| Clone Name | bags15e13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 Score = 618 bits (312), Expect = e-174 Identities = 319/320 (99%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1883 ctgggccgtgcactccttcagg-atcaccaactgtggtgtccaggacacgacccagatcc 1941 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1942 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 2001 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2002 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 2061 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 2121 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2122 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 2181 Query: 302 acatcctctgggtgaacccc 321 |||||||||||||||||||| Sbjct: 2182 acatcctctgggtgaacccc 2201
>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene) Length = 2642 Score = 603 bits (304), Expect = e-169 Identities = 317/320 (99%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1928 ctgggccgtgcactccttcagg-atcaccaactgtggtgtccaggacacgacccagatcc 1986 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1987 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 2046 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2047 ctgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 2106 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2107 agggtgtggtgtacggtgccggcattggcccgggcgtgtacgacatccactcccccagga 2166 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2167 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 2226 Query: 302 acatcctctgggtgaacccc 321 |||||||||||||||||||| Sbjct: 2227 acatcctctgggtgaacccc 2246
>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full insert sequence Length = 2640 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 1945 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccagatcc 2003 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 2004 acacccacatgtgctactctaacttcaacgacatcatccactccatcatcaacatggacg 2063 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2064 ctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtcttccgcg 2123 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| ||||||||||||||||| || || || |||||||||||||| |||| Sbjct: 2124 agggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactccccaagga 2183 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 2184 tcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctcgacacta 2243 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 2244 acattctctgggtgaaccc 2262
>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full insert sequence Length = 2058 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 1312 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccagatcc 1370 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 1371 acacccacatgtgctactctaacttcaacgacatcatccactccatcatcaacatggacg 1430 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1431 ctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtcttccgcg 1490 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| ||||||||||||||||| || || || |||||||||||||| |||| Sbjct: 1491 agggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactccccaagga 1550 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 1551 tcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctcgacacta 1610 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 1611 acattctctgggtgaaccc 1629
>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full insert sequence Length = 2668 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 1944 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccagatcc 2002 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 2003 acacccacatgtgctactctaacttcaacgacatcatccactccatcatcaacatggacg 2062 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 2063 ctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtcttccgcg 2122 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| ||||||||||||||||| || || || |||||||||||||| |||| Sbjct: 2123 agggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactccccaagga 2182 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 2183 tcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctcgacacta 2242 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 2243 acattctctgggtgaaccc 2261
>dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G02, full insert sequence Length = 1064 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 369 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccagatcc 427 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 428 acacccacatgtgctactctaacttcaacgacatcatccactccatcatcaacatggacg 487 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 488 ctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtcttccgcg 547 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| ||||||||||||||||| || || || |||||||||||||| |||| Sbjct: 548 agggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactccccaagga 607 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 608 tcccgtccatagaggagattgcggaccgcgtcaacaagatgctcgcggtgctcgacacta 667 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 668 acattctctgggtgaaccc 686
>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene) Length = 2675 Score = 402 bits (203), Expect = e-109 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||| ||||| ||||||||||| ||||| || || || || ||||||| Sbjct: 1961 ctgggccgtccactcgttcaga-atcaccaactgcggtgtgcaagataccactcagatcc 2019 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2020 acacccacatgtgctactccaacttcaacgatatcatccactccatcatcaacatggacg 2079 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 |||| || ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2080 ccgacgtcatcaccattgagaactcacggtccgacgagaagctcctctcggtcttccgcg 2139 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||| ||| ||||| || ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 2140 agggcgtgacctacggggccggcattggccccggcgtctacgacatccactcccccagga 2199 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2200 tcccctccacggaggagattgccgaccgcgtcaacaagatgctcgcggtgctcgacacca 2259 Query: 302 acatcctctgggtgaaccc 320 ||||||||||||||||||| Sbjct: 2260 acatcctctgggtgaaccc 2278
>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full insert sequence Length = 2627 Score = 387 bits (195), Expect = e-104 Identities = 289/319 (90%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||| ||||| ||||| |||||||| |||||||| | Sbjct: 1945 ctgggctgttcactccttcaga-atcacaaactgcggtgttcaggacaccacccagattc 2003 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 2004 acacccacatgtgctactctaacttcaacgacatcatccactccatcataaacatggacg 2063 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 |||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2064 ccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtcttccgcg 2123 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| |||||||||||||| || || || |||||||||||||||||||||| Sbjct: 2124 agggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcccccagga 2183 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| |||||||||||| |||||| ||||||||||||| || ||||||||||| | Sbjct: 2184 tcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctcgacacta 2243 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 2244 acattctctgggtgaaccc 2262
>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full insert sequence Length = 2783 Score = 387 bits (195), Expect = e-104 Identities = 289/319 (90%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||||||||| ||||| ||||| ||||| |||||||| |||||||| | Sbjct: 2064 ctgggctgttcactccttcaga-atcacaaactgcggtgttcaggacaccacccagattc 2122 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 2123 acacccacatgtgctactctaacttcaacgacatcatccactccatcataaacatggacg 2182 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 |||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2183 ccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtcttccgcg 2242 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| ||| |||||||||||||| || || || |||||||||||||||||||||| Sbjct: 2243 agggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcccccagga 2302 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 ||||||||| |||||||||||| |||||| ||||||||||||| || ||||||||||| | Sbjct: 2303 tcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctcgacacta 2362 Query: 302 acatcctctgggtgaaccc 320 |||| |||||||||||||| Sbjct: 2363 acattctctgggtgaaccc 2381
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 369 bits (186), Expect = 4e-99 Identities = 246/266 (92%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 26683960 cagatccacacccacatgtgctactctaacttcaacgacatcatccactccatcatcaac 26684019 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 26684020 atggacgctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtc 26684079 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| ||||||||||||||||| || || || |||||||||||| Sbjct: 26684080 ttccgcgagggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactcc 26684139 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 || ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 26684140 ccaaggatcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctc 26684199 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 26684200 gacactaacattctctgggtgaaccc 26684225 Score = 353 bits (178), Expect = 2e-94 Identities = 244/266 (91%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 26695810 cagattcacacccacatgtgctactctaacttcaacgacatcatccactccatcataaac 26695869 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 26695870 atggacgccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtc 26695929 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| |||||||||||||| || || || ||||||||||||||| Sbjct: 26695930 ttccgcgagggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcc 26695989 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 |||||||||||||||| |||||||||||| |||||| ||||||||||||| || |||||| Sbjct: 26695990 cccaggatcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctc 26696049 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 26696050 gacactaacattctctgggtgaaccc 26696075 Score = 48.1 bits (24), Expect = 0.017 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccag 57 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 26683825 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccag 26683879
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 369 bits (186), Expect = 4e-99 Identities = 246/266 (92%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 26612129 cagatccacacccacatgtgctactctaacttcaacgacatcatccactccatcatcaac 26612188 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 26612189 atggacgctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtc 26612248 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| ||||||||||||||||| || || || |||||||||||| Sbjct: 26612249 ttccgcgagggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactcc 26612308 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 || ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 26612309 ccaaggatcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctc 26612368 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 26612369 gacactaacattctctgggtgaaccc 26612394 Score = 353 bits (178), Expect = 2e-94 Identities = 244/266 (91%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 26623979 cagattcacacccacatgtgctactctaacttcaacgacatcatccactccatcataaac 26624038 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 26624039 atggacgccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtc 26624098 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| |||||||||||||| || || || ||||||||||||||| Sbjct: 26624099 ttccgcgagggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcc 26624158 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 |||||||||||||||| |||||||||||| |||||| ||||||||||||| || |||||| Sbjct: 26624159 cccaggatcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctc 26624218 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 26624219 gacactaacattctctgggtgaaccc 26624244 Score = 48.1 bits (24), Expect = 0.017 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccag 57 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 26611994 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccag 26612048
>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 8623 Score = 369 bits (186), Expect = 4e-99 Identities = 246/266 (92%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 2544 cagatccacacccacatgtgctactctaacttcaacgacatcatccactccatcatcaac 2603 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 |||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 2604 atggacgctgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctccgtc 2663 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| ||||||||||||||||| || || || |||||||||||| Sbjct: 2664 ttccgcgagggtgtgaagtatggtgctggcattggccctggtgtctatgacatccactcc 2723 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 || ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 2724 ccaaggatcccgtccacagaggagattgcggaccgcgtcaacaagatgctcgcggtgctc 2783 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 2784 gacactaacattctctgggtgaaccc 2809 Score = 48.1 bits (24), Expect = 0.017 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccag 57 |||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 2409 ctgggctgttcactccttcaga-atcaccaactgcggtgttcaggacaccacccag 2463
>gb|AY104793.1| Zea mays PCO079166 mRNA sequence Length = 2720 Score = 363 bits (183), Expect = 2e-97 Identities = 286/319 (89%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| || ||||| |||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 1987 ctgggctgtccactctttcagg-atcaccaactgcggagtccaggacaccacccagatcc 2045 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | Sbjct: 2046 acacccacatgtgctactccaacttcaacgacatcatccactccatcatcgacatggatg 2105 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 ||||||||||||| || |||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 2106 ccgatgtgatcacgatcgagaactcccggtctgacgagaagctactgtccgtcttccgcg 2165 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||||||| |||||| |||||||||||||| || || |||||||||||||| || |||| Sbjct: 2166 agggtgtgaagtacggagctggcattggccctggtgtctacgacatccactctcctagga 2225 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 | || |||| |||||||| || ||||||||| | ||||||||||| ||||||||||||| Sbjct: 2226 ttccctccacagaggagatcgcagaccgcgtcgagaagatgctcgccgtgctcgacacca 2285 Query: 302 acatcctctgggtgaaccc 320 ||||||||||||||||||| Sbjct: 2286 acatcctctgggtgaaccc 2304
>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence Length = 1759 Score = 357 bits (180), Expect = 1e-95 Identities = 267/296 (90%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 ||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1003 atcaccaactgcggagtccaggacaccacccagatccacacccatatgtgctactccaac 1062 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||| Sbjct: 1063 ttcaacgacatcatccactccatcatcgacatggacgcagatgtgatcaccatcgagaac 1122 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || ||||||||||||||||| || ||||| ||||||||||||||| |||||| ||||| Sbjct: 1123 tcccggtccgacgagaagctactgtccgtgttccgcgagggtgtgaagtacggagctgga 1182 Query: 205 attggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggagattgcc 264 || || || || || |||||||||||||| ||||||||||| |||| |||||||| || Sbjct: 1183 atcggtccaggtgtctacgacatccactcgcccaggatcccctccaccgaggagatcgcg 1242 Query: 265 gaccgcgtcaacaagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1243 gaccgcgtcaacaagatgctcgccgtgctggacaccaacatcctctgggtgaaccc 1298
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 353 bits (178), Expect = 2e-94 Identities = 244/266 (91%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 75317 cagattcacacccacatgtgctactctaacttcaacgacatcatccactccatcataaac 75258 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 75257 atggacgccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtc 75198 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| |||||||||||||| || || || ||||||||||||||| Sbjct: 75197 ttccgcgagggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcc 75138 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 |||||||||||||||| |||||||||||| |||||| ||||||||||||| || |||||| Sbjct: 75137 cccaggatcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctc 75078 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 75077 gacactaacattctctgggtgaaccc 75052
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 353 bits (178), Expect = 2e-94 Identities = 244/266 (91%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 103168 cagattcacacccacatgtgctactctaacttcaacgacatcatccactccatcataaac 103109 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 103108 atggacgccgatgtgatcaccatcgagaactcccggtccgacgagaagctgctctctgtc 103049 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||||||||||||| ||| |||||||||||||| || || || ||||||||||||||| Sbjct: 103048 ttccgcgagggtgtgaagtatggtgctggcattggtcctggtgtctacgacatccactcc 102989 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctc 294 |||||||||||||||| |||||||||||| |||||| ||||||||||||| || |||||| Sbjct: 102988 cccaggatcccgtccacggaggagattgcggaccgcatcaacaagatgcttgcggtgctc 102929 Query: 295 gacaccaacatcctctgggtgaaccc 320 ||||| ||||| |||||||||||||| Sbjct: 102928 gacactaacattctctgggtgaaccc 102903
>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA sequence Length = 2634 Score = 341 bits (172), Expect = 8e-91 Identities = 265/296 (89%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 ||||||||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 1974 atcaccaactgcggtgtgcaagacaccactcagattcacactcacatgtgctactccaac 2033 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 2034 ttcaacgatatcatccactccatcatcaacatggacgccgacgtcatcaccattgagaac 2093 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || |||||||||||||| || || |||||||| ||||| ||| ||||| || ||| Sbjct: 2094 tcccgctccgacgagaagctcctgtcggtcttccgtgagggcgtgacctacggagccggc 2153 Query: 205 attggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggagattgcc 264 |||||||| ||||| || ||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2154 attggcccaggcgtctatgacatccactcccccaggatcccctccacggaggagattgcc 2213 Query: 265 gaccgcgtcaacaagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 2214 gaccgcgtcaacaagatgctcgcggtcctcgacaccaacatcctgtgggtgaaccc 2269
>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds Length = 2300 Score = 335 bits (169), Expect = 5e-89 Identities = 253/281 (90%) Strand = Plus / Plus Query: 41 tccaggacacgacccagatccacacccacatgtgctactccaacttcaacgacatcatcc 100 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1916 tccaggacaccacccagatccacacccacatgtgctactccaacttcaacgacatcatcc 1975 Query: 101 agtccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgacgaga 160 | || |||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 1976 actcgatcatcgacatggacgcggacgtgatcaccattgagaactcgcggtccgacgaga 2035 Query: 161 agcttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgt 220 |||| |||||||| ||||||||||| || |||||| || ||||| ||||| || || | Sbjct: 2036 agctgctctccgtgttccgcgagggcgtcaagtacggcgcgggcatcggccccggtgtct 2095 Query: 221 acgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaacaaga 280 |||||||||||||||||||||||||||| |||||||| ||||||||| || |||||| Sbjct: 2096 acgacatccactcccccaggatcccgtcggctgaggagatcgccgaccgcatcgacaaga 2155 Query: 281 tgctcgctgtgctcgacaccaacatcctctgggtgaacccc 321 |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 2156 tgctggcggtgctggacaccaacatcctctgggtgaacccc 2196
>gb|AY111481.1| Zea mays CL598_4 mRNA sequence Length = 664 Score = 335 bits (169), Expect = 5e-89 Identities = 244/269 (90%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatc 111 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 663 acccagatccacacccatatgtgctactccaacttcaacgacatcatccactccatcatc 604 Query: 112 aacatggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctcc 171 |||||||||| |||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 603 gacatggacgcagatgtgatcaccatcgagaactcccggtccgacgagaagctactgtcc 544 Query: 172 gtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccac 231 || ||||||||||||||| |||||| ||||| || || || || || |||||||||||| Sbjct: 543 gtgttccgcgagggtgtgaagtacggagctggaatcggtccaggtgtctacgacatccac 484 Query: 232 tcccccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtg 291 || ||||||||||| |||| |||||||| || ||||||||||||||||||||||| ||| Sbjct: 483 tcgcccaggatcccctccaccgaggagatcgcggaccgcgtcaacaagatgctcgccgtg 424 Query: 292 ctcgacaccaacatcctctgggtgaaccc 320 ||||||||||||||||||||||||||||| Sbjct: 423 ctcgacaccaacatcctctgggtgaaccc 395
>gb|AY109415.1| Zea mays CL598_2 mRNA sequence Length = 3017 Score = 327 bits (165), Expect = 1e-86 Identities = 252/281 (89%) Strand = Plus / Minus Query: 41 tccaggacacgacccagatccacacccacatgtgctactccaacttcaacgacatcatcc 100 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 tccaggacaccacccagatccacacccacatgtgctactccaacttcaacgacatcatcc 956 Query: 101 agtccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgacgaga 160 | || |||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 955 actcgatcatcgacatggacgcggacgtgatcaccattgagaactcgcggtccgacgaga 896 Query: 161 agcttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgt 220 |||| |||||||| ||||||||||| || |||||| || ||||| ||||| || || | Sbjct: 895 agctgctctccgtgttccgcgagggcgtcaagtacggcgcgggcatcggccccggtgtct 836 Query: 221 acgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaacaaga 280 ||||||||||||| |||||||||||||| |||||||| ||||||||| || |||||| Sbjct: 835 acgacatccactcgcccaggatcccgtcggctgaggagatcgccgaccgcatcgacaaga 776 Query: 281 tgctcgctgtgctcgacaccaacatcctctgggtgaacccc 321 |||| || ||||| ||||||||||||||||||||||||||| Sbjct: 775 tgctggcggtgctggacaccaacatcctctgggtgaacccc 735
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 264 bits (133), Expect = 2e-67 Identities = 232/265 (87%) Strand = Plus / Minus Query: 56 agatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaaca 115 ||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 73045 agatccacacccatatgtgctactccaactttaacgatatcatccactccatcattgaca 72986 Query: 116 tggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtct 175 |||| ||||||||||||||||| |||||||| ||||| || |||||||| || ||||||| Sbjct: 72985 tggatgccgatgtgatcaccatcgagaactcccggtctgatgagaagctactgtccgtct 72926 Query: 176 tccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactccc 235 |||| |||||||| ||| || |||||||||||||| || || || ||||||||||| | Sbjct: 72925 tccgtgagggtgtcaagtatggagctggcattggccctggtgtctatgacatccactctc 72866 Query: 236 ccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcg 295 ||||||| || | | ||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 72865 ccaggattcccactaccgaggagattgcggaccgcgtcaacaagatgcttgctgtgcttg 72806 Query: 296 acaccaacatcctctgggtgaaccc 320 ||||||||||||||||||||||||| Sbjct: 72805 acaccaacatcctctgggtgaaccc 72781 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 25 atcaccaactgtggtgtccaggacacgacccag 57 ||||||||||| || ||||||||||| |||||| Sbjct: 73153 atcaccaactgcggagtccaggacaccacccag 73121
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine synthase Length = 2795 Score = 236 bits (119), Expect = 4e-59 Identities = 270/319 (84%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 |||||| |||||||||||||| ||||||||| || ||||| || || |||||||||| Sbjct: 2053 ctgggctgtgcactccttcaga-atcaccaacgtcggagtccaagatactacccagatcc 2111 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 | || ||||||||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 2112 atacacacatgtgctactccaacttcaacgacatcatccactccatcattaacatggatg 2171 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||||||||| ||||||||||| || || || |||||||| || || || ||||| | Sbjct: 2172 ctgatgtgatcacaattgagaactcacgttctgatgagaagctgctgtcagttttccggg 2231 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||| ||| |||||||||||| || || ||||| ||||||||||||||||||||||| | Sbjct: 2232 agggagtgaagtacggtgctggaatcgggccgggtgtgtacgacatccactcccccagaa 2291 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 |||| || | || |||||||| ||| | ||||||||||||| ||||| || || |||| Sbjct: 2292 tcccatcaacagaagagattgctgacaggatcaacaagatgcttgctgtccttgaaacca 2351 Query: 302 acatcctctgggtgaaccc 320 ||||| | ||||||||||| Sbjct: 2352 acatcttgtgggtgaaccc 2370
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds Length = 2695 Score = 232 bits (117), Expect = 6e-58 Identities = 243/285 (85%) Strand = Plus / Plus Query: 36 tggtgtccaggacacgacccagatccacacccacatgtgctactccaacttcaacgacat 95 |||||||||||| || |||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 1982 tggtgtccaggataccacccagatccacactcacatgtgctactcgaatttcaacgacat 2041 Query: 96 catccagtccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccga 155 |||||| ||||||||| |||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 2042 catccactccatcatcgacatggacgccgatgttatcaccattgagaactctcgctccga 2101 Query: 156 cgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccggg 215 |||||||||||| || ||||||||||| |||||| ||| |||||||| |||||||| || Sbjct: 2102 cgagaagcttctgtcagtcttccgcgaaggtgtgaagtatggtgctggaattggccctgg 2161 Query: 216 cgtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaa 275 || || |||||||||||||| || || || | | || || ||||| ||| | |||| Sbjct: 2162 tgtctatgacatccactccccaagaataccaccaactgaagaaattgctgacagaatcaa 2221 Query: 276 caagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 ||||||||| || |||||||| | |||||| | ||||||||||| Sbjct: 2222 caagatgctggcagtgctcgagaagaacatcttgtgggtgaaccc 2266
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA, complete cds Length = 2734 Score = 212 bits (107), Expect = 5e-52 Identities = 194/223 (86%) Strand = Plus / Plus Query: 23 gtatcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactcca 82 |||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 2015 gtatcaccaatgttggtgttcaagacactacccagatccacacccacatgtgctactcca 2074 Query: 83 acttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgaga 142 ||||||| ||||||||||| ||||||||| ||||||| || ||||| ||||||||||||| Sbjct: 2075 acttcaatgacatcatccactccatcatcgacatggatgctgatgtcatcaccattgaga 2134 Query: 143 actcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctg 202 |||| || || ||||||||||| ||||| || ||||| ||||| || ||||||||||| Sbjct: 2135 actctcgctctgacgagaagctcctctcagttttccgtgagggagtcaagtacggtgctg 2194 Query: 203 gcattggcccgggcgtgtacgacatccactcccccaggatccc 245 | ||||| || || ||||||||||||||||| || |||||||| Sbjct: 2195 gaattggtcccggtgtgtacgacatccactctcctaggatccc 2237
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds Length = 2644 Score = 204 bits (103), Expect = 1e-49 Identities = 266/319 (83%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||| ||||| ||||||||| ||| || ||||||| || ||||||| Sbjct: 1931 ctgggccgttcactctttcaga-atcaccaacgtcggtatcgaggacaccacacagatcc 1989 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| | Sbjct: 1990 acactcacatgtgctactccaacttcaacgacattatccactccatcatcgacatggatg 2049 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||||||||||||||||||||| || || || |||||||||||||| || ||| | | Sbjct: 2050 ctgatgtgatcaccattgagaactcacgttctgatgagaagcttctctcagttttcaggg 2109 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcccccagga 241 |||| ||| ||||| ||||| |||||||| || || |||||||||||||| || || | Sbjct: 2110 agggagtgaaatacggagctggtattggccctggtgtctacgacatccactctccaagaa 2169 Query: 242 tcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgtgctcgacacca 301 | || || | || |||||||| ||| | || ||||||||||| || || || ||||||| Sbjct: 2170 taccatcaaccgaagagattgctgacagagttaacaagatgcttgcagttcttgacacca 2229 Query: 302 acatcctctgggtgaaccc 320 ||||| | ||||||||||| Sbjct: 2230 acatcttatgggtgaaccc 2248
>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds Length = 2682 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1967 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2025 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2026 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2085 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2086 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2145 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2146 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2197
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence Length = 2295 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1872 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 1930 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 1931 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 1990 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 1991 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2050 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2051 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2102
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (At5g17920) mRNA, complete cds Length = 2585 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1960 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2018 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2019 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2078 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2079 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2138 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2139 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2190
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2298 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1875 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 1933 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 1934 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 1993 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 1994 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2053 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2054 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2105
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2648 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2594 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms1 gene) Length = 2326 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1880 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 1938 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 1939 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 1998 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 1999 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2058 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| ||| |||||||| ||||| || || || |||||||||||||| Sbjct: 2059 aaggagtgaagtatggtgctggaattggtccaggagtctacgacatccactc 2110
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2613 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2608 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2460 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, complete cds, clone: RAFL22-94-C14 Length = 1684 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 985 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 1043 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 1044 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 1103 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 1104 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 1163 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 1164 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 1215
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2549 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase (MPI7.9) mRNA, complete cds Length = 2646 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1957 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 2015 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 2016 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2075 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2076 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2135 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2136 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2187
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 505 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 563 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 564 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 623 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 624 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 683 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 684 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 735
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase (ATCIMS) mRNA, complete cds Length = 2595 Score = 190 bits (96), Expect = 2e-45 Identities = 199/232 (85%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggacacgacccagatcc 61 ||||||||| ||||||||||| |||||||||||||| ||||| |||| |||||||||| Sbjct: 1883 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagacagcacccagatcc 1941 Query: 62 acacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaacatggacg 121 |||| ||||||||||||||| ||||||| |||||||| || ||||||||| ||||||| | Sbjct: 1942 acactcacatgtgctactcccacttcaatgacatcatacactccatcatcgacatggatg 2001 Query: 122 ccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcg 181 | ||||| ||||||||||||||||| |||| || ||||||||||| ||||| ||||| | Sbjct: 2002 ctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtgttccgtg 2061 Query: 182 agggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 | || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 2062 aaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 2113
>gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, partial cds Length = 680 Score = 182 bits (92), Expect = 5e-43 Identities = 245/296 (82%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 ||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||||||||| Sbjct: 256 atcactaactgcggtgtccaggacacaactcagattcacactcacatgtgctactccaac 315 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||| || |||||||| ||||||||| ||||||| || ||||||||||||||||||||| Sbjct: 316 ttcaatgatatcatccactccatcatcgacatggatgctgatgtgatcaccattgagaac 375 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || || |||||||| || || || ||||||||||| || |||||||||||| Sbjct: 376 tcccgatctgatgagaagctcctttctgttttccgcgagggagtcaagtacggtgctgga 435 Query: 205 attggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggagattgcc 264 ||||| ||||| || || ||||| ||||| || || || || || | || |||||||| Sbjct: 436 attggtccgggtgtctatgacattcactctccaagaataccatcgacagaagagattgct 495 Query: 265 gaccgcgtcaacaagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 ||| | || ||||||||||| || ||||| || || |||||| | ||||| ||||| Sbjct: 496 gacagagttaacaagatgcttgcagtgctggatacgaacatcttgtgggtcaaccc 551
>gb|AY662341.1| Medicago sativa methionine synthase mRNA, partial cds Length = 552 Score = 178 bits (90), Expect = 7e-42 Identities = 213/254 (83%) Strand = Plus / Plus Query: 37 ggtgtccaggacacgacccagatccacacccacatgtgctactccaacttcaacgacatc 96 ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 238 ggtgttcaggacaccacccagatccacactcacatgtgctactccaacttcaacgacatc 297 Query: 97 atccagtccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgac 156 || || |||||||| | ||||| || ||||| ||||| ||||||||||| || |||||| Sbjct: 298 attcattccatcattgatatggatgctgatgttatcacaattgagaactcccgttccgac 357 Query: 157 gagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggc 216 || |||||||| || |||||||| || || || || |||||||| |||||||| || Sbjct: 358 gaaaagcttctatcagtcttccgtgaaggagttaaatatggtgctggaattggccctggt 417 Query: 217 gtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaac 276 ||||| |||||||||||||| || ||||| | | |||||||| |||||| | ||||| Sbjct: 418 gtgtatgacatccactccccaagaatcccaccaactgaggagatcgccgacaggatcaac 477 Query: 277 aagatgctcgctgt 290 |||||||| ||||| Sbjct: 478 aagatgcttgctgt 491
>gb|BC034830.1| Mus musculus cDNA clone MGC:28753 IMAGE:4483004, complete cds Length = 2755 Score = 174 bits (88), Expect = 1e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 54 ccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaa 113 ||||||||||||||||||||||||||| |||||||| |||||||| || || ||||| | Sbjct: 2064 ccagatccacacccacatgtgctactctaacttcaatgacatcattcactctatcattga 2123 Query: 114 catggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgt 173 |||||| || ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 2124 catggatgctgatgtcatcaccattgagaactctcgttctgacgagaagcttctctcagt 2183 Query: 174 cttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 ||||| ||||| || |||||||||||| |||||||| || || |||||||| ||||| Sbjct: 2184 tttccgtgagggagttaagtacggtgctggtattggccctggtgtctacgacattcactc 2243 Query: 234 ccccaggatccc 245 ||| |||||||| Sbjct: 2244 cccaaggatccc 2255
>gb|BC032196.1| Mus musculus cDNA clone MGC:38244 IMAGE:5324059, complete cds Length = 2766 Score = 174 bits (88), Expect = 1e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 54 ccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaa 113 ||||||||||||||||||||||||||| |||||||| |||||||| || || ||||| | Sbjct: 2075 ccagatccacacccacatgtgctactctaacttcaatgacatcattcactctatcattga 2134 Query: 114 catggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgt 173 |||||| || ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 2135 catggatgctgatgtcatcaccattgagaactctcgttctgacgagaagcttctctcagt 2194 Query: 174 cttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 ||||| ||||| || |||||||||||| |||||||| || || |||||||| ||||| Sbjct: 2195 tttccgtgagggagttaagtacggtgctggtattggccctggtgtctacgacattcactc 2254 Query: 234 ccccaggatccc 245 ||| |||||||| Sbjct: 2255 cccaaggatccc 2266
>gb|AC126009.22| Medicago truncatula clone mth2-15c20, complete sequence Length = 118705 Score = 174 bits (88), Expect = 1e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 70429 cagatccacactcacatgtgctactccaacttcaacgacatcattcattccatcattaat 70370 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||| || ||||| ||||| ||||||||||| || |||||||| |||||||| || ||| Sbjct: 70369 atggatgctgatgttatcacaattgagaactcccgttccgacgaaaagcttctatcagtc 70310 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||| || || || || || |||||||| |||||||| || ||||| |||||||||||| Sbjct: 70309 ttccgtgaaggagttgtttatggtgctggaattggccctggtgtgtatgacatccactcc 70250 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgt 290 || || ||||| | | || ||||| |||||| | ||||||||||||| ||||| Sbjct: 70249 ccaagaatcccaccaaccgacgagatcgccgacaggatcaacaagatgcttgctgt 70194
>gb|AC137822.30| Medicago truncatula clone mth2-31e20, complete sequence Length = 140561 Score = 174 bits (88), Expect = 1e-40 Identities = 199/236 (84%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 54959 cagatccacactcacatgtgctactccaacttcaacgacatcattcattccatcattaat 54900 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||| || ||||| ||||| ||||||||||| || |||||||| |||||||| || ||| Sbjct: 54899 atggatgctgatgttatcacaattgagaactcccgttccgacgaaaagcttctatcagtc 54840 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactcc 234 ||||| || || || || || |||||||| |||||||| || ||||| |||||||||||| Sbjct: 54839 ttccgtgaaggagttgtttatggtgctggaattggccctggtgtgtatgacatccactcc 54780 Query: 235 cccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgctcgctgt 290 || || ||||| | | || ||||| |||||| | ||||||||||||| ||||| Sbjct: 54779 ccaagaatcccaccaaccgacgagatcgccgacaggatcaacaagatgcttgctgt 54724
>dbj|AB221011.1| Beta vulgaris BvMS1 mRNA for methionine synthase, complete cds Length = 2720 Score = 167 bits (84), Expect = 3e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 54 ccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaa 113 ||||||||||||||||||||||||||| |||||||| |||||||| || || ||||| | Sbjct: 2018 ccagatccacacccacatgtgctactctaacttcaatgacatcattcactctatcattga 2077 Query: 114 catggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgt 173 |||||| || ||||| ||||||||||||||||| || || ||||||||||||||||| || Sbjct: 2078 catggatgctgatgtcatcaccattgagaactctcgttctgacgagaagcttctctcagt 2137 Query: 174 cttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 ||||| ||||| || |||||||||||| |||||||| || | |||||||| ||||| Sbjct: 2138 tttccgtgagggagttaagtacggtgctggtattggccctgggttctacgacattcactc 2197 Query: 234 ccccaggatccc 245 ||| |||||||| Sbjct: 2198 cccaaggatccc 2209
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase Length = 2602 Score = 165 bits (83), Expect = 1e-37 Identities = 230/279 (82%) Strand = Plus / Plus Query: 43 caggacacgacccagatccacacccacatgtgctactccaacttcaacgacatcatccag 102 |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1965 caggacactacccagatccacactcacatgtgctactccaacttcaacgatatcattcac 2024 Query: 103 tccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgacgagaag 162 || |||||| ||||||| || |||||||| |||||||||||||| | || |||||| Sbjct: 2025 tctatcatcgacatggatgctgatgtgatgaccattgagaactccagatctagtgagaag 2084 Query: 163 cttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtac 222 || || || || ||||| ||||| ||| |||||| ||||| |||||||| || || ||| Sbjct: 2085 ctcctttctgtgttccgtgagggagtgaagtacggagctggaattggccctggtgtctac 2144 Query: 223 gacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatg 282 || ||||| ||||| || || || || | ||||||||||||||| | ||||||||||| Sbjct: 2145 gatatccattccccaagaataccatcaacagaggagattgccgacagaatcaacaagatg 2204 Query: 283 ctcgctgtgctcgacaccaacatcctctgggtgaacccc 321 || || ||| | |||||||||||| | ||||| |||||| Sbjct: 2205 cttgcagtgttggacaccaacatcttgtgggttaacccc 2243
>ref|NM_111249.3| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT3G03780 transcript variant AT3G03780.1 mRNA, complete cds Length = 2615 Score = 153 bits (77), Expect = 4e-34 Identities = 176/209 (84%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1976 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 2035 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 2036 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2095 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2096 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2155 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2156 atcggtcctggtgtttacgacattcactc 2184
>ref|NM_180176.1| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT3G03780 transcript variant AT3G03780.2 mRNA, complete cds Length = 2608 Score = 153 bits (77), Expect = 4e-34 Identities = 176/209 (84%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1969 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 2028 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 2029 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2088 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2089 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2148 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2149 atcggtcctggtgtttacgacattcactc 2177
>gb|BT012107.1| Arabidopsis thaliana At3g03780 mRNA sequence Length = 1519 Score = 153 bits (77), Expect = 4e-34 Identities = 176/209 (84%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1118 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 1177 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 1178 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 1237 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 1238 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 1297 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 1298 atcggtcctggtgtttacgacattcactc 1326
>gb|AY150385.1| Arabidopsis thaliana putative methionine synthase (At3g03780) mRNA, complete cds Length = 2329 Score = 153 bits (77), Expect = 4e-34 Identities = 176/209 (84%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1897 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 1956 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 1957 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2016 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2017 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2076 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2077 atcggtcctggtgtttacgacattcactc 2105
>gb|AY040010.1| Arabidopsis thaliana putative methionine synthase (At3g03780) mRNA, complete cds Length = 2599 Score = 153 bits (77), Expect = 4e-34 Identities = 176/209 (84%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1969 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 2028 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 2029 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2088 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2089 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2148 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2149 atcggtcctggtgtttacgacattcactc 2177
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 149 bits (75), Expect = 6e-33 Identities = 153/179 (85%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 ||||||||||| ||||||||||||||| ||||||| |||||||| || ||||||||| || Sbjct: 39373 cagatccacactcacatgtgctactcccacttcaatgacatcatacactccatcatcgac 39432 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtc 174 ||||| || ||||| ||||||||||||||||| |||| || ||||||||||| ||||| Sbjct: 39433 atggatgctgatgtcatcaccattgagaactccaggtctgatgagaagcttctttccgtg 39492 Query: 175 ttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 ||||| || || ||| |||||||||||| || || || || || |||||||||||||| Sbjct: 39493 ttccgtgaaggagtgaagtacggtgctggaatcggtccaggagtctacgacatccactc 39551 Score = 48.1 bits (24), Expect = 0.017 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 2 ctgggccgtgcactccttcaggtatcaccaactgtggtgtccaggaca 49 ||||||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct: 39223 ctgggccgtccactccttcaga-atcaccaactgtggagtccaagaca 39269
>emb|AJ608674.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms2 gene) Length = 2328 Score = 145 bits (73), Expect = 1e-31 Identities = 175/209 (83%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1902 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 1961 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 |||||||| |||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 1962 ttcaacgatatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2021 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2022 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2081 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2082 atcggtcctggtgtttacgacattcactc 2110
>gb|AY084559.1| Arabidopsis thaliana clone 111720 mRNA, complete sequence Length = 2611 Score = 145 bits (73), Expect = 1e-31 Identities = 175/209 (83%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| ||| Sbjct: 1976 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcaaac 2035 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccattgagaac 144 |||||||| |||||||| || ||||| |||||||||| ||||| ||||||||||||||| Sbjct: 2036 ttcaacgatatcatccactcaatcattgacatggacgctgatgtcatcaccattgagaac 2095 Query: 145 tcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtggtgtacggtgctggc 204 || || || ||||||||||||||||| || ||||| || || ||| ||||||||| || Sbjct: 2096 tctcgttcagacgagaagcttctctcagtgttccgtgaaggagtgaagtacggtgcagga 2155 Query: 205 attggcccgggcgtgtacgacatccactc 233 || || || || || |||||||| ||||| Sbjct: 2156 atcggtcctggtgtttacgacattcactc 2184
>emb|AM158915.1| Plantago major partial mRNA for methionine synthase (met1 gene) Length = 772 Score = 137 bits (69), Expect = 2e-29 Identities = 225/277 (81%) Strand = Plus / Plus Query: 44 aggacacgacccagatccacacccacatgtgctactccaacttcaacgacatcatccagt 103 ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 105 aggacaccacccagatccacacccacatgtgctactccaactttaatgacatcatccact 164 Query: 104 ccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagc 163 |||| || ||||||||||| ||||| || |||||||| ||||| || || || ||||| | Sbjct: 165 ccattattaacatggacgctgatgttattaccattgaaaactcccgctctgatgagaaac 224 Query: 164 ttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacg 223 | || || |||||||| || || || || ||||| || ||||| || || || || | Sbjct: 225 tcctgtcagtcttccgtgaaggagtcaaatatggtgccggaattgggccaggggtttatg 284 Query: 224 acatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaacaagatgc 283 | ||||||||||| || ||||| |||| || ||||| || ||| | | |||||||||| Sbjct: 285 atatccactcccctagaatcccatccacagaagagatcgcagacagaattaacaagatgc 344 Query: 284 tcgctgtgctcgacaccaacatcctctgggtgaaccc 320 | || |||||||| |||||||| || ||||| ||||| Sbjct: 345 ttgccgtgctcgagaccaacattctatgggtcaaccc 381
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 131 bits (66), Expect = 2e-27 Identities = 150/178 (84%) Strand = Plus / Minus Query: 56 agatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaaca 115 |||| ||||| |||||||| ||||| |||||||||||||||||||| || ||||| ||| Sbjct: 56661 agattcacactcacatgtgttactcaaacttcaacgacatcatccactcaatcattgaca 56602 Query: 116 tggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccgtct 175 ||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| || | Sbjct: 56601 tggacgctgatgtcatcaccattgagaactctcgttcagacgagaagcttctctcagtgt 56542 Query: 176 tccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccactc 233 |||| || || ||| ||||||||| || || || || || || |||||||| ||||| Sbjct: 56541 tccgtgaaggagtgaagtacggtgcaggaatcggtcctggtgtttacgacattcactc 56484
>ref|XM_469072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 217 gtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaac 276 ||||| ||||||||||||||||||||||| |||| |||||||| || |||||| ||||| Sbjct: 1083 gtgtatgacatccactcccccaggatcccctccaccgaggagatcgcggaccgcatcaac 1024 Query: 277 aagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 |||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 1023 aagatgcttgccgtgcttgacaccaacatcctctaggtgaaccc 980 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 134 ccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtg 189 |||| |||||||| || |||| |||||||| || ||||||||||||||||||||| Sbjct: 1136 ccatcgagaactcccgaaccgatgagaagctcctgtccgtcttccgcgagggtgtg 1081
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 217 gtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaac 276 ||||| ||||||||||||||||||||||| |||| |||||||| || |||||| ||||| Sbjct: 25306239 gtgtatgacatccactcccccaggatcccctccaccgaggagatcgcggaccgcatcaac 25306298 Query: 277 aagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 |||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 25306299 aagatgcttgccgtgcttgacaccaacatcctctaggtgaaccc 25306342 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 134 ccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtg 189 |||| |||||||| || |||| |||||||| || ||||||||||||||||||||| Sbjct: 25306186 ccatcgagaactcccgaaccgatgagaagctcctgtccgtcttccgcgagggtgtg 25306241
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Minus Query: 217 gtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaac 276 ||||| ||||||||||||||||||||||| |||| |||||||| || |||||| ||||| Sbjct: 137121 gtgtatgacatccactcccccaggatcccctccaccgaggagatcgcggaccgcatcaac 137062 Query: 277 aagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 |||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 137061 aagatgcttgccgtgcttgacaccaacatcctctaggtgaaccc 137018 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 134 ccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtg 189 |||| |||||||| || |||| |||||||| || ||||||||||||||||||||| Sbjct: 137174 ccatcgagaactcccgaaccgatgagaagctcctgtccgtcttccgcgagggtgtg 137119
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 6e-24 Identities = 93/104 (89%) Strand = Plus / Plus Query: 217 gtgtacgacatccactcccccaggatcccgtccaaggaggagattgccgaccgcgtcaac 276 ||||| ||||||||||||||||||||||| |||| |||||||| || |||||| ||||| Sbjct: 25397548 gtgtatgacatccactcccccaggatcccctccaccgaggagatcgcggaccgcatcaac 25397607 Query: 277 aagatgctcgctgtgctcgacaccaacatcctctgggtgaaccc 320 |||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 25397608 aagatgcttgccgtgcttgacaccaacatcctctaggtgaaccc 25397651 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 134 ccattgagaactcgcggtccgacgagaagcttctctccgtcttccgcgagggtgtg 189 |||| |||||||| || |||| |||||||| || ||||||||||||||||||||| Sbjct: 25397495 ccatcgagaactcccgaaccgatgagaagctcctgtccgtcttccgcgagggtgtg 25397550
>ref|NM_122107.2| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G20980 mRNA, complete cds Length = 2728 Score = 107 bits (54), Expect = 2e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| || ||||||||||||||||| || || || | Sbjct: 2077 cagatccacacccacatgtgctactcaaatttcaacgacatcatccactcaattattgat 2136 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagct 164 ||||| || ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 2137 atggatgctgatgtgatcactattgagaactcacggtcagatgagaagct 2186
>emb|AJ608675.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms3 gene) Length = 2464 Score = 107 bits (54), Expect = 2e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| || ||||||||||||||||| || || || | Sbjct: 2072 cagatccacacccacatgtgctactcaaatttcaacgacatcatccactcaattattgat 2131 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagct 164 ||||| || ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 2132 atggatgctgatgtgatcactattgagaactcacggtcagatgagaagct 2181
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 107 bits (54), Expect = 2e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| || ||||||||||||||||| || || || | Sbjct: 68457 cagatccacacccacatgtgctactcaaatttcaacgacatcatccactcaattattgat 68398 Query: 115 atggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagct 164 ||||| || ||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 68397 atggatgctgatgtgatcactattgagaactcacggtcagatgagaagct 68348
>emb|BX825589.1|CNS0A4R8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2560 Score = 99.6 bits (50), Expect = 5e-18 Identities = 98/114 (85%) Strand = Plus / Plus Query: 25 atcaccaactgtggtgtccaggacacgacccagatccacacccacatgtgctactccaac 84 |||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||| || Sbjct: 1964 atcaccaactgtggcgtccaagacagcactcagattcacactcacatgtgttactcacac 2023 Query: 85 ttcaacgacatcatccagtccatcatcaacatggacgccgatgtgatcaccatt 138 ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||| Sbjct: 2024 ttcaacgacatcatccactcaatcattgacatggacgctgatgtcatcaccatt 2077
>emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 93.7 bits (47), Expect = 3e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 103 tccatcatcaacatggacgccgatgtgatcaccattgagaactcgcggtccgacgagaag 162 ||||||||| ||||||| || ||||| ||||||||||||||||| |||| || |||||| Sbjct: 7 tccatcatcgacatggatgctgatgtcatcaccattgagaactccaggtctgatgagaag 66 Query: 163 cttctctccgtcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtac 222 ||||| ||||| ||||| || || ||| |||||||||||| || || || || || ||| Sbjct: 67 cttctttccgtgttccgtgaaggagtgaagtacggtgctggaatcggtccaggagtctac 126 Query: 223 gacatccactc 233 ||||||||||| Sbjct: 127 gacatccactc 137
>emb|BX825347.1|CNS0A52F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 566 Score = 81.8 bits (41), Expect = 1e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 113 acatggacgccgatgtgatcaccattgagaactcgcggtccgacgagaagcttctctccg 172 |||||||||| ||||| ||||||||||||||||| || || ||||||||||||||||| | Sbjct: 16 acatggacgctgatgtcatcaccattgagaactctcgttcagacgagaagcttctctcag 75 Query: 173 tcttccgcgagggtgtggtgtacggtgctggcattggcccgggcgtgtacgacatccact 232 | ||||| || || ||| ||||||||| || || || || || || |||||||| |||| Sbjct: 76 tgttccgtgaaggagtgaagtacggtgcaggaatcggtcctggtgtttacgacattcact 135 Query: 233 c 233 | Sbjct: 136 c 136
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 81.8 bits (41), Expect = 1e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatcc 100 |||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 580094 acccagatccacacccacatgtgctactccgagttcaacgacatcatcc 580046 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 208 ggcccgggcgtgtacgacatccactcccc 236 ||||||||||| |||||||| |||||||| Sbjct: 579941 ggcccgggcgtctacgacattcactcccc 579913
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 75.8 bits (38), Expect = 8e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatcaac 114 |||||||||||||||||||||||||| | ||||||||||||||| || | ||| | || Sbjct: 1601247 cagatccacacccacatgtgctactcggagttcaacgacatcatcgaggcgatcgccgac 1601306 Query: 115 atggacgccgatgtgatc 132 ||||||||||| |||||| Sbjct: 1601307 atggacgccgacgtgatc 1601324 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 205 attggcccgggcgtgtacgacatccactccccc 237 |||||||||||||| |||||||||||||||||| Sbjct: 1601394 attggcccgggcgtctacgacatccactccccc 1601426
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 73.8 bits (37), Expect = 3e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatca 109 |||| |||||||| ||||| |||||||||||| | ||||||||||||||| |||| ||| Sbjct: 52689 cgacgcagatccatacccatatgtgctactccgagttcaacgacatcatcgagtcgatcg 52748 Query: 110 tcaacatggacgccgatgtgatcac 134 ||||||||||||||||||||| Sbjct: 52749 cggccatggacgccgatgtgatcac 52773
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 73.8 bits (37), Expect = 3e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 50 cgacccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatca 109 |||| |||||||| ||||| |||||||||||| | ||||||||||||||| |||| ||| Sbjct: 262723 cgacgcagatccatacccatatgtgctactccgagttcaacgacatcatcgagtcgatcg 262664 Query: 110 tcaacatggacgccgatgtgatcac 134 ||||||||||||||||||||| Sbjct: 262663 cggccatggacgccgatgtgatcac 262639
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 73.8 bits (37), Expect = 3e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatc 111 ||||||||||||||||||||||||||||| | ||||||||||||||| | | ||| | Sbjct: 2361617 acccagatccacacccacatgtgctactcggaattcaacgacatcatcgaagcgatcgcc 2361676 Query: 112 aacatggacgccgatgtgatcaccattgagaactcgcggtccgac 156 ||||||||||| || |||||||| |||| |||||| |||||| Sbjct: 2361677 gcgatggacgccgacgtcatcaccatcgagacctcgcgctccgac 2361721
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactccaacttcaacgacatcatc 99 |||||||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 4222 cgacccagatccacacccacatgtgctattcggagttcaacgacatcatc 4271
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 65.9 bits (33), Expect = 7e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatca 109 |||| |||||||| ||||| |||||||||||| | ||||||||||||||| |||| ||| Sbjct: 136937 cgacgcagatccatacccatatgtgctactccgagttcaacgacatcatcgagtcgatcg 136996 Query: 110 tcaacatggacgccgatgtgatcac 134 |||||||||||||||||||| Sbjct: 136997 cggcgatggacgccgatgtgatcac 137021
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 51 gacccagatccacacccacatgtgctactccaacttcaacgacatcatc 99 |||||||||||||||||| |||||||| ||| | ||||||||||||||| Sbjct: 2011416 gacccagatccacacccatatgtgctattccgaattcaacgacatcatc 2011464
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatc 99 |||||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 4030670 acccagatccacacccacatgtgctattcggagttcaacgacatcatc 4030623
>gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsive methionine synthase (ER69) mRNA, partial cds Length = 206 Score = 61.9 bits (31), Expect = 1e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 199 gctggcattggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggag 258 ||||| || ||||| || ||||||||||||||||| || || || || || | || ||| Sbjct: 2 gctggtatcggccctggtgtgtacgacatccactctccaagaataccatcaaccgaagag 61 Query: 259 attgccgaccgcgtcaacaagatgctcgctgtgctcgacaccaacatcctctgggtgaac 318 ||||||| | | || ||||||||||| || || || |||||||||||| | ||||||||| Sbjct: 62 attgccgtcagagttaacaagatgcttgcagtccttgacaccaacatcttgtgggtgaac 121 Query: 319 ccc 321 ||| Sbjct: 122 ccc 124
>gb|AE004619.1| Pseudomonas aeruginosa PAO1, section 180 of 529 of the complete genome Length = 11351 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatc 111 ||||||||||| || |||||||||||| | | |||||||| | ||| |||||||| | Sbjct: 4196 acccagatccatacgcacatgtgctacagcgagttcaacgatgtgatcgagtccatcgcc 4255 Query: 112 aacatggacgccgatgtgatcaccattgagaactcgcg 149 |||||||||||| ||||||||||| |||| |||||| Sbjct: 4256 gccatggacgccgacgtgatcaccatcgagacctcgcg 4293
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatc 111 ||||||||||||||||||||||||||| | | ||||||||| | ||| |||| ||| | Sbjct: 4948533 acccagatccacacccacatgtgctacagcgagttcaacgacgtgatcgagtcgatcgcc 4948474 Query: 112 aacatggacgccgatgtgatcaccattgagaactcgcg 149 ||||| |||||||| |||||||| |||| |||||| Sbjct: 4948473 gcgatggatgccgatgtcatcaccatcgagacctcgcg 4948436 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 205 attggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggagat 260 |||||||| |||||||||||||||||||| || || | ||| ||||||||||||| Sbjct: 4948383 attggccctggcgtgtacgacatccactcgccacgggtgccgaccaaggaggagat 4948328
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatc 99 ||||||||||| |||||||||||||| | ||||||||||||||| Sbjct: 755922 cagatccacacgcacatgtgctactcggaattcaacgacatcatc 755966
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatc 99 ||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 3125886 cagatccacacccacatgtgctattcggagttcaacgacatcatc 3125930
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatc 108 ||||||||||||||||||||||||||| || | ||| ||||||| ||||| ||||| Sbjct: 136193 acccagatccacacccacatgtgctacgccgagttcggcgacatcgtccaggccatc 136249 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Plus Query: 214 ggcgtgtacgacatccactcccc 236 ||||||||||||||||||||||| Sbjct: 136352 ggcgtgtacgacatccactcccc 136374
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactc 80 ||||||||||||||||||||||||||||| Sbjct: 164508 acccagatccacacccacatgtgctactc 164480 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactc 80 |||||||| |||||||||||||||||||| Sbjct: 142981 acccagattcacacccacatgtgctactc 142953
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactc 80 ||||||||||||||||||||||||||||| Sbjct: 2452940 acccagatccacacccacatgtgctactc 2452912
>gb|AE008885.1| Salmonella typhimurium LT2, section 189 of 220 of the complete genome Length = 20366 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacat 95 ||||||||||||||||||||||| |||| | | ||||||||||| Sbjct: 3965 acccagatccacacccacatgtgttactgcgagttcaacgacat 4008
>emb|AL672113.1|MLO672113 Mesorhizobium loti R7A symbiosis island; segment 2/4 Length = 152050 Score = 56.0 bits (28), Expect = 7e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactcc 81 ||||||||||||||||||| |||||||||||| Sbjct: 45417 cgacccagatccacacccatatgtgctactcc 45448
>emb|AL627278.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 14/20 Length = 258050 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacat 95 ||||||||||||||||||||||| |||| | | ||||||||||| Sbjct: 241826 acccagatccacacccacatgtgttactgcgagttcaacgacat 241783
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacat 95 ||||||||||||||||||||||| |||| | | ||||||||||| Sbjct: 3949886 acccagatccacacccacatgtgttactgcgagttcaacgacat 3949929
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 54 ccagatccacacccacatgtgctactcc 81 |||||||||||||||||||||||||||| Sbjct: 1265328 ccagatccacacccacatgtgctactcc 1265301
>gb|AF233324.1|STYSTMD1 Salmonella typhimurium fragment STMD1 Length = 96086 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacat 95 ||||||||||||||||||||||| |||| | | ||||||||||| Sbjct: 67626 acccagatccacacccacatgtgttactgcgagttcaacgacat 67669
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacat 95 ||||||||||||||||||||||| |||| | | ||||||||||| Sbjct: 3433484 acccagatccacacccacatgtgttactgcgagttcaacgacat 3433441
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcat 98 ||||||||||| ||||| |||||||| ||| | |||||||||||||| Sbjct: 2772774 acccagatccatacccatatgtgctattccgagttcaacgacatcat 2772820
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 58 atccacacccacatgtgctactccaacttcaacga 92 |||||||||||||||||||||||| | |||||||| Sbjct: 143935 atccacacccacatgtgctactccgagttcaacga 143901
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 58 atccacacccacatgtgctactccaacttcaacga 92 |||||||||||||||||||||||| | |||||||| Sbjct: 1188750 atccacacccacatgtgctactccgagttcaacga 1188716
>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene cluster, downstream region Length = 10029 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 52 acccagatccacacccacatgtgctac 78 ||||||||||||||||||||||||||| Sbjct: 6900 acccagatccacacccacatgtgctac 6874 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 211 ccgggcgtgtacgacatccactcccc 236 |||||||| ||||||||||||||||| Sbjct: 6744 ccgggcgtctacgacatccactcccc 6719
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 40 gtccaggacacgacccagatccacacccacatgtgctactccaacttcaacgacatcat 98 ||||| ||||| || ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 1536584 gtccatgacactacacagattcatacccacatgtgctactcggaattcaacgacatcat 1536642
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 51 gacccagatccacacccacatgtgctactccaacttcaacgacatc 96 |||||||||||||||||| ||||||||| | | |||||||||||| Sbjct: 1027640 gacccagatccacacccatatgtgctacgcggagttcaacgacatc 1027685
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacga 92 ||||||||||| ||||||||||||||| | |||||||| Sbjct: 290014 cagatccacacgcacatgtgctactccgagttcaacga 289977
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactccaacttcaacgacatcatccagtccatcatc 111 ||||||||||||||||| ||||||||| | | |||||||| | ||| |||||||| | Sbjct: 2669706 acccagatccacacccatatgtgctacagcgaattcaacgatgtgatcgagtccatcgcc 2669765 Query: 112 aacatggacgccgatgtgatcaccattgagaactcgcg 149 |||||| || ||||| |||||||| |||| |||||| Sbjct: 2669766 gccatggatgcggatgtcatcaccatcgagacctcgcg 2669803
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 51 gacccagatccacacccacatgtgctactc 80 ||||||||| |||||||||||||||||||| Sbjct: 1201797 gacccagatacacacccacatgtgctactc 1201768
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatcatc 99 ||||||||||| ||||||||||| || | ||||||||||||||| Sbjct: 395602 cagatccacacgcacatgtgctattcggagttcaacgacatcatc 395646
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 50.1 bits (25), Expect = 0.004 Identities = 28/29 (96%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctactc 80 |||||||| |||||||||||||||||||| Sbjct: 1973687 acccagattcacacccacatgtgctactc 1973715
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 46 gacacgacccagatccacacccacatgtgctactccaacttcaacgacatcat 98 ||||| || ||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 2164713 gacactacacagattcatacccacatgtgctactcggaattcaacgacatcat 2164765
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacat 95 |||||||||||||||||||| |||| | | ||||||||||| Sbjct: 4105912 cagatccacacccacatgtgttactgcgagttcaacgacat 4105952
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Plus Query: 115 atggacgccgatgtgatcaccattgaga 142 |||||||| ||||||||||||||||||| Sbjct: 269301 atggacgctgatgtgatcaccattgaga 269328
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 50 cgacccagatccacacccacatgtgctactcc 81 |||||||||| |||||||| |||||||||||| Sbjct: 4955067 cgacccagattcacacccatatgtgctactcc 4955036
>emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 4/7 Length = 331801 Score = 46.1 bits (23), Expect = 0.069 Identities = 35/39 (89%) Strand = Plus / Plus Query: 58 atccacacccacatgtgctactccaacttcaacgacatc 96 ||||||||||| ||||||||||| | |||||||||||| Sbjct: 88153 atccacacccatatgtgctactctgagttcaacgacatc 88191
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 46.1 bits (23), Expect = 0.069 Identities = 35/39 (89%) Strand = Plus / Minus Query: 61 cacacccacatgtgctactccaacttcaacgacatcatc 99 ||||||||||||||||||| | ||||| | ||||||||| Sbjct: 3542453 cacacccacatgtgctactgcgacttccatgacatcatc 3542415
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.069 Identities = 26/27 (96%) Strand = Plus / Plus Query: 52 acccagatccacacccacatgtgctac 78 |||||||||||||| |||||||||||| Sbjct: 2498339 acccagatccacacgcacatgtgctac 2498365 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggcgtgtacgacatccactc 233 |||||||||||||||||||| Sbjct: 2498498 ggcgtgtacgacatccactc 2498517
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.069 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 gacccagatccacacccacatgtgctactcc 81 |||||| || ||||||||||||||||||||| Sbjct: 1125897 gacccaaattcacacccacatgtgctactcc 1125927
>gb|AY702345.1| Phytophthora infestans 5-methyltetrahydropteroyl-triglutamate-homocystein S-methyltransferase mRNA, partial cds Length = 819 Score = 46.1 bits (23), Expect = 0.069 Identities = 47/55 (85%) Strand = Plus / Plus Query: 208 ggcccgggcgtgtacgacatccactcccccaggatcccgtccaaggaggagattg 262 ||||||||| |||||||||||||||||| | | ||| ||||||||||||||| Sbjct: 733 ggcccgggcacgtacgacatccactcccctgtggtgccgcccaaggaggagattg 787 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 atccacacccacatgtgctact 79 |||||||||||||||||||||| Sbjct: 586 atccacacccacatgtgctact 607
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.069 Identities = 29/31 (93%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactc 80 |||| |||||||| ||||||||||||||||| Sbjct: 3912049 cgacgcagatccatacccacatgtgctactc 3912079
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.069 Identities = 29/31 (93%) Strand = Plus / Plus Query: 50 cgacccagatccacacccacatgtgctactc 80 ||||||||||||||||||| |||||||||| Sbjct: 2998150 cgacccagatccacacccatctgtgctactc 2998180
>gb|U36197.1|CRU36197 Chlamydomonas reinhardtii cobalamin-independent methionine synthase mRNA, complete cds Length = 2927 Score = 46.1 bits (23), Expect = 0.069 Identities = 38/43 (88%) Strand = Plus / Plus Query: 114 catggacgccgatgtgatcaccattgagaactcgcggtccgac 156 ||||||||| || ||| | ||||||||||||||||| |||||| Sbjct: 2122 catggacgcggacgtgctgaccattgagaactcgcgctccgac 2164
>emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 168068 Score = 44.1 bits (22), Expect = 0.27 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 cccagatccacacccacatgtgctactcca 82 |||| ||||||||| ||||||||||||||| Sbjct: 153431 cccatatccacacctacatgtgctactcca 153402
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 0.27 Identities = 40/46 (86%) Strand = Plus / Plus Query: 51 gacccagatccacacccacatgtgctactccaacttcaacgacatc 96 |||||||||||| ||||| |||||||| || | |||||||||||| Sbjct: 900579 gacccagatccatacccatatgtgctatgccgagttcaacgacatc 900624
>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161699 Score = 44.1 bits (22), Expect = 0.27 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 cccagatccacacccacatgtgctactcca 82 |||| ||||||||| ||||||||||||||| Sbjct: 137524 cccatatccacacctacatgtgctactcca 137495
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.27 Identities = 31/34 (91%) Strand = Plus / Minus Query: 44 aggacacgacccagatccacacccacatgtgcta 77 |||||| ||| |||||||||||||| |||||||| Sbjct: 3898007 aggacaggacgcagatccacacccatatgtgcta 3897974
>gb|AF246404.1|AF246404 Acidithiobacillus ferroxidans 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene, partial sequence Length = 1683 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 ccgggcgtgtacgacatccactcccc 236 |||||||| ||||||||||||||||| Sbjct: 1281 ccgggcgtctacgacatccactcccc 1306
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.27 Identities = 37/42 (88%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactccaacttcaacgacatc 96 ||||||||||| ||||||||||| || | |||||||||||| Sbjct: 861282 cagatccacacgcacatgtgctattcggagttcaacgacatc 861241
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtgctactc 80 ||||||||| |||||||||||||||| Sbjct: 1313422 cagatccacgcccacatgtgctactc 1313397
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 58 atccacacccacatgtgctactccaacttcaacgacatcat 98 |||||||| |||||||| |||| | | |||||||||||||| Sbjct: 4519264 atccacactcacatgtgttactgcgagttcaacgacatcat 4519304
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 58 atccacacccacatgtgctactccaacttcaacgacatcat 98 |||||||| |||||||| |||| | | |||||||||||||| Sbjct: 4279839 atccacactcacatgtgttactgcgagttcaacgacatcat 4279879
>ref|XM_795498.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC590212 (LOC590212), mRNA Length = 5685 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 gtggtgtccaggacacgaccc 55 ||||||||||||||||||||| Sbjct: 2363 gtggtgtccaggacacgaccc 2383
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ggtgctggcattggcccgggc 216 ||||||||||||||||||||| Sbjct: 3212834 ggtgctggcattggcccgggc 3212814
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 67 cacatgtgctactccaacttcaacgacatcatc 99 |||||||||||||| | ||||||||||||||| Sbjct: 276253 cacatgtgctactcggagttcaacgacatcatc 276285
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cgtccaaggaggagattgccg 265 ||||||||||||||||||||| Sbjct: 249692 cgtccaaggaggagattgccg 249712
>dbj|AK111164.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B05, full insert sequence Length = 2868 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 208 ggcccgggcgtgtacgacatccactcccc 236 ||||| || |||||||||||||||||||| Sbjct: 2202 ggccccggtgtgtacgacatccactcccc 2230
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gattgccgaccgcgtcaacaagat 281 ||||| |||||||||||||||||| Sbjct: 2475480 gattggcgaccgcgtcaacaagat 2475457
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggcgtgtacgacatccactc 233 |||||||||||||||||||| Sbjct: 1655505 ggcgtgtacgacatccactc 1655486
>gb|AY620994.1| Branchiostoma belcheri tsingtaunese ribosomal protein S4 mRNA, partial sequence Length = 565 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gatgtgatcaccattgagaa 143 |||||||||||||||||||| Sbjct: 157 gatgtgatcaccattgagaa 176
>ref|XM_659310.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6798.2), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 caagatgctcgctgtgctcg 295 |||||||||||||||||||| Sbjct: 792 caagatgctcgctgtgctcg 811
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cagatccacacccacatgtg 74 |||||||||||||||||||| Sbjct: 2147591 cagatccacacccacatgtg 2147572
>gb|AF042280.1|AF042280 Ralstonia eutropha muconolactone isomerase (catC) and 3-oxoadipate enol-lactone hydrolase (catD2) genes, complete cds; and unknown genes Length = 12466 Score = 40.1 bits (20), Expect = 4.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 114 catggacgccgatgtgatcaccattgagaactcgcg 149 ||||||||| || ||||||||||| |||| |||||| Sbjct: 5078 catggacgcggacgtgatcaccatcgagacctcgcg 5043
>gb|AC005155.1|AC005155 Homo sapiens PAC clone RP5-877J2 from 7p14-p15, complete sequence Length = 127282 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cagtccatcatcaacatgga 119 |||||||||||||||||||| Sbjct: 108562 cagtccatcatcaacatgga 108543
>dbj|AK107388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C09, full insert sequence Length = 2566 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 tggtgtccaggacacgacccagatccac 63 ||||||||||||| | |||||||||||| Sbjct: 1983 tggtgtccaggactccacccagatccac 2010
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 ggcccgggcgtgtacgacatccac 231 ||||||||||| |||||||||||| Sbjct: 907305 ggcccgggcgtttacgacatccac 907282 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,001,924 Number of Sequences: 3902068 Number of extensions: 2001924 Number of successful extensions: 38326 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37287 Number of HSP's gapped (non-prelim): 1007 length of query: 321 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 299 effective length of database: 17,147,199,772 effective search space: 5127012731828 effective search space used: 5127012731828 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)