>MARH3_RAT (Q5XIE5) Membrane-associated RING finger protein 3|
           (Membrane-associated RING-CH protein III) (MARCH-III)
          Length = 253

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +1

Query: 37  STSQHLLDSCNCGACMGTLYSSSFQH-------RFCQLCQ*KYS 147
           S+ + LL  C C   +GT++ S  +H        +C+LC  +++
Sbjct: 78  SSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121

>MARH3_HUMAN (Q86UD3) Membrane-associated RING finger protein 3|
           (Membrane-associated RING-CH protein III) (MARCH-III)
           (RING finger protein 173)
          Length = 253

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +1

Query: 37  STSQHLLDSCNCGACMGTLYSSSFQH-------RFCQLCQ*KYS 147
           S+ + LL  C C   +GT++ S  +H        +C+LC  +++
Sbjct: 78  SSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121

>MARH3_MOUSE (Q8BRX9) Membrane-associated RING finger protein 3|
           (Membrane-associated RING-CH protein III) (MARCH-III)
          Length = 218

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +1

Query: 37  STSQHLLDSCNCGACMGTLYSSSFQH-------RFCQLCQ*KYS 147
           S+ + LL  C C   +GT++ S  +H        +C+LC  +++
Sbjct: 78  SSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121

>ARAQ_BACHD (Q9KEE9) L-arabinose transport system permease protein araQ (EC|
           3.6.3.17)
          Length = 279

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +3

Query: 42  FSAPAGLVQLWCLYGYSLFIFIPASLLSIVPIEIF-----RWVIAGV 167
           F+ P GL  L   YG +  I +  S+++IVPI I      R+ IAG+
Sbjct: 226 FTLPIGLATLLTPYGNNYDILLAGSVMTIVPIVILFIFFQRYFIAGL 272

>TLE6_HUMAN (Q9H808) Transducin-like enhancer protein 6|
          Length = 449

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -3

Query: 290 QNSQPQLQQEYPCNDQKPPLPGV*DVGTEIDSNEGSRHKPSDTSNNPSE 144
           + ++P+ +Q+ P   Q+   PG  D GT+    + S  +P + S++P E
Sbjct: 50  EKAKPRDRQQAPGLGQESKAPGSCDPGTDPCPEDASTPRPPEASSSPPE 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,638,785
Number of Sequences: 219361
Number of extensions: 1781108
Number of successful extensions: 4689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4683
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)