| Clone Name | bags15h13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence Length = 1732 Score = 422 bits (213), Expect = e-115 Identities = 525/629 (83%) Strand = Plus / Plus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| || |||||| | ||||||||||||||||| || || ||||| |||||||| Sbjct: 430 accaaggtcatccctggcaaccttgggtttgttgcacaactcaatgaagggcgccacctt 489 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || ||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 490 aagaagcgccctactgagtttcgtgtggaccgtgtgctccagccatttgaccctgccaag 549 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtggc 215 ||||| |||||||| ||||||||||| |||||||| || | ||||||||||||| ||| Sbjct: 550 ttcaatttcaccaaagttggccaggaagaggttcttttccaatttgagaatggtgatggt 609 Query: 216 gacagcagctatttccttgaaaatgccccaagcattgagggtgaccgtgctcccagcgtt 275 || |||||||||||| | | || |||| ||||| | ||| |||||||| | ||| Sbjct: 610 gatgacagctatttcctgaatgacgctccaatcattgctgttgatcgtgctccaaatgtt 669 Query: 276 gttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtcctt 335 ||||| |||||||||||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 670 gttgctatcaatgtgagcccaattgaatatggacatgtgcttctcattcctcgtgttctg 729 Query: 336 gaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggcagct 395 ||||||||||||||| | |||||||| || || ||| |||||||||| || ||||||||| Sbjct: 730 gaccgcctgcctcagaagattgatccagagagtttcttgcttgcactgcaaatggcagct 789 Query: 396 gaggctgcaagcccatactttaggcttggttacaacagcttgggtgcctttgccaccatc 455 ||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 790 gaggcagctagcccatacttcaggcttggttacaatagcttgggtgcctttgccaccatc 849 Query: 456 aatcatctccacttccaggcatactacctgtcagtaccttttcctgttgagaaggcgcct 515 ||||| |||||||| |||||||||||| ||||||| ||||| |||||||| ||||| || Sbjct: 850 aatcacctccactttcaggcatactacttgtcagtgcctttccctgttgaaaaggcagct 909 Query: 516 accaagaagatcccccttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaactg 575 ||| | |||||||| ||| | || | |||| | |||||||| ||||| || ||| Sbjct: 910 acccacaagatccctctttctgaggacacaatgaagaatggagtgaccgtgtccaagctg 969 Query: 576 acaaatttccccgtgagaggtctagtgtttgagagagggaacacactgaaggatttggct 635 | ||||| || |||||||| || || |||||| |||||||||||||| | || |||| Sbjct: 970 ataaattatcctgtgagaggcctggtatttgagggagggaacacactggacgacctggca 1029 Query: 636 gatgtggttaccaacgcttgcatttggct 664 |||||||| |||| |||||||||||||| Sbjct: 1030 aatgtggtttccaatgcttgcatttggct 1058
>gb|AY105327.1| Zea mays PCO147247 mRNA sequence Length = 1954 Score = 345 bits (174), Expect = 1e-91 Identities = 414/494 (83%) Strand = Plus / Plus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| ||||||||| | ||||||||||||||||| || || ||||| ||||| || Sbjct: 688 accaaggtcattcctggcaaccttgggtttgttgcacaactcaatgaagggcgccatctt 747 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || ||||| ||||| ||||||||||||||||| || || ||||||| Sbjct: 748 aagaagcgccctactgagtttcgtgtggaccgtgtgctccagccgtttgaccctgccaaa 807 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtggc 215 ||||| ||||| || ||||||||||| ||||||||||| | ||||||||| ||||||| Sbjct: 808 ttcaatttcacaaaagttggccaggaagaggttctcttccaatttgagaatagtggtggt 867 Query: 216 gacagcagctatttccttgaaaatgccccaagcattgagggtgaccgtgctcccagcgtt 275 || |||||||||||| | || || |||| ||||| | ||| || ||||| | ||| Sbjct: 868 gatgacagctatttcctgaacaacgctccaatcattgctgttgatcgggctccaaatgtt 927 Query: 276 gttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtcctt 335 |||| |||||||| ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 928 attgctatcaatgtaagcccaattgaatatggacatgtgcttctcattcctcgtgttctg 987 Query: 336 gaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggcagct 395 ||||||||||||||| |||||||| || |||||| |||||||||| || |||||||| Sbjct: 988 gaccgcctgcctcagaggattgatccagagagcttcttgcttgcactgcaaatggcagcc 1047 Query: 396 gaggctgcaagcccatactttaggcttggttacaacagcttgggtgcctttgccaccatc 455 |||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 1048 gagggaggtagcccatacttcaggcttggttacaatagcttgggtgcgtttgccaccatc 1107 Query: 456 aatcatctccacttccaggcatactacctgtcagtaccttttcctgttgagaaggcgcct 515 ||||| |||||||| ||||| |||||| ||||||| ||||| |||||||||||||| || Sbjct: 1108 aatcacctccactttcaggcgtactacttgtcagtgcctttccctgttgagaaggcagct 1167 Query: 516 accaagaagatccc 529 ||| | |||||||| Sbjct: 1168 acccacaagatccc 1181
>dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M14, full insert sequence Length = 2088 Score = 214 bits (108), Expect = 3e-52 Identities = 321/392 (81%) Strand = Plus / Plus Query: 273 gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtc 332 ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||| ||||| Sbjct: 964 gttgttgcaatcaatgtaagcccaattgaatatggccatgttcttctcattccccgtgta 1023 Query: 333 cttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggca 392 || ||||||||||||||| ||||| | || |||||| |||||||||| |||||||| Sbjct: 1024 ctggaccgcctgcctcagaggattgaccaggagagcttcttgcttgcactgcacatggct 1083 Query: 393 gctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcctttgccacc 452 ||||| || |||||||||||||| |||||||| || || || |||||||||||||| ||| Sbjct: 1084 gctgaagccgcaagcccatacttcaggcttggctataatagtttgggtgcctttgcaacc 1143 Query: 453 atcaatcatctccacttccaggcatactacctgtcagtaccttttcctgttgagaaggcg 512 ||||| || |||||||| |||||||||||| || |||| ||||| |||||||||||||| Sbjct: 1144 atcaaccacctccactttcaggcatactacttgacagtgcctttccctgttgagaaggca 1203 Query: 513 cctaccaagaagatcccccttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaa 572 ||||||||| ||| |||||| || | | ||||||||||||| |||||||| || Sbjct: 1204 gctaccaagaggattttccttgctgagggcacaatgaatagtggagtaaaggtgtccaag 1263 Query: 573 ctgacaaatttccccgtgagaggtctagtgtttgagagagggaacacactgaaggatttg 632 |||| || | ||| ||||| || || || |||||| |||| ||| |||||| ||| || Sbjct: 1264 ctgatgaactaccctgtgaggggactggtttttgagggaggcaactcactgagcgatctg 1323 Query: 633 gctgatgtggttaccaacgcttgcatttggct 664 || |||||||| ||| |||||| || ||||| Sbjct: 1324 gccaatgtggtttccagcgcttgtatctggct 1355 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||| Sbjct: 727 accaaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctc 786 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||| Sbjct: 787 aagaagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaag 846 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 214 |||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 847 ttcaacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 905
>dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G08, full insert sequence Length = 1295 Score = 214 bits (108), Expect = 3e-52 Identities = 321/392 (81%) Strand = Plus / Plus Query: 273 gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtc 332 ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||| ||||| Sbjct: 206 gttgttgcaatcaatgtaagcccaattgaatatggccatgttcttctcattccccgtgta 265 Query: 333 cttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggca 392 || ||||||||||||||| ||||| | || |||||| |||||||||| |||||||| Sbjct: 266 ctggaccgcctgcctcagaggattgaccaggagagcttcttgcttgcactgcacatggct 325 Query: 393 gctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcctttgccacc 452 ||||| || |||||||||||||| |||||||| || || || |||||||||||||| ||| Sbjct: 326 gctgaagccgcaagcccatacttcaggcttggctataatagtttgggtgcctttgcaacc 385 Query: 453 atcaatcatctccacttccaggcatactacctgtcagtaccttttcctgttgagaaggcg 512 ||||| || |||||||| |||||||||||| || |||| ||||| |||||||||||||| Sbjct: 386 atcaaccacctccactttcaggcatactacttgacagtgcctttccctgttgagaaggca 445 Query: 513 cctaccaagaagatcccccttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaa 572 ||||||||| ||| |||||| || | | ||||||||||||| |||||||| || Sbjct: 446 gctaccaagaggattttccttgctgagggcacaatgaatagtggagtaaaggtgtccaag 505 Query: 573 ctgacaaatttccccgtgagaggtctagtgtttgagagagggaacacactgaaggatttg 632 |||| || | ||| ||||| || || || |||||| |||| ||| |||||| ||| || Sbjct: 506 ctgatgaactaccctgtgaggggactggtttttgagggaggcaactcactgagcgatctg 565 Query: 633 gctgatgtggttaccaacgcttgcatttggct 664 || |||||||| ||| |||||| || ||||| Sbjct: 566 gccaatgtggtttccagcgcttgtatctggct 597 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 81 gaaggccgccacctcaagaagcgcccaaccgagttccgtgttgaccgtgtgctccagcca 140 ||||| |||||||||||||||||||| || || ||||| || ||||||||||| || ||| Sbjct: 14 gaaggacgccacctcaagaagcgccctactgaattccgcgtggaccgtgtgcttcaacca 73 Query: 141 ttcgattctgccaagttcaacttcaccaaggttggccaggaggaggttctctttcgcttt 200 || ||| |||||||||||||||||||||| ||||||||||||||||| ||||| | ||| Sbjct: 74 tttgatgctgccaagttcaacttcaccaaagttggccaggaggaggtgctcttccaattt 133 Query: 201 gagaatggtggtgg 214 |||||||||||||| Sbjct: 134 gagaatggtggtgg 147
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Minus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||| Sbjct: 4534192 accaaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctc 4534133 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||| Sbjct: 4534132 aagaagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaag 4534073 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 214 |||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 4534072 ttcaacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 4534014 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 291 agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 350 ||||| ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 4533852 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 4533793 Query: 351 caaattgatcctgaaagcttcctgcttgcactacacatggcagctgaggctgcaagccca 410 ||||| | || |||||| |||||||||| |||||||| ||||| || ||||||||| Sbjct: 4533792 aggattgaccaggagagcttcttgcttgcactgcacatggctgctgaagccgcaagccca 4533733 Query: 411 tactttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttc 470 ||||| |||||||| || || || |||||||||||||| |||||||| || |||||||| Sbjct: 4533732 tacttcaggcttggctataatagtttgggtgcctttgcaaccatcaaccacctccacttt 4533673 Query: 471 cagg 474 |||| Sbjct: 4533672 cagg 4533669 Score = 60.0 bits (30), Expect = 1e-05 Identities = 153/194 (78%) Strand = Plus / Minus Query: 471 caggcatactacctgtcagtaccttttcctgttgagaaggcgcctaccaagaagatcccc 530 |||||||||||| || |||| ||||| |||||||||||||| ||||||||| ||| | Sbjct: 4533238 caggcatactacttgacagtgcctttccctgttgagaaggcagctaccaagaggattttc 4533179 Query: 531 cttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaactgacaaatttccccgtg 590 ||||| || | | ||||||||||||| |||||||| || |||| || | ||| ||| Sbjct: 4533178 cttgctgagggcacaatgaatagtggagtaaaggtgtccaagctgatgaactaccctgtg 4533119 Query: 591 agaggtctagtgtttgagagagggaacacactgaaggatttggctgatgtggttaccaac 650 || || || || |||||| |||| ||| |||||| ||| |||| |||||||| ||| | Sbjct: 4533118 aggggactggtttttgagggaggcaactcactgagcgatctggccaatgtggtttccagc 4533059 Query: 651 gcttgcatttggct 664 ||||| || ||||| Sbjct: 4533058 gcttgtatctggct 4533045
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Minus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||| Sbjct: 4534173 accaaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctc 4534114 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||| Sbjct: 4534113 aagaagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaag 4534054 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 214 |||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 4534053 ttcaacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 4533995 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 291 agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 350 ||||| ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 4533833 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 4533774 Query: 351 caaattgatcctgaaagcttcctgcttgcactacacatggcagctgaggctgcaagccca 410 ||||| | || |||||| |||||||||| |||||||| ||||| || ||||||||| Sbjct: 4533773 aggattgaccaggagagcttcttgcttgcactgcacatggctgctgaagccgcaagccca 4533714 Query: 411 tactttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttc 470 ||||| |||||||| || || || |||||||||||||| |||||||| || |||||||| Sbjct: 4533713 tacttcaggcttggctataatagtttgggtgcctttgcaaccatcaaccacctccacttt 4533654 Query: 471 cagg 474 |||| Sbjct: 4533653 cagg 4533650 Score = 60.0 bits (30), Expect = 1e-05 Identities = 153/194 (78%) Strand = Plus / Minus Query: 471 caggcatactacctgtcagtaccttttcctgttgagaaggcgcctaccaagaagatcccc 530 |||||||||||| || |||| ||||| |||||||||||||| ||||||||| ||| | Sbjct: 4533219 caggcatactacttgacagtgcctttccctgttgagaaggcagctaccaagaggattttc 4533160 Query: 531 cttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaactgacaaatttccccgtg 590 ||||| || | | ||||||||||||| |||||||| || |||| || | ||| ||| Sbjct: 4533159 cttgctgagggcacaatgaatagtggagtaaaggtgtccaagctgatgaactaccctgtg 4533100 Query: 591 agaggtctagtgtttgagagagggaacacactgaaggatttggctgatgtggttaccaac 650 || || || || |||||| |||| ||| |||||| ||| |||| |||||||| ||| | Sbjct: 4533099 aggggactggtttttgagggaggcaactcactgagcgatctggccaatgtggtttccagc 4533040 Query: 651 gcttgcatttggct 664 ||||| || ||||| Sbjct: 4533039 gcttgtatctggct 4533026
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 172 bits (87), Expect = 9e-40 Identities = 156/179 (87%) Strand = Plus / Plus Query: 36 accaaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctc 95 |||||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||| Sbjct: 70586 accaaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctc 70645 Query: 96 aagaagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaag 155 ||||||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||| Sbjct: 70646 aagaagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaag 70705 Query: 156 ttcaacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 214 |||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 70706 ttcaacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 70764 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Plus Query: 291 agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 350 ||||| ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 70926 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 70985 Query: 351 caaattgatcctgaaagcttcctgcttgcactacacatggcagctgaggctgcaagccca 410 ||||| | || |||||| |||||||||| |||||||| ||||| || ||||||||| Sbjct: 70986 aggattgaccaggagagcttcttgcttgcactgcacatggctgctgaagccgcaagccca 71045 Query: 411 tactttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttc 470 ||||| |||||||| || || || |||||||||||||| |||||||| || |||||||| Sbjct: 71046 tacttcaggcttggctataatagtttgggtgcctttgcaaccatcaaccacctccacttt 71105 Query: 471 cagg 474 |||| Sbjct: 71106 cagg 71109 Score = 60.0 bits (30), Expect = 1e-05 Identities = 153/194 (78%) Strand = Plus / Plus Query: 471 caggcatactacctgtcagtaccttttcctgttgagaaggcgcctaccaagaagatcccc 530 |||||||||||| || |||| ||||| |||||||||||||| ||||||||| ||| | Sbjct: 71540 caggcatactacttgacagtgcctttccctgttgagaaggcagctaccaagaggattttc 71599 Query: 531 cttgccaagtgtgcgctgaatagtggagtgaaggtgtcaaaactgacaaatttccccgtg 590 ||||| || | | ||||||||||||| |||||||| || |||| || | ||| ||| Sbjct: 71600 cttgctgagggcacaatgaatagtggagtaaaggtgtccaagctgatgaactaccctgtg 71659 Query: 591 agaggtctagtgtttgagagagggaacacactgaaggatttggctgatgtggttaccaac 650 || || || || |||||| |||| ||| |||||| ||| |||| |||||||| ||| | Sbjct: 71660 aggggactggtttttgagggaggcaactcactgagcgatctggccaatgtggtttccagc 71719 Query: 651 gcttgcatttggct 664 ||||| || ||||| Sbjct: 71720 gcttgtatctggct 71733
>ref|NM_118819.2| Arabidopsis thaliana VTC2 (VITAMIN C DEFECTIVE 2) AT4G26850 (VTC2) mRNA, complete cds Length = 2084 Score = 125 bits (63), Expect = 2e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 ||||||| |||||||| |||||||| || || || ||||| || |||||||| || |||| Sbjct: 1015 ctcccagtgttgttgccatcaatgttagtccgatagagtatggccatgtgctgctgattc 1074 Query: 325 cacgtgtccttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactac 384 | ||||| |||||| || ||||||| || |||| ||||| | |||||||| | | Sbjct: 1075 ctcgtgttcttgactgcttgcctcaaaggatcgatcacaaaagccttttgcttgcagttc 1134 Query: 385 acatggcagctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcct 444 ||||||| ||||||||||| | |||||||| || || |||||||||||||||||||| | Sbjct: 1135 acatggctgctgaggctgctaatccatacttcagactcggttacaacagcttgggtgctt 1194 Query: 445 ttgccaccatcaatcatctccacttccaggc 475 ||||||| ||||||||||||||||| ||||| Sbjct: 1195 ttgccactatcaatcatctccactttcaggc 1225 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 819 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 874
>gb|AY056134.1| Arabidopsis thaliana unknown protein (At4g26850) mRNA, complete cds Length = 2097 Score = 125 bits (63), Expect = 2e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 ||||||| |||||||| |||||||| || || || ||||| || |||||||| || |||| Sbjct: 1013 ctcccagtgttgttgccatcaatgttagtccgatagagtatggccatgtgctgctgattc 1072 Query: 325 cacgtgtccttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactac 384 | ||||| |||||| || ||||||| || |||| ||||| | |||||||| | | Sbjct: 1073 ctcgtgttcttgactgcttgcctcaaaggatcgatcacaaaagccttttgcttgcagttc 1132 Query: 385 acatggcagctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcct 444 ||||||| ||||||||||| | |||||||| || || |||||||||||||||||||| | Sbjct: 1133 acatggctgctgaggctgctaatccatacttcagactcggttacaacagcttgggtgctt 1192 Query: 445 ttgccaccatcaatcatctccacttccaggc 475 ||||||| ||||||||||||||||| ||||| Sbjct: 1193 ttgccactatcaatcatctccactttcaggc 1223 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 817 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 872
>gb|AY093138.1| Arabidopsis thaliana putative protein (At4g26850) mRNA, complete cds Length = 2045 Score = 125 bits (63), Expect = 2e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 ||||||| |||||||| |||||||| || || || ||||| || |||||||| || |||| Sbjct: 1013 ctcccagtgttgttgccatcaatgttagtccgatagagtatggccatgtgctgctgattc 1072 Query: 325 cacgtgtccttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactac 384 | ||||| |||||| || ||||||| || |||| ||||| | |||||||| | | Sbjct: 1073 ctcgtgttcttgactgcttgcctcaaaggatcgatcacaaaagccttttgcttgcagttc 1132 Query: 385 acatggcagctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcct 444 ||||||| ||||||||||| | |||||||| || || |||||||||||||||||||| | Sbjct: 1133 acatggctgctgaggctgctaatccatacttcagactcggttacaacagcttgggtgctt 1192 Query: 445 ttgccaccatcaatcatctccacttccaggc 475 ||||||| ||||||||||||||||| ||||| Sbjct: 1193 ttgccactatcaatcatctccactttcaggc 1223 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 817 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 872
>gb|BT006589.1| Arabidopsis thaliana At4g26850 mRNA, complete cds Length = 1329 Score = 125 bits (63), Expect = 2e-25 Identities = 174/211 (82%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 ||||||| |||||||| |||||||| || || || ||||| || |||||||| || |||| Sbjct: 512 ctcccagtgttgttgccatcaatgttagtccgatagagtatggccatgtgctgctgattc 571 Query: 325 cacgtgtccttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactac 384 | ||||| |||||| || ||||||| || |||| ||||| | |||||||| | | Sbjct: 572 ctcgtgttcttgactgcttgcctcaaaggatcgatcacaaaagccttttgcttgcagttc 631 Query: 385 acatggcagctgaggctgcaagcccatactttaggcttggttacaacagcttgggtgcct 444 ||||||| ||||||||||| | |||||||| || || |||||||||||||||||||| | Sbjct: 632 acatggctgctgaggctgctaatccatacttcagactcggttacaacagcttgggtgctt 691 Query: 445 ttgccaccatcaatcatctccacttccaggc 475 ||||||| ||||||||||||||||| ||||| Sbjct: 692 ttgccactatcaatcatctccactttcaggc 722 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 316 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 371
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 373 tgcttgcactacacatggcagctgaggctgcaagcccatactttaggcttggttacaaca 432 |||||||| | |||||||| ||||||||||| | |||||||| || || |||||||||| Sbjct: 4004 tgcttgcagttcacatggctgctgaggctgctaatccatacttcagactcggttacaaca 3945 Query: 433 gcttgggtgcctttgccaccatcaatcatctccacttccagg 474 |||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 3944 gcttgggtgcttttgccactatcaatcatctccactttcagg 3903 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 4402 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 4347
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 373 tgcttgcactacacatggcagctgaggctgcaagcccatactttaggcttggttacaaca 432 |||||||| | |||||||| ||||||||||| | |||||||| || || |||||||||| Sbjct: 197324 tgcttgcagttcacatggctgctgaggctgctaatccatacttcagactcggttacaaca 197265 Query: 433 gcttgggtgcctttgccaccatcaatcatctccacttccagg 474 |||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 197264 gcttgggtgcttttgccactatcaatcatctccactttcagg 197223 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 197722 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 197667
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 373 tgcttgcactacacatggcagctgaggctgcaagcccatactttaggcttggttacaaca 432 |||||||| | |||||||| ||||||||||| | |||||||| || || |||||||||| Sbjct: 48161 tgcttgcagttcacatggctgctgaggctgctaatccatacttcagactcggttacaaca 48102 Query: 433 gcttgggtgcctttgccaccatcaatcatctccacttccagg 474 |||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 48101 gcttgggtgcttttgccactatcaatcatctccactttcagg 48060 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 48559 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 48504
>gb|AF508793.1| Arabidopsis thaliana VTC2 (VTC2) gene, complete cds Length = 1884 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 373 tgcttgcactacacatggcagctgaggctgcaagcccatactttaggcttggttacaaca 432 |||||||| | |||||||| ||||||||||| | |||||||| || || | |||||||| Sbjct: 997 tgcttgcagttcacatggctgctgaggctgctaatccatacttcagactcgattacaaca 1056 Query: 433 gcttgggtgcctttgccaccatcaatcatctccacttccagg 474 |||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 1057 gcttgggtgcttttgccactatcaatcatctccactttcagg 1098 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 66 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 121 ||||| ||||||||||| || || ||| | |||||| | ||||| ||||||||||| Sbjct: 599 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 654
>emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o19, COMPLETE SEQUENCE Length = 132030 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 354 attgatcctgaaagcttcctgcttgcactacacatggcagctgaggctgcaagcccatac 413 ||||||| ||| |||||| |||||||||| |||||||||||||| ||||| | ||||| Sbjct: 102197 attgatcatgagagcttcttgcttgcacttcacatggcagctgaagctgctaatccatat 102256 Query: 414 tttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccag 473 ||| | | |||||||||||| | ||||| ||||| || || || ||||| ||||||||| Sbjct: 102257 tttcgattgggttacaacagccttggtgcatttgcaactataaaccatcttcacttccag 102316 Query: 474 g 474 | Sbjct: 102317 g 102317 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 67 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttc 116 |||| ||||||||||| ||||| |||||||||||| | ||||| |||||| Sbjct: 101810 ttgctcagcttaacgagggccgacacctcaagaagagaccaactgagttc 101859
>gb|AY570979.1| Xerophyta humilis clone HC437 unknown mRNA Length = 1266 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 405 agcccatactttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctc 464 ||||||||||| ||||| ||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 371 agcccatacttcaggctaggttacaacagtcttggtgcttttgccaccattaatcatctt 430 Query: 465 cacttccaggc 475 || |||||||| Sbjct: 431 catttccaggc 441 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 152 caagttcaacttcaccaaggttggccaggaggaggttctctttcgctt 199 ||||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct: 121 caagttcaatttcaccaaggtcgggcaggaggaggttctcttccgctt 168 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 273 gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgt 331 |||||||||||||| |||||||| || ||||| || ||||| || || ||||| ||||| Sbjct: 239 gttgttgcaatcaacgtgagcccaatcgagtatggccatgtcctgcttattccccgtgt 297
>gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence Length = 2013 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 413 ctttaggcttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttcca 472 ||||||| | ||||| ||||| ||||| || ||||| ||||| || || ||||||||||| Sbjct: 1086 ctttagggtaggttataacagtttgggcgcttttgctaccattaaccacctccacttcca 1145 Query: 473 ggcatactacctgtcagtaccttttcctgttgagaa 508 ||| || ||| ||||||| || ||||| |||||||| Sbjct: 1146 ggcgtattacttgtcagtgccatttccagttgagaa 1181 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 274 ttgttgcaatcaatgtgagccctattgagta 304 ||||||| |||||||||||||| |||||||| Sbjct: 947 ttgttgctatcaatgtgagcccaattgagta 977 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 cgccacctcaagaagcgcccaaccgagtt 115 |||||||| |||||||||||||| ||||| Sbjct: 763 cgccacctaaagaagcgcccaacagagtt 791
>ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 mRNA, complete cds Length = 1874 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 923 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 982 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 983 ctcgtgttcttga 995 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 67 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 125 |||| ||||| || ||||| || || ||||||||| | ||||||||||||||||||||| Sbjct: 719 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 777
>ref|NM_190314.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1059 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccaggcatact 480 ||||||||||||| |||||| || || || ||||||||||||||||||||||| |||| Sbjct: 473 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccaggcgtact 532 Query: 481 a 481 | Sbjct: 533 a 533
>gb|BT016612.1| Zea mays clone Contig445 mRNA sequence Length = 1419 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccaggcatact 480 ||||||| |||||| |||| | |||||| || ||||| || || |||||||||||||||| Sbjct: 680 ttggttataacagcctgggcggctttgcaactatcaaccaccttcacttccaggcatact 739 Query: 481 acctg 485 ||||| Sbjct: 740 acctg 744
>gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds Length = 1327 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 503 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 562 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 563 ctcgtgttcttga 575 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 67 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 125 |||| ||||| || ||||| || || ||||||||| | ||||||||||||||||||||| Sbjct: 299 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 357
>gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds Length = 1788 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 819 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 878 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 879 ctcgtgttcttga 891 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 67 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 125 |||| ||||| || ||||| || || ||||||||| | ||||||||||||||||||||| Sbjct: 615 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 673
>emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1806 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 857 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 916 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 917 ctcgtgttcttga 929 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 93 ctcaagaagcgcccaaccgagttccgtgttgac 125 ||||||||| | ||||||||||||||||||||| Sbjct: 680 ctcaagaagagaccaaccgagttccgtgttgac 712
>emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1694 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 808 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 867 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 868 ctcgtgttcttga 880 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 93 ctcaagaagcgcccaaccgagttccgtgttgac 125 ||||||||| | ||||||||||||||||||||| Sbjct: 630 ctcaagaagagaccaaccgagttccgtgttgac 662
>emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1838 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 923 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 982 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 983 ctcgtgttcttga 995 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 93 ctcaagaagcgcccaaccgagttccgtgttgac 125 ||||||||| | ||||||||||||||||||||| Sbjct: 745 ctcaagaagagaccaaccgagttccgtgttgac 777
>emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1692 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 783 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 842 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 843 ctcgtgttcttga 855 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 93 ctcaagaagcgcccaaccgagttccgtgttgac 125 ||||||||| | ||||||||||||||||||||| Sbjct: 605 ctcaagaagagaccaaccgagttccgtgttgac 637
>emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1684 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 265 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 324 |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || |||| Sbjct: 771 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 830 Query: 325 cacgtgtccttga 337 | ||||| ||||| Sbjct: 831 ctcgtgttcttga 843 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 95 caagaagcgcccaaccgagttccgtgttgac 125 ||||||| | ||||||||||||||||||||| Sbjct: 595 caagaagagaccaaccgagttccgtgttgac 625
>dbj|AK111215.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B04, full insert sequence Length = 2890 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Plus Query: 63 tttgttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgtt 122 ||||| |||||||| ||||| |||||| || |||||||||||| || ||||||||||| Sbjct: 180 tttgtggcacagctgaacgagggccgctacagcaagaagcgccccacagagttccgtgtg 239 Query: 123 gaccgtgtgctccagccattcgattctgccaagttcaacttcaccaagg 171 |||| ||| | ||| | ||||| | |||||||||||||||||||| Sbjct: 240 gaccaggtggtgcaggccttcgaccccaacaagttcaacttcaccaagg 288
>dbj|AK100274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072P03, full insert sequence Length = 2135 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccaggcatact 480 ||||||||||||| |||||| || || || ||||||||||||||||||||||| |||| Sbjct: 1458 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccaggcgtact 1517 Query: 481 a 481 | Sbjct: 1518 a 1518
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 67 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 125 |||| ||||| || ||||| || || ||||||||| | ||||||||||||||||||||| Sbjct: 29107 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 29165
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccagg 474 ||||||||||||| |||||| || || || |||||||||||||||||||||| Sbjct: 41227 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccagg 41280
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccagg 474 ||||||||||||| |||||| || || || |||||||||||||||||||||| Sbjct: 39239521 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccagg 39239574
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccagg 474 ||||||||||||| |||||| || || || |||||||||||||||||||||| Sbjct: 115281 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccagg 115334
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 421 ttggttacaacagcttgggtgcctttgccaccatcaatcatctccacttccagg 474 ||||||||||||| |||||| || || || |||||||||||||||||||||| Sbjct: 20767 ttggttacaacagtctgggtggtttcgcaactatcaatcatctccacttccagg 20820
>gb|AY489190.1| Capsicum annuum putative At4g26850-like protein mRNA, complete sequence Length = 589 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 152 caagttcaacttcaccaaggttggccaggaggaggttctctttc 195 ||||||||||||||| |||||||| ||||| ||| | ||||||| Sbjct: 524 caagttcaacttcactaaggttggacaggaagagttgctctttc 567
>emb|BX294151.1| Pirellula sp. strain 1 complete genome; segment 19/24 Length = 295650 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 433 gcttgggtgcctttgccaccatc 455 ||||||||||||||||||||||| Sbjct: 43619 gcttgggtgcctttgccaccatc 43641
>gb|AE009937.1|AE009937 Pyrobaculum aerophilum strain IM2 section 192 of 201 of the complete genome Length = 11207 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 aagcccatactttaggcttggtt 426 ||||||||||||||||||||||| Sbjct: 2161 aagcccatactttaggcttggtt 2183
>ref|XM_676408.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8231.2), mRNA Length = 915 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tgggtgcctttgccaccatca 456 ||||||||||||||||||||| Sbjct: 536 tgggtgcctttgccaccatca 516
>gb|AC150683.3| Mus musculus BAC clone RP23-435E16 from chromosome 7, complete sequence Length = 198646 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 tggccaggaggaggttctctt 193 ||||||||||||||||||||| Sbjct: 158745 tggccaggaggaggttctctt 158765
>gb|AC151729.6| Mus musculus BAC clone RP24-74F2 from chromosome 9, complete sequence Length = 224139 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 438 ggtgcctttgccaccatcaatcatc 462 |||||||| |||||||||||||||| Sbjct: 119319 ggtgccttagccaccatcaatcatc 119343
>gb|AF153765.1|AF153765 Emericella nidulans S-adenosylmethionine decarboxylase mRNA, partial cds Length = 1086 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tgggtgcctttgccaccatca 456 ||||||||||||||||||||| Sbjct: 542 tgggtgcctttgccaccatca 522
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 ggtgaccgtgctcccagcgtt 275 ||||||||||||||||||||| Sbjct: 2549882 ggtgaccgtgctcccagcgtt 2549862
>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence Length = 198860 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 tggccaggaggaggttctctt 193 ||||||||||||||||||||| Sbjct: 186600 tggccaggaggaggttctctt 186580
>gb|BC064388.1| Homo sapiens lactate dehydrogenase C, transcript variant 1, mRNA (cDNA clone MGC:74967 IMAGE:5744600), complete cds Length = 1331 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 255 actgaaggatttggctgatg 274
>ref|NM_017448.1| Homo sapiens lactate dehydrogenase C (LDHC), transcript variant 2, mRNA Length = 1171 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 178 actgaaggatttggctgatg 197
>ref|NM_002301.2| Homo sapiens lactate dehydrogenase C (LDHC), transcript variant 1, mRNA Length = 1278 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 285 actgaaggatttggctgatg 304
>gb|AC009055.10| Homo sapiens chromosome 16 clone RP11-256I9, complete sequence Length = 170831 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ccttttcctgttgagaaggc 511 |||||||||||||||||||| Sbjct: 132174 ccttttcctgttgagaaggc 132193
>gb|AC140109.4| Mus musculus BAC clone RP24-156A17 from chromosome 3, complete sequence Length = 130716 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttaggcttggttacaacagc 434 |||||||||||||||||||| Sbjct: 110398 ttaggcttggttacaacagc 110379
>gb|AC134434.4| Mus musculus BAC clone RP24-420E8 from chromosome 7, complete sequence Length = 214856 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 gaggtctagtgtttgagaga 611 |||||||||||||||||||| Sbjct: 123037 gaggtctagtgtttgagaga 123018
>ref|XM_845849.1| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing 11 isoform 3, transcript variant 2 (LOC481292), mRNA Length = 3430 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tgttgaccgtgtgctccagc 138 |||||||||||||||||||| Sbjct: 1075 tgttgaccgtgtgctccagc 1056
>gb|U41107.1| Caenorhabditis elegans cosmid F55C12, complete sequence Length = 39086 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 catgtgcttctcattccacg 328 |||||||||||||||||||| Sbjct: 20793 catgtgcttctcattccacg 20812
>gb|BC019249.2| Homo sapiens lactate dehydrogenase C, mRNA (cDNA clone IMAGE:4839028), partial cds Length = 1245 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 239 actgaaggatttggctgatg 258
>emb|AL355315.18| Human DNA sequence from clone RP11-548K23 on chromosome 10 Contains the ANKRD2 gene for ankyrin repeat domain 2 (stretch responsive muscle), six novel genes, the gene for phosphatidylinositol 4-kinase type II (PI4KII) and four CpG islands, complete sequence Length = 157193 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 caccaaggttggccaggagg 183 |||||||||||||||||||| Sbjct: 132404 caccaaggttggccaggagg 132423
>gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, complete sequence Length = 173716 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagtacggtcatgtgcttct 319 |||||||||||||||||||| Sbjct: 155346 gagtacggtcatgtgcttct 155365
>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains part of the gene for smooth muscle cell associated protein 2 (SMAP2) or secreted modular calcium binding protein 2 (SMOC2) and two CpG islands, complete sequence Length = 110603 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 tgtcagtaccttttcctgtt 503 |||||||||||||||||||| Sbjct: 69704 tgtcagtaccttttcctgtt 69723
>gb|AC164299.2| Mus musculus BAC clone RP23-313K8 from chromosome 1, complete sequence Length = 160562 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctttgccaccatcaatcatc 462 |||||||||||||||||||| Sbjct: 32059 ctttgccaccatcaatcatc 32078
>emb|BX294142.1| Pirellula sp. strain 1 complete genome; segment 10/24 Length = 294050 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gaacacactgaaggatttggctga 637 |||||| ||||||||||||||||| Sbjct: 177692 gaacacgctgaaggatttggctga 177715
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11 Length = 302050 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcagcaaattgatcctgaaa 366 |||||||||||||||||||| Sbjct: 197316 tcagcaaattgatcctgaaa 197297
>gb|AY286300.1| Homo sapiens lactate dehydrogenase C (LDHC) mRNA, complete cds; alternatively spliced Length = 1216 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 208 actgaaggatttggctgatg 227
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11, complete sequence Length = 133334 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agcagctatttccttgaaaa 238 |||||||||||||||||||| Sbjct: 42382 agcagctatttccttgaaaa 42401
>emb|AL662836.7| Mouse DNA sequence from clone RP23-313L19 on chromosome 11, complete sequence Length = 120749 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccaggaggaggttctctttc 195 |||||||||||||||||||| Sbjct: 60215 ccaggaggaggttctctttc 60196
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tcaatcatctccacttccag 473 |||||||||||||||||||| Sbjct: 62171 tcaatcatctccacttccag 62152
>ref|XM_936572.1| PREDICTED: Homo sapiens suppressor of cytokine signaling 7 (SOCS7), mRNA Length = 1725 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagtacggtcatgtgcttct 319 |||||||||||||||||||| Sbjct: 1589 gagtacggtcatgtgcttct 1570
>gb|AF085249.1|AF085249 Gallus gallus calcium/calmodulin-dependent kinase type II beta subunit mRNA, complete cds Length = 1703 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tggccaggaggaggttctct 192 |||||||||||||||||||| Sbjct: 470 tggccaggaggaggttctct 451
>dbj|AB169182.1| Macaca fascicularis testis cDNA, clone: QtsA-17816, similar to human lactate dehydrogenase C (LDHC), transcript variant 2,mRNA, RefSeq: NM_017448.1 Length = 1215 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 204 actgaaggatttggctgatg 223
>gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosome 13, complete sequence Length = 152915 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 agtgtttgagagagggaaca 618 |||||||||||||||||||| Sbjct: 1220 agtgtttgagagagggaaca 1239
>gb|AF401097.1| Homo sapiens lactate dehydrogenase C (LDHC) mRNA, complete sequence, alternatively spliced Length = 1047 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 178 actgaaggatttggctgatg 197
>gb|AC124789.12| Homo sapiens chromosome 17, clone RP11-923C2, complete sequence Length = 105701 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagtacggtcatgtgcttct 319 |||||||||||||||||||| Sbjct: 9527 gagtacggtcatgtgcttct 9546
>ref|NM_204294.1| Gallus gallus calcium/calmodulin-dependent protein kinase (CaM kinase) II beta (CAMK2B), mRNA Length = 1703 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tggccaggaggaggttctct 192 |||||||||||||||||||| Sbjct: 470 tggccaggaggaggttctct 451
>ref|XM_573834.1| PREDICTED: Rattus norvegicus similar to OTTHUMP00000018508 (LOC498559), mRNA Length = 1111 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 acagcagctatttccttgaa 236 |||||||||||||||||||| Sbjct: 362 acagcagctatttccttgaa 343
>gb|AY892969.1| Synthetic construct Homo sapiens clone FLH141605.01L lactate dehydrogenase C (LDHC) mRNA, partial cds Length = 999 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 120 actgaaggatttggctgatg 139
>gb|AY890512.1| Synthetic construct Homo sapiens clone FLH141609.01X lactate dehydrogenase C (LDHC) mRNA, complete cds Length = 999 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 120 actgaaggatttggctgatg 139
>dbj|AK058181.1| Homo sapiens cDNA FLJ25452 fis, clone TST08814, highly similar to L-LACTATE DEHYDROGENASE X CHAIN (EC 1.1.1.27) Length = 1204 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 208 actgaaggatttggctgatg 227
>gb|BC090043.1| Homo sapiens lactate dehydrogenase C, transcript variant 2, mRNA (cDNA clone MGC:111073 IMAGE:30387780), complete cds Length = 1216 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 184 actgaaggatttggctgatg 203
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tcaatcatctccacttccag 473 |||||||||||||||||||| Sbjct: 124538 tcaatcatctccacttccag 124519
>gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, complete sequence Length = 174529 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 599 agtgtttgagagagggaaca 618 |||||||||||||||||||| Sbjct: 22388 agtgtttgagagagggaaca 22369
>ref|NM_014598.1| Homo sapiens suppressor of cytokine signaling 7 (SOCS7), mRNA Length = 2162 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagtacggtcatgtgcttct 319 |||||||||||||||||||| Sbjct: 2054 gagtacggtcatgtgcttct 2035
>gb|AC135118.3| Mus musculus BAC clone RP24-450N10 from 3, complete sequence Length = 188353 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ttaggcttggttacaacagc 434 |||||||||||||||||||| Sbjct: 18589 ttaggcttggttacaacagc 18570
>gb|AC167974.3| Mus musculus BAC clone RP23-314B11 from chromosome 1, complete sequence Length = 210757 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctttgccaccatcaatcatc 462 |||||||||||||||||||| Sbjct: 11846 ctttgccaccatcaatcatc 11865
>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete sequence Length = 132015 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ccaggaggaggttctctttc 195 |||||||||||||||||||| Sbjct: 39010 ccaggaggaggttctctttc 38991
>gb|J02938.1|HUMLDHX Human testis-specific lactate dehydrogenase (LDHC4, LDHX) mRNA Length = 1179 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 186 actgaaggatttggctgatg 205
>gb|U13680.1|HSU13680 Human lactate dehydrogenase-C (LDH-C) mRNA, complete cds Length = 1254 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 actgaaggatttggctgatg 639 |||||||||||||||||||| Sbjct: 261 actgaaggatttggctgatg 280 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,940,536 Number of Sequences: 3902068 Number of extensions: 5940536 Number of successful extensions: 112250 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111933 Number of HSP's gapped (non-prelim): 311 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)