ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14o07 |
|---|---|
| Clone Library Name | barley_pub |
>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)| Length = 605 Score = 44.7 bits (104), Expect = 3e-04 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 4/149 (2%) Frame = +3 Query: 174 RPVDD--QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKE 347 R DD Q + C +CQ + R + D+C R E + DP R+ Sbjct: 32 RSEDDPQQRYEDCRKRCQ---LETRGQTEQDKCEDRSETQLK----EEQQRDGEDPQRRY 84 Query: 348 Q-CVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQ-HHKVPARKKQCVD 521 Q C Q C + L E+ ++ + D+ C +CQ + P RK+QCV Sbjct: 85 QDCRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPERKQQCVK 144 Query: 522 ECHRREHHHPSRAACERKCSHWRDPTRXE 608 EC + P + E K WR+ E Sbjct: 145 ECREQYQEDPWKGERENK---WREEEEEE 170
>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)| Length = 588 Score = 43.9 bits (102), Expect = 4e-04 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 13/127 (10%) Frame = +3 Query: 234 PARKKQCVDECHSREHHHPSRASCERKCSHW------------RDPARK-EQCVQQCMRY 374 P R + C C + CE C DP R+ E+C Q+C + Sbjct: 38 PKRYEDCRRRCEWDTRGQKEQQQCEESCKSQYGEKDQQQRHRPEDPQRRYEECQQECRQQ 97 Query: 375 GLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 554 ++R E+ + Q + H Q + P RK+QCV EC R +P Sbjct: 98 EERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVRECRERYQENPW 157 Query: 555 RAACERK 575 R E + Sbjct: 158 RREREEE 164 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = +3 Query: 213 KCQHH-----KVPARKKQCVDECHSREHHHPSRASCERK 314 +CQ H + P RK+QCV EC R +P R E + Sbjct: 126 ECQQHCHQQEQRPERKQQCVRECRERYQENPWRREREEE 164
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)| Length = 1391 Score = 43.9 bits (102), Expect = 4e-04 Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 12/154 (7%) Frame = +3 Query: 189 QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQ--- 359 +G C + K A KK+C E +E ++ CE + ++ A K+QC + Sbjct: 963 KGKKKCKKLGKKSKRAAEKKKCA-EAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAK 1021 Query: 360 ---------QCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQ 512 QC L E + E +Q C+ + + K A KKQ Sbjct: 1022 KLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQK--QCEERAKKLKEAAEKKQ 1079 Query: 513 CVDECHRREHHHPSRAACERKCSHWRDPTRXERC 614 C +E ++E + CE + ++ ++C Sbjct: 1080 C-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQC 1112 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/143 (20%), Positives = 55/143 (38%) Frame = +3 Query: 204 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 383 C+ + + K A KKQC +E +E + CE + ++ A K+QC ++ + Sbjct: 1064 CEERAKKLKEAAEKKQC-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKK---- 1118 Query: 384 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 563 E+ AE+ C+ + K A KK+C E ++E + Sbjct: 1119 ----------EKEAAEK--------KRCEEAAKREKEAAEKKKCA-EAAKKEKEATEKQK 1159 Query: 564 CERKCSHWRDPTRXERCVQTCMR 632 C ++ ++C + R Sbjct: 1160 CAEAAKKEKEAAEKKKCAEAAKR 1182 Score = 36.6 bits (83), Expect = 0.070 Identities = 27/150 (18%), Positives = 55/150 (36%) Frame = +3 Query: 183 DDQGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQ 362 ++ +C + K KK+C +E ++E + CE+ ++ A K++C + Sbjct: 360 EEDEKKACKELAKKKKEADEKKKC-EEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEE- 417 Query: 363 CMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREH 542 A + E + C+ ++ K A KK+C E ++E Sbjct: 418 ---------------------AAKKEKEAAERKKCEELAKNIKKAAEKKKC-KEAAKKEK 455 Query: 543 HHPSRAACERKCSHWRDPTRXERCVQTCMR 632 R CE + ++C +T + Sbjct: 456 EAAERKKCEELAKKIKKAAEKKKCEETAKK 485 Score = 32.7 bits (73), Expect = 1.0 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 8/151 (5%) Frame = +3 Query: 204 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 383 C+ + K A KK+C E +E + CE ++ A +++C + + Sbjct: 671 CEKAAKKRKEAAEKKKCA-EAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKA 729 Query: 384 LXXXXXXXXIERPHAEEVEVDDQSNDSCDH------KCQH--HKVPARKKQCVDECHRRE 539 ++ A E + N KC+ K A KK+C E ++E Sbjct: 730 AEKKKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKC-KEAAKKE 788 Query: 540 HHHPSRAACERKCSHWRDPTRXERCVQTCMR 632 + CE+ ++ ++C +T + Sbjct: 789 KEAAEKKKCEKTAKKRKEEAEKKKCEKTAKK 819
>MST1_DROHY (Q08695) Axoneme-associated protein mst101(1)| Length = 344 Score = 37.4 bits (85), Expect = 0.041 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 3/146 (2%) Frame = +3 Query: 204 CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 383 C + K A KK+C E +E + C ++ A K++C + + Sbjct: 109 CAEAAKKEKEAAEKKKCA-EAAKKEKEAAEKKKCAEAAKKEKEAAEKKKCAEAAKKEKEA 167 Query: 384 LXXXXXXXXIERPHAEEVEVDDQS---NDSCDHKCQHHKVPARKKQCVDECHRREHHHPS 554 ++ E+ +Q C + K A KK+C +E ++E Sbjct: 168 AEKKKCAEAAQKKKCAELAKKEQEAAEKKKCAEAAKKEKEAAEKKKC-EERAKKEKEAAE 226 Query: 555 RAACERKCSHWRDPTRXERCVQTCMR 632 + CE + ++ ++C + + Sbjct: 227 KKKCEERAKKEKEAAEKKKCAEAAKK 252
>VCL_THECC (Q43358) Vicilin precursor| Length = 525 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 1/104 (0%) Frame = +3 Query: 303 CERKC-SHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKC 479 C+R+C S + +EQC Q+C ER + E+ + Sbjct: 45 CQRRCESEATEEREQEQCEQRC----------------EREYKEQ------------QRQ 76 Query: 480 QHHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRXER 611 Q ++ + +QC C ++ + C+RKC W ER Sbjct: 77 QEEELQRQYQQCQGRCQEQQQGQREQQQCQRKC--WEQYKEQER 118
>TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein)| Length = 442 Score = 31.6 bits (70), Expect = 2.2 Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 12/125 (9%) Frame = +3 Query: 186 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC--- 353 D D C +KC HKV + C SR+H P + HW P+ +C Sbjct: 83 DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKCKPC 142 Query: 354 --VQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQSNDSCDHKC------QHHKVPARKK 509 Q M G + +E HA N CD C + K A K Sbjct: 143 PVAQSAMVCGSDGHTYTSKCKLEF-HA--CSTGKSLNSLCDGPCPCLPEPEPLKPKAEKS 199 Query: 510 QCVDE 524 C D+ Sbjct: 200 ACTDK 204
>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1911 Score = 30.8 bits (68), Expect = 3.8 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 1/125 (0%) Frame = +3 Query: 207 DIKCQHHKVPARKKQ-CVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLN 383 D +C H +P+ Q C +C R ++ C +C CM+Y ++ Sbjct: 884 DKECDHLPLPSFVTQSCNTDCELRGMLLAKKSECSSQCGQGY-----RTLDIHCMKYSIH 938 Query: 384 LXXXXXXXXIERPHAEEVEVDDQSNDSCDHKCQHHKVPARKKQCVDECHRREHHHPSRAA 563 + V+VDD H C P ++ C C H+ + Sbjct: 939 -------------EGQTVQVDD-------HYCGDQLKPPTQELCHGNCVFTRWHYSEWSQ 978 Query: 564 CERKC 578 C R C Sbjct: 979 CSRSC 983
>TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein)| Length = 439 Score = 30.8 bits (68), Expect = 3.8 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +3 Query: 186 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC 353 D D C +KC HKV + C SR+H P + HW P+ +C Sbjct: 80 DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAQKHWVGPSNLVKC 136
>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor| Length = 639 Score = 30.8 bits (68), Expect = 3.8 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 13/113 (11%) Frame = +3 Query: 276 EHHHPSRASCERKCSHWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAEEVEVDDQS 455 E +PS C R C+ +D R + C +C + I RP + E + Q Sbjct: 29 EKQNPSHNKCLRSCNSEKDSYRNQACHARCNLLKVEEEEECEEGQIPRPRPQHPERERQQ 88 Query: 456 NDSCD-------------HKCQHHKVPARKKQCVDECHRREHHHPSRAACERK 575 + + Q H+ +++ E HR+E H + + E + Sbjct: 89 HGEKEEDEGEQPRPFPFPRPRQPHQEEEHEQKEEHEWHRKEEKHGGKGSEEEQ 141
>MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Maleylacetate| reductase I) Length = 357 Score = 30.0 bits (66), Expect = 6.5 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -1 Query: 360 AARTVPSLPGLSNGYTSSRKTPCLGDDAPGCGTRRRTVSSSPE--LYDV 220 AART L Y S TP LG+ G T R T++ PE +YDV Sbjct: 109 AARTGVDQVILPTTYAGSEVTPVLGETVEGRKTTRSTLAVLPETVIYDV 157
>VNCS_PAVPN (P18547) Noncapsid protein NS-1 (Nonstructural protein NS1)| Length = 660 Score = 29.6 bits (65), Expect = 8.5 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 469 TTSANIIKFRRGRSSAWTSATDGSIITRAGRLARGSVAI 585 TT A +I +RG ++W ATD + L +G V I Sbjct: 52 TTDAEMINLQRGAETSWDQATDMEWESEIDSLTKGQVLI 90
>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 Score = 29.6 bits (65), Expect = 8.5 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 201 SCDIKCQHHK--VPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRY 374 +CD CQH+ P K+ C E SC+ +C R+ C QC +Y Sbjct: 45 NCDYNCQHYMECCPDFKRVCSPEL-----------SCKGRCFESFARGRECDCDSQCKQY 93 Query: 375 G 377 G Sbjct: 94 G 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,975,878 Number of Sequences: 219361 Number of extensions: 1627255 Number of successful extensions: 5526 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5499 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
