>ref|XM_470394.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1472

 Score =  165 bits (83), Expect = 2e-37
 Identities = 215/262 (82%)
 Strand = Plus / Minus

                                                                        
Query: 315  ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
            |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 1141 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 1082

                                                                        
Query: 375  tcgtcgtcaggtacacttcctggacctgtntcccagctcgagcaanaagcttgtactggt 434
            | || ||||  || | ||| |||||||||  |||||||||||||| ||||||| |||| |
Sbjct: 1081 tggttgtcaaatatagttcttggacctgtcgcccagctcgagcaagaagcttgaactgat 1022

                                                                        
Query: 435  tgtccttagctggaacactanaaagccagagctntanatnttgcgaaaccacacgttttt 494
            ||||||||||||| |||||  |||||||||| |  | || ||| ||||| |||||||| |
Sbjct: 1021 tgtccttagctggcacactggaaagccagagttccagatcttgtgaaacaacacgtttct 962

                                                                        
Query: 495  ccaacgcctgccgcccgaaccgcacatntgttataccgtcctcttgtaaaagttcattac 554
            |||| ||  | ||||| ||| | || | ||||||||| |||||||| || ||||||||||
Sbjct: 961  ccaatgctcggcgcccaaactgtacgtctgttataccatcctcttgcaatagttcattac 902

                                  
Query: 555  atatcccgtctagtcctggaag 576
            |||| || || |||||||||||
Sbjct: 901  atataccatcaagtcctggaag 880

>ref|XM_470395.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score =  127 bits (64), Expect = 4e-26
 Identities = 152/184 (82%)
 Strand = Plus / Minus

                                                                        
Query: 315  ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
            |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 1383 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 1324

                                                                        
Query: 375  tcgtcgtcaggtacacttcctggacctgtntcccagctcgagcaanaagcttgtactggt 434
            | || ||||  || | ||| |||||||||  |||||||||||||| ||||||| |||| |
Sbjct: 1323 tggttgtcaaatatagttcttggacctgtcgcccagctcgagcaagaagcttgaactgat 1264

                                                                        
Query: 435  tgtccttagctggaacactanaaagccagagctntanatnttgcgaaaccacacgttttt 494
            ||||||||||||| |||||  |||||||||| |  | || ||| ||||| |||||||| |
Sbjct: 1263 tgtccttagctggcacactggaaagccagagttccagatcttgtgaaacaacacgtttct 1204

                
Query: 495  ccaa 498
            ||||
Sbjct: 1203 ccaa 1200



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 533 tcctcttgtaaaagttcattacatatcccgtctagtcctggaag 576
           |||||||| || |||||||||||||| || || |||||||||||
Sbjct: 984 tcctcttgcaatagttcattacatataccatcaagtcctggaag 941

>dbj|AK100284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075D13, full
            insert sequence
          Length = 1659

 Score =  127 bits (64), Expect = 4e-26
 Identities = 152/184 (82%)
 Strand = Plus / Minus

                                                                        
Query: 315  ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
            |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 1383 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 1324

                                                                        
Query: 375  tcgtcgtcaggtacacttcctggacctgtntcccagctcgagcaanaagcttgtactggt 434
            | || ||||  || | ||| |||||||||  |||||||||||||| ||||||| |||| |
Sbjct: 1323 tggttgtcaaatatagttcttggacctgtcgcccagctcgagcaagaagcttgaactgat 1264

                                                                        
Query: 435  tgtccttagctggaacactanaaagccagagctntanatnttgcgaaaccacacgttttt 494
            ||||||||||||| |||||  |||||||||| |  | || ||| ||||| |||||||| |
Sbjct: 1263 tgtccttagctggcacactggaaagccagagttccagatcttgtgaaacaacacgtttct 1204

                
Query: 495  ccaa 498
            ||||
Sbjct: 1203 ccaa 1200



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 533 tcctcttgtaaaagttcattacatatcccgtctagtcctggaag 576
           |||||||| || |||||||||||||| || || |||||||||||
Sbjct: 984 tcctcttgcaatagttcattacatataccatcaagtcctggaag 941

>gb|AY106668.1| Zea mays PCO087459 mRNA sequence
          Length = 814

 Score =  115 bits (58), Expect = 2e-22
 Identities = 174/215 (80%)
 Strand = Plus / Minus

                                                                       
Query: 359 ccctcctggtctaggctcgtcgtcaggtacacttcctggacctgtntcccagctcgagca 418
           |||||||||||||||   || ||||  |||||||||||||||||  |||||||||| |||
Sbjct: 735 ccctcctggtctagggaagtggtcaaatacacttcctggacctgcctcccagctcgtgca 676

                                                                       
Query: 419 anaagcttgtactggttgtccttagctggaacactanaaagccagagctntanatnttgc 478
           | |||  || ||  ||||||||||||| ||||| |  ||| ||| |||| || || ||| 
Sbjct: 675 agaagtgtgaacctgttgtccttagcttgaacattcgaaatccaaagctctaaatcttgt 616

                                                                       
Query: 479 gaaaccacacgtttttccaacgcctgccgcccgaaccgcacatntgttataccgtcctct 538
           ||||| |||||||| ||||| ||||| ||||| ||| | || | ||||||||| ||||||
Sbjct: 615 gaaacgacacgtttctccaatgcctggcgcccaaactgtacgtctgttataccatcctct 556

                                              
Query: 539 tgtaaaagttcattacatatcccgtctagtcctgg 573
           || || |||||||| ||||| || || ||||||||
Sbjct: 555 tgcaatagttcattgcatataccatcaagtcctgg 521

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 398      acctgtntcccagctcgagcaanaagcttgtactggttgtccttagctgg 447
                ||||||  |||||||||||||| ||||||| |||| ||||||||||||||
Sbjct: 35217412 acctgtcgcccagctcgagcaagaagcttgaactgattgtccttagctgg 35217461



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 315      ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
                |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 35217049 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 35217108

                 
Query: 375      t 375
                |
Sbjct: 35217109 t 35217109



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 533      tcctcttgtaaaagttcattacatatcccgtctagtcctggaag 576
                |||||||| || |||||||||||||| || || |||||||||||
Sbjct: 35217812 tcctcttgcaatagttcattacatataccatcaagtcctggaag 35217855

>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 398   acctgtntcccagctcgagcaanaagcttgtactggttgtccttagctgg 447
             ||||||  |||||||||||||| ||||||| |||| ||||||||||||||
Sbjct: 96173 acctgtcgcccagctcgagcaagaagcttgaactgattgtccttagctgg 96222



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 315   ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
             |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 95810 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 95869

              
Query: 375   t 375
             |
Sbjct: 95870 t 95870



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 533   tcctcttgtaaaagttcattacatatcccgtctagtcctggaag 576
             |||||||| || |||||||||||||| || || |||||||||||
Sbjct: 96573 tcctcttgcaatagttcattacatataccatcaagtcctggaag 96616

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 398      acctgtntcccagctcgagcaanaagcttgtactggttgtccttagctgg 447
                ||||||  |||||||||||||| ||||||| |||| ||||||||||||||
Sbjct: 35307484 acctgtcgcccagctcgagcaagaagcttgaactgattgtccttagctgg 35307533



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 315      ctcagggaacgcgtcctagtactntttgcaccgccttnttcaccccctcctggtctaggc 374
                |||| ||||| |||||||||||| | || |||||||| || |  ||||||||||||||||
Sbjct: 35307121 ctcaaggaacacgtcctagtactctctgtaccgccttctttatgccctcctggtctaggc 35307180

                 
Query: 375      t 375
                |
Sbjct: 35307181 t 35307181



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 533      tcctcttgtaaaagttcattacatatcccgtctagtcctggaag 576
                |||||||| || |||||||||||||| || || |||||||||||
Sbjct: 35307884 tcctcttgcaatagttcattacatataccatcaagtcctggaag 35307927

>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence
          Length = 161430

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   gggcgggctggcaggcgggct 316
             |||||||||||||||||||||
Sbjct: 62015 gggcgggctggcaggcgggct 62035

>emb|CR392001.6| Zebrafish DNA sequence from clone DKEY-70B24 in linkage group 14,
             complete sequence
          Length = 182769

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   gggcgggctggcaggcgggct 316
             |||||||||||||||||||||
Sbjct: 68654 gggcgggctggcaggcgggct 68634

>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the 5'
              end of the CDKN2B gene for cyclin-dependent kinase
              inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52 residue
              ribosomal protein fusion product 1 (UBA52) (RPL40)
              pseudogene, the 3' end of a variant of the MTAP gene for
              methylthioadenosine phosphorylase (MSAP), a novel gene and
              a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ctatatattccagtggtgaa 136
              ||||||||||||||||||||
Sbjct: 120097 ctatatattccagtggtgaa 120116

>dbj|AB006707.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYC6
          Length = 82315

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttagcataagtatttatatt 28
             ||||||||||||||||||||
Sbjct: 68485 ttagcataagtatttatatt 68504


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,818
Number of Sequences: 3902068
Number of extensions: 2877818
Number of successful extensions: 45120
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45084
Number of HSP's gapped (non-prelim): 35
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)