ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15f22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82148.1|TAVDAC3 T.aestivum VDAC3 mRNA for voltage dependent anion channel Length = 1208 Score = 924 bits (466), Expect = 0.0 Identities = 553/578 (95%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 184 ggcgtcgcaatcacagctgcaggaactaggaaaaacgagtctatctttggcgagcttcag 243 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 303 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 304 ctgacaacattcacagttgacgagtttgcaactccagggctgaaatcaatcctcagtttg 363 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 364 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccggt 423 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 424 atcaatgcaagtgttgggctgaacccgaaccctatggttaacctttctggtgtattcgga 483 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 484 agcaaagaactgtcagttggtgttgatgtttcatttgacacggcaactagcaatttcacc 543 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 544 aagtacaacgctgctttaagcctcacgtatccggatcttattgcctcactccacctgaac 603 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagt-cacattcaagcac 500 ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct: 604 aatcacggtgacaccttgactgcgtcttactaccacttagtaaagtacac-ttctagcac 662 Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgg 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 cgctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgg 722 Query: 561 atcgcagcactcattggacccgcacacccagtgtgaag 598 ||| |||||||||||||||||||||| ||||||||||| Sbjct: 723 atcacagcactcattggacccgcaca-ccagtgtgaag 759
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 464 bits (234), Expect = e-127 Identities = 483/566 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 |||||| | |||||||||||||| || |||||||| ||||| ||||||| ||||| || Sbjct: 106 ggcgtcactatcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaa 165 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| Sbjct: 166 acccagcttaagaacaagaaattgactgttgatgtcaaagcaaactcagagtccgatctt 225 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||| Sbjct: 226 ttaacaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttg 285 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 || |||||||||||||||||||||||||||||||||||||| || ||||||| || | Sbjct: 286 gtagttccagaccagaggtcagggaagcttgaactccagtaccttcatgaatatgctggc 345 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | |||||||||||||| ||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 346 atcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgtctttgga 405 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 |||||||| || |||||||||||||| ||| |||| ||||| || |||||||||||||| Sbjct: 406 agcaaagagctctcagttggtgttgatgttgcattcgacactgcgactagcaatttcacc 465 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||||||||| || || || | || | || ||||||||||| || || |||||| Sbjct: 466 aagtacaatgctgcattgagtctaaccaattcagaccttattgcttctctgcatctgaac 525 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 ||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | |||| Sbjct: 526 aatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaacact 585 Query: 502 gctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgga 561 || || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| ||||| Sbjct: 586 gccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctttggg 645 Query: 562 tcgcagcactcattggacccgcacac 587 || ||||||||||||||||| ||||| Sbjct: 646 tcccagcactcattggaccctcacac 671
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 464 bits (234), Expect = e-127 Identities = 483/566 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 |||||| | |||||||||||||| || |||||||| ||||| ||||||| ||||| || Sbjct: 179 ggcgtcactatcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaa 238 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| Sbjct: 239 acccagcttaagaacaagaaattgactgttgatgtcaaagcaaactcagagtccgatctt 298 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||| Sbjct: 299 ttaacaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttg 358 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 || |||||||||||||||||||||||||||||||||||||| || ||||||| || | Sbjct: 359 gtagttccagaccagaggtcagggaagcttgaactccagtaccttcatgaatatgctggc 418 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | |||||||||||||| ||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 419 atcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgtctttgga 478 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 |||||||| || |||||||||||||| ||| |||| ||||| || |||||||||||||| Sbjct: 479 agcaaagagctctcagttggtgttgatgttgcattcgacactgcgactagcaatttcacc 538 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||||||||| || || || | || | || ||||||||||| || || |||||| Sbjct: 539 aagtacaatgctgcattgagtctaaccaattcagaccttattgcttctctgcatctgaac 598 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 ||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | |||| Sbjct: 599 aatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaacact 658 Query: 502 gctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgga 561 || || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| ||||| Sbjct: 659 gccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctttggg 718 Query: 562 tcgcagcactcattggacccgcacac 587 || ||||||||||||||||| ||||| Sbjct: 719 tcccagcactcattggaccctcacac 744
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 464 bits (234), Expect = e-127 Identities = 483/566 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 |||||| | |||||||||||||| || |||||||| ||||| ||||||| ||||| || Sbjct: 184 ggcgtcactatcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaa 243 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| Sbjct: 244 acccagcttaagaacaagaaattgactgttgatgtcaaagcaaactcagagtccgatctt 303 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||| Sbjct: 304 ttaacaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttg 363 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 || |||||||||||||||||||||||||||||||||||||| || ||||||| || | Sbjct: 364 gtagttccagaccagaggtcagggaagcttgaactccagtaccttcatgaatatgctggc 423 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | |||||||||||||| ||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 424 atcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgtctttgga 483 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 |||||||| || |||||||||||||| ||| |||| ||||| || |||||||||||||| Sbjct: 484 agcaaagagctctcagttggtgttgatgttgcattcgacactgcgactagcaatttcacc 543 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||||||||| || || || | || | || ||||||||||| || || |||||| Sbjct: 544 aagtacaatgctgcattgagtctaaccaattcagaccttattgcttctctgcatctgaac 603 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 ||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | |||| Sbjct: 604 aatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaacact 663 Query: 502 gctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgga 561 || || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| ||||| Sbjct: 664 gccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctttggg 723 Query: 562 tcgcagcactcattggacccgcacac 587 || ||||||||||||||||| ||||| Sbjct: 724 tcccagcactcattggaccctcacac 749
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 464 bits (234), Expect = e-127 Identities = 483/566 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 |||||| | |||||||||||||| || |||||||| ||||| ||||||| ||||| || Sbjct: 239 ggcgtcactatcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaa 298 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| Sbjct: 299 acccagcttaagaacaagaaattgactgttgatgtcaaagcaaactcagagtccgatctt 358 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||| Sbjct: 359 ttaacaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttg 418 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 || |||||||||||||||||||||||||||||||||||||| || ||||||| || | Sbjct: 419 gtagttccagaccagaggtcagggaagcttgaactccagtaccttcatgaatatgctggc 478 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | |||||||||||||| ||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 479 atcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgtctttgga 538 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 |||||||| || |||||||||||||| ||| |||| ||||| || |||||||||||||| Sbjct: 539 agcaaagagctctcagttggtgttgatgttgcattcgacactgcgactagcaatttcacc 598 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||||||||| || || || | || | || ||||||||||| || || |||||| Sbjct: 599 aagtacaatgctgcattgagtctaaccaattcagaccttattgcttctctgcatctgaac 658 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 ||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | |||| Sbjct: 659 aatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaacact 718 Query: 502 gctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgga 561 || || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| ||||| Sbjct: 719 gccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctttggg 778 Query: 562 tcgcagcactcattggacccgcacac 587 || ||||||||||||||||| ||||| Sbjct: 779 tcccagcactcattggaccctcacac 804
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 456 bits (230), Expect = e-125 Identities = 482/566 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 |||||| | |||||||||||||| || ||||| || ||||| ||||||| ||||| || Sbjct: 195 ggcgtcactatcacagctgcaggaacaaggaacaatgagtctgtctttggtgagctccaa 254 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| Sbjct: 255 acccagcttaagaacaagaaattgactgttgatgtcaaagcaaactcagagtccgatctt 314 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||| Sbjct: 315 ttaacaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttg 374 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 || |||||||||||||||||||||||||||||||||||||| || ||||||| || | Sbjct: 375 gtagttccagaccagaggtcagggaagcttgaactccagtaccttcatgaatatgctggc 434 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 | |||||||||||||| ||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 435 atcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgtctttgga 494 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 |||||||| || |||||||||||||| ||| |||| ||||| || |||||||||||||| Sbjct: 495 agcaaagagctctcagttggtgttgatgttgcattcgacactgcgactagcaatttcacc 554 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||||||||| || || || | || | || ||||||||||| || || |||||| Sbjct: 555 aagtacaatgctgcattgagtctaaccaattcagaccttattgcttctctgcatctgaac 614 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 ||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | |||| Sbjct: 615 aatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaacact 674 Query: 502 gctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatttgga 561 || || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| ||||| Sbjct: 675 gccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctttggg 734 Query: 562 tcgcagcactcattggacccgcacac 587 || ||||||||||||||||| ||||| Sbjct: 735 tcccagcactcattggaccctcacac 760
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 422 bits (213), Expect = e-115 Identities = 432/505 (85%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 ||||||||||||||||| ||||| || |||||||| ||||| |||||||| |||||||| Sbjct: 237 ggcgtcgcaatcacagccgcaggaacaaggaaaaatgagtccatctttggtgagcttcac 296 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||| Sbjct: 297 acccagattaagaacaagaaattgacagttgatgtcaaagcaaactcagaatcagatctt 356 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 |||||||| |||| || |||||||||| ||||||||||| ||||||||| ||| ||| Sbjct: 357 ttgacaacaatcactgtcgatgagtttggtactccagggctaaaatcaattatcaatttg 416 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 ||||||||||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 417 gttgttccagaccagaggtcagggaagcttgaattccagtacctacatgaatatgctggt 476 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 ||||||||||| || ||||| || ||| ||||||||||||||||||||||| || ||| Sbjct: 477 gtgaatgcaagcgtcgggcttaattccaaccctatggttaacctttctggtgcctttgga 536 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 ||||||| ||||||||| || ||||| || |||||||| ||||| |||||| ||||||| Sbjct: 537 agcaaagcactatcagtcggcgttgatgtctcatttgatacggcgactagcgatttcacc 596 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||| ||||| | |||||| | ||| |||||||||||||| || || ||||| Sbjct: 597 aagtacaacgctgccctgagcctcaccagtccagatcttattgcttcccttcatctgaat 656 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 || || ||||| ||| || ||||||| ||||||||||| |||||| |||||| ||||| Sbjct: 657 aaccacggtgataccctggctgcgtcctactaccacttggtaaagaaccattcaggcact 716 Query: 502 gctgttggagcagagctgtcccaca 526 ||||||||||| ||| |||| |||| Sbjct: 717 gctgttggagctgagttgtctcaca 741
>emb|X73429.1|ZMPOR1 Z.mays mRNA for porin Length = 1810 Score = 375 bits (189), Expect = e-100 Identities = 426/505 (84%) Strand = Plus / Plus Query: 22 ggcgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcag 81 ||||||||||||||||| ||||| || |||||||| ||||| |||||||| |||||||| Sbjct: 117 ggcgtcgcaatcacagccgcaggaacaaggaaaaatgagtccatctttggtgagcttcac 176 Query: 82 acccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatctt 141 |||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||| Sbjct: 177 acccagattaagaacaagaaattgacagttgatgtcaaagcaaactcagaatcagatctt 236 Query: 142 ctgacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttg 201 | |||||| |||| ||||||||||| | ||||||||||| ||||||||| ||| ||| Sbjct: 237 ttaacaacaatcactgttgatgagttcggtactccagggctaaaatcaattatcaatttg 296 Query: 202 gttgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagt 261 ||||||||||||||||||||||||||||||||| |||| || || ||||||| || || Sbjct: 297 gttgttccagaccagaggtcagggaagcttgaattccaatacctacatgaatatgctggt 356 Query: 262 gtgaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcgga 321 ||||||||||| || ||||| || ||| |||||||||||||||||||||| || ||| Sbjct: 357 gtgaatgcaagcgtcgggcttaattccaatcctatggttaacctttctggtgcctttgga 416 Query: 322 agcaaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcact 381 ||||||| ||| ||||| || ||||| || |||||||| ||||| |||||| ||||||| Sbjct: 417 agcaaagcactctcagtcggcgttgatgtctcatttgatacggcgactagcgatttcacc 476 Query: 382 aagtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaac 441 |||||||| ||||| | |||||| | ||| |||||||||||||| || || ||||| Sbjct: 477 aagtacaacgctgccctgagcctcaccagtccagatcttattgcttcccttcatctgaat 536 Query: 442 aatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcact 501 || || ||||| ||| || |||||| ||||||||| | |||||| |||||| ||||| Sbjct: 537 aaccacggtgataccctggttgcgtcctactaccacctggtaaagaaccattcaggcact 596 Query: 502 gctgttggagcagagctgtcccaca 526 ||||||||||| ||| |||| |||| Sbjct: 597 gctgttggagctgagttgtctcaca 621
>gb|AY109870.1| Zea mays CL2099_1 mRNA sequence Length = 1799 Score = 341 bits (172), Expect = 2e-90 Identities = 419/503 (83%) Strand = Plus / Plus Query: 24 cgtcgcaatcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcagac 83 ||||||||||||||| ||||| || ||| ||||| |||||||| |||||||| || Sbjct: 119 cgtcgcaatcacagccgcaggaacaaggnnnnntgagtccatctttggtgagcttcacac 178 Query: 84 ccagcttaagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatcttct 143 |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||| | Sbjct: 179 ccagattaagaacaagaaattgacagttgatgtcaaagcaaactcagaatcagatctttt 238 Query: 144 gacaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttggt 203 |||||| |||| ||||||||||| | ||||||||||| ||||||||| ||| ||||| Sbjct: 239 aacaacaatcactgttgatgagttcggtactccagggctaaaatcaattatcaatttggt 298 Query: 204 tgttccagaccagaggtcagggaagcttgaactccagtatctccatgaattcgccagtgt 263 ||||||||||||||||||||||||||||||| |||| || || ||||||| || |||| Sbjct: 299 tgttccagaccagaggtcagggaagcttgaattccaatacctacatgaatatgctggtgt 358 Query: 264 gaatgcaagtgttgggctgaaccccagccctatggttaacctttctggtgtattcggaag 323 ||||||||| || ||||| || ||| |||||||||||||||||||||| || ||||| Sbjct: 359 gaatgcaagcgtcgggcttaattccaatcctatggttaacctttctggtgcctttggaag 418 Query: 324 caaagaactatcagttggtgttgacgtttcatttgacacggcaactagcaatttcactaa 383 ||||| ||| ||||| || ||||| || |||||||| ||||| |||||| ||||||| || Sbjct: 419 caaagcactctcagtcggcgttgatgtctcatttgatacggcgactagcgatttcaccaa 478 Query: 384 gtacaatgctgctttaagcctcgcatatccggatcttattgcttcactccacctgaacaa 443 |||||| ||||| | |||||| | ||| |||||||||||||| || || ||||| || Sbjct: 479 gtacaacgctgccctgagcctcaccagtccagatcttattgcttcccttcatctgaataa 538 Query: 444 tcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaagcactgc 503 || ||||| ||| || |||||| ||||||||| | |||||| |||||| ||||||| Sbjct: 539 ccacggtgataccctggttgcgtcctactaccacctggtaaagaaccattcaggcactgc 598 Query: 504 tgttggagcagagctgtcccaca 526 ||||||||| ||| |||| |||| Sbjct: 599 tgttggagctgagttgtctcaca 621
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 145 bits (73), Expect = 2e-31 Identities = 145/169 (85%) Strand = Plus / Minus Query: 227 agcttgaactccagtatctccatgaattcgccagtgtgaatgcaagtgttgggctgaacc 286 |||||||||||||||| || ||||||| || | | |||||||||||||| ||||| Sbjct: 22905342 agcttgaactccagtaccttcatgaatatgctggcatcaatgcaagtgttggcctgaatt 22905283 Query: 287 ccagccctatggttaacctttctggtgtattcggaagcaaagaactatcagttggtgttg 346 ||| ||||||||||||||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 22905282 ccaatcctatggttaacctttctggtgtctttggaagcaaagagctctcagttggtgttg 22905223 Query: 347 acgtttcatttgacacggcaactagcaatttcactaagtacaatgctgc 395 | ||| |||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 22905222 atgttgcattcgacactgcgactagcaatttcaccaagtacaatgctgc 22905174 Score = 123 bits (62), Expect = 7e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 438 gaacaatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaag 497 ||||||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | Sbjct: 22904962 gaacaatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaa 22904903 Query: 498 cactgctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatt 557 |||||| || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| || Sbjct: 22904902 cactgccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctt 22904843 Query: 558 tggatcgcagcactcattggacccgcacac 587 ||| || ||||||||||||||||| ||||| Sbjct: 22904842 tgggtcccagcactcattggaccctcacac 22904813 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 31 atcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcagacccagctt 90 |||||||||||||| || |||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 22905731 atcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaaacccagctt 22905672 Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtc 134 ||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 22905671 aagaacaagaaattgactgttgatgtcaaagcaaactcagagtc 22905628 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 145 acaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttggtt 204 |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||||| Sbjct: 22905515 acaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttggta 22905456 Query: 205 gttccagaccagaggtcagggaag 228 |||||||||||||||||||||||| Sbjct: 22905455 gttccagaccagaggtcagggaag 22905432 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 tggttaacctttctggtgtattcgg 320 ||||||||||||||||||| ||||| Sbjct: 29764407 tggttaacctttctggtgtgttcgg 29764383
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 145 bits (73), Expect = 2e-31 Identities = 145/169 (85%) Strand = Plus / Minus Query: 227 agcttgaactccagtatctccatgaattcgccagtgtgaatgcaagtgttgggctgaacc 286 |||||||||||||||| || ||||||| || | | |||||||||||||| ||||| Sbjct: 108899 agcttgaactccagtaccttcatgaatatgctggcatcaatgcaagtgttggcctgaatt 108840 Query: 287 ccagccctatggttaacctttctggtgtattcggaagcaaagaactatcagttggtgttg 346 ||| ||||||||||||||||||||||| || ||||||||||| || ||||||||||||| Sbjct: 108839 ccaatcctatggttaacctttctggtgtctttggaagcaaagagctctcagttggtgttg 108780 Query: 347 acgtttcatttgacacggcaactagcaatttcactaagtacaatgctgc 395 | ||| |||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 108779 atgttgcattcgacactgcgactagcaatttcaccaagtacaatgctgc 108731 Score = 123 bits (62), Expect = 7e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 438 gaacaatcatggtgacaccttgactgcgtcttactaccacttagtaaagtcacattcaag 497 ||||||||||||||| ||||||| ||| || ||||||||| | |||||| ||||| | Sbjct: 108519 gaacaatcatggtgataccttgattgcatcctactaccacctggtaaagcaccattcgaa 108460 Query: 498 cactgctgttggagcagagctgtcccacaacttcccaaggaacgagagcacattgatatt 557 |||||| || ||||| ||||||||||||| |||| ||||||| ||||||||| |||| || Sbjct: 108459 cactgccgtaggagctgagctgtcccacagcttctcaaggaatgagagcacactgatctt 108400 Query: 558 tggatcgcagcactcattggacccgcacac 587 ||| || ||||||||||||||||| ||||| Sbjct: 108399 tgggtcccagcactcattggaccctcacac 108370 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Minus Query: 31 atcacagctgcagggactaggaaaaacgagtcaatctttggcgagcttcagacccagctt 90 |||||||||||||| || |||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 109288 atcacagctgcaggaacaaggaaaaatgagtctgtctttggtgagctccaaacccagctt 109229 Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtc 134 ||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 109228 aagaacaagaaattgactgttgatgtcaaagcaaactcagagtc 109185 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 145 acaacattcacagttgatgagtttgcaactccagggctcaaatcaattctcagcttggtt 204 |||||| |||| ||||||||||||| |||||||||| | ||||||||||| || ||||| Sbjct: 109072 acaacagtcacggttgatgagtttggaactccagggttgaaatcaattcttagtttggta 109013 Query: 205 gttccagaccagaggtcagggaag 228 |||||||||||||||||||||||| Sbjct: 109012 gttccagaccagaggtcagggaag 108989
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtca 135 |||||||||||| |||| || ||| | |||||||||||||||||| Sbjct: 330 aagaacaagaacatgaccgtagatgtgaaagcaaactcagagtca 374
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 298 gttaacctttctggtgtattcggaa 322 ||||||||||||||||||||||||| Sbjct: 477 gttaacctttctggtgtattcggaa 501
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtca 135 |||||||||||| |||| || ||| | |||||||||||||||||| Sbjct: 325 aagaacaagaacatgaccgtagatgtgaaagcaaactcagagtca 369
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 298 gttaacctttctggtgtattcggaa 322 ||||||||||||||||||||||||| Sbjct: 511 gttaacctttctggtgtattcggaa 535
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.033 Identities = 75/92 (81%) Strand = Plus / Minus Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatcttctgacaaca 150 |||||||||||| |||| | ||| | ||||||||||| |||||| || | | |||||| Sbjct: 923 aagaacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacaaca 864 Query: 151 ttcacagttgatgagtttgcaactccagggct 182 | || ||||||||| ||||||| |||||||| Sbjct: 863 attactgttgatgagattgcaacaccagggct 832
>emb|CT030685.6| Mouse DNA sequence from clone RP24-284M15 on chromosome 9, complete sequence Length = 171996 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 293 ctatggttaacctttctggtgta 315 ||||||||||||||||||||||| Sbjct: 152885 ctatggttaacctttctggtgta 152863
>gb|AF093538.1|AF093538 Zea mays voltage-dependent anion-selective channel protein mRNA, partial cds Length = 321 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 89 ttaagaacaagaacttgacagttgatatcaaagcaaactcagagtca 135 ||||||||| |||| |||| || ||| | |||||||||||||||||| Sbjct: 176 ttaagaacacgaacatgaccgtagatgtgaaagcaaactcagagtca 222
>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence Length = 180378 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 agggctcaaatcaattctcagc 198 |||||||||||||||||||||| Sbjct: 48345 agggctcaaatcaattctcagc 48366
>gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence Length = 176669 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 141496 tggagcagagctgtcccacaac 141517
>gb|AC024159.4|AC024159 Homo sapiens chromosome 3 clone RP11-255K15 map 3p, complete sequence Length = 195544 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 76480 tggagcagagctgtcccacaac 76459
>gb|AC026197.3|AC026197 Homo sapiens chromosome 3 clone RP11-483G20 map 3p, complete sequence Length = 202083 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 145418 tggagcagagctgtcccacaac 145397
>gb|AC020755.3|AC020755 Homo sapiens chromosome 3 clone RP11-3D22 map 3p, complete sequence Length = 166076 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 110421 tggagcagagctgtcccacaac 110400
>gb|AC144600.3| Didelphis virginiana clone LB3-100O6, complete sequence Length = 182571 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 agggctcaaatcaattctcagc 198 |||||||||||||||||||||| Sbjct: 91535 agggctcaaatcaattctcagc 91556
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 agggctcaaatcaattctcagc 198 |||||||||||||||||||||| Sbjct: 934621 agggctcaaatcaattctcagc 934642
>gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p, complete sequence Length = 173370 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 164071 tggagcagagctgtcccacaac 164050
>gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3p, complete sequence Length = 188867 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 507 tggagcagagctgtcccacaac 528 |||||||||||||||||||||| Sbjct: 2200 tggagcagagctgtcccacaac 2179
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 tggttaacctttctggtgtattcgg 320 ||||||||||||||||||| ||||| Sbjct: 506 tggttaacctttctggtgtgttcgg 530
>gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosome 1, complete sequence Length = 153199 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 cccagcttaagaacaagaacttgac 107 |||||||||||||||||||| |||| Sbjct: 79013 cccagcttaagaacaagaacctgac 79037
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 tggttaacctttctggtgtattcgg 320 ||||||||||||||||||| ||||| Sbjct: 8502 tggttaacctttctggtgtgttcgg 8478
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 tggttaacctttctggtgtattcgg 320 ||||||||||||||||||| ||||| Sbjct: 94138 tggttaacctttctggtgtgttcgg 94114
>ref|NM_124121.2| Arabidopsis thaliana unknown protein AT5G47480 mRNA, complete cds Length = 4345 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cagggctcaaatcaattctcagct 199 ||||||||||| |||||||||||| Sbjct: 3523 cagggctcaaaccaattctcagct 3546
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgaga 544 ||||||||||||||||||| | |||| |||| | || ||||||| Sbjct: 600 tgctgttggagcagagctggctcacagcttctcgagcaacgaga 643
>gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete sequence Length = 71353 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ttctgacaacattcacagtt 159 |||||||||||||||||||| Sbjct: 38745 ttctgacaacattcacagtt 38764
>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence Length = 226254 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ccacctgaacaatcatggtg 451 |||||||||||||||||||| Sbjct: 103988 ccacctgaacaatcatggtg 103969
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgaga 544 ||||||||||||||||||| | |||| |||| | || ||||||| Sbjct: 68831 tgctgttggagcagagctggctcacagcttctcgagcaacgaga 68874
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 acagttgatatcaaagcaaa 125 |||||||||||||||||||| Sbjct: 158721 acagttgatatcaaagcaaa 158740
>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE Length = 116514 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gttgacgtttcatttgacac 362 |||||||||||||||||||| Sbjct: 115404 gttgacgtttcatttgacac 115423
>gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, complete sequence Length = 173567 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acagctgcagggactaggaa 53 |||||||||||||||||||| Sbjct: 106050 acagctgcagggactaggaa 106069
>gb|AC004457.1| Homo sapiens PAC clone RP5-1196H5 from 7, complete sequence Length = 128220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caaactcagagtcagatctt 141 |||||||||||||||||||| Sbjct: 3626 caaactcagagtcagatctt 3607
>emb|AL445143.2| Human DNA sequence from clone RP11-172E9 on chromosome 13 Contains a novel gene, complete sequence Length = 148571 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gccagtgtgaatgcaagtgttggg 279 ||||||||||||| |||||||||| Sbjct: 6402 gccagtgtgaatgaaagtgttggg 6379
>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research Institute) complete sequence Length = 212568 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggcgagcttcagacccagct 89 |||||||||||||||||||| Sbjct: 65318 ggcgagcttcagacccagct 65337
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 agaccagaggtcagggaagc 229 |||||||||||||||||||| Sbjct: 64748 agaccagaggtcagggaagc 64767
>gb|AC091150.15| Homo sapiens chromosome 18, clone RP11-735D6, complete sequence Length = 186874 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 caatcatggtgacaccttga 460 |||||||||||||||||||| Sbjct: 123569 caatcatggtgacaccttga 123550
>gb|AC087380.3| Homo sapiens chromosome 11, clone RP11-454O22, complete sequence Length = 200723 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 tcagagtcagatcttctgac 146 |||||||||||||||||||| Sbjct: 99208 tcagagtcagatcttctgac 99189
>gb|AC183493.1| Brassica oleracea Contig B, complete sequence Length = 284024 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cagggctcaaatcaattctcagct 199 |||||||| ||||||||||||||| Sbjct: 61901 cagggctcgaatcaattctcagct 61878
>gb|AC068800.28|AC068800 Homo sapiens 12 BAC RP11-557L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 aggaacgagagcacattgatattt 558 ||||| |||||||||||||||||| Sbjct: 4378 aggaaggagagcacattgatattt 4401
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgaga 544 ||||||||||||||||||| | |||| |||| | || ||||||| Sbjct: 26424140 tgctgttggagcagagctggctcacagcttctcgagcaacgaga 26424183
>gb|AF137396.2|AF137396 Homo sapiens ubiquilin 3, HOR 5'Beta14, HOR5'Beta13, HOR5'Beta12, and HOR5'Beta11 genes, complete cds; HOR 5'Beta10 and HOR5'Beta9 pseudogenes, complete sequence; HOR5'Beta8 and HOR5'Beta7 genes, complete cds; CHR11ORF1 and amphiphysin pseudogenes, complete sequence; HOR5'Beta6 and HOR5'Beta5 genes, complete cds; HOR5'Beta4 pseudogene, complete sequence; HOR 5'Beta3 genes, complete cds; HOR5'Beta2 pseudogene, complete sequence; and HOR 5'Beta1 gene, complete cds Length = 219955 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tcagagtcagatcttctgac 146 |||||||||||||||||||| Sbjct: 59356 tcagagtcagatcttctgac 59375
>gb|AC012305.7| Homo sapiens BAC clone RP11-84G18 from 2, complete sequence Length = 190385 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tgcttcactccacctgaaca 442 |||||||||||||||||||| Sbjct: 49915 tgcttcactccacctgaaca 49934
>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7 Length = 80117 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 cagggctcaaatcaattctcagct 199 ||||||||||| |||||||||||| Sbjct: 22244 cagggctcaaaccaattctcagct 22267
>dbj|AB114835.1| Rattus norvegicus Gucy1b2a, Gucy1b2b genes for soluble guanylate cyclase beta 2a, soluble guanylate cyclase beta 2b, complete cds Length = 25861 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gcaagtgttgggctgaaccc 287 |||||||||||||||||||| Sbjct: 729 gcaagtgttgggctgaaccc 710
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgaga 544 ||||||||||||||||||| | |||| |||| | || ||||||| Sbjct: 639 tgctgttggagcagagctggctcacagcttctcgagcaacgaga 682
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 501 tgctgttggagcagagctgtcccacaacttcccaaggaacgaga 544 ||||||||||||||||||| | |||| |||| | || ||||||| Sbjct: 683 tgctgttggagcagagctggctcacagcttctcgagcaacgaga 726
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Plus Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatcttctgacaaca 150 |||||||||||| |||| | ||| | ||||||||||| |||||| || | | || ||| Sbjct: 270 aagaacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacgaca 329 Query: 151 ttcacagttgatgagtttgcaactccagggct 182 | || ||||||||| ||||||| |||||||| Sbjct: 330 attactgttgatgagattgcaacaccagggct 361
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 40.1 bits (20), Expect = 8.1 Identities = 74/92 (80%) Strand = Plus / Plus Query: 91 aagaacaagaacttgacagttgatatcaaagcaaactcagagtcagatcttctgacaaca 150 |||||||||||| |||| | ||| | ||||||||||| |||||| || | | || ||| Sbjct: 381 aagaacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacgaca 440 Query: 151 ttcacagttgatgagtttgcaactccagggct 182 | || ||||||||| ||||||| |||||||| Sbjct: 441 attactgttgatgagattgcaacaccagggct 472
>emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e15, COMPLETE SEQUENCE Length = 117939 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gttgacgtttcatttgacac 362 |||||||||||||||||||| Sbjct: 274 gttgacgtttcatttgacac 293
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acagctgcagggactaggaa 53 |||||||||||||||||||| Sbjct: 714 acagctgcagggactaggaa 733
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 ttcaagcactgctgttggagcaga 515 |||||||||||||| ||||||||| Sbjct: 45244 ttcaagcactgctgctggagcaga 45267
>gb|AC155347.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH093K03, complete sequence Length = 78322 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cagggctcaaatcaattctcagct 199 |||||||| ||||||||||||||| Sbjct: 7369 cagggctcgaatcaattctcagct 7346
>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH077A05, complete sequence Length = 113253 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cagggctcaaatcaattctcagct 199 |||||||| ||||||||||||||| Sbjct: 91969 cagggctcgaatcaattctcagct 91946 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,636,431 Number of Sequences: 3902068 Number of extensions: 4636431 Number of successful extensions: 88048 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 87850 Number of HSP's gapped (non-prelim): 196 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
