ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9m13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469999.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
2ref|XM_470000.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
3dbj|AK120592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
4dbj|AK073430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
5gb|AY110603.1| Zea mays CL3344_1 mRNA sequence 54 5e-04
6gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, comple... 44 0.46
7emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 44 0.46
8emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 1.8
9dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
10gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 geno... 40 7.2
11ref|XM_469466.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
12gb|AY172320.1| Xenopus laevis germes mRNA, complete cds 40 7.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
14gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 7.2
15ref|XM_808968.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.2
16gb|AF536961.1| Oryza sativa (japonica cultivar-group) putative p... 40 7.2
17emb|AL356750.16| Human DNA sequence from clone RP11-374F3 on chr... 40 7.2
18emb|AL161654.14| Human DNA sequence from clone RP11-59G22 on chr... 40 7.2
19gb|AY286002.1| Oryza sativa (indica cultivar-group) teosinte-bra... 40 7.2
20gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.2
21gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chrom... 40 7.2
22gb|AY043215.1| Oryza sativa teosinte branched1 protein (tb1) mRN... 40 7.2
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
24gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.2
25gb|AY569607.1| Oryza sativa (japonica cultivar-group) phosphate ... 40 7.2
26dbj|AK107083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
27dbj|AK071903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
28dbj|AK070341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
29dbj|AK065075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
30dbj|AB088343.1| Oryza sativa (japonica cultivar-group) OsTB1 gen... 40 7.2
31gb|AY317101.1| Liao ning virus strain LNSV-NE97-31 segment 3, co... 40 7.2
32gb|AY701341.1| Liao ning virus segment 3, complete sequence 40 7.2
33emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chr... 40 7.2
34gb|AC002402.1|AC002402 Human Chromosome 11 pac pDJ205d23, comple... 40 7.2
35gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosom... 40 7.2
36emb|AL672249.6| Mouse DNA sequence from clone RP23-92P11 on chro... 40 7.2 
>ref|XM_469999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2715

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  gcaacttcgatgaaccagtcgtcgctcggaagcgcgctatcaggatccaatccggtagcg 475
            ||||| ||||||||||| |||||||| |||||  | |||||||| | ||  || ||||| 
Sbjct: 2189 gcaacgtcgatgaaccaatcgtcgcttggaaggacactatcagggttcatccctgtagca 2130

                                   
Query: 476  gagaatgctgccatcgctctatc 498
            || ||||||||||| ||||||||
Sbjct: 2129 gaaaatgctgccattgctctatc 2107
to top
>ref|XM_470000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3763

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  gcaacttcgatgaaccagtcgtcgctcggaagcgcgctatcaggatccaatccggtagcg 475
            ||||| ||||||||||| |||||||| |||||  | |||||||| | ||  || ||||| 
Sbjct: 3276 gcaacgtcgatgaaccaatcgtcgcttggaaggacactatcagggttcatccctgtagca 3217

                                   
Query: 476  gagaatgctgccatcgctctatc 498
            || ||||||||||| ||||||||
Sbjct: 3216 gaaaatgctgccattgctctatc 3194
to top
>dbj|AK120592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146K15, full
            insert sequence
          Length = 3764

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  gcaacttcgatgaaccagtcgtcgctcggaagcgcgctatcaggatccaatccggtagcg 475
            ||||| ||||||||||| |||||||| |||||  | |||||||| | ||  || ||||| 
Sbjct: 3277 gcaacgtcgatgaaccaatcgtcgcttggaaggacactatcagggttcatccctgtagca 3218

                                   
Query: 476  gagaatgctgccatcgctctatc 498
            || ||||||||||| ||||||||
Sbjct: 3217 gaaaatgctgccattgctctatc 3195
to top
>dbj|AK073430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043M17, full
            insert sequence
          Length = 1653

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  gcaacttcgatgaaccagtcgtcgctcggaagcgcgctatcaggatccaatccggtagcg 475
            ||||| ||||||||||| |||||||| |||||  | |||||||| | ||  || ||||| 
Sbjct: 1165 gcaacgtcgatgaaccaatcgtcgcttggaaggacactatcagggttcatccctgtagca 1106

                                   
Query: 476  gagaatgctgccatcgctctatc 498
            || ||||||||||| ||||||||
Sbjct: 1105 gaaaatgctgccattgctctatc 1083
to top
>gb|AY110603.1| Zea mays CL3344_1 mRNA sequence
          Length = 864

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 110/137 (80%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 314 gacgacacggactgcgccgagacggaggccgtcgggctgagcacctccctctccgaggtg 373
           |||||||||||||| || || |||||||| || ||||||  ||||||||| |||    ||
Sbjct: 325 gacgacacggactgtgctgacacggaggctgtggggctgttcacctccctgtccccattg 384

                                                                       
Query: 374 gccggtcgggccctc---ccgctgatcctgctgatgctgtcctgtgcaacttcgatgaac 430
           ||   ||| ||||||   |||| |||||| || || || ||||| ||||| |||||||||
Sbjct: 385 gcgactcgtgccctcccgccgccgatcctactaatactctcctgggcaacgtcgatgaac 444

                            
Query: 431 cagtcgtcgctcggaag 447
           ||||||||||| |||||
Sbjct: 445 cagtcgtcgcttggaag 461
to top
>gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, complete sequence
          Length = 128148

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 58    tcagagtaacatacattttctt 79
             ||||||||||||||||||||||
Sbjct: 87883 tcagagtaacatacattttctt 87904
to top
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 331   cgagacggaggccgtcgggctg 352
             ||||||||||||||||||||||
Sbjct: 10791 cgagacggaggccgtcgggctg 10770
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 327    gcgccgagacggaggccgtcg 347
              |||||||||||||||||||||
Sbjct: 295273 gcgccgagacggaggccgtcg 295293
to top
>dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L19
          Length = 41087

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aaaatatataaaccttaagtt 28
             |||||||||||||||||||||
Sbjct: 31292 aaaatatataaaccttaagtt 31312
to top
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete
             sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 386   ctcccgctgatcctgctgatgctg 409
             ||||| ||||||||||||||||||
Sbjct: 17901 ctcccactgatcctgctgatgctg 17924
to top
>ref|XM_469466.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1957

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            ||||| ||||||||||||||||||
Sbjct: 1630 ctcccactgatcctgctgatgctg 1607
to top
>gb|AY172320.1| Xenopus laevis germes mRNA, complete cds
          Length = 2851

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 ttcagagtaacatacatttt 76
          ||||||||||||||||||||
Sbjct: 16 ttcagagtaacatacatttt 35
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 416      gcaacttcgatgaaccagtcgtcgctcggaag 447
                ||||| ||||||||||| |||||||| |||||
Sbjct: 33280721 gcaacgtcgatgaaccaatcgtcgcttggaag 33280690



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 386      ctcccgctgatcctgctgatgctg 409
                ||||| ||||||||||||||||||
Sbjct: 28135204 ctcccactgatcctgctgatgctg 28135181



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 321     cggactgcgccgagacggaggccgtcgg 348
               ||||| |||||||||||| |||||||||
Sbjct: 2790347 cggaccgcgccgagacggtggccgtcgg 2790320
to top
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 416   gcaacttcgatgaaccagtcgtcgctcggaag 447
             ||||| ||||||||||| |||||||| |||||
Sbjct: 37237 gcaacgtcgatgaaccaatcgtcgcttggaag 37206
to top
>ref|XM_808968.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509151.110) partial mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            |||||||||||||||||| |||||
Sbjct: 1086 ctcccgctgatcctgctgctgctg 1063
to top
>gb|AF536961.1| Oryza sativa (japonica cultivar-group) putative phosphate
           transporter OsPT1 gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 321 cggactgcgccgagacggaggccgtcgg 348
           ||||| |||||||||||| |||||||||
Sbjct: 806 cggaccgcgccgagacggtggccgtcgg 833
to top
>emb|AL356750.16| Human DNA sequence from clone RP11-374F3 on chromosome 13 Contains the
              KATNAL1 gene for katanin p60 subunit A-like 1, a
              peroxiredoxin 2 (PRDX2) pseudogene, two novel genes and two
              CpG islands, complete sequence
          Length = 182303

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     gatgattcaattcagagtaa 66
              ||||||||||||||||||||
Sbjct: 117053 gatgattcaattcagagtaa 117034
to top
>emb|AL161654.14| Human DNA sequence from clone RP11-59G22 on chromosome 10 Contains part
             of a novel gene (KIAA1136) (FLJ37801) and a CpG island,
             complete sequence
          Length = 159231

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                 
Query: 193   cacacagaggcccaa-gatacagcagggaatgaata 227
             |||||||| |||||| ||||||| ||||||||||||
Sbjct: 23763 cacacagaagcccaaagatacaggagggaatgaata 23728
to top
>gb|AY286002.1| Oryza sativa (indica cultivar-group) teosinte-branching 1 (TB1) gene,
            complete cds
          Length = 3598

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            ||||| ||||||||||||||||||
Sbjct: 2377 ctcccactgatcctgctgatgctg 2354
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     cgctgatcctgctgatgctg 409
               ||||||||||||||||||||
Sbjct: 1509786 cgctgatcctgctgatgctg 1509767
to top
>gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chromosome unknown,
             complete sequence
          Length = 210950

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gatgattcaattcagagtaa 66
             ||||||||||||||||||||
Sbjct: 23946 gatgattcaattcagagtaa 23965
to top
>gb|AY043215.1| Oryza sativa teosinte branched1 protein (tb1) mRNA, complete cds
          Length = 1675

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            ||||| ||||||||||||||||||
Sbjct: 1331 ctcccactgatcctgctgatgctg 1308
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 416      gcaacttcgatgaaccagtcgtcgctcggaag 447
                ||||| ||||||||||| |||||||| |||||
Sbjct: 33371231 gcaacgtcgatgaaccaatcgtcgcttggaag 33371200



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 386      ctcccgctgatcctgctgatgctg 409
                ||||| ||||||||||||||||||
Sbjct: 28226528 ctcccactgatcctgctgatgctg 28226505



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 321     cggactgcgccgagacggaggccgtcgg 348
               ||||| |||||||||||| |||||||||
Sbjct: 2790458 cggaccgcgccgagacggtggccgtcgg 2790431
to top
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 321   cggactgcgccgagacggaggccgtcgg 348
             ||||| |||||||||||| |||||||||
Sbjct: 62303 cggaccgcgccgagacggtggccgtcgg 62276
to top
>gb|AY569607.1| Oryza sativa (japonica cultivar-group) phosphate transporter 1
           mRNA, complete cds
          Length = 1901

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 321 cggactgcgccgagacggaggccgtcgg 348
           ||||| |||||||||||| |||||||||
Sbjct: 806 cggaccgcgccgagacggtggccgtcgg 833
to top
>dbj|AK107083.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G01, full
            insert sequence
          Length = 1935

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            ||||| ||||||||||||||||||
Sbjct: 1630 ctcccactgatcctgctgatgctg 1607
to top
>dbj|AK071903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066K08, full
           insert sequence
          Length = 1833

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 321 cggactgcgccgagacggaggccgtcgg 348
           ||||| |||||||||||| |||||||||
Sbjct: 871 cggaccgcgccgagacggtggccgtcgg 898
to top
>dbj|AK070341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050L03, full
           insert sequence
          Length = 3713

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 321 cggactgcgccgagacggaggccgtcgg 348
           ||||| |||||||||||| |||||||||
Sbjct: 871 cggaccgcgccgagacggtggccgtcgg 898
to top
>dbj|AK065075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K12, full
           insert sequence
          Length = 1818

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 321 cggactgcgccgagacggaggccgtcgg 348
           ||||| |||||||||||| |||||||||
Sbjct: 871 cggaccgcgccgagacggtggccgtcgg 898
to top
>dbj|AB088343.1| Oryza sativa (japonica cultivar-group) OsTB1 gene for teosinte
            branched1 protein, complete cds
          Length = 3626

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  ctcccgctgatcctgctgatgctg 409
            ||||| ||||||||||||||||||
Sbjct: 2386 ctcccactgatcctgctgatgctg 2363
to top
>gb|AY317101.1| Liao ning virus strain LNSV-NE97-31 segment 3, complete sequence
          Length = 2404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tcgatgattcaattcagagt 64
            ||||||||||||||||||||
Sbjct: 2246 tcgatgattcaattcagagt 2227
to top
>gb|AY701341.1| Liao ning virus segment 3, complete sequence
          Length = 2404

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tcgatgattcaattcagagt 64
            ||||||||||||||||||||
Sbjct: 2246 tcgatgattcaattcagagt 2227
to top
>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete
             sequence
          Length = 158763

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   atatactctatactcactgg 146
             ||||||||||||||||||||
Sbjct: 12102 atatactctatactcactgg 12121
to top
>gb|AC002402.1|AC002402 Human Chromosome 11 pac pDJ205d23, complete sequence
          Length = 130381

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     gatgattcaattcagagtaa 66
              ||||||||||||||||||||
Sbjct: 100865 gatgattcaattcagagtaa 100846
to top
>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence
          Length = 223399

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   atatactctatactcactgg 146
             ||||||||||||||||||||
Sbjct: 56939 atatactctatactcactgg 56958
to top
>emb|AL672249.6| Mouse DNA sequence from clone RP23-92P11 on chromosome X, complete
             sequence
          Length = 191671

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   atgaatatatacagatgagg 240
             ||||||||||||||||||||
Sbjct: 82340 atgaatatatacagatgagg 82359


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,228,678
Number of Sequences: 3902068
Number of extensions: 4228678
Number of successful extensions: 73776
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73550
Number of HSP's gapped (non-prelim): 227
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top