ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9m22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YAE9_YEAST (P39721) Protein YAL049C 40 0.002
2E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC ... 31 1.4
3Y1265_HAEIN (P44144) Hypothetical UPF0142 protein HI1265 29 5.3
4METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31)... 29 5.3
5BPT1_YEAST (P14772) Bile pigment transporter 1 28 9.0
6ZNF8_HUMAN (P17098) Zinc finger protein 8 (Zinc finger protein H... 28 9.0

>YAE9_YEAST (P39721) Protein YAL049C|
          Length = 246

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 25/74 (33%), Positives = 36/74 (48%)
 Frame = -2

Query: 422 KCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVK 243
           K PI +  AE D + P  L    E+ L  N    + + +F GV+HG+  R +    A   
Sbjct: 169 KKPILISAAEEDHIFPANLRHLTEEKLKDNHA-TYQLDLFSGVAHGFAARGDISIPAVKY 227

Query: 242 SAEEALTDMIDWFN 201
           + E+ L D I WFN
Sbjct: 228 AKEKVLLDQIYWFN 241



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>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)|
          Length = 303

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 425 VKCPIAVLGAETDVMSPPELVKEFEQVL 342
           VK PI +LGA+ D  +PP+ V  F  VL
Sbjct: 186 VKWPIEILGAQNDTTTPPKEVYRFVHVL 213



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>Y1265_HAEIN (P44144) Hypothetical UPF0142 protein HI1265|
          Length = 587

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -2

Query: 389 DVMSPPELVKEFE-QVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMI 213
           D  +  EL++E + Q +   + +  F+ I    + GWT    GE  + +  A   L   +
Sbjct: 424 DAETYQELLEELDGQDIDDATRVREFIGIVAPKNSGWTTLRVGELKSMLHLALGELEQAL 483

Query: 212 DWFNKNLK*T*ISGPPFVITNKPVSFF 132
           DW N  L     +    V T +PV+++
Sbjct: 484 DWANWTL-----NMNSSVFTTEPVNYY 505



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>METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 374

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -2

Query: 419 CPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSH 288
           CP   +G  +D + PP  V+E  ++++   G A + +I     H
Sbjct: 304 CPCLGIGISSDFLFPPYQVQEIVRMINDGGGHARYAEIDSPYGH 347



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>BPT1_YEAST (P14772) Bile pigment transporter 1|
          Length = 1559

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +2

Query: 236  RRSLQQPHLRHYISRSIHEKPQG 304
            +R+++Q HL+ ++ + +H KP+G
Sbjct: 1409 KRAVEQAHLKPHLEKMLHSKPRG 1431



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>ZNF8_HUMAN (P17098) Zinc finger protein 8 (Zinc finger protein HF.18)|
          Length = 575

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 245 LQQPHL-RHYISRSIHEKPQGRS*QSEQSLS 334
           +Q  HL RH I+ +  E+P GRS + EQS S
Sbjct: 477 IQSSHLIRHQITHTREEQPHGRSRRREQSSS 507


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,936,256
Number of Sequences: 219361
Number of extensions: 1180067
Number of successful extensions: 3324
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3324
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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