| Clone Name | bags15g14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 3e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 223 agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282 |||||||||| || |||||||||||| | | ||||||||||||| |||||| ||||||| Sbjct: 22301696 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 22301637 Query: 283 taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342 |||| |||||||| |||| |||||||||||| ||||||| ||||||||||||||||| | Sbjct: 22301636 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 22301577 Query: 343 caatcccaccaccggacttgatttgcgatcatgctaactgca 384 | |||||| |||| ||| |||||| |||||| ||||||| Sbjct: 22301576 ccatcccatcaccaaactccatttgcagtcatgccaactgca 22301535 Score = 89.7 bits (45), Expect = 9e-15 Identities = 147/181 (81%) Strand = Plus / Minus Query: 386 agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445 |||||| || ||||| || ||||||| || || |||||||||||||||||||| || || Sbjct: 22301322 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 22301263 Query: 446 gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505 |||||||||| |||||| ||| ||||| ||||| || ||| |||| || | ||||||| Sbjct: 22301262 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 22301203 Query: 506 ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565 ||||||| | || ||||| ||||||||||| |||||| |||||||||| |||||| Sbjct: 22301202 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 22301143 Query: 566 g 566 | Sbjct: 22301142 g 22301142 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 94 aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153 ||||||||||| ||||||||||||| || ||||||| ||||| ||||||||| || Sbjct: 22302039 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 22301980 Query: 154 cccttttaagagatgcttttggtcctgataatctcaag 191 | || || | |||||||||| | |||||||||||||| Sbjct: 22301979 cactcatatgggatgcttttgctactgataatctcaag 22301942
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 131 bits (66), Expect = 3e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 223 agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282 |||||||||| || |||||||||||| | | ||||||||||||| |||||| ||||||| Sbjct: 118939 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 118880 Query: 283 taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342 |||| |||||||| |||| |||||||||||| ||||||| ||||||||||||||||| | Sbjct: 118879 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 118820 Query: 343 caatcccaccaccggacttgatttgcgatcatgctaactgca 384 | |||||| |||| ||| |||||| |||||| ||||||| Sbjct: 118819 ccatcccatcaccaaactccatttgcagtcatgccaactgca 118778 Score = 89.7 bits (45), Expect = 9e-15 Identities = 147/181 (81%) Strand = Plus / Minus Query: 386 agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445 |||||| || ||||| || ||||||| || || |||||||||||||||||||| || || Sbjct: 118565 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 118506 Query: 446 gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505 |||||||||| |||||| ||| ||||| ||||| || ||| |||| || | ||||||| Sbjct: 118505 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 118446 Query: 506 ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565 ||||||| | || ||||| ||||||||||| |||||| |||||||||| |||||| Sbjct: 118445 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 118386 Query: 566 g 566 | Sbjct: 118385 g 118385 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 94 aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153 ||||||||||| ||||||||||||| || ||||||| ||||| ||||||||| || Sbjct: 119282 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 119223 Query: 154 cccttttaagagatgcttttggtcctgataatctcaag 191 | || || | |||||||||| | |||||||||||||| Sbjct: 119222 cactcatatgggatgcttttgctactgataatctcaag 119185
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 3e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 223 agggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtggagg 282 |||||||||| || |||||||||||| | | ||||||||||||| |||||| ||||||| Sbjct: 22313764 agggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatcatgtggagg 22313705 Query: 283 taaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaatgagt 342 |||| |||||||| |||| |||||||||||| ||||||| ||||||||||||||||| | Sbjct: 22313704 taaatttggctgacatacacggctatgagaagcatgtcattactactttgttgaatgaat 22313645 Query: 343 caatcccaccaccggacttgatttgcgatcatgctaactgca 384 | |||||| |||| ||| |||||| |||||| ||||||| Sbjct: 22313644 ccatcccatcaccaaactccatttgcagtcatgccaactgca 22313603 Score = 89.7 bits (45), Expect = 9e-15 Identities = 147/181 (81%) Strand = Plus / Minus Query: 386 agtgattgtggtccatgatgctgataggctttcgtctgatcttcaacattatatcggttg 445 |||||| || ||||| || ||||||| || || |||||||||||||||||||| || || Sbjct: 22313390 agtgatcgtcgtccacgacgctgataaactctcatctgatcttcaacattatattggatg 22313331 Query: 446 gtttctggggcggtatgcaggttgcaacaaaattattttcagctgctccagttcttcaaa 505 |||||||||| |||||| ||| ||||| ||||| || ||| |||| || | ||||||| Sbjct: 22313330 gtttctggggaggtatgtaggatgcaataaaatcatgttctgctgttctgatgcttcaaa 22313271 Query: 506 ccttgagtccgttgaacatctatgcaaggttgtccgacttaaaccaccttcatttgatga 565 ||||||| | || ||||| ||||||||||| |||||| |||||||||| |||||| Sbjct: 22313270 ccttgaggctgtcaggcatctctgcaaggttgtgacacttaagccaccttcatctgatga 22313211 Query: 566 g 566 | Sbjct: 22313210 g 22313210 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 94 aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153 ||||||||||| ||||||||||||| || ||||||| ||||| ||||||||| || Sbjct: 22314107 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 22314048 Query: 154 cccttttaagagatgcttttggtcctgataatctcaag 191 | || || | |||||||||| | |||||||||||||| Sbjct: 22314047 cactcatatgggatgcttttgctactgataatctcaag 22314010
>ref|NM_197865.1| Oryza sativa (japonica cultivar-group) putative replication factor (OSJNBa0003O19.19), mRNA Length = 861 Score = 127 bits (64), Expect = 4e-26 Identities = 157/188 (83%) Strand = Plus / Plus Query: 94 aatgcaaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctgg 153 ||||||||||| ||||||||||||| || ||||||| ||||| ||||||||| || Sbjct: 626 aatgcaaccatatcatatttgaaggcccgacctccgtcggaaagaggagcatggtgtcgg 685 Query: 154 cccttttaagagatgcttttggtcctgataatctcaagatggaggaaatcacaaagagaa 213 | || || | |||||||||| | |||||||||||||||| |||||| ||||||||| Sbjct: 686 cactcatatgggatgcttttgctactgataatctcaagatagaggaacagacaaagagat 745 Query: 214 tcgagctgaagggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatc 273 ||||||||||||||||||| || |||||||||||| | | ||||||||||||| ||||| Sbjct: 746 tcgagctgaagggagaaattgcaaaacacattgatatcagagtgaagatttcaagtcatc 805 Query: 274 acgtggag 281 | |||||| Sbjct: 806 atgtggag 813
>ref|NM_106644.3| Arabidopsis thaliana ATP binding / ATP-dependent DNA helicase/ ATP-dependent helicase/ DNA binding / hydrolase, acting on acid anhydrides, in phosph> AT1G79950 mRNA, complete cds Length = 3123 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 aacgccaatgcaaccatttca 108 ||||||||||||||||||||| Sbjct: 620 aacgccaatgcaaccatttca 640
>gb|AC006669.1| Caenorhabditis elegans fosmid H43E16, complete sequence Length = 12412 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 aaattattttcagctgctcca 495 ||||||||||||||||||||| Sbjct: 747 aaattattttcagctgctcca 767
>gb|U41263.2| Caenorhabditis elegans cosmid T19D12, complete sequence Length = 42596 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 aaattattttcagctgctcca 495 ||||||||||||||||||||| Sbjct: 36843 aaattattttcagctgctcca 36863
>gb|AC090897.4| Homo sapiens chromosome 18, clone RP11-61D1, complete sequence Length = 157606 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gatgcttttggtcctgataat 185 ||||||||||||||||||||| Sbjct: 23211 gatgcttttggtcctgataat 23191
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 aacgccaatgcaaccatttca 108 ||||||||||||||||||||| Sbjct: 29659 aacgccaatgcaaccatttca 29639
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 accttcatttgatgagataat 571 ||||||||||||||||||||| Sbjct: 196194 accttcatttgatgagataat 196214
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 aacgccaatgcaaccatttca 108 ||||||||||||||||||||| Sbjct: 11285 aacgccaatgcaaccatttca 11305
>ref|XM_475175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aggccgtcgccgatgagctc 71 |||||||||||||||||||| Sbjct: 368 aggccgtcgccgatgagctc 349
>gb|AC161226.7| Mus musculus chromosome 3, clone RP23-298B8, complete sequence Length = 200107 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aagatggaggaaatcacaaa 208 |||||||||||||||||||| Sbjct: 117078 aagatggaggaaatcacaaa 117097
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4381666 tgcaaccatttcatatttga 4381685
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4390941 tgcaaccatttcatatttga 4390960
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4391503 tgcaaccatttcatatttga 4391522
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aggccgtcgccgatgagctc 71 |||||||||||||||||||| Sbjct: 136685 aggccgtcgccgatgagctc 136666
>ref|XM_445995.1| Candida glabrata CBS138, CAGL0F00495g partial mRNA Length = 7371 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tcaacattatatcggttggt 447 |||||||||||||||||||| Sbjct: 7338 tcaacattatatcggttggt 7357
>emb|Z49966.1|CEF35C11 Caenorhabditis elegans Cosmid F35C11, complete sequence Length = 25450 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aaaattattttcagctgctc 493 |||||||||||||||||||| Sbjct: 18208 aaaattattttcagctgctc 18227
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4439073 tgcaaccatttcatatttga 4439092
>gb|AC009163.6| Homo sapiens chromosome 16 clone RP11-77K12, complete sequence Length = 157358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaagagaagcatggtgctg 152 |||||||||||||||||||| Sbjct: 123164 ggaagagaagcatggtgctg 123145 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggaagagaagcatggtgctg 152 |||||||||||||||||||| Sbjct: 71192 ggaagagaagcatggtgctg 71173
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aagagaagcatggtgctggc 154 |||||||||||||||||||| Sbjct: 87267 aagagaagcatggtgctggc 87248
>emb|AL391838.9| Human DNA sequence from clone RP11-307O11 on chromosome 13, complete sequence Length = 146127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgcaacaaaattattttcag 487 |||||||||||||||||||| Sbjct: 60570 tgcaacaaaattattttcag 60551
>ref|XM_966236.1| PREDICTED: Tribolium castaneum similar to CG17181-PA (LOC659972), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 catctgcaacaaggccgtcgccga 64 |||||||||||||||| ||||||| Sbjct: 735 catctgcaacaaggccttcgccga 758
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 tcaacattatatcggttggt 447 |||||||||||||||||||| Sbjct: 45839 tcaacattatatcggttggt 45820
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ccgtcgccgatgagctccaccgga 78 ||||||||||| |||||||||||| Sbjct: 233761 ccgtcgccgatcagctccaccgga 233784
>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50 Length = 199382 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttattttcagctgctccagt 497 |||||||||||||||||||| Sbjct: 163961 ttattttcagctgctccagt 163980
>emb|AL022580.1|ATT5K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T5K18 (ESSA project) Length = 90551 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ttattttcagctgctccagt 497 |||||||||||||||||||| Sbjct: 57910 ttattttcagctgctccagt 57929
>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13, complete sequence Length = 193538 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ataactactttgttgaatga 340 |||||||||||||||||||| Sbjct: 12621 ataactactttgttgaatga 12640
>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence Length = 203324 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 caaccatttcatatttgaag 117 |||||||||||||||||||| Sbjct: 160351 caaccatttcatatttgaag 160332
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aggccgtcgccgatgagctc 71 |||||||||||||||||||| Sbjct: 18343473 aggccgtcgccgatgagctc 18343454
>gb|AC163699.4| Gallus gallus BAC clone CH261-138A17 from chromosome unknown, complete sequence Length = 240555 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 aaaccaccttcatttgatga 565 |||||||||||||||||||| Sbjct: 126116 aaaccaccttcatttgatga 126135
>gb|AF219991.1|AF219991 Homo sapiens intestinal N-acetylglucosamine-6-O-sulfotransferase (CHST5) and corneal N-acetylglucosamine-6-O-sulfotransferase (CHST6) genes, complete cds Length = 71503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaagagaagcatggtgctg 152 |||||||||||||||||||| Sbjct: 40498 ggaagagaagcatggtgctg 40517
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 aaaccaccttcatttgatga 565 |||||||||||||||||||| Sbjct: 72528 aaaccaccttcatttgatga 72547
>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full insert sequence Length = 1711 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aggccgtcgccgatgagctc 71 |||||||||||||||||||| Sbjct: 1269 aggccgtcgccgatgagctc 1288
>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aggccgtcgccgatgagctc 71 |||||||||||||||||||| Sbjct: 398 aggccgtcgccgatgagctc 379
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4390814 tgcaaccatttcatatttga 4390833
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tgcaaccatttcatatttga 115 |||||||||||||||||||| Sbjct: 4367784 tgcaaccatttcatatttga 4367803
>gb|AC167928.2| Mycosphaerella graminicola clone JGIBBWB-9H23, complete sequence Length = 31059 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 gggaattcatctgcaacaag 53 |||||||||||||||||||| Sbjct: 23751 gggaattcatctgcaacaag 23770
>gb|AC004589.1|AC004589 Homo sapiens chromosome 9q34, clone 269A1, complete sequence Length = 35488 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aagagaagcatggtgctggc 154 |||||||||||||||||||| Sbjct: 31954 aagagaagcatggtgctggc 31973 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,446,151 Number of Sequences: 3902068 Number of extensions: 5446151 Number of successful extensions: 104181 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103851 Number of HSP's gapped (non-prelim): 325 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)