Clone Information

BLAST Search Result

Clone Name	bags15g04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase ...	270	1e-72
2	MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subu...	159	6e-39
3	MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subu...	157	2e-38
4	MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subu...	157	2e-38
5	MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subuni...	154	1e-37
6	MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subu...	153	2e-37
7	MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subu...	150	2e-36
8	MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subu...	144	1e-34
9	MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase ...	138	1e-32
10	MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subu...	129	4e-30
11	UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex co...	125	9e-29
12	UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex co...	122	5e-28
13	UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex co...	122	8e-28
14	MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subu...	111	1e-24
15	UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex co...	88	1e-17
16	YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III	87	3e-17
17	UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex co...	78	2e-14
18	MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase ...	69	1e-11
19	MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha sub...	65	9e-11
20	Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4....	65	9e-11
21	MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha sub...	65	1e-10
22	MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase...	60	5e-09
23	Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)	58	2e-08
24	MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase...	58	2e-08
25	Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)	55	9e-08
26	MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha sub...	53	4e-07
27	MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha sub...	52	1e-06
28	UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex co...	51	2e-06
29	MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha sub...	51	2e-06
30	UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex co...	50	3e-06
31	UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core...	50	4e-06
32	Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4....	50	4e-06
33	Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (...	50	4e-06
34	YMXG_BACSU (Q04805) Hypothetical zinc protease ymxG (EC 3.4.99.-...	50	5e-06
35	Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)	49	6e-06
36	MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha sub...	49	8e-06
37	UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex co...	47	2e-05
38	MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha sub...	47	2e-05
39	MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subun...	44	3e-04
40	Y4WB_RHISN (P55680) Hypothetical zinc protease-like protein y4wB	41	0.002
41	YP183_YEAST (Q08924) WD-repeat protein YPL183C	32	1.1
42	YPD1_CAEEL (P48053) Hypothetical protein C05D11.1 in chromosome III	31	2.4
43	C4BP_HUMAN (P04003) C4b-binding protein alpha chain precursor (C...	30	3.1
44	GATE_THEVO (Q979L9) Glutamyl-tRNA(Gln) amidotransferase subunit ...	30	4.1
45	FIMD_SALTY (P37924) Outer membrane usher protein fimD precursor	30	4.1
46	LEU1_CORGL (P42455) 2-isopropylmalate synthase (EC 2.3.3.13) (Al...	30	5.3
47	CRBB2_CHICK (Q05714) Beta crystallin B2 (BP)	30	5.3
48	NEO1_MOUSE (P97798) Neogenin precursor	30	5.3
49	CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor	30	5.3
50	AROC_YEAST (P28777) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	29	7.0
51	SCPDH_ARATH (Q8LGI2) Probable mitochondrial saccharopine dehydro...	29	9.1
52	PVG1_SCHPO (Q9UT27) Pyruvyltransferase 1 precursor (EC 2.-.-.-) ...	29	9.1
53	CARA_LACLA (Q9CF80) Carbamoyl-phosphate synthase small chain (EC...	29	9.1

>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 531

 Score =  270 bits (691), Expect = 1e-72
 Identities = 131/167 (78%), Positives = 150/167 (89%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATAFQYT LGR ILG A NVKSIT++DL +YI+ HYTASRMVI AAGAVKH+++V+Q K+
Sbjct: 239 ATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYTASRMVIAAAGAVKHEEVVEQVKK 298

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
           LF  L +DPTTT+ LVA +PA FTGSEVR+IDDD+PLAQFAVAF GASWTDPDS+ALMVM
Sbjct: 299 LFTKLSSDPTTTSQLVANEPASFTGSEVRMIDDDLPLAQFAVAFEGASWTDPDSVALMVM 358

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
           QTMLGSWNK+ GGGKH+GS+L QRVAIN+IAESIMAFNTNYKDTGLF
Sbjct: 359 QTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLF 405

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>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 490

 Score =  159 bits (401), Expect = 6e-39
 Identities = 79/167 (47%), Positives = 108/167 (64%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q T+LGR ILG  +N+KSI +KDLVDYI  HY   R+V+ AAG V HD++++ AK 
Sbjct: 200 ATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVSHDELLELAK- 258

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F    +  T    + A  P  FTGSE+R+ DD MPLA  AVA     W  PD+I LMV 
Sbjct: 259 -FHFGESLSTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAVAVEAVGWAHPDTICLMVA 317

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
            T++G+W++S GGG ++ S+L Q     ++  S  +FNT+Y DTGL+
Sbjct: 318 NTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLW 364

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>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 489

 Score =  157 bits (397), Expect = 2e-38
 Identities = 78/167 (46%), Positives = 108/167 (64%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q T+LGR ILG  +N+KSI++KDLVDYI  HY   R+V+ AAG V HD+++  AK 
Sbjct: 199 ATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAK- 257

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F    +  T    + A  P  FTGSE+R+ DD MPLA  A+A     W  PD+I LMV 
Sbjct: 258 -FHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVA 316

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
            T++G+W++S GGG ++ S+L Q     ++  S  +FNT+Y DTGL+
Sbjct: 317 NTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLW 363

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>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  157 bits (397), Expect = 2e-38
 Identities = 78/167 (46%), Positives = 108/167 (64%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q T+LGR ILG  +N+KSI++KDLVDYI  HY   R+V+ AAG V HD+++  AK 
Sbjct: 199 ATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAK- 257

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F    +  T    + A  P  FTGSE+R+ DD MPLA  A+A     W  PD+I LMV 
Sbjct: 258 -FHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVA 316

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
            T++G+W++S GGG ++ S+L Q     ++  S  +FNT+Y DTGL+
Sbjct: 317 NTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLW 363

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>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  154 bits (390), Expect = 1e-37
 Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q T+LGR ILG  +N+KSI++KDLVDYI  HY   R+V+ AAG V H+++++ AK 
Sbjct: 199 ATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAKF 258

Query: 208 LFKTLPTDPTTTNM--LVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALM 381
            F     D    +   + A  P  FTGSE+R+ DD MPLA  AVA     WT PD+I LM
Sbjct: 259 HFG----DSLCAHKGDVPALPPCKFTGSEIRVRDDKMPLAHLAVAIEAVGWTHPDTIRLM 314

Query: 382 VMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
           V  T++G+W++S GGG ++ S+L Q     ++  S  +FNT+Y DTGL+
Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLW 363

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>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score =  153 bits (387), Expect = 2e-37
 Identities = 76/167 (45%), Positives = 108/167 (64%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q T+LGR ILG  +N+KSI +KDLVDYI  HY   R+V+ AAG V H+++++ AK 
Sbjct: 199 ATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVCHNELLELAK- 257

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F    +  +    + A  P  FTGSE+R+ DD MPLA  A+A     W  PD+I LMV 
Sbjct: 258 -FHFGDSLCSHKGAIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVA 316

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
            T++G+W++S GGG ++ S+L Q     ++  S  +FNT+Y DTGL+
Sbjct: 317 NTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLW 363

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>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (Ubiquinol-cytochrome-c reductase complex core protein
           I) (EC 1.10.2.2)
          Length = 476

 Score =  150 bits (380), Expect = 2e-36
 Identities = 73/168 (43%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q+  LGR ILG  +N++ IT+ +LV+YI+N+YTA RMV+  AG V H+ +V+ A +
Sbjct: 182 ATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYTADRMVLVGAGGVPHEQLVEMADK 241

Query: 208 LFKTLP-TDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMV 384
            F  LP T P ++  +++K+   F GS++RI DD +P A  A+A  G SW+D D    +V
Sbjct: 242 YFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDTIPTANIAIAVEGVSWSDDDYFTGLV 301

Query: 385 MQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
            Q ++G+++K+ G   H GS+L   V  +D+A S M+F+T+Y DTGL+
Sbjct: 302 TQAIVGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLW 349

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>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 466

 Score =  144 bits (363), Expect = 1e-34
 Identities = 71/169 (42%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A AFQ   LGR ILG  +N+ SI + DL  YIQ +YTA RMV+   G V H  +V+ A++
Sbjct: 171 AVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTADRMVLVGTGGVDHQSLVKLAEK 230

Query: 208 LFKTLPT--DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALM 381
            F +LP   +P     L +++   F GSE RI DD++P A  A+A  G  W+ PD   +M
Sbjct: 231 HFSSLPVSANPLALGRLSSERKPTFVGSEARIRDDELPTAHVAIAVEGVGWSSPDYFPMM 290

Query: 382 VMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
           VMQ++ G+W++S G    + S L   ++ N +A S M+F+T+Y DTGL+
Sbjct: 291 VMQSIFGNWDRSLGASSLLSSRLSHIISSNSLANSFMSFSTSYSDTGLW 339

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>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 457

 Score =  138 bits (347), Expect = 1e-32
 Identities = 66/170 (38%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATA+Q   LGR ILG  +N++S+T++DL+ YI+++Y + RM+I++AG++ H+++V+ A++
Sbjct: 164 ATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEK 223

Query: 208 LFKTLPTDPTTTNMLVAKQPAI---FTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIAL 378
            F  L  +P+   + +     +   F GSE+R  DDD P A  A+A  G SW  PD    
Sbjct: 224 YFGHL--EPSAEQLSLGAPRGLKPRFVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTA 281

Query: 379 MVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
           +VMQ ++G+W+++ G   H+ S L   V  + +A S M+F+T+Y DTGL+
Sbjct: 282 LVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMSFSTSYSDTGLW 331

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>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (BeMPP1)
          Length = 465

 Score =  129 bits (325), Expect = 4e-30
 Identities = 73/167 (43%), Positives = 104/167 (62%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A AF   +LG  ILG  +N++++++ DL  YI+N+YTA RMV+  AG V H ++ + A+ 
Sbjct: 177 AAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYTADRMVVVGAGNVDHAELCKLAET 236

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F  LP        +   +PA FTGS+VRI  DDMP A  A+A  GASWT  D   L+V 
Sbjct: 237 NFGKLPQGSGKAKFV---RPA-FTGSDVRIRVDDMPTAHIALAVEGASWTSADHWPLLVA 292

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
             M+GS++++AG   H  S+L Q VA +++A S  +FNT Y DTGL+
Sbjct: 293 SAMIGSYDRAAGNA-HPSSKLAQIVAKHNLANSFTSFNTTYSDTGLW 338

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>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  125 bits (313), Expect = 9e-29
 Identities = 61/166 (36%), Positives = 97/166 (58%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATAFQ T L + + G ++NV+ +++ DL DY+  +Y A RMV+ AAG V+H  ++  A++
Sbjct: 189 ATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRNYKAPRMVLAAAGGVEHQQLLDLAQK 248

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
              ++ +     + +    P  FTGSE+R  DD +PLA  A+A  G  W +PD++ L V 
Sbjct: 249 HLSSV-SRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVTLQVA 307

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGL 525
             ++G ++ + GGG H+ S L      N + +S   FN +Y DTGL
Sbjct: 308 NAIIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGL 353

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>UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  122 bits (307), Expect = 5e-28
 Identities = 61/166 (36%), Positives = 96/166 (57%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATAFQ T L + + G ++NV+ +++ DL +Y+  HY A RMV+ AAG ++H  ++  A++
Sbjct: 189 ATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQK 248

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
            F  L +     + +    P  FTGS++   +D +PLA  A+A  G  W  PD++AL V 
Sbjct: 249 HFSGL-SGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPGWAHPDNVALQVA 307

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGL 525
             ++G ++ + GGG H+ S L    A N + +S   FN  Y DTGL
Sbjct: 308 NAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGL 353

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>UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score =  122 bits (305), Expect = 8e-28
 Identities = 60/166 (36%), Positives = 94/166 (56%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           ATAFQ T L + + G ++NV+ +++ DL +Y+  HY A RMV+ AAG V+H  ++  A++
Sbjct: 189 ATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQK 248

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVM 387
               +P      + +    P  FTGSE+R  DD +P A  A+A  G  W  PD++AL V 
Sbjct: 249 HLGGIPWT-YAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAIAVEGPGWASPDNVALQVA 307

Query: 388 QTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGL 525
             ++G ++ + GGG H+ S L      N + +S   F+  Y +TGL
Sbjct: 308 NAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGL 353

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>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 462

 Score =  111 bits (277), Expect = 1e-24
 Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 2/161 (1%)
 Frame = +1

Query: 52  LGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTD 231
           LGR ILG   N+KSIT+ DL DYI  +Y   RMV+  AGAV H+ +VQ A++ F  +P  
Sbjct: 176 LGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKS 235

Query: 232 PTTTNMLVAKQP-AIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSW 408
            +   +   + P  +F   E  I ++ +P    A+A  G SW+ PD    +  Q ++G+W
Sbjct: 236 ESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNW 295

Query: 409 NKSAGGGKHMGSELVQRVAIN-DIAESIMAFNTNYKDTGLF 528
           +++ G G +  S L    + N  +A S M+F+T+Y D+GL+
Sbjct: 296 DRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLW 336

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>UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 457

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQ--QA 201
           +TAFQ T L  P  G+ ++++++   DL  +  NH+  S  V+   G +KH+D+V   ++
Sbjct: 166 STAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIES 225

Query: 202 KELFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALM 381
           K L     T P      V K+ A F GSEVR+ DD +P A  ++A  G     P+     
Sbjct: 226 KNLSLQTGTKP------VLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAK 279

Query: 382 VMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
           +   + GS+N      +  G +L+  +    + ++   F+ +YKD+GL+
Sbjct: 280 LAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLW 328

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>YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III|
          Length = 471

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
 Frame = +1

Query: 10  LYSXSPATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDI 189
           L+    A  FQ T L   +LG+++++ +I+ + L ++ ++HY   RMV++A G     ++
Sbjct: 173 LFDMLHAAGFQGTPLALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGV-SNV 231

Query: 190 VQQAKELFKTLPTDPTTTNMLVAKQPAI----FTGSEVRIIDDDMPLAQFAVAFNGASWT 357
              A + F  L      +N    K P +    FTGSE R  +D++P    A A  G  + 
Sbjct: 232 SSLADKYFGDL------SNEYPRKVPQVDGTRFTGSEYRYRNDNVPHMYAAFAVEGVGYA 285

Query: 358 DPDSIALMVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNTNYKDTGLF 528
             D++AL +    +G W+ +    +   S LVQ++  +    ++  FN NYKDTGLF
Sbjct: 286 HKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGVHNLQHFNINYKDTGLF 342

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>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 494

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNV-KSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAK 204
           + AF+ + LG  ILG  +N+ KSITK  + D+++ HYT  RM +  +GAV H  +   A 
Sbjct: 168 SAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRMALVGSGAVDHGQLCDLAS 227

Query: 205 ELFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMV 384
           + F  LPT     +         F G + R  +   PL   AVAF     + PD+I + V
Sbjct: 228 KYFGALPTGQPKPSGFTR-----FLGGDKRETNQLNPLTHVAVAFQTPGISHPDAIKIKV 282

Query: 385 MQTMLGSWNKSAG 423
           ++ +LGS+++  G
Sbjct: 283 LEQLLGSYSRDKG 295

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>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 494

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
 Frame = +1

Query: 31  TAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKEL 210
           TAFQ  +LG  +L + D V  IT   + +Y++  Y    + +  AG +  +   +  KEL
Sbjct: 188 TAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRPEHLTLAYAG-IPQEIAKEITKEL 246

Query: 211 FKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQF-------AVAFNGASWTDPDS 369
           +  LP+        +   P+ +TG  + I   + P   +        +A  G   TDPD 
Sbjct: 247 YGHLPSSSLPPLEAI---PSHYTGGFMGIKKSEAPPVPYQQEFTHVVIAMEGLPVTDPDI 303

Query: 370 IALMVMQTMLGSWNK-SAGG-GKHMGSELVQRVAINDI--AESIMAFNTNYKDTGLF 528
            AL  +Q +LG     SAGG GK M S L   V +N     E+ MAFN +Y D+GLF
Sbjct: 304 YALACLQFLLGGGGSFSAGGPGKGMYSRLYLNV-LNQYPWVETCMAFNHSYTDSGLF 359

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>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 482

 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
 Frame = +1

Query: 34  AFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELF 213
           A+   +LG P++   + + SI+K  L+DY    YT    V    G V H    ++A EL 
Sbjct: 162 AYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPENTVAAFVG-VPH----EKALELT 216

Query: 214 KTLPTDPTTTNMLVAKQPAIFTGSEVRI----IDDDMP-LAQFAVAFNGASWTDPDSIAL 378
           +    D  +T+  + K+ A +TG E  I    +  ++P L    + F G     PD  AL
Sbjct: 217 EKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYAL 276

Query: 379 MVMQTMLGSWNK-SAGG-GKHMGSELVQRVAIND--IAESIMAFNTNYKDTGLF 528
             +QT+LG     SAGG GK M S L   V +N     E+ +AFN +Y D+G+F
Sbjct: 277 ATLQTLLGGGGSFSAGGPGKGMYSRLYTHV-LNQYYFVENCVAFNHSYSDSGIF 329

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>Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4.99.-)|
          Length = 459

 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
 Frame = +1

Query: 31  TAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKEL 210
           T F   +LGRP+LG+ D V ++T   +  + + HY  + +V+ AAG V H+ +V+Q +  
Sbjct: 178 TMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDPTHLVVAAAGNVDHNKVVRQVRAA 237

Query: 211 FKTLPT--DPTTTNMLV-AKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALM 381
           F+      DP    +   A +  +     V +I      A   +   G + TD    A+ 
Sbjct: 238 FEKSGALKDPAAQPLAPRAGRRTVRAAGRVELIGRKTEQAHVILGMPGLARTDERRWAMG 297

Query: 382 VMQTMLGSWNKSAGGGKHMGSELVQRV-AINDIAESIMAFNTNYKDTGLF 528
           V+ T LG      GG   M S L Q V     +A S+ ++ + + D GLF
Sbjct: 298 VLNTALG------GG---MSSRLFQEVREKRGLAYSVYSYTSGFADCGLF 338

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>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (Ubiquinol-cytochrome-c reductase subunit II) (EC
           1.10.2.2)
          Length = 504

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
 Frame = +1

Query: 55  GRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDP 234
           G  ++ +   +  +    L +++  +YTA RMV+ A+G V+H++ ++ A+ L   LP   
Sbjct: 224 GNSLMATEATINRLNSTVLEEFVAENYTAPRMVLAASG-VEHEEFLKVAEPLLSDLPKVA 282

Query: 235 TTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFN--GASWTDPDSIALMVMQTMLGSW 408
           T     + +   ++ G + R    D  +  FA+AF   G   ++ +S+ L V+Q ++G  
Sbjct: 283 T-----IEEPKPVYVGGDYR-CQADAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGG 336

Query: 409 NK-SAGG-GKHMGSELVQRVAINDIAE--SIMAFNTNYKDTGLF 528
              SAGG GK M S L  RV +N   +  +  AF++ Y +TGLF
Sbjct: 337 GSFSAGGPGKGMYSRLYLRV-LNQYPQIHAFSAFSSIYNNTGLF 379

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>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
 Frame = +1

Query: 52  LGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTD 231
           L  P+      +  +  + L +++  ++TA+RMV+ A+G V+H+++++ A+ L   LP  
Sbjct: 226 LASPLYAPESALDRLNGELLEEFMTENFTAARMVLAASG-VEHEELLKVAEPLTSDLPNV 284

Query: 232 P---TTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASW-TDPDSIALMVMQTML 399
           P      +  V       TG E            FAVAF    W  + +++   V+Q ++
Sbjct: 285 PPQLAPKSQYVGGDFRQHTGGEA---------THFAVAFEVPGWNNEKEAVTATVLQMLM 335

Query: 400 GSWNK-SAGG-GKHMGSELVQRVAINDIAE--SIMAFNTNYKDTGLF 528
           G     SAGG GK M S L +RV +N+  E  S  AF + + DTGLF
Sbjct: 336 GGGGSFSAGGPGKGMHSWLYRRV-LNEYQEVQSCTAFTSIFNDTGLF 381

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>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)|
          Length = 412

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
 Frame = +1

Query: 52  LGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTD 231
           LG+ ILG+A  + + TK+   ++I  +Y A+ + ++ AG + HD IV  A++LF +L   
Sbjct: 155 LGKSILGTAKTLATFTKEHFFNFIDKYYNAANLYLSIAGNIDHDKIVIIAEQLFSSLKQG 214

Query: 232 PTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSWN 411
             ++ +     PA + G     I+ ++      + F G S+ + + +    + +++    
Sbjct: 215 VKSSFI-----PAKYIGGN-GFINKELEQTSLVLGFEGTSYINLEKLYQTHLLSII---- 264

Query: 412 KSAGGGKHMGSELVQRVAIN-DIAESIMAFNTNYKDTGLF 528
              GGG  M S L Q +     +A ++ ++N+ Y D+G+F
Sbjct: 265 --FGGG--MSSRLFQSIREKLGLAYAVGSYNSAYFDSGVF 300

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>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit|
           2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2)
          Length = 499

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
 Frame = +1

Query: 49  SLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPT 228
           +L  P+      +  +T + L +++  +YTASRMV+ A+G V H+++++  + L   LP 
Sbjct: 221 ALANPLYAPESAITGLTGEVLENFVFENYTASRMVLAASG-VDHEELLKVVEPLLSDLPN 279

Query: 229 DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASW-TDPDSIALMVMQTMLGS 405
            P       A+  + + G + R          FA+AF    W  + ++I   V+Q ++G 
Sbjct: 280 VPRP-----AEPKSQYVGGDFR-QHTGGEATHFALAFEVPGWNNEKEAIIATVLQMLMGG 333

Query: 406 WNK-SAGG-GKHMGSELVQRVA-INDIAESIMAFNTNYKDTGLF 528
               SAGG GK M S L  R+   +   +S  AF + + +TGLF
Sbjct: 334 GGSFSAGGPGKGMHSWLYLRLLNQHQQFQSCTAFTSVFNNTGLF 377

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>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)|
          Length = 412

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
 Frame = +1

Query: 10  LYSXSPATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDI 189
           +Y     T ++   LG+ ILG+   + + TK+  +++I  HY A  + ++ AG ++H+ I
Sbjct: 141 IYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAENLYLSIAGNIEHNKI 200

Query: 190 VQQAKELFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDS 369
           V  A+ELF +L     ++ +     PA + G +   I  ++      + F   S+ +   
Sbjct: 201 VMIAEELFASLKQGVKSSFI-----PAKYIGGK-GFIHKELEQTSLVLGFECTSYINLGQ 254

Query: 370 IALMVMQTMLGSWNKSAGGGKHMGSELVQRVAIN-DIAESIMAFNTNYKDTGLF 528
           +    + +++       GGG  M S L Q +     +A  + ++N+ Y D+G+F
Sbjct: 255 LYQTYLLSII------FGGG--MSSRLFQSIREKLGLAYVVGSYNSAYFDSGVF 300

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>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
 Frame = +1

Query: 34  AFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQA-KEL 210
           AF+  ++G       +N+  I ++ L  Y++N+YT  RMV+   G V+H+ +V+ A K L
Sbjct: 212 AFRENTVGLHRFCPVENIAKIDREVLHSYLKNYYTPDRMVLAGVG-VEHEHLVECARKYL 270

Query: 211 FKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDM-----------PLAQFAVAFNGASWT 357
               P       + V +  A +TG  ++ ++ DM            L    V     S+ 
Sbjct: 271 VGAEPAWGAPGTVDVDRSVAQYTGGIIK-VERDMSNVSLGPTPIPELTHIMVGLESCSFL 329

Query: 358 DPDSIALMVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNT-----NYKDTG 522
           + D I   V+  M+G     + GG   G  +  R+ +N +      +N      +Y+DTG
Sbjct: 330 EDDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTG 387

Query: 523 L 525
           L
Sbjct: 388 L 388

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>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 525

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
 Frame = +1

Query: 34  AFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQA-KEL 210
           A++  ++G       +NV  I ++ L  Y++N+YT  RMV+   G V+H+ +V  A K L
Sbjct: 213 AYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGVG-VEHEHLVDCARKYL 271

Query: 211 FKTLPTDPTTTNMLVAKQPAIFTG---------SEVRIIDDDMP-LAQFAVAFNGASWTD 360
               P   +   + + +  A +TG         S V +    +P L    V     S+ +
Sbjct: 272 LGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLE 331

Query: 361 PDSIALMVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNT-----NYKDTGL 525
            D I   V+  M+G     + GG   G  +  R+ +N +      +N      +Y+DTGL
Sbjct: 332 EDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGL 389

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>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
 Frame = +1

Query: 49  SLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPT 228
           +L  P+      +  IT ++L  ++QNH+T++RM +   G V H  +++Q  E F  +  
Sbjct: 185 ALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLG-VSH-SVLKQVAEQFLNM-- 240

Query: 229 DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSW 408
                 + +A   A + G E+R  + D  L   A+    A+  + ++ A  V+Q +LG+ 
Sbjct: 241 ---RGGLGLAGAKAKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA- 295

Query: 409 NKSAGGGKHMGSELVQRVAINDIAE-SIMAFNTNYKDTGLF 528
                 G +  S L Q VA        + AFN +Y D+GLF
Sbjct: 296 GPHIKRGNNTTSLLSQSVAKGSHQPFDVSAFNASYSDSGLF 336

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>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 525

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
 Frame = +1

Query: 34  AFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQA-KEL 210
           A++  ++G       +N+  I ++ L  Y++N+YT  RMV+   G V+H+ +V  A K L
Sbjct: 213 AYRENTVGLHRFCPTENIAKINREVLHSYLRNYYTPDRMVLAGVG-VEHEHLVDCARKYL 271

Query: 211 FKTLPTDPTTTNMLVAKQPAIFTG---------SEVRIIDDDMP-LAQFAVAFNGASWTD 360
               P   +   + + +  A +TG         S V +    +P L    V     S+ +
Sbjct: 272 LGIQPAWGSAEAVDIDRSVAQYTGGIAKRERDMSNVSLGPTPIPELTHIMVGLESCSFLE 331

Query: 361 PDSIALMVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNT-----NYKDTGL 525
            D I   V+  M+G     + GG   G  +  R+ +N +      +N      +Y+DTGL
Sbjct: 332 EDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGL 389

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>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
 Frame = +1

Query: 85  VKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPTTTNMLVAKQ 264
           +  +T  +L DY+QNH+T++RM +   G V H  +++Q  E F  +        + ++  
Sbjct: 197 IGKVTPVELHDYVQNHFTSARMALIGLG-VSH-PVLKQVAEQFLNI-----RGGLGLSGA 249

Query: 265 PAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSWNKSAGGGKHMGS 444
            A + G E+R  + D  L   A+    A+    ++ A  V+Q +LG+       G +  S
Sbjct: 250 KAKYHGGEIREQNGD-SLVHAALVAESAAIGSAEANAFSVLQHVLGA-GPHVKRGSNATS 307

Query: 445 ELVQRVAIN-DIAESIMAFNTNYKDTGLF 528
            L Q VA        + AFN +Y D+GLF
Sbjct: 308 SLYQAVAKGVHQPFDVSAFNASYSDSGLF 336

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>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 452

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
 Frame = +1

Query: 49  SLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPT 228
           +L  P+      +  IT ++L  ++QNH+T++RM +   G V H  I+++  E F  +  
Sbjct: 184 ALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLG-VSH-SILKEVAEQFLNI-- 239

Query: 229 DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSW 408
                 + +A   A + G E+R  + D  L   A+    A+  + ++ A  V+Q +LG+ 
Sbjct: 240 ---RGGLGLAGAKAKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA- 294

Query: 409 NKSAGGGKHMGSELVQRVAINDIAE-SIMAFNTNYKDTGLF 528
                 G +  S L Q VA        + AFN +Y D+GLF
Sbjct: 295 GPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLF 335

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>Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4.99.-)|
          Length = 438

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 25/62 (40%), Positives = 35/62 (56%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A  F    +GRP++GSA +V  +T+  L  +    YT  RMV+ AAG V HD +V   +E
Sbjct: 157 AALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVALVRE 216

Query: 208 LF 213
            F
Sbjct: 217 HF 218

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>Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (EC 3.4.99.-)|
          Length = 438

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 25/62 (40%), Positives = 35/62 (56%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A  F    +GRP++GSA +V  +T+  L  +    YT  RMV+ AAG V HD +V   +E
Sbjct: 157 AALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAGNVDHDGLVALVRE 216

Query: 208 LF 213
            F
Sbjct: 217 HF 218

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>YMXG_BACSU (Q04805) Hypothetical zinc protease ymxG (EC 3.4.99.-) (ORFP)|
          Length = 409

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
 Frame = +1

Query: 49  SLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPT 228
           SLG PILG+ + + S     L  Y+ ++YT  R+VI+ AG +  D  ++  ++ F +   
Sbjct: 151 SLGYPILGTEETLASFNGDSLRQYMHDYYTPDRVVISVAGNIS-DSFIKDVEKWFGSYEA 209

Query: 229 DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSW 408
               T +   ++P   T    R  + +   A   + F G          L+V+  +LG  
Sbjct: 210 KGKATGL---EKPEFHTEKLTRKKETEQ--AHLCLGFKGLEVGHERIYDLIVLNNVLGG- 263

Query: 409 NKSAGGGKHMGSELVQRVAIN-DIAESIMAFNTNYKDTGL 525
                    M S L Q V  +  +A S+ +++++Y+D+G+
Sbjct: 264 --------SMSSRLFQDVREDKGLAYSVYSYHSSYEDSGM 295

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>Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)|
          Length = 445

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A  F    +GRP++G+ ++V ++T+  L  +    YT  RMV+  AG V HD++V   +E
Sbjct: 164 AALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERMVVAVAGNVDHDEMVALVRE 223

Query: 208 LFKT------LPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDS 369
            F +          P  +   +   PA+  G      D +       V   G SW     
Sbjct: 224 HFGSRLIRGRQSAPPRKSTGRINGGPALTLGKR----DAEQTHVLLGVRTPGRSW--EHR 277

Query: 370 IALMVMQTMLG 402
            AL V+ T LG
Sbjct: 278 WALSVLHTALG 288

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>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 474

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 51/179 (28%), Positives = 71/179 (39%), Gaps = 12/179 (6%)
 Frame = +1

Query: 28  ATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKE 207
           A AF    LG  I       +++T   + +Y   +   SRMV+   G V H ++V    +
Sbjct: 156 AVAFGGRGLGNSIFCEPQRARNMTSDTIREYFATYLHPSRMVVAGTG-VAHAELVDLVSK 214

Query: 208 LFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMP--------LAQFAVAFNGASWTDP 363
            F    T   ++      + A   GS   +I    P        L    VAF    +T P
Sbjct: 215 AFVPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTHPNYEQTLTHVQVAFPVPPFTHP 274

Query: 364 DSIALMVMQTMLGSWNK-SAGG-GKHMGSELVQRVAINDI--AESIMAFNTNYKDTGLF 528
           D   +  +Q ++G     SAGG GK M S L   V +N     ES  AF   Y  T LF
Sbjct: 275 DMFPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNV-LNRYRWMESCAAFQHAYSSTSLF 332

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>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
 Frame = +1

Query: 49  SLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPT 228
           +L  P+      +  +T ++L  ++QNH+T++RM +   G V H  +++Q  E F  +  
Sbjct: 185 ALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMALIGLG-VSH-PVLKQVAEQFLNM-- 240

Query: 229 DPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLGSW 408
                 + ++   A + G E+R  + D  L   A     A     ++ A  V+Q +LG+ 
Sbjct: 241 ---RGGLGLSGAKANYRGGEIREQNGD-SLVHAAFVAESAVAGSAEANAFSVLQHVLGA- 295

Query: 409 NKSAGGGKHMGSELVQRVA-INDIAESIMAFNTNYKDTGLF 528
                 G +  S L Q VA        + AFN +Y D+GLF
Sbjct: 296 GPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLF 336

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>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 577

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
 Frame = +1

Query: 262 QPAIFTGSEVRIIDDDMPL-------AQFAVAFNGASWTDPDSIALMVMQTMLGSWNK-S 417
           +PA +TG  + +     PL           +AF G + +D D  AL  +QT+LG     S
Sbjct: 331 RPAHYTGGFLTLPSQPPPLNPNLPTFTHIQLAFEGLAISDDDIYALATLQTLLGGGGSFS 390

Query: 418 AGG-GKHMGSELVQRVA-INDIAESIMAFNTNYKDTGLF 528
           AGG GK M S L   V   +   ES +AFN +Y D+GLF
Sbjct: 391 AGGPGKGMYSRLYTNVLNQHGWVESCVAFNHSYTDSGLF 429

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>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
 Frame = +1

Query: 34  AFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQA-KEL 210
           AF+  ++G       +N+  I ++ L  Y++N+YT  RMV+   G V+H+ +V+ A K L
Sbjct: 212 AFRENTVGLHRFCPVENIGKIDREVLHSYLKNYYTPDRMVLAGVG-VEHEHLVECARKYL 270

Query: 211 FKTLPT--DPTTTNMLVAKQPAIFTGSE-----VRIIDDDMPLAQFAVAFNGAS---WTD 360
               P    P    ML A+  +   GS       ++     P  Q +  + GA      +
Sbjct: 271 LGVQPAWGAPGAVWMLTAQWHSTRGGSSRWRETCQMSALRPPRFQSSHIYGGARELLLLE 330

Query: 361 PDSIALMVMQTMLGSWNKSAGGGKHMGSELVQRVAINDIAESIMAFNT-----NYKDTGL 525
            D I   V+  M+G     + GG   G  +  R+ +N +      +N      +Y+DTGL
Sbjct: 331 EDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGL 388

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>Y4WB_RHISN (P55680) Hypothetical zinc protease-like protein y4wB|
          Length = 447

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 27/111 (24%), Positives = 49/111 (44%)
 Frame = +1

Query: 70  GSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPTTTNM 249
           G+   + ++T  DL    +  +    + I   GA+    + +    +F  LP  P+ T +
Sbjct: 191 GTVQTLAAVTTSDLKAVHERIFARGNLTIAVVGAIDPGTLKRDLDRIFGGLPAGPSLTPV 250

Query: 250 LVAKQPAIFTGSEVRIIDDDMPLAQFAVAFNGASWTDPDSIALMVMQTMLG 402
           + A       G  +R+  D +P AQ ++A+ G    DP   A  +M  +LG
Sbjct: 251 VDAVPKL---GRAIRVAYD-LPQAQLSLAYPGIPRKDPQFFAANLMNQILG 297

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>YP183_YEAST (Q08924) WD-repeat protein YPL183C|
          Length = 1013

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
 Frame = -1

Query: 507 VCVECH--YTLSYVIDCYSLYKL---RTHVLPSSSTLVPGT-KHGLHNH*CNRIGICPGC 346
           VC   H  + L+ + D + L  +   R H+    +++VP T ++G+H      I ICP  
Sbjct: 607 VCGGSHRLWNLAKITDGHVLMYIKASRFHLRKIYNSIVPETLENGVHGREIRDISICPVS 666

Query: 345 SIEGNSKLSKGHVIINDSYLRTSKNGWLLSNQHVGCCRVSW 223
           +   N     GH+    S   T K G+   N   G  +  W
Sbjct: 667 NTNTNDNFKDGHIFCTASEDTTIKLGYF--NNRTGKVQNFW 705

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>YPD1_CAEEL (P48053) Hypothetical protein C05D11.1 in chromosome III|
          Length = 995

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 88  KSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQ 195
           +S T + + DY +  Y  S MV+T  G V HD +++
Sbjct: 193 ESCTLEKVRDYHKKFYHLSNMVVTVCGMVDHDQVLE 228

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>C4BP_HUMAN (P04003) C4b-binding protein alpha chain precursor (C4bp)|
           (Proline-rich protein) (PRP)
          Length = 597

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 488 ILSAMSLIATLCTSSEPMCFPPPALLFQEPSMVCITINAIESGS 357
           IL  M+LIA L  +    C PPP L F  P  + +T    ++G+
Sbjct: 32  ILFQMTLIAALLPAVLGNCGPPPTLSFAAPMDITLTETRFKTGT 75

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>GATE_THEVO (Q979L9) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)|
           (Glu-ADT subunit E)
          Length = 598

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +1

Query: 25  PATAFQYTSLGRPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAK 204
           P T     ++ + IL  +D +KS+  +DLV  I   Y  S+ V   A ++  D  +Q+ +
Sbjct: 418 PETDIPVIAVSKDILQKSDKIKSVGFEDLVSSIITKYGISKQV---AESLASDMKIQELE 474

Query: 205 EL 210
           EL
Sbjct: 475 EL 476

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>FIMD_SALTY (P37924) Outer membrane usher protein fimD precursor|
          Length = 870

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
 Frame = +1

Query: 301 DDDMPLAQFAVAFNGASWTDPDSIALMVMQTML---------GSWNKSAGGGKH 435
           D+ +P A    +F G+  TD DS  L ++  +          G+WN S G G H
Sbjct: 175 DEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYH 228

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>LEU1_CORGL (P42455) 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
          Length = 616

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = +1

Query: 100 KKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPTTTNMLVAKQPAIFT 279
           K  +V +  +     R V+     V+   +   A EL KT+  D   TN      P  FT
Sbjct: 157 KNVIVHFYNSTSILQRNVVFRMDKVQVKKLATDAAELIKTIAQDYPDTNWRWQYSPESFT 216

Query: 280 GSEV 291
           G+EV
Sbjct: 217 GTEV 220

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>CRBB2_CHICK (Q05714) Beta crystallin B2 (BP)|
          Length = 218

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 187 IVQQAKELFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMP 315
           +V+  ++   T  T  +  + +V  +   FTG ++ IIDDD+P
Sbjct: 101 VVRAPRQPLPTRQTKDSQEHKIVLYENPSFTGKKIEIIDDDVP 143

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>NEO1_MOUSE (P97798) Neogenin precursor|
          Length = 1493

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 458 LCTSSEPMCFPPPALLFQEPSMVCITINAIESGSVQDAP 342
           LCTSS   C PPP LL   P ++ +   A  + + +  P
Sbjct: 11  LCTSSSRRCCPPPPLLLLLPLLLLLGRPASGAAATKSGP 49

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>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor|
          Length = 1025

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +1

Query: 58  RPILGSADNVKSITKKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPT 237
           +P     D VKS TK+ + +    +Y   R ++  AGA+ + D V    E+ + L   P+
Sbjct: 52  KPYGALVDKVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEV----EIIRGLTRMPS 107

Query: 238 TTNMLVAKQPAI 273
             + L A   A+
Sbjct: 108 GRDELKASVDAV 119

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>AROC_YEAST (P28777) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 376

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 415 SAGGGKHMGSELVQRVAINDIAESIMAFNTN 507
           S+GGG+    E + RVA   IAE  +A N+N
Sbjct: 118 SSGGGRASARETIGRVASGAIAEKFLAQNSN 148

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>SCPDH_ARATH (Q8LGI2) Probable mitochondrial saccharopine dehydrogenase|
           At5g39410 (EC 1.5.1.9) (SDH)
          Length = 454

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 23/84 (27%), Positives = 37/84 (44%)
 Frame = +1

Query: 148 MVITAAGAVKHDDIVQQAKELFKTLPTDPTTTNMLVAKQPAIFTGSEVRIIDDDMPLAQF 327
           MVI  A       +V++A +  +T  + P  +  L  + P   T S       + P +  
Sbjct: 13  MVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAARPNPPPS-- 70

Query: 328 AVAFNGASWTDPDSIALMVMQTML 399
           +VA   A  +DPDS+  +  QT L
Sbjct: 71  SVAILTADTSDPDSLRRLCTQTKL 94

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>PVG1_SCHPO (Q9UT27) Pyruvyltransferase 1 precursor (EC 2.-.-.-) (Pyruvylated|
           Gal-beta-1,3-epitope synthesis protein 1) (PvGal
           synthesis protein 1)
          Length = 401

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = +1

Query: 73  SADNVKSIT-KKDLVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPTTTNM 249
           SA    +IT + +L+     HY A    +   G   H +    A  + +    D     +
Sbjct: 65  SASCESTITLQSNLLFTYYKHYFAGIKKVALIGFPDHPNKGDSAIYVAEKKLLDALNIEV 124

Query: 250 L-VAKQPAIFTGSEVRIIDDDMPLAQFAVAFNG 345
           + +  Q A ++ SE++ I  D+P  +FA+AF+G
Sbjct: 125 VYITAQEADYSASELKSIISDIPRDEFALAFHG 157

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>CARA_LACLA (Q9CF80) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 357

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = +1

Query: 76  ADNVKSITKKD---LVDYIQNHYTASRMVITAAGAVKHDDIVQQAKELFKTLPTDPTTTN 246
           A N+  IT  D   +   ++ H T    ++ A   V+H     QA      LPT+   T+
Sbjct: 103 AKNIPGITGVDTRAITKIVREHGTMKASLVQARDEVEHQMSQLQAT----VLPTNQVETS 158

Query: 247 MLVAKQPAIFTGSEVRIID 303
                 P+  TG +V ++D
Sbjct: 159 STTTAYPSPNTGRKVVVVD 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.131    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,388,629
Number of Sequences: 219361
Number of extensions: 1523270
Number of successful extensions: 4364
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 4223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4333
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result