ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 531 e-148
2gb|AY104440.1| Zea mays PCO131508 mRNA sequence 458 e-126
3gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
6gb|BT016950.1| Zea mays clone E04912705B06.c mRNA sequence 119 1e-23
7ref|NM_111204.3| Arabidopsis thaliana oxidoreductase AT3G03330 m... 72 2e-09
8gb|BT000550.1| Arabidopsis thaliana unknown protein (At3g03330/... 72 2e-09
9gb|AY127020.1| Arabidopsis thaliana AT3g03330/T21P5_25 mRNA, com... 72 2e-09
10ref|NM_111206.2| Arabidopsis thaliana oxidoreductase AT3G03350 m... 70 8e-09
11gb|BT004131.1| Arabidopsis thaliana clone RAFL15-09-P04 (R20704)... 70 8e-09
12emb|BX842258.1|CNS09YBZ Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
13gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosom... 46 0.12
14gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, com... 46 0.12
15emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in... 46 0.12
16gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosom... 46 0.12
17ref|XM_510689.1| PREDICTED: Pan troglodytes similar to proline-s... 44 0.48
18gb|AC009895.4|ATAC009895 Arabidopsis thaliana chromosome III BAC... 44 0.48
19gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Ca... 42 1.9
20dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.9
21gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, co... 40 7.5
22ref|XM_950503.1| Encephalitozoon cuniculi GB-M1 DNA polymerase d... 40 7.5
23gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, com... 40 7.5
24ref|NM_024577.3| Homo sapiens SH3 domain and tetratricopeptide r... 40 7.5
25gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome... 40 7.5
26gb|AC007610.10| Homo sapiens chromosome 16 clone RP11-429P3, com... 40 7.5
27gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence 40 7.5
28emb|AL845154.5| Human DNA sequence from clone XX-2002C15 on chro... 40 7.5
29emb|AL606808.4| Human DNA sequence from clone RP11-101F8 on chro... 40 7.5
30emb|AJ400815.1|STU400815 Solanum tuberosum mRNA for putative tro... 40 7.5
31emb|AJ307584.1|STU307584 Solanum tuberosum mRNA for tropinone re... 40 7.5
32gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, co... 40 7.5
33gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cance... 40 7.5
34gb|AC073175.4| Homo sapiens chromosome 05 clone RP11-319P13, com... 40 7.5
35gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, com... 40 7.5
36gb|AC090142.3| Homo sapiens chromosome 8, clone RP11-200A13, com... 40 7.5
37gb|AC021498.12| Homo sapiens chromosome 8, clone RP11-127H5, com... 40 7.5
38gb|AC091940.3| Homo sapiens chromosome 5 clone RP11-331K21, comp... 40 7.5
39gb|AC011364.4| Homo sapiens chromosome 5 clone CTC-529P8, comple... 40 7.5
40gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, comp... 40 7.5
41gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137... 40 7.5
42gb|AC010227.5|AC010227 Homo sapiens chromosome 5 clone CTC-289C9... 40 7.5
43gb|AC008893.4|AC008893 Homo sapiens chromosome 5 clone CTD-2228J... 40 7.5
44dbj|AB070621.1| Homo sapiens HTR4 gene for 5-hydroxytryptamine 4... 40 7.5
45gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, compl... 40 7.5
46dbj|AK112642.1| Ciona intestinalis cDNA, clone:cieg022i19, full ... 40 7.5
47emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encepha... 40 7.5
48emb|AL162891.4|CNS01RI6 Human chromosome 14 DNA sequence BAC R-3... 40 7.5
49emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 7.5
50dbj|AP004386.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.5 
>dbj|AK102327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090L02, full
           insert sequence
          Length = 1245

 Score =  531 bits (268), Expect = e-148
 Identities = 473/540 (87%), Gaps = 1/540 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  aaggttgtgtggataacgggnagcgagccgtgggattggggaggttctttcgatgcagtt 71
           |||||||||||||| || || ||| ||||| ||||| ||||| |||||| | ||||| ||
Sbjct: 283 aaggttgtgtggatcactgg-agccagccgcgggataggggaagttcttgcaatgcaatt 341

                                                                       
Query: 72  tgcgagtttaggagcaaagctcatactatctgcacgtaacaaggaggagcttgagagagt 131
           ||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 342 tgctagtttaggagcaaagctgatactatctgctcggaacaaggaggagcttgagagagt 401

                                                                       
Query: 132 gaaacataacatcatgagcaagcatccagatagcaaagttgaagtgttacccatggattt 191
           ||||||||||||||| | |||||||||| |||||| ||||||||| ||||||||||||||
Sbjct: 402 gaaacataacatcatcaacaagcatccaaatagcagagttgaagtattacccatggattt 461

                                                                       
Query: 192 atcatctgatgaaaaatctctgaaagaagttgtacattcagcggaatctctcttttccag 251
           |||||| | |||| | |||||||||||   |||||||  ||| || || ||||| |||| 
Sbjct: 462 atcatcgggtgaagagtctctgaaagagcatgtacatgaagcagagtcactcttctccaa 521

                                                                       
Query: 252 tgctggcattgactatatgatgcacaatgcagcctttgagcgtccaaaaaggggagccct 311
           ||| ||| ||||||||||||| || |||||||| |||||||||||||||||| | || ||
Sbjct: 522 tgcaggcgttgactatatgatccataatgcagcatttgagcgtccaaaaaggagggctct 581

                                                                       
Query: 312 ggaagaaaccgaggaaggtcttaaggctacttttaaggtcaatgtctttggaacaattac 371
           ||||||||| ||  |||||||||||||||||||| | |||||||||||||| || |||||
Sbjct: 582 ggaagaaactgaacaaggtcttaaggctacttttgatgtcaatgtctttggtactattac 641

                                                                       
Query: 372 tttgactcgccttcttgcacccttcatgttggatagagggatgggtcattttgttgtgat 431
           | | |||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||
Sbjct: 642 tctaactcgccttcttgcaccctcaatgatggatagagggatgggccattttgttgtgat 701

                                                                       
Query: 432 gagtagtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaaaca 491
           ||||||||||||||||||||| ||  ||||||| ||||||||||| || || ||||||||
Sbjct: 702 gagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaaaca 761

                                                                       
Query: 492 tgctctcaatgggtactttgcttctctgcgttctgagttatgtacgaaaggcattaaggt 551
           ||| |||||||| || ||| |||||||||| |||||||||||||| ||||||||||||||
Sbjct: 762 tgccctcaatggctatttttcttctctgcgctctgagttatgtacaaaaggcattaaggt 821
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>gb|AY104440.1| Zea mays PCO131508 mRNA sequence
          Length = 1384

 Score =  458 bits (231), Expect = e-126
 Identities = 466/543 (85%), Gaps = 1/543 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggcaaggttgtgtggataacgggnagcgagccgtgggattggggaggttctttcgatgca 68
           |||||||| |||||||| || || ||| ||||| |||||||||||||||||| | |||||
Sbjct: 257 ggcaaggtcgtgtggattactgg-agctagccgcgggattggggaggttcttgcaatgca 315

                                                                       
Query: 69  gtttgcgagtttaggagcaaagctcatactatctgcacgtaacaaggaggagcttgagag 128
            || || | ||||||||||||||| ||||||||||||||||||||||| | ||||| |||
Sbjct: 316 cttcgcaaatttaggagcaaagctgatactatctgcacgtaacaaggacgcgcttgcgag 375

                                                                       
Query: 129 agtgaaacataacatcatgagcaagcatccagatagcaaagttgaagtgttacccatgga 188
           ||||||| | |||||| | |||||| |||||||||||| ||||||| |||||||||||||
Sbjct: 376 agtgaaaaaaaacatcctcagcaagaatccagatagcagagttgaaatgttacccatgga 435

                                                                       
Query: 189 tttatcatctgatgaaaaatctctgaaagaagttgtacattcagcggaatctctcttttc 248
           ||||||| ||| |||| |||||||||||||||| ||||||   || |||||  | |||||
Sbjct: 436 tttatcagctggtgaagaatctctgaaagaagtcgtacatgtggcagaatcatttttttc 495

                                                                       
Query: 249 cagtgctggcattgactatatgatgcacaatgcagcctttgagcgtccaaaaaggggagc 308
            | ||| ||| ||||||||||| | || ||||||||||| || ||||| ||| || | ||
Sbjct: 496 taatgcaggcgttgactatatggtccataatgcagccttcgaacgtcctaaacggagggc 555

                                                                       
Query: 309 cctggaagaaaccgaggaaggtcttaaggctacttttaaggtcaatgtctttggaacaat 368
            || |||||||  |||||||||||||||||||| || || ||||||||||| ||||| ||
Sbjct: 556 tctagaagaaagtgaggaaggtcttaaggctacattgaatgtcaatgtcttcggaactat 615

                                                                       
Query: 369 tactttgactcgccttcttgcacccttcatgttggatagagggatgggtcattttgttgt 428
           |||||| ||||||||||| ||||| | |||| | ||||||| |||||| |||||||||||
Sbjct: 616 tactttaactcgccttctagcaccttacatgcttgatagagagatgggccattttgttgt 675

                                                                       
Query: 429 gatgagtagtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaa 488
           |||||||||||| ||||||||||| ||  | |||||||||||  |||||||||| |||||
Sbjct: 676 gatgagtagtgctgctggaaaggttcctgctcctggtcaggccatttactctgcctccaa 735

                                                                       
Query: 489 acatgctctcaatgggtactttgcttctctgcgttctgagttatgtacgaaaggcattaa 548
           ||||||||| ||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 736 acatgctcttaatggttactttgcttctctgcgatctgagttgtgtacaaaaggcattaa 795

              
Query: 549 ggt 551
           |||
Sbjct: 796 ggt 798
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>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0055D24 map C535, complete sequence
          Length = 174759

 Score =  131 bits (66), Expect = 3e-27
 Identities = 90/98 (91%)
 Strand = Plus / Minus

                                                                         
Query: 49    ggggaggttctttcgatgcagtttgcgagtttaggagcaaagctcatactatctgcacgt 108
             ||||| |||||| | ||||| ||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 41631 ggggaagttcttgcaatgcaatttgctagtttaggagcaaagctgatactatctgctcgg 41572

                                                   
Query: 109   aacaaggaggagcttgagagagtgaaacataacatcat 146
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 41571 aacaaggaggagcttgagagagtgaaacataacatcat 41534



 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Minus

                                                                         
Query: 150   caagcatccagatagcaaagttgaagtgttacccatggatttatcatctgatgaaaaatc 209
             |||||||||| |||||| ||||||||| |||||||||||||||||||| | |||| | ||
Sbjct: 41417 caagcatccaaatagcagagttgaagtattacccatggatttatcatcgggtgaagagtc 41358

                                                                         
Query: 210   tctgaaagaagttgtacattcagcggaatctctcttttccagtgctggcattgactatat 269
             |||||||||   |||||||  ||| || || ||||| |||| ||| ||| ||||||||||
Sbjct: 41357 tctgaaagagcatgtacatgaagcagagtcactcttctccaatgcaggcgttgactatat 41298

                                         
Query: 270   gatgcacaatgcagcctttgagcgtcca 297
             ||| || |||||||| ||||||||||||
Sbjct: 41297 gatccataatgcagcatttgagcgtcca 41270



 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                         
Query: 335   aggctacttttaaggtcaatgtctttggaacaattactttgactcgccttcttgcaccct 394
             ||||||||||| | |||||||||||||| || |||||| | |||||||||||||||||||
Sbjct: 40963 aggctacttttgatgtcaatgtctttggtactattactctaactcgccttcttgcaccct 40904

                                                
Query: 395   tcatgttggatagagggatgggtcattttgttgtg 429
               ||| |||||||||||||||| ||||||||||||
Sbjct: 40903 caatgatggatagagggatgggccattttgttgtg 40869



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 429   gatgagtagtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaa 488
             |||||||||||||||||||||||| ||  ||||||| ||||||||||| || || |||||
Sbjct: 40780 gatgagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaa 40721

                                                     
Query: 489   acatgctctcaatgggtactttgcttctctgcgttctgag 528
             |||||| |||||||| || ||| |||||||||| ||||||
Sbjct: 40720 acatgccctcaatggctatttttcttctctgcgctctgag 40681



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 527   agttatgtacgaaaggcattaaggt 551
             |||||||||| ||||||||||||||
Sbjct: 40066 agttatgtacaaaaggcattaaggt 40042
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 3e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                           
Query: 49      ggggaggttctttcgatgcagtttgcgagtttaggagcaaagctcatactatctgcacgt 108
               ||||| |||||| | ||||| ||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 8976596 ggggaagttcttgcaatgcaatttgctagtttaggagcaaagctgatactatctgctcgg 8976655

                                                     
Query: 109     aacaaggaggagcttgagagagtgaaacataacatcat 146
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 8976656 aacaaggaggagcttgagagagtgaaacataacatcat 8976693



 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Plus

                                                                           
Query: 150     caagcatccagatagcaaagttgaagtgttacccatggatttatcatctgatgaaaaatc 209
               |||||||||| |||||| ||||||||| |||||||||||||||||||| | |||| | ||
Sbjct: 8976810 caagcatccaaatagcagagttgaagtattacccatggatttatcatcgggtgaagagtc 8976869

                                                                           
Query: 210     tctgaaagaagttgtacattcagcggaatctctcttttccagtgctggcattgactatat 269
               |||||||||   |||||||  ||| || || ||||| |||| ||| ||| ||||||||||
Sbjct: 8976870 tctgaaagagcatgtacatgaagcagagtcactcttctccaatgcaggcgttgactatat 8976929

                                           
Query: 270     gatgcacaatgcagcctttgagcgtcca 297
               ||| || |||||||| ||||||||||||
Sbjct: 8976930 gatccataatgcagcatttgagcgtcca 8976957



 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                           
Query: 335     aggctacttttaaggtcaatgtctttggaacaattactttgactcgccttcttgcaccct 394
               ||||||||||| | |||||||||||||| || |||||| | |||||||||||||||||||
Sbjct: 8977264 aggctacttttgatgtcaatgtctttggtactattactctaactcgccttcttgcaccct 8977323

                                                  
Query: 395     tcatgttggatagagggatgggtcattttgttgtg 429
                 ||| |||||||||||||||| ||||||||||||
Sbjct: 8977324 caatgatggatagagggatgggccattttgttgtg 8977358



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                           
Query: 429     gatgagtagtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaa 488
               |||||||||||||||||||||||| ||  ||||||| ||||||||||| || || |||||
Sbjct: 8977447 gatgagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaa 8977506

                                                       
Query: 489     acatgctctcaatgggtactttgcttctctgcgttctgag 528
               |||||| |||||||| || ||| |||||||||| ||||||
Sbjct: 8977507 acatgccctcaatggctatttttcttctctgcgctctgag 8977546



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 527     agttatgtacgaaaggcattaaggt 551
               |||||||||| ||||||||||||||
Sbjct: 8978161 agttatgtacaaaaggcattaaggt 8978185
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 3e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                           
Query: 49      ggggaggttctttcgatgcagtttgcgagtttaggagcaaagctcatactatctgcacgt 108
               ||||| |||||| | ||||| ||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 9048259 ggggaagttcttgcaatgcaatttgctagtttaggagcaaagctgatactatctgctcgg 9048318

                                                     
Query: 109     aacaaggaggagcttgagagagtgaaacataacatcat 146
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 9048319 aacaaggaggagcttgagagagtgaaacataacatcat 9048356



 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Plus

                                                                           
Query: 150     caagcatccagatagcaaagttgaagtgttacccatggatttatcatctgatgaaaaatc 209
               |||||||||| |||||| ||||||||| |||||||||||||||||||| | |||| | ||
Sbjct: 9048473 caagcatccaaatagcagagttgaagtattacccatggatttatcatcgggtgaagagtc 9048532

                                                                           
Query: 210     tctgaaagaagttgtacattcagcggaatctctcttttccagtgctggcattgactatat 269
               |||||||||   |||||||  ||| || || ||||| |||| ||| ||| ||||||||||
Sbjct: 9048533 tctgaaagagcatgtacatgaagcagagtcactcttctccaatgcaggcgttgactatat 9048592

                                           
Query: 270     gatgcacaatgcagcctttgagcgtcca 297
               ||| || |||||||| ||||||||||||
Sbjct: 9048593 gatccataatgcagcatttgagcgtcca 9048620



 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                           
Query: 335     aggctacttttaaggtcaatgtctttggaacaattactttgactcgccttcttgcaccct 394
               ||||||||||| | |||||||||||||| || |||||| | |||||||||||||||||||
Sbjct: 9048927 aggctacttttgatgtcaatgtctttggtactattactctaactcgccttcttgcaccct 9048986

                                                  
Query: 395     tcatgttggatagagggatgggtcattttgttgtg 429
                 ||| |||||||||||||||| ||||||||||||
Sbjct: 9048987 caatgatggatagagggatgggccattttgttgtg 9049021



 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                           
Query: 429     gatgagtagtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaa 488
               |||||||||||||||||||||||| ||  ||||||| ||||||||||| || || |||||
Sbjct: 9049110 gatgagtagtgcagctggaaaggttccatcacctggccaggctctttattcagcctccaa 9049169

                                                       
Query: 489     acatgctctcaatgggtactttgcttctctgcgttctgag 528
               |||||| |||||||| || ||| |||||||||| ||||||
Sbjct: 9049170 acatgccctcaatggctatttttcttctctgcgctctgag 9049209



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 527     agttatgtacgaaaggcattaaggt 551
               |||||||||| ||||||||||||||
Sbjct: 9049824 agttatgtacaaaaggcattaaggt 9049848
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>gb|BT016950.1| Zea mays clone E04912705B06.c mRNA sequence
          Length = 728

 Score =  119 bits (60), Expect = 1e-23
 Identities = 84/92 (91%)
 Strand = Plus / Minus

                                                                       
Query: 460 cctggtcaggctctttactctgcttccaaacatgctctcaatgggtactttgcttctctg 519
           |||||||||||  |||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 711 cctggtcaggccatttactctgcctccaaacatgctcttaatggttactttgcttctctg 652

                                           
Query: 520 cgttctgagttatgtacgaaaggcattaaggt 551
           || |||||||| ||||| ||||||||||||||
Sbjct: 651 cgatctgagttgtgtacaaaaggcattaaggt 620
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>ref|NM_111204.3| Arabidopsis thaliana oxidoreductase AT3G03330 mRNA, complete cds
          Length = 1249

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 414 gggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctct 473
           |||||||||||||||||| || ||||| || |||||||| ||  ||||||| |||||| |
Sbjct: 553 gggtcattttgttgtgataagcagtgctgcaggaaaggtaccatcacctggacaggctat 612

                                   
Query: 474 ttactctgcttccaaacatgctct 497
            || |||||||| |||||||||||
Sbjct: 613 atattctgcttcaaaacatgctct 636
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>gb|BT000550.1| Arabidopsis thaliana unknown protein  (At3g03330/T21P5_25) mRNA,
           complete cds
          Length = 987

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 414 gggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctct 473
           |||||||||||||||||| || ||||| || |||||||| ||  ||||||| |||||| |
Sbjct: 531 gggtcattttgttgtgataagcagtgctgcaggaaaggtaccatcacctggacaggctat 590

                                   
Query: 474 ttactctgcttccaaacatgctct 497
            || |||||||| |||||||||||
Sbjct: 591 atattctgcttcaaaacatgctct 614
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>gb|AY127020.1| Arabidopsis thaliana AT3g03330/T21P5_25 mRNA, complete cds
          Length = 1251

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 414 gggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctct 473
           |||||||||||||||||| || ||||| || |||||||| ||  ||||||| |||||| |
Sbjct: 542 gggtcattttgttgtgataagcagtgctgcaggaaaggtaccatcacctggacaggctat 601

                                   
Query: 474 ttactctgcttccaaacatgctct 497
            || |||||||| |||||||||||
Sbjct: 602 atattctgcttcaaaacatgctct 625
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>ref|NM_111206.2| Arabidopsis thaliana oxidoreductase AT3G03350 mRNA, complete cds
          Length = 546

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 415 ggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctctt 474
           ||||||||||||||||| || ||||| || |||||||| ||  ||||||| |||||| | 
Sbjct: 331 ggtcattttgttgtgataagcagtgctgcaggaaaggtaccatcacctggacaggctata 390

                                  
Query: 475 tactctgcttccaaacatgctct 497
           || |||||||| |||||||||||
Sbjct: 391 tattctgcttcaaaacatgctct 413
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>gb|BT004131.1| Arabidopsis thaliana clone RAFL15-09-P04 (R20704) unknown protein
           (At3g03360) mRNA, complete cds
          Length = 2820

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 415 ggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctctt 474
           ||||||||||||||||| || ||||| || |||||||| ||  ||||||| |||||| | 
Sbjct: 475 ggtcattttgttgtgataagcagtgctgcaggaaaggtaccatcacctggacaggctata 534

                                  
Query: 475 tactctgcttccaaacatgctct 497
           || |||||||| |||||||||||
Sbjct: 535 tattctgcttcaaaacatgctct 557
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>emb|BX842258.1|CNS09YBZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS7ZA10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 918

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 415 ggtcattttgttgtgatgagtagtgcagctggaaaggtgcccacacctggtcaggctctt 474
           ||||||||||||||||| || ||||| || ||| |||| ||  ||||||| |||||| | 
Sbjct: 454 ggtcattttgttgtgataagcagtgctgcaggagaggtaccatcacctggacaggctata 513

                                  
Query: 475 tactctgcttccaaacatgctct 497
           || ||||||||  ||||||||||
Sbjct: 514 tattctgcttcagaacatgctct 536
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>gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosome 5, complete sequence
          Length = 198336

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 388   gcacccttcatgttggatagagg 410
             |||||||||||||||||||||||
Sbjct: 21509 gcacccttcatgttggatagagg 21487
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>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 388   gcacccttcatgttggatagagg 410
             |||||||||||||||||||||||
Sbjct: 98764 gcacccttcatgttggatagagg 98786
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>emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in linkage group 24,
              complete sequence
          Length = 215186

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 261    tgactatatgatgcacaatgcagcctttgag 291
              ||||||||| ||||| |||||||||||||||
Sbjct: 162491 tgactatattatgcataatgcagcctttgag 162521
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>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete sequence
          Length = 168439

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 388    gcacccttcatgttggatagagg 410
              |||||||||||||||||||||||
Sbjct: 109657 gcacccttcatgttggatagagg 109635
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>ref|XM_510689.1| PREDICTED: Pan troglodytes similar to proline-serine-threonine
           phosphatase interacting protein 1; CD2 cytoplasmic
           tail-binding protein; Pyogenic sterile arthritis,
           pyoderma gangrenosum, and acne (PAPA syndrome)
           (LOC453768), mRNA
          Length = 2622

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 296 caaaaaggggagccctggaaga 317
           ||||||||||||||||||||||
Sbjct: 749 caaaaaggggagccctggaaga 770
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>gb|AC009895.4|ATAC009895 Arabidopsis thaliana chromosome III BAC T21P5 genomic sequence,
             complete sequence
          Length = 82289

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 436   agtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaaacatgct 495
             ||||| || |||||||| ||  ||||||| |||||| | || |||||||| |||||||||
Sbjct: 75469 agtgctgcaggaaaggtaccatcacctggacaggctatatattctgcttcaaaacatgct 75528

               
Query: 496   ct 497
             ||
Sbjct: 75529 ct 75530



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 436   agtgcagctggaaaggtgcccacacctggtcaggctctttactctgcttccaaacatgct 495
             ||||| || |||||||| ||  ||||||| |||||| | || |||||||| |||||||||
Sbjct: 66161 agtgctgcaggaaaggtaccatcacctggacaggctatatattctgcttcaaaacatgct 66102

               
Query: 496   ct 497
             ||
Sbjct: 66101 ct 66100
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>gb|AC026116.26| Homo sapiens 12 BAC RP11-1022B3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177267

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    atttatcatctgatgaaaaat 208
              |||||||||||||||||||||
Sbjct: 135294 atttatcatctgatgaaaaat 135314
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>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131,
             complete sequence
          Length = 93645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 473   tttactctgcttccaaacatg 493
             |||||||||||||||||||||
Sbjct: 18990 tttactctgcttccaaacatg 18970
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>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence
          Length = 222121

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   atgcacaatgcagcctttga 290
             ||||||||||||||||||||
Sbjct: 51041 atgcacaatgcagcctttga 51060
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>ref|XM_950503.1| Encephalitozoon cuniculi GB-M1 DNA polymerase delta catalytic subunit
            (ECU09_0430) partial mRNA
          Length = 2925

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 112  aaggaggagcttgagagagtgaaa 135
            ||||||||||||||||||| ||||
Sbjct: 1645 aaggaggagcttgagagagagaaa 1668
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>gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, complete sequence
          Length = 177924

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ttttccagtgctggcattga 263
             ||||||||||||||||||||
Sbjct: 24337 ttttccagtgctggcattga 24356
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>ref|NM_024577.3| Homo sapiens SH3 domain and tetratricopeptide repeats 2 (SH3TC2),
           mRNA
          Length = 26588

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgcacaatgcagcctttga 290
           ||||||||||||||||||||
Sbjct: 23  atgcacaatgcagcctttga 4
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>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence
          Length = 193151

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   tttggaacaattactttgac 377
             ||||||||||||||||||||
Sbjct: 96330 tttggaacaattactttgac 96349
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>gb|AC007610.10| Homo sapiens chromosome 16 clone RP11-429P3, complete sequence
          Length = 214786

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   gtgaaacataacatcatgag 149
             ||||||||||||||||||||
Sbjct: 71388 gtgaaacataacatcatgag 71407
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>gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence
          Length = 197860

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    ttttccagtgctggcattga 263
              ||||||||||||||||||||
Sbjct: 147727 ttttccagtgctggcattga 147746
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>emb|AL845154.5| Human DNA sequence from clone XX-2002C15 on chromosome 13 Contains
            the 3' end of the gene for a novel protein (KIAA1802) and
            a novel gene, complete sequence
          Length = 26737

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  ctgatgaaaaatctctgaaa 216
            ||||||||||||||||||||
Sbjct: 4111 ctgatgaaaaatctctgaaa 4092
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>emb|AL606808.4| Human DNA sequence from clone RP11-101F8 on chromosome 13 Contains part
             of a novel gene, complete sequence
          Length = 45785

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   tttatcatctgatgaaaaat 208
             ||||||||||||||||||||
Sbjct: 10309 tttatcatctgatgaaaaat 10328
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>emb|AJ400815.1|STU400815 Solanum tuberosum mRNA for putative tropinone reductase (TR gene)
          Length = 976

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 ctctttactctgcttccaaa 489
           ||||||||||||||||||||
Sbjct: 508 ctctttactctgcttccaaa 527
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>emb|AJ307584.1|STU307584 Solanum tuberosum mRNA for tropinone reductase I (TRI gene)
          Length = 795

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 470 ctctttactctgcttccaaa 489
           ||||||||||||||||||||
Sbjct: 479 ctctttactctgcttccaaa 498
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>gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, complete sequence
          Length = 207258

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   tcttttccagtgctggcatt 261
             ||||||||||||||||||||
Sbjct: 22795 tcttttccagtgctggcatt 22776
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>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    tttatcatctgatgaaaaat 208
              ||||||||||||||||||||
Sbjct: 161050 tttatcatctgatgaaaaat 161069
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>gb|AC073175.4| Homo sapiens chromosome 05 clone RP11-319P13, complete sequence
          Length = 173707

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   tttggaacaattactttgac 377
             ||||||||||||||||||||
Sbjct: 41111 tttggaacaattactttgac 41130
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>gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, complete sequence
          Length = 166985

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   tggatttatcatctgatgaaaaat 208
             ||||||| ||||||||||||||||
Sbjct: 33456 tggatttttcatctgatgaaaaat 33433
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>gb|AC090142.3| Homo sapiens chromosome 8, clone RP11-200A13, complete sequence
          Length = 197877

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    gtcaatgtctttggaacaat 368
              ||||||||||||||||||||
Sbjct: 164040 gtcaatgtctttggaacaat 164021
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>gb|AC021498.12| Homo sapiens chromosome 8, clone RP11-127H5, complete sequence
          Length = 160883

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    gtcaatgtctttggaacaat 368
              ||||||||||||||||||||
Sbjct: 158376 gtcaatgtctttggaacaat 158395
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>gb|AC091940.3| Homo sapiens chromosome 5 clone RP11-331K21, complete sequence
          Length = 143702

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  atgcacaatgcagcctttga 290
            ||||||||||||||||||||
Sbjct: 3777 atgcacaatgcagcctttga 3796
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>gb|AC011364.4| Homo sapiens chromosome 5 clone CTC-529P8, complete sequence
          Length = 122394

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgcacaatgcagcctttga 290
              ||||||||||||||||||||
Sbjct: 103354 atgcacaatgcagcctttga 103373
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>gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, complete sequence
          Length = 184194

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   tttggaacaattactttgac 377
             ||||||||||||||||||||
Sbjct: 11264 tttggaacaattactttgac 11245
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>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence
          Length = 192814

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    gtgaaacataacatcatgag 149
              ||||||||||||||||||||
Sbjct: 188402 gtgaaacataacatcatgag 188421
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>gb|AC010227.5|AC010227 Homo sapiens chromosome 5 clone CTC-289C9, complete sequence
          Length = 106320

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  tttggaacaattactttgac 377
            ||||||||||||||||||||
Sbjct: 7723 tttggaacaattactttgac 7742
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>gb|AC008893.4|AC008893 Homo sapiens chromosome 5 clone CTD-2228J24, complete sequence
          Length = 94995

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   tttggaacaattactttgac 377
             ||||||||||||||||||||
Sbjct: 70884 tttggaacaattactttgac 70865
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>dbj|AB070621.1| Homo sapiens HTR4 gene for 5-hydroxytryptamine 4 receptor, promoter
           and exon 1
          Length = 660

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgcacaatgcagcctttga 290
           ||||||||||||||||||||
Sbjct: 432 atgcacaatgcagcctttga 413
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>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence
          Length = 189528

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgcacaatgcagcctttga 290
              ||||||||||||||||||||
Sbjct: 179196 atgcacaatgcagcctttga 179215
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>dbj|AK112642.1| Ciona intestinalis cDNA, clone:cieg022i19, full insert sequence
          Length = 2147

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 114  ggaggagcttgagagagtgaaaca 137
            ||||||||| ||||||||||||||
Sbjct: 1992 ggaggagctggagagagtgaaaca 2015
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>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 251002

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   aaggaggagcttgagagagtgaaa 135
             ||||||||||||||||||| ||||
Sbjct: 58717 aaggaggagcttgagagagagaaa 58740
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>emb|AL162891.4|CNS01RI6 Human chromosome 14 DNA sequence BAC R-353P15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163452

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    aaaaatctctgaaagaagtt 222
              ||||||||||||||||||||
Sbjct: 144517 aaaaatctctgaaagaagtt 144536
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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
              sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    tagtgcagctggaaaggtgc 454
              ||||||||||||||||||||
Sbjct: 132994 tagtgcagctggaaaggtgc 133013
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>dbj|AP004386.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1154F4
          Length = 159598

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   gtcaatgtctttggaacaat 368
             ||||||||||||||||||||
Sbjct: 16456 gtcaatgtctttggaacaat 16475


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,779,179
Number of Sequences: 3902068
Number of extensions: 4779179
Number of successful extensions: 84791
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84642
Number of HSP's gapped (non-prelim): 147
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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