ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_186014.1| Oryza sativa (japonica cultivar-group), mRNA 442 e-121
2dbj|AK119617.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
3gb|AY108434.1| Zea mays PCO081717 mRNA sequence 268 2e-68
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
5dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
6emb|BX822014.1|CNS0A89S Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
7ref|NM_201867.1| Arabidopsis thaliana nucleotide binding AT2G342... 54 6e-04
8ref|NM_128977.2| Arabidopsis thaliana nucleotide binding AT2G342... 54 6e-04
9emb|BX820198.1|CNS0AA29 Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
10gb|BT005438.1| Arabidopsis thaliana clone U50579 putative G-prot... 54 6e-04
11gb|AY087666.1| Arabidopsis thaliana clone 37499 mRNA, complete s... 54 6e-04
12dbj|AK117481.1| Arabidopsis thaliana At2g34260 mRNA for unknown ... 54 6e-04
13gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.57
14emb|AL807757.9| Human DNA sequence from clone RP11-49O14 on chro... 44 0.57
15gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.57
16dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.57
18emb|CR729006.2|CNS0GPG4 Tetraodon nigroviridis full-length cDNA 42 2.3
19emb|AL133460.16| Human DNA sequence from clone RP5-974F1 on chro... 42 2.3
20gb|AF517634.1| Drosophila melanogaster BIR-containing ubiquitin-... 42 2.3
21ref|NM_141738.3| Drosophila melanogaster Bruce CG6303-RA (Bruce)... 42 2.3
22gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86... 42 2.3
23gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24... 42 2.3
24gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, com... 40 8.9
25ref|XM_652873.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.9
26ref|XM_801267.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.9
27gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 8.9
28gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 8.9
29emb|AL356801.5|CNS05TDJ Human chromosome 14 DNA sequence BAC R-4... 40 8.9

>ref|NM_186014.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1062

 Score =  442 bits (223), Expect = e-121
 Identities = 543/647 (83%), Gaps = 2/647 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctccctcatcaccggcgagctccacatgttccgctacgccgacg-gtctgccgctcgaga 60
           |||||||||||||||||||||| || ||||||| |||||||  | ||| || ||  ||||
Sbjct: 69  ctccctcatcaccggcgagctctacctgttccggtacgccgcggagtc-gcagcctgaga 127

                                                                       
Query: 61  ggttgttcgcagaaaaaccccacaaggactcatgcagggctgttcgatttgtggactcgg 120
           ||||||| || | |||| | |||||||| |||||||| ||||| || |||||||| ||||
Sbjct: 128 ggttgtttgcggcaaaatctcacaaggagtcatgcagagctgtccggtttgtggagtcgg 187

                                                                       
Query: 121 gaactgtgattctgacggggtctgctgatatgtcgattgtcgcttctgatgtagaaacag 180
           ||| ||||||| |||| || |||||||||   || ||| | || |||||||| ||||| |
Sbjct: 188 gaaatgtgattttgacaggatctgctgattgctcaattcttgcctctgatgtggaaactg 247

                                                                       
Query: 181 gcaaagtcattgcccgtttggatgatgcacatggtgacgccataaaccgccttgtgtgtc 240
           |||||  |||||| || ||||| ||||||||||   | | |||||| |||||||||||||
Sbjct: 248 gcaaacccattgctcgcttggaggatgcacatgagaatggcataaatcgccttgtgtgtc 307

                                                                       
Query: 241 ttactgaaactacagttgcttcaggcgatgatgcgggttgcattaaggtgtgggatactc 300
           ||||||||||||| ||||||||||| |||||||  |||||||||||||| ||||||||||
Sbjct: 308 ttactgaaactactgttgcttcaggtgatgatgaaggttgcattaaggtatgggatactc 367

                                                                       
Query: 301 gacaacgatcttgctgcaacacttttcaccgccatgaagattatatatcagatatgacct 360
           |  |||| || ||||| ||||| |||||| |||| |||||||| |||||||||||||| |
Sbjct: 368 gggaacgttcctgctgtaacacctttcactgccacgaagattacatatcagatatgacat 427

                                                                       
Query: 361 atgtagctggctcagatcaaatattggccacaagtggtgatggaactttatctgttaaca 420
           ||||| ||| ||||  ||||||| |||| |||||||| || || ||||||||||| | ||
Sbjct: 428 atgtatctgactcaactcaaatactggcaacaagtggcgacgggactttatctgtcagca 487

                                                                       
Query: 421 gtctccggggtaacagagtaaaatcgcaatctgaattttcagaagacgaactcctatctt 480
            ||| ||  | || | ||||||||| |||||||||||||||||||| ||  | |||||| 
Sbjct: 488 atcttcgtaggaataaagtaaaatcacaatctgaattttcagaagatgagttactatctg 547

                                                                       
Query: 481 tggtgataatgaagaatggccaaaaagttgtttgtggaactccaagtggagccctgttgt 540
           ||||| |||||||||| ||  |||||||||| ||||| || ||||||||||| |||||||
Sbjct: 548 tggtggtaatgaagaacggtaaaaaagttgtatgtggcaccccaagtggagctctgttgt 607

                                                                       
Query: 541 tgtattcgtggggacattttaaggactgcagtgaccgttttctggggcacgcacagtctg 600
           | ||||| ||||||  ||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 608 tatattcatggggattttttaaggattgcagtgaccgctttctggggcatgcacagtctg 667

                                                          
Query: 601 ttgataacttgctgaagctggacgaagaaactctgatatctgctgca 647
           ||||||   ||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 668 ttgatacaatgctgaagctggatgaagaaactctaatatctggtgca 714



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>dbj|AK119617.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-G09, full
           insert sequence
          Length = 1455

 Score =  442 bits (223), Expect = e-121
 Identities = 543/647 (83%), Gaps = 2/647 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctccctcatcaccggcgagctccacatgttccgctacgccgacg-gtctgccgctcgaga 60
           |||||||||||||||||||||| || ||||||| |||||||  | ||| || ||  ||||
Sbjct: 166 ctccctcatcaccggcgagctctacctgttccggtacgccgcggagtc-gcagcctgaga 224

                                                                       
Query: 61  ggttgttcgcagaaaaaccccacaaggactcatgcagggctgttcgatttgtggactcgg 120
           ||||||| || | |||| | |||||||| |||||||| ||||| || |||||||| ||||
Sbjct: 225 ggttgtttgcggcaaaatctcacaaggagtcatgcagagctgtccggtttgtggagtcgg 284

                                                                       
Query: 121 gaactgtgattctgacggggtctgctgatatgtcgattgtcgcttctgatgtagaaacag 180
           ||| ||||||| |||| || |||||||||   || ||| | || |||||||| ||||| |
Sbjct: 285 gaaatgtgattttgacaggatctgctgattgctcaattcttgcctctgatgtggaaactg 344

                                                                       
Query: 181 gcaaagtcattgcccgtttggatgatgcacatggtgacgccataaaccgccttgtgtgtc 240
           |||||  |||||| || ||||| ||||||||||   | | |||||| |||||||||||||
Sbjct: 345 gcaaacccattgctcgcttggaggatgcacatgagaatggcataaatcgccttgtgtgtc 404

                                                                       
Query: 241 ttactgaaactacagttgcttcaggcgatgatgcgggttgcattaaggtgtgggatactc 300
           ||||||||||||| ||||||||||| |||||||  |||||||||||||| ||||||||||
Sbjct: 405 ttactgaaactactgttgcttcaggtgatgatgaaggttgcattaaggtatgggatactc 464

                                                                       
Query: 301 gacaacgatcttgctgcaacacttttcaccgccatgaagattatatatcagatatgacct 360
           |  |||| || ||||| ||||| |||||| |||| |||||||| |||||||||||||| |
Sbjct: 465 gggaacgttcctgctgtaacacctttcactgccacgaagattacatatcagatatgacat 524

                                                                       
Query: 361 atgtagctggctcagatcaaatattggccacaagtggtgatggaactttatctgttaaca 420
           ||||| ||| ||||  ||||||| |||| |||||||| || || ||||||||||| | ||
Sbjct: 525 atgtatctgactcaactcaaatactggcaacaagtggcgacgggactttatctgtcagca 584

                                                                       
Query: 421 gtctccggggtaacagagtaaaatcgcaatctgaattttcagaagacgaactcctatctt 480
            ||| ||  | || | ||||||||| |||||||||||||||||||| ||  | |||||| 
Sbjct: 585 atcttcgtaggaataaagtaaaatcacaatctgaattttcagaagatgagttactatctg 644

                                                                       
Query: 481 tggtgataatgaagaatggccaaaaagttgtttgtggaactccaagtggagccctgttgt 540
           ||||| |||||||||| ||  |||||||||| ||||| || ||||||||||| |||||||
Sbjct: 645 tggtggtaatgaagaacggtaaaaaagttgtatgtggcaccccaagtggagctctgttgt 704

                                                                       
Query: 541 tgtattcgtggggacattttaaggactgcagtgaccgttttctggggcacgcacagtctg 600
           | ||||| ||||||  ||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 705 tatattcatggggattttttaaggattgcagtgaccgctttctggggcatgcacagtctg 764

                                                          
Query: 601 ttgataacttgctgaagctggacgaagaaactctgatatctgctgca 647
           ||||||   ||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 765 ttgatacaatgctgaagctggatgaagaaactctaatatctggtgca 811



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>gb|AY108434.1| Zea mays PCO081717 mRNA sequence
          Length = 1064

 Score =  268 bits (135), Expect = 2e-68
 Identities = 450/555 (81%)
 Strand = Plus / Plus

                                                                       
Query: 74  aaaaccccacaaggactcatgcagggctgttcgatttgtggactcgggaactgtgattct 133
           |||| |||||||||| |||||||| |||||||| ||||||||||| ||||  |||||| |
Sbjct: 207 aaaagcccacaaggagtcatgcagagctgttcgttttgtggactcaggaaaagtgatttt 266

                                                                       
Query: 134 gacggggtctgctgatatgtcgattgtcgcttctgatgtagaaacaggcaaagtcattgc 193
           | | ||||| ||||||   ||  || | || || ||||||||| | ||||| | ||||||
Sbjct: 267 gtcagggtcagctgattgctcagttcttgcctcagatgtagaatcgggcaaggccattgc 326

                                                                       
Query: 194 ccgtttggatgatgcacatggtgacgccataaaccgccttgtgtgtcttactgaaactac 253
           ||| ||||| ||||||||||   | ||||||||||||||||| |||||||||||| ||||
Sbjct: 327 ccgcttggaggatgcacatgagaatgccataaaccgccttgtctgtcttactgaatctac 386

                                                                       
Query: 254 agttgcttcaggcgatgatgcgggttgcattaaggtgtgggatactcgacaacgatcttg 313
           | ||||  |||| |||||||  || ||||||||||| |||||||| ||  | ||||||||
Sbjct: 387 aattgccacaggtgatgatgaaggctgcattaaggtatgggatacccgggagcgatcttg 446

                                                                       
Query: 314 ctgcaacacttttcaccgccatgaagattatatatcagatatgacctatgtagctggctc 373
           |||||||| |||| |   ||| || ||||| || ||||||||||||||||| ||||   |
Sbjct: 447 ctgcaacagttttgaagtccacgatgattacatttcagatatgacctatgtggctgagac 506

                                                                       
Query: 374 agatcaaatattggccacaagtggtgatggaactttatctgttaacagtctccggggtaa 433
           | |||| ||| ||||||||||||| ||||||||||| ||||| ||||  || ||| | ||
Sbjct: 507 aaatcagatactggccacaagtggggatggaactttgtctgtgaacaacctgcggaggaa 566

                                                                       
Query: 434 cagagtaaaatcgcaatctgaattttcagaagacgaactcctatctttggtgataatgaa 493
            | |||||  || | |||||||||||||||||| ||  | ||||| |||||| |||||||
Sbjct: 567 taaagtaaggtcacgatctgaattttcagaagatgagttgctatccttggtgttaatgaa 626

                                                                       
Query: 494 gaatggccaaaaagttgtttgtggaactccaagtggagccctgttgttgtattcgtgggg 553
           | ||||  |||| ||||| |||||||||||||||||||| || || || ||||| |||||
Sbjct: 627 gcatggtaaaaaggttgtgtgtggaactccaagtggagcactcttattatattcatgggg 686

                                                                       
Query: 554 acattttaaggactgcagtgaccgttttctggggcacgcacagtctgttgataacttgct 613
           | | ||||| || ||||||||||| ||| | || ||| | |||||||| ||||   ||||
Sbjct: 687 atactttaatgattgcagtgaccgctttatcggacacacgcagtctgtggatacaatgct 746

                          
Query: 614 gaagctggacgaaga 628
           ||||||||| |||||
Sbjct: 747 gaagctggatgaaga 761



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                            
Query: 221      cataaaccgccttgtgtgtcttactgaaactacagttgcttcaggcgatgatgcgggttg 280
                |||||| |||||||||||||||||||||||||| ||||||||||| |||||||  |||||
Sbjct: 27798585 cataaatcgccttgtgtgtcttactgaaactactgttgcttcaggtgatgatgaaggttg 27798644

                         
Query: 281      cattaaggt 289
                |||||||||
Sbjct: 27798645 cattaaggt 27798653



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                            
Query: 286      aggtgtgggatactcgacaacgatcttgctgcaacacttttcaccgccatgaagattata 345
                |||| |||||||||||  |||| || ||||| ||||| |||||| |||| |||||||| |
Sbjct: 27798973 aggtatgggatactcgggaacgttcctgctgtaacacctttcactgccacgaagattaca 27799032

                                                                 
Query: 346      tatcagatatgacctatgtagctggctcagatcaaatattggccacaag 394
                ||||||||||||| |||||| ||| ||||  ||||||| |||| |||||
Sbjct: 27799033 tatcagatatgacatatgtatctgactcaactcaaatactggcaacaag 27799081



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                            
Query: 502      aaaaagttgtttgtggaactccaagtggagccctgttgttgtattcgtggggacatttta 561
                |||||||||| ||||| || ||||||||||| |||||||| ||||| ||||||  |||||
Sbjct: 27799912 aaaaagttgtatgtggcaccccaagtggagctctgttgttatattcatggggatttttta 27799971

                          
Query: 562      aggactgcag 571
                |||| |||||
Sbjct: 27799972 aggattgcag 27799981



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 570      agtgaccgttttctggggcacgcacagtctgttgata 606
                |||||||| ||||||||||| ||||||||||||||||
Sbjct: 27800219 agtgaccgctttctggggcatgcacagtctgttgata 27800255



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                         
Query: 438      gtaaaatcgcaatctgaattttcagaagacgaactcctatctttggtgataatgaag 494
                |||||||| |||||||||||||||||||| ||  | |||||| ||||| ||||||||
Sbjct: 27799760 gtaaaatcacaatctgaattttcagaagatgagttactatctgtggtggtaatgaag 27799816



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 2        ctccctcatcaccggcgagctc 23
                ||||||||||||||||||||||
Sbjct: 27797383 ctccctcatcaccggcgagctc 27797404



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 616      agctggacgaagaaactctgatatctgctgca 647
                ||||||| ||||||||||| ||||||| ||||
Sbjct: 27800362 agctggatgaagaaactctaatatctggtgca 27800393



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>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496C02
          Length = 148419

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                         
Query: 221   cataaaccgccttgtgtgtcttactgaaactacagttgcttcaggcgatgatgcgggttg 280
             |||||| |||||||||||||||||||||||||| ||||||||||| |||||||  |||||
Sbjct: 90964 cataaatcgccttgtgtgtcttactgaaactactgttgcttcaggtgatgatgaaggttg 91023

                      
Query: 281   cattaaggt 289
             |||||||||
Sbjct: 91024 cattaaggt 91032



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                         
Query: 286   aggtgtgggatactcgacaacgatcttgctgcaacacttttcaccgccatgaagattata 345
             |||| |||||||||||  |||| || ||||| ||||| |||||| |||| |||||||| |
Sbjct: 91352 aggtatgggatactcgggaacgttcctgctgtaacacctttcactgccacgaagattaca 91411

                                                              
Query: 346   tatcagatatgacctatgtagctggctcagatcaaatattggccacaag 394
             ||||||||||||| |||||| ||| ||||  ||||||| |||| |||||
Sbjct: 91412 tatcagatatgacatatgtatctgactcaactcaaatactggcaacaag 91460



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 502   aaaaagttgtttgtggaactccaagtggagccctgttgttgtattcgtggggacatttta 561
             |||||||||| ||||| || ||||||||||| |||||||| ||||| ||||||  |||||
Sbjct: 92291 aaaaagttgtatgtggcaccccaagtggagctctgttgttatattcatggggatttttta 92350

                       
Query: 562   aggactgcag 571
             |||| |||||
Sbjct: 92351 aggattgcag 92360



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 570   agtgaccgttttctggggcacgcacagtctgttgata 606
             |||||||| ||||||||||| ||||||||||||||||
Sbjct: 92598 agtgaccgctttctggggcatgcacagtctgttgata 92634



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 438   gtaaaatcgcaatctgaattttcagaagacgaactcctatctttggtgataatgaag 494
             |||||||| |||||||||||||||||||| ||  | |||||| ||||| ||||||||
Sbjct: 92139 gtaaaatcacaatctgaattttcagaagatgagttactatctgtggtggtaatgaag 92195



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2     ctccctcatcaccggcgagctc 23
             ||||||||||||||||||||||
Sbjct: 89762 ctccctcatcaccggcgagctc 89783



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 616   agctggacgaagaaactctgatatctgctgca 647
             ||||||| ||||||||||| ||||||| ||||
Sbjct: 92741 agctggatgaagaaactctaatatctggtgca 92772



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>emb|BX822014.1|CNS0A89S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1223

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 624 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 683

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||| | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 684 tgtggaactcagaatggaactctcttgttgtattcatggggatttttcaaggattgcag 742



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>ref|NM_201867.1| Arabidopsis thaliana nucleotide binding AT2G34260 transcript
           variant AT2G34260.2 mRNA, complete cds
          Length = 1260

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 624 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 683

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 684 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 742



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>ref|NM_128977.2| Arabidopsis thaliana nucleotide binding AT2G34260 transcript
           variant AT2G34260.1 mRNA, complete cds
          Length = 1221

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 570 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 629

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 630 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 688



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>emb|BX820198.1|CNS0AA29 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS91ZE03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1049

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 394 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 453

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 454 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 512



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>gb|BT005438.1| Arabidopsis thaliana clone U50579 putative G-protein beta-subunit
           (transducin) (At2g34260) mRNA, complete cds
          Length = 1093

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 520 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 579

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 580 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 638



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>gb|AY087666.1| Arabidopsis thaliana clone 37499 mRNA, complete sequence
          Length = 1221

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 570 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 629

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 630 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 688



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>dbj|AK117481.1| Arabidopsis thaliana At2g34260 mRNA for unknown protein, complete
           cds, clone: RAFL17-09-G21
          Length = 1206

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 453 gaattttcagaagacgaactcctatctttggtgataatgaagaatggccaaaaagttgtt 512
           |||||||| ||||| ||||| || ||| | || ||||||||||||||||  |||||| | 
Sbjct: 570 gaattttctgaagatgaactactttctgttgttataatgaagaatggccgtaaagttatc 629

                                                                      
Query: 513 tgtggaactccaagtggagccctgttgttgtattcgtggggacattttaaggactgcag 571
           ||||||||||  | |||  | || ||||||||||| ||||||  ||| ||||| |||||
Sbjct: 630 tgtggaactcagaatggtactctcttgttgtattcatggggatttttcaaggattgcag 688



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>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0030L19, complete sequence
          Length = 128848

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 443    atcgcaatctgaattttcagaa 464
              ||||||||||||||||||||||
Sbjct: 117832 atcgcaatctgaattttcagaa 117853



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>emb|AL807757.9| Human DNA sequence from clone RP11-49O14 on chromosome 9 Contains two
             novel genes, complete sequence
          Length = 93279

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 487   taatgaagaatggccaaaaagt 508
             ||||||||||||||||||||||
Sbjct: 89309 taatgaagaatggccaaaaagt 89330



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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24,
              complete sequence
          Length = 142852

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 443    atcgcaatctgaattttcagaa 464
              ||||||||||||||||||||||
Sbjct: 138328 atcgcaatctgaattttcagaa 138307



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 443      atcgcaatctgaattttcagaa 464
                ||||||||||||||||||||||
Sbjct: 23248647 atcgcaatctgaattttcagaa 23248668



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 443      atcgcaatctgaattttcagaa 464
                ||||||||||||||||||||||
Sbjct: 23558557 atcgcaatctgaattttcagaa 23558578



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>emb|CR729006.2|CNS0GPG4 Tetraodon nigroviridis full-length cDNA
          Length = 1042

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 610 tgctgaagctggacgaagaaa 630
           |||||||||||||||||||||
Sbjct: 67  tgctgaagctggacgaagaaa 87



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>emb|AL133460.16| Human DNA sequence from clone RP5-974F1 on chromosome 6, complete
            sequence
          Length = 25660

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 479  tttggtgataatgaagaatgg 499
            |||||||||||||||||||||
Sbjct: 8782 tttggtgataatgaagaatgg 8802



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>gb|AF517634.1| Drosophila melanogaster BIR-containing ubiquitin-conjugating enzyme
            (Bruce) mRNA, complete cds
          Length = 14794

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  gcaaagtcattgcccgtttgg 201
            |||||||||||||||||||||
Sbjct: 7182 gcaaagtcattgcccgtttgg 7202



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>ref|NM_141738.3| Drosophila melanogaster Bruce CG6303-RA (Bruce), mRNA
          Length = 14793

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  gcaaagtcattgcccgtttgg 201
            |||||||||||||||||||||
Sbjct: 7181 gcaaagtcattgcccgtttgg 7201



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>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone
             BACR03L12, complete sequence
          Length = 190672

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   gcaaagtcattgcccgtttgg 201
             |||||||||||||||||||||
Sbjct: 56117 gcaaagtcattgcccgtttgg 56097



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>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete
              sequence
          Length = 223505

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    gcaaagtcattgcccgtttgg 201
              |||||||||||||||||||||
Sbjct: 160453 gcaaagtcattgcccgtttgg 160433



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>gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, complete sequence
          Length = 188055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    atgaagattatatatcagat 353
              ||||||||||||||||||||
Sbjct: 115113 atgaagattatatatcagat 115094



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>ref|XM_652873.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0361.2), mRNA
          Length = 3843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 582  ctggggcacgcacagtctgt 601
            ||||||||||||||||||||
Sbjct: 1339 ctggggcacgcacagtctgt 1320



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>ref|XM_801267.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511297.10) partial mRNA
          Length = 6591

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  ttgcttcaggcgatgatgcgggtt 279
            |||||||||||||| |||||||||
Sbjct: 6004 ttgcttcaggcgattatgcgggtt 6027



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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tgaaactacagttgcttcag 264
             ||||||||||||||||||||
Sbjct: 20789 tgaaactacagttgcttcag 20770



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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 484     tgataatgaagaatggccaaaaag 507
               |||||| |||||||||||||||||
Sbjct: 1746153 tgataaagaagaatggccaaaaag 1746130



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>emb|AL356801.5|CNS05TDJ Human chromosome 14 DNA sequence BAC R-454L9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    atatatcagatatgacctat 362
              ||||||||||||||||||||
Sbjct: 120604 atatatcagatatgacctat 120585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,972,108
Number of Sequences: 3902068
Number of extensions: 4972108
Number of successful extensions: 85591
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85394
Number of HSP's gapped (non-prelim): 186
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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