ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERV2_YEAST (Q12284) FAD-linked sulfhydryl oxidase ERV2 (EC 1.8.3.-) 32 2.3
2ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disint... 31 3.0
3ERV1_YEAST (P27882) Mitochondrial FAD-linked sulfhydryl oxidase ... 31 4.0
4PYRF_PASMU (Q9CMM1) Orotidine 5'-phosphate decarboxylase (EC 4.1... 30 8.8

>ERV2_YEAST (Q12284) FAD-linked sulfhydryl oxidase ERV2 (EC 1.8.3.-)|
          Length = 196

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 15  CRKHFYDMCSSVSVPFKSARDLSLWLWSTHNKVNERLMKEEKDMGT 152
           C  HF  +     V   S    ++W    HNKVNE L K+  D  T
Sbjct: 124 CSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCAT 169



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>ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 19)
           (ADAM-TS 19) (ADAM-TS19)
          Length = 1210

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 471 SGEPSRRTESKERTGTEKQP-TGCSPSTSSEVPPREFIFPGMG 596
           +GE +RRT + E    E  P + CS S SS V  RE   PG+G
Sbjct: 625 AGECTRRTPAPEHLAGEWSPWSSCSRSCSSGVSSRERKCPGLG 667



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>ERV1_YEAST (P27882) Mitochondrial FAD-linked sulfhydryl oxidase ERV1 (EC|
           1.8.3.-) (14 kDa regulatory protein) (Essential for
           respiration and vegetative growth protein 1)
          Length = 189

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 15  CRKHFYDMCSSVSVPFKSARDLSLWLWSTHNKVNERLMKEEKD 143
           C K F       +   +S  +L  W+   HNKVN++L K + D
Sbjct: 133 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFD 175



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>PYRF_PASMU (Q9CMM1) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 233

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 27  FYDMCSSVSVPFKSARDLSLWLWSTHNKVNERLMKEEK 140
           F+D+ ++V+   +SA DL +W+   H     R+M+E K
Sbjct: 62  FHDIPNTVARAVRSAADLGVWMVDLHASGGLRMMEEAK 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,083,520
Number of Sequences: 219361
Number of extensions: 1990171
Number of successful extensions: 4655
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4655
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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