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           D + +   D D + DE +      GD     ++  D D++  +EN    D E D ED E+
Sbjct: 620 DEDDEDEEDDDDDDDEDKEDSSEDGDSS---DSSSDEDSEEGEENEDEEDEEDDDEDNEE 676

---

>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVT +       AI  +DG+ +  RA+RVN
Sbjct: 287 FGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318

---

>ITF2_CANFA (P15881) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (Thyroglobulin promoter transcription
           factor TFE)
          Length = 642

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 13/88 (14%)
 Frame = -1

Query: 351 HDLDPWNSPS-------------HDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSS 211
           H  DPW+S S                IP     C  H HE   YP H +      D NSS
Sbjct: 197 HSSDPWSSSSGMNQPGYGGMLGSSSHIPQSSSYCSLHPHERLSYPSHSS-----ADINSS 251

Query: 210 PYPFGPSIHPFHLLQDLVGSHHAQNHGC 127
                P +  FH      G++H     C
Sbjct: 252 L----PPMSTFH----RSGTNHYSTSSC 271

---

>SPT6H_CAEBR (Q93148) Suppressor of Ty 6 homolog (Abnormal embryogenesis protein|
           5)
          Length = 1521

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 21/86 (24%)
 Frame = +3

Query: 324 MDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSK---------------G 458
           +D ++DR  E  + R R     D D P+      D+D + E                  G
Sbjct: 101 IDENLDRQGERKKNRVRLGDSSDEDEPIRRSNQDDDDLQSERGSDDGDKRRGHGGRGGGG 160

Query: 459 YDSERDK------EDKEQPPRKRFSR 518
           YDS+ D+      ED    PR+   R
Sbjct: 161 YDSDSDRSEDDFIEDDGDAPRRHRKR 186

---

>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRVN 107
           +GFVT         AI  +DG+ +  R +RVN
Sbjct: 273 FGFVTMASEAEMSDAIANLDGQSLDGRTIRVN 304

---

>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)|
          Length = 1374

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 321 EMDYSMDRDHEG---DERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKE 491
           E   S+DR   G   D RR    YR D+DR          +R +E  +  +  R ++++ 
Sbjct: 242 ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERER--ERHRHRDNRR 299

Query: 492 QPPRKR 509
            P  +R
Sbjct: 300 SPSLER 305

---

>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1211

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDER---RARDLYRGDHDRPMETRMDSDNDREKENSKGYDSE 470
           ER   D + D    RD   D R   R  D YR        +R D   DR +   +G D +
Sbjct: 48  ERRYRDRDRDSYRRRDRSVDRRDDHRDEDSYR-------SSRRDRSRDRRRSRDRGDDRD 100

Query: 471 RDKEDKEQPPRKR 509
             ++ +E+  R R
Sbjct: 101 HRRKSRERDYRSR 113

---

>POST_XENLA (P27536) Posterior protein (xPO)|
          Length = 555

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
 Frame = +3

Query: 351 EGDERRARDLYRGDHDRPMETR--MDSDNDREKENSKGYDSERDKEDKEQ---PPRK 506
           EGD +   + Y  DH  P ET   + SDN     NS G   E   E K +   PP K
Sbjct: 447 EGDAQENLNDYLLDHSPPSETETVVSSDNIDTGSNSAGDQKESQNEPKREFHTPPCK 503

---

>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = -1

Query: 339 PWNSPSHDQIPHVHHICLYHGHEVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFH 175
           P   P H   PH H     HG   + +P HG   +    H   P+   P  H FH
Sbjct: 359 PPRHPPHGPPPHGHPP---HGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGHGFH 410

---

>PHF3_HUMAN (Q92576) PHD finger protein 3|
          Length = 2039

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = +3

Query: 300  ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
            E G  D E       D   D + +RD    D         D + D+E+E SK  + E+D+
Sbjct: 1963 EEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDR 2022

Query: 480  E----DKEQPPRKRFSR 518
            +    D++   R +  R
Sbjct: 2023 DRYHKDRDHTDRTKSKR 2039

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +3

Query: 333 SMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRF 512
           S++   EG+++   D      D   E   D D+D + ++    + + D+ED E+  +KR+
Sbjct: 241 SVESSEEGEDQEHED------DGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQKRY 294

---

>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)|
          Length = 1168

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +3

Query: 393 HDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPRKRFS 515
           +  P   R D     E E  K  DS+ + ED   P   RFS
Sbjct: 630 YSSPSSPRHDGRESLESEEEKDRDSDSNSEDSVNPSSARFS 670

---

>VPS41_ARATH (P93043) Vacuolar assembly protein VPS41 homolog|
          Length = 976

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +3

Query: 402 PMETRMDSDNDREKENSKGYDSERDKEDK-----EQPPRKRFSR 518
           P E  +D D++RE+E     + E ++E++     E+ PR ++ R
Sbjct: 5   PPENGVDGDDEREEEEEDEEEEEEEEEEENGDEAEEEPRLKYQR 48

---

>BCLF1_MOUSE (Q8K019) Bcl-2-associated transcription factor 1 (Btf)|
          Length = 919

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +3

Query: 324 MDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           +D    RD E  + +  +  R D D   +  +D  +D+E    K +DSE D  ++ +  R
Sbjct: 348 LDRGNIRDKEAPKEKGSEKGRADGDWDDQEVLDYFSDKESAKQKFHDSEGDDTEETEDYR 407

Query: 504 K 506
           +
Sbjct: 408 Q 408

---

>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of|
           deformed) (52-kDa bracketing protein) (B52 protein)
          Length = 375

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQ-IGNRAV 98
           YGFV +  +R A  A+ E++GK+ +G R V
Sbjct: 38  YGFVEFEDYRDADDAVYELNGKELLGERVV 67

---

>PQBP1_MOUSE (Q91VJ5) Polyglutamine-binding protein 1 (Polyglutamine|
           tract-binding protein 1) (PQBP-1) (38 kDa nuclear
           protein containing a WW domain) (Npw38)
          Length = 263

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = +3

Query: 339 DRDHE----GDERRARDLYRGDHDRPME-TRMDSDNDREKENSKGYDSERDKEDKEQPPR 503
           DR HE      E+  R+  + D +R     ++D + DR++E  + +D    K D+E+   
Sbjct: 118 DRSHEKPDRSHEKADRNHEKNDRERERNYDKVDRERDRDRERERAFD----KADREEGKD 173

Query: 504 KRFSR 518
           +R  R
Sbjct: 174 RRHHR 178

---

>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 12  YGFVTYTQHRAAQRAILEMDGKQIGNRAVRV 104
           +GFV Y+    A  A+ EM+GK IG + + V
Sbjct: 370 FGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400

---

>CHDM_DROME (O97159) Chromodomain helicase-DNA-binding protein Mi-2 homolog (EC|
           3.6.1.-) (ATP-dependent helicase Mi-2) (dMi-2)
          Length = 1982

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +3

Query: 315 DHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           +++ ++  + + + D   A +L   D D P++   D D+D + E     DS R K+ K++
Sbjct: 6   ENDDNFQEEEEAQEDNAPAAEL-SNDSDAPLKPNNDEDDDYDPE-----DSRRKKKGKKR 59

Query: 495 PPRK 506
             RK
Sbjct: 60  KTRK 63

---

>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background protein 3)|
          Length = 674

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +3

Query: 300 ERGGFDHEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           + GG D + D   D D + D+    D    D D   +   D D+D + ++    D + D 
Sbjct: 597 DTGGKDEDNDDDDDDDDDDDDDDDDD---DDDDDDDDDDDDDDDDDDDDDDDDDDDDEDD 653

Query: 480 EDKEQ 494
           ED+++
Sbjct: 654 EDEDE 658

---

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 426 DNDREKENSKGYDSERDKEDKEQPPRKRFSR 518
           D D+EK + +  D+ R+K D+ + PR+R SR
Sbjct: 148 DEDKEKRDKEDKDN-REKRDRSRSPRRRKSR 177

---

>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162
            protein) (Centrosomin)
          Length = 1344

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 19/75 (25%)
 Frame = +3

Query: 339  DRDHEGDERRARDLYRGDHDRPMETRMDSDN----------------DREKENSKGYDSE 470
            +R H  DE R R L   D +R    R D D                 D ++ + +G D +
Sbjct: 926  ERPHRRDEDRLRRLGGDDEERESSLRPDDDRIPRRGLDDDRGPRRGPDEDRFSRRGTDDD 985

Query: 471  RD---KEDKEQPPRK 506
            R      D ++PPR+
Sbjct: 986  RPSWRNADDDRPPRR 1000

---

>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15)
           (ATP-dependent RNA helicase #46)
          Length = 795

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +3

Query: 420 DSDNDREKEN-SKGYDSERDKEDKEQPPRK 506
           D D DR++E+ SK  D ERD+ D+E+   K
Sbjct: 26  DRDRDRDREDRSKDRDRERDRGDREREREK 55



 Score = 28.9 bits (63), Expect = 8.9
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDKEDKEQ 494
           H +D   D    G +R   D    D DR  E   D   DR++E  +G D ER++E +++
Sbjct: 5   HRLDLGEDYP-SGKKRAGTDGKDRDRDRDRE---DRSKDRDRERDRG-DREREREKEKE 58

---

>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1227

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 318 HEMDYSMDRDHEGDERRARDLYRGDHDRPMETRMDSDNDREKENSKGYDSERDK 479
           H+   + DRD + D  RARD    D+ R  +  +D  +D      +  + ERD+
Sbjct: 67  HQQPRNRDRDRDRDRDRARD---RDNYRRRDRSLDRRDDNHYRGGRRDNRERDR 117

---

>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 384 RGDHDRPMETRMDSDNDR--EKENSKGYDSERDKEDKEQPPRKR 509
           R     P E   D D D+  EK+ S+  D ER+KE+K +  +++
Sbjct: 849 RNKDKAPEELSKDRDADKSVEKDKSRERDREREKENKRESRKEK 892

---

>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 32)
           (Ubiquitin-specific-processing protease 32)
           (Deubiquitinating enzyme 32) (NY-REN-60 antigen)
          Length = 1604

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -1

Query: 273 EVYRYPCHGTDLYPGDDHNSSPYPFGPSIHPFHLLQDLVGS 151
           E  +Y  +   + P    N   Y FG + HP   ++D +GS
Sbjct: 409 EYVKYDANPVVIEPSSVLNGGKYSFGTAAHPMEQVEDRIGS 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,538,158
Number of Sequences: 219361
Number of extensions: 1319996
Number of successful extensions: 7932
Number of sequences better than 10.0: 257
Number of HSP's better than 10.0 without gapping: 5058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6230
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---