ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NUO6_SOLTU (P80729) NADH-ubiquinone oxidoreductase 11 kDa subuni... 38 0.021
2DRE2B_ARATH (O82133) Dehydration-responsive element-binding prot... 30 5.6

>NUO6_SOLTU (P80729) NADH-ubiquinone oxidoreductase 11 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-11KD) (CI-11KD) (Fragment)
          Length = 19

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 104 GFIMEFAENLILRLMEDPE 160
           GFIMEFAENLILR MEDP+
Sbjct: 1   GFIMEFAENLILRRMEDPK 19



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>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B|
           protein)
          Length = 330

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 110 IMEFAENLILRLMEDPEQRDEAQRAHVYRMKERCERTKAAWALPLRPYGF-WTFDRFNSQ 286
           ++EF +    +++++ E+  + +     + +E+ ++      L +  YG+ W+ D  N Q
Sbjct: 211 LLEFEQQYWGQVLQEKEKPKQEEEEIQQQQQEQQQQQLQPDLLTVADYGWPWSNDIVNDQ 270

Query: 287 LSWDP 301
            SWDP
Sbjct: 271 TSWDP 275


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,051,733
Number of Sequences: 219361
Number of extensions: 573306
Number of successful extensions: 1469
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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