| Clone Name | bags14p06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA, complete cds Length = 2553 Score = 121 bits (61), Expect = 2e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 1 ggtcgactaagcgccaaggctgcgcgtcgtcgtatgtccatgccctgcaccgtctagttg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 ggtcgactaagcgccaaggctgcgcgtcgtcgtatgtccatgccctgcaccgtctagttg 2220 Query: 61 c 61 | Sbjct: 2221 c 2221
>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein Length = 2378 Score = 71.9 bits (36), Expect = 2e-10 Identities = 54/60 (90%) Strand = Plus / Plus Query: 1 ggtcgactaagcgccaaggctgcgcgtcgtcgtatgtccatgccctgcaccgtctagttg 60 |||||||||||||||||| |||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 2173 ggtcgactaagcgccaagtctgcctgtcgtcggatgttcatgccctgcaccgcctagttg 2232
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 gctgcgcgtcgtcgtatg 36 |||||||||||||||||| Sbjct: 339675 gctgcgcgtcgtcgtatg 339692
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 gccaaggctgcgcgtcgt 30 |||||||||||||||||| Sbjct: 2371172 gccaaggctgcgcgtcgt 2371189
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 gccaaggctgcgcgtcgt 30 |||||||||||||||||| Sbjct: 551262 gccaaggctgcgcgtcgt 551279
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 aaggctgcgcgtcgtcgt 33 |||||||||||||||||| Sbjct: 2561178 aaggctgcgcgtcgtcgt 2561195
>gb|AF044271.1|AF044271 Campylobacter jejuni ferredoxin (fdx), alkyl hydroperoxide reductase subunit C (ahpC), and flagellar biosynthetic protein FlhB (flhB) genes, complete cds; and flagellar motor rotation protein MotB (motB) gene, partial cds Length = 2907 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 gctgcgcgtcgtcgtatg 36 |||||||||||||||||| Sbjct: 2132 gctgcgcgtcgtcgtatg 2149
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 36.2 bits (18), Expect = 8.8 Identities = 18/18 (100%) Strand = Plus / Plus Query: 19 gctgcgcgtcgtcgtatg 36 |||||||||||||||||| Sbjct: 303842 gctgcgcgtcgtcgtatg 303859 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 225,145 Number of Sequences: 3902068 Number of extensions: 225145 Number of successful extensions: 12978 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 12887 Number of HSP's gapped (non-prelim): 91 length of query: 61 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 40 effective length of database: 17,151,101,840 effective search space: 686044073600 effective search space used: 686044073600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)