ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
2gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 131 3e-27
3gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
4ref|NM_197865.1| Oryza sativa (japonica cultivar-group) putative... 127 4e-26
5ref|NM_106644.3| Arabidopsis thaliana ATP binding / ATP-dependen... 42 2.0
6gb|AC006669.1| Caenorhabditis elegans fosmid H43E16, complete se... 42 2.0
7gb|U41263.2| Caenorhabditis elegans cosmid T19D12, complete sequ... 42 2.0
8gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, comp... 42 2.0
9gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 42 2.0
10dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 42 2.0
11gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 42 2.0
12ref|XM_475175.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
13gb|AC161226.7| Mus musculus chromosome 3, clone RP23-298B8, comp... 40 7.8
14gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 7.8
15gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 7.8
16gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 7.8
17gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
18ref|XM_445995.1| Candida glabrata CBS138, CAGL0F00495g partial mRNA 40 7.8
19emb|Z49966.1|CEF35C11 Caenorhabditis elegans Cosmid F35C11, comp... 40 7.8
20gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.8
21gb|AC009163.6| Homo sapiens chromosome 16 clone RP11-77K12, comp... 40 7.8
22emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on ch... 40 7.8
23emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chr... 40 7.8
24ref|XM_966236.1| PREDICTED: Tribolium castaneum similar to CG171... 40 7.8
25emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 40 7.8
26emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 7.8
27emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, ... 40 7.8
28emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BA... 40 7.8
29emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in... 40 7.8
30gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome... 40 7.8
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
32gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromos... 40 7.8
33gb|AF219991.1|AF219991 Homo sapiens intestinal N-acetylglucosami... 40 7.8
34dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 7.8
35dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
36dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
37gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 7.8
38gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 7.8
39gb|AC167928.2| Mycosphaerella graminicola clone JGIBBWB-9H23, co... 40 7.8
40gb|AC004589.1|AC004589 Homo sapiens chromosome 9q34, clone 269A1... 40 7.8

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  131 bits (66), Expect = 3e-27
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                            
Query: 223      agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282
                |||||||||| || |||||||||||| | | |||||||||||||  |||||| |||||||
Sbjct: 22301696 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 22301637

                                                                            
Query: 283      taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342
                |||| ||||||||  |||| |||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 22301636 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 22301577

                                                          
Query: 343      caatcccaccaccggacttgatttgcgatcatgctaactgca 384
                | |||||| ||||  |||  ||||||  |||||| |||||||
Sbjct: 22301576 ccatcccatcaccaaactccatttgcagtcatgccaactgca 22301535



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 147/181 (81%)
 Strand = Plus / Minus

                                                                            
Query: 386      agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445
                |||||| || ||||| || |||||||  || || |||||||||||||||||||| || ||
Sbjct: 22301322 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 22301263

                                                                            
Query: 446      gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505
                |||||||||| |||||| ||| ||||| ||||| || ||| |||| ||   | |||||||
Sbjct: 22301262 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 22301203

                                                                            
Query: 506      ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565
                ||||||| | ||    ||||| |||||||||||   |||||| |||||||||| ||||||
Sbjct: 22301202 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 22301143

                 
Query: 566      g 566
                |
Sbjct: 22301142 g 22301142



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                            
Query: 94       aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153
                ||||||||||| |||||||||||||  ||    ||||||| ||||| |||||||||  ||
Sbjct: 22302039 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 22301980

                                                      
Query: 154      cccttttaagagatgcttttggtcctgataatctcaag 191
                | ||  || | |||||||||| | ||||||||||||||
Sbjct: 22301979 cactcatatgggatgcttttgctactgataatctcaag 22301942



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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
              sequence
          Length = 172427

 Score =  131 bits (66), Expect = 3e-27
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                          
Query: 223    agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282
              |||||||||| || |||||||||||| | | |||||||||||||  |||||| |||||||
Sbjct: 118939 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 118880

                                                                          
Query: 283    taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342
              |||| ||||||||  |||| |||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 118879 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 118820

                                                        
Query: 343    caatcccaccaccggacttgatttgcgatcatgctaactgca 384
              | |||||| ||||  |||  ||||||  |||||| |||||||
Sbjct: 118819 ccatcccatcaccaaactccatttgcagtcatgccaactgca 118778



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 147/181 (81%)
 Strand = Plus / Minus

                                                                          
Query: 386    agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445
              |||||| || ||||| || |||||||  || || |||||||||||||||||||| || ||
Sbjct: 118565 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 118506

                                                                          
Query: 446    gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505
              |||||||||| |||||| ||| ||||| ||||| || ||| |||| ||   | |||||||
Sbjct: 118505 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 118446

                                                                          
Query: 506    ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565
              ||||||| | ||    ||||| |||||||||||   |||||| |||||||||| ||||||
Sbjct: 118445 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 118386

               
Query: 566    g 566
              |
Sbjct: 118385 g 118385



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                          
Query: 94     aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153
              ||||||||||| |||||||||||||  ||    ||||||| ||||| |||||||||  ||
Sbjct: 119282 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 119223

                                                    
Query: 154    cccttttaagagatgcttttggtcctgataatctcaag 191
              | ||  || | |||||||||| | ||||||||||||||
Sbjct: 119222 cactcatatgggatgcttttgctactgataatctcaag 119185



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  131 bits (66), Expect = 3e-27
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                            
Query: 223      agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282
                |||||||||| || |||||||||||| | | |||||||||||||  |||||| |||||||
Sbjct: 22313764 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 22313705

                                                                            
Query: 283      taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342
                |||| ||||||||  |||| |||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 22313704 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 22313645

                                                          
Query: 343      caatcccaccaccggacttgatttgcgatcatgctaactgca 384
                | |||||| ||||  |||  ||||||  |||||| |||||||
Sbjct: 22313644 ccatcccatcaccaaactccatttgcagtcatgccaactgca 22313603



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 147/181 (81%)
 Strand = Plus / Minus

                                                                            
Query: 386      agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445
                |||||| || ||||| || |||||||  || || |||||||||||||||||||| || ||
Sbjct: 22313390 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 22313331

                                                                            
Query: 446      gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505
                |||||||||| |||||| ||| ||||| ||||| || ||| |||| ||   | |||||||
Sbjct: 22313330 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 22313271

                                                                            
Query: 506      ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565
                ||||||| | ||    ||||| |||||||||||   |||||| |||||||||| ||||||
Sbjct: 22313270 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 22313211

                 
Query: 566      g 566
                |
Sbjct: 22313210 g 22313210



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                            
Query: 94       aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153
                ||||||||||| |||||||||||||  ||    ||||||| ||||| |||||||||  ||
Sbjct: 22314107 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 22314048

                                                      
Query: 154      cccttttaagagatgcttttggtcctgataatctcaag 191
                | ||  || | |||||||||| | ||||||||||||||
Sbjct: 22314047 cactcatatgggatgcttttgctactgataatctcaag 22314010



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>ref|NM_197865.1| Oryza sativa (japonica cultivar-group) putative replication factor
           (OSJNBa0003O19.19), mRNA
          Length = 861

 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Plus

                                                                       
Query: 94  aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153
           ||||||||||| |||||||||||||  ||    ||||||| ||||| |||||||||  ||
Sbjct: 626 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 685

                                                                       
Query: 154 cccttttaagagatgcttttggtcctgataatctcaagatggaggaaatcacaaagagaa 213
           | ||  || | |||||||||| | |||||||||||||||| ||||||   ||||||||| 
Sbjct: 686 cactcatatgggatgcttttgctactgataatctcaagatagaggaacagacaaagagat 745

                                                                       
Query: 214 tcgagctgaagggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatc 273
           ||||||||||||||||||| || |||||||||||| | | |||||||||||||  |||||
Sbjct: 746 tcgagctgaagggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatc 805

                   
Query: 274 acgtggag 281
           | ||||||
Sbjct: 806 atgtggag 813



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>ref|NM_106644.3| Arabidopsis thaliana ATP binding / ATP-dependent DNA helicase/
           ATP-dependent helicase/ DNA binding / hydrolase, acting
           on acid anhydrides, in phosph> AT1G79950 mRNA, complete
           cds
          Length = 3123

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  aacgccaatgcaaccatttca 108
           |||||||||||||||||||||
Sbjct: 620 aacgccaatgcaaccatttca 640



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>gb|AC006669.1| Caenorhabditis elegans fosmid H43E16, complete sequence
          Length = 12412

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 475 aaattattttcagctgctcca 495
           |||||||||||||||||||||
Sbjct: 747 aaattattttcagctgctcca 767



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>gb|U41263.2| Caenorhabditis elegans cosmid T19D12, complete sequence
          Length = 42596

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 475   aaattattttcagctgctcca 495
             |||||||||||||||||||||
Sbjct: 36843 aaattattttcagctgctcca 36863



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>gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, complete sequence
          Length = 157606

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   gatgcttttggtcctgataat 185
             |||||||||||||||||||||
Sbjct: 23211 gatgcttttggtcctgataat 23191



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>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    aacgccaatgcaaccatttca 108
             |||||||||||||||||||||
Sbjct: 29659 aacgccaatgcaaccatttca 29639



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>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 551    accttcatttgatgagataat 571
              |||||||||||||||||||||
Sbjct: 196194 accttcatttgatgagataat 196214



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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete
             sequence
          Length = 116905

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    aacgccaatgcaaccatttca 108
             |||||||||||||||||||||
Sbjct: 11285 aacgccaatgcaaccatttca 11305



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>ref|XM_475175.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  aggccgtcgccgatgagctc 71
           ||||||||||||||||||||
Sbjct: 368 aggccgtcgccgatgagctc 349



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>gb|AC161226.7| Mus musculus chromosome 3, clone RP23-298B8, complete sequence
          Length = 200107

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    aagatggaggaaatcacaaa 208
              ||||||||||||||||||||
Sbjct: 117078 aagatggaggaaatcacaaa 117097



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4381666 tgcaaccatttcatatttga 4381685



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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4390941 tgcaaccatttcatatttga 4390960



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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4391503 tgcaaccatttcatatttga 4391522



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>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aggccgtcgccgatgagctc 71
              ||||||||||||||||||||
Sbjct: 136685 aggccgtcgccgatgagctc 136666



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>ref|XM_445995.1| Candida glabrata CBS138, CAGL0F00495g partial mRNA
          Length = 7371

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  tcaacattatatcggttggt 447
            ||||||||||||||||||||
Sbjct: 7338 tcaacattatatcggttggt 7357



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>emb|Z49966.1|CEF35C11 Caenorhabditis elegans Cosmid F35C11, complete sequence
          Length = 25450

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   aaaattattttcagctgctc 493
             ||||||||||||||||||||
Sbjct: 18208 aaaattattttcagctgctc 18227



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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4439073 tgcaaccatttcatatttga 4439092



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>gb|AC009163.6| Homo sapiens chromosome 16 clone RP11-77K12, complete sequence
          Length = 157358

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    ggaagagaagcatggtgctg 152
              ||||||||||||||||||||
Sbjct: 123164 ggaagagaagcatggtgctg 123145



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ggaagagaagcatggtgctg 152
             ||||||||||||||||||||
Sbjct: 71192 ggaagagaagcatggtgctg 71173



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>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the
             TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for
             chromosome 9 open reading frame 9 protein, the 5' end of
             gene FLJ32704, two novel gene, the 5' end of a novel gene
             and three CpG islands, complete sequence
          Length = 199113

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   aagagaagcatggtgctggc 154
             ||||||||||||||||||||
Sbjct: 87267 aagagaagcatggtgctggc 87248



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>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete
             sequence
          Length = 146127

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   tgcaacaaaattattttcag 487
             ||||||||||||||||||||
Sbjct: 60570 tgcaacaaaattattttcag 60551



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>ref|XM_966236.1| PREDICTED: Tribolium castaneum similar to CG17181-PA (LOC659972),
           mRNA
          Length = 1182

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  catctgcaacaaggccgtcgccga 64
           |||||||||||||||| |||||||
Sbjct: 735 catctgcaacaaggccttcgccga 758



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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   tcaacattatatcggttggt 447
             ||||||||||||||||||||
Sbjct: 45839 tcaacattatatcggttggt 45820



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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     ccgtcgccgatgagctccaccgga 78
              ||||||||||| ||||||||||||
Sbjct: 233761 ccgtcgccgatcagctccaccgga 233784



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>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
          Length = 199382

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    ttattttcagctgctccagt 497
              ||||||||||||||||||||
Sbjct: 163961 ttattttcagctgctccagt 163980



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>emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T5K18 (ESSA project)
          Length = 90551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   ttattttcagctgctccagt 497
             ||||||||||||||||||||
Sbjct: 57910 ttattttcagctgctccagt 57929



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>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13,
             complete sequence
          Length = 193538

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   ataactactttgttgaatga 340
             ||||||||||||||||||||
Sbjct: 12621 ataactactttgttgaatga 12640



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>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence
          Length = 203324

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     caaccatttcatatttgaag 117
              ||||||||||||||||||||
Sbjct: 160351 caaccatttcatatttgaag 160332



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 52       aggccgtcgccgatgagctc 71
                ||||||||||||||||||||
Sbjct: 18343473 aggccgtcgccgatgagctc 18343454



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>gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromosome unknown, complete
              sequence
          Length = 240555

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    aaaccaccttcatttgatga 565
              ||||||||||||||||||||
Sbjct: 126116 aaaccaccttcatttgatga 126135



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>gb|AF219991.1|AF219991 Homo sapiens intestinal N-acetylglucosamine-6-O-sulfotransferase
             (CHST5) and corneal
             N-acetylglucosamine-6-O-sulfotransferase (CHST6) genes,
             complete cds
          Length = 71503

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ggaagagaagcatggtgctg 152
             ||||||||||||||||||||
Sbjct: 40498 ggaagagaagcatggtgctg 40517



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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 546   aaaccaccttcatttgatga 565
             ||||||||||||||||||||
Sbjct: 72528 aaaccaccttcatttgatga 72547



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>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full
            insert sequence
          Length = 1711

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aggccgtcgccgatgagctc 71
            ||||||||||||||||||||
Sbjct: 1269 aggccgtcgccgatgagctc 1288



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>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full
           insert sequence
          Length = 1893

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  aggccgtcgccgatgagctc 71
           ||||||||||||||||||||
Sbjct: 398 aggccgtcgccgatgagctc 379



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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4390814 tgcaaccatttcatatttga 4390833



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tgcaaccatttcatatttga 115
               ||||||||||||||||||||
Sbjct: 4367784 tgcaaccatttcatatttga 4367803



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>gb|AC167928.2| Mycosphaerella graminicola clone JGIBBWB-9H23, complete sequence
          Length = 31059

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gggaattcatctgcaacaag 53
             ||||||||||||||||||||
Sbjct: 23751 gggaattcatctgcaacaag 23770



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>gb|AC004589.1|AC004589 Homo sapiens chromosome 9q34, clone 269A1, complete sequence
          Length = 35488

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   aagagaagcatggtgctggc 154
             ||||||||||||||||||||
Sbjct: 31954 aagagaagcatggtgctggc 31973


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,446,151
Number of Sequences: 3902068
Number of extensions: 5446151
Number of successful extensions: 104181
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103851
Number of HSP's gapped (non-prelim): 325
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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