| Clone Name | bags15c11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009491.1| Triticum aestivum clone wr1.pk0067.h2:fis, full insert mRNA sequence Length = 1617 Score = 313 bits (158), Expect = 1e-82 Identities = 179/186 (96%) Strand = Plus / Plus Query: 1 atcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggc 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37 atcacgctcgagacgctcagggacttcgtccacctccgcgcacgcaccaacacgataggc 96 Query: 61 gcgattgctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaat 120 || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 97 gcagttgctcggataaggcaccagcttgcctacgcaacccacagttttttcgatgaaaat 156 Query: 121 ggatttttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgag 180 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 157 ggatttttgtatattcacacccccataataaccaccagcgactgtgagggtgcaggtgag 216 Query: 181 atgttc 186 |||||| Sbjct: 217 atgttc 222
>ref|NM_193854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1680 Score = 119 bits (60), Expect = 3e-24 Identities = 153/184 (83%) Strand = Plus / Plus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcg 61 |||||||||||| ||||||||| ||||||| || ||| | |||||||||||||| || | Sbjct: 410 tcacgctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacgattggtg 469 Query: 62 cgattgctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatg 121 | |||| || || || |||||||| |||| ||||||||||| ||||| ||||| |||| Sbjct: 470 ctgttgcgcgtattagacaccagctagcctgtgcaacacacaggttttttgatgagaatg 529 Query: 122 gatttttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgaga 181 | ||| | ||| | |||||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 530 gttttctttatgtgcacacaccaataataactacaagtgattgtgagggtgctggtgaga 589 Query: 182 tgtt 185 |||| Sbjct: 590 tgtt 593
>dbj|AK101893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070O21, full insert sequence Length = 2115 Score = 111 bits (56), Expect = 8e-22 Identities = 152/184 (82%) Strand = Plus / Plus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcg 61 |||||||||||| ||||||| | ||||||| || ||| | |||||||||||||| || | Sbjct: 562 tcacgctcgagaatctcaggggcgtcgtccatctccgctcccgcaccaacacgattggtg 621 Query: 62 cgattgctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatg 121 | |||| || || || |||||||| |||| ||||||||||| ||||| ||||| |||| Sbjct: 622 ctgttgcgcgtattagacaccagctagcctgtgcaacacacaggttttttgatgagaatg 681 Query: 122 gatttttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgaga 181 | ||| | ||| | |||||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 682 gttttctttatgtgcacacaccaataataactacaagtgattgtgagggtgctggtgaga 741 Query: 182 tgtt 185 |||| Sbjct: 742 tgtt 745
>gb|BT018795.1| Zea mays clone EL01N0528A03.d mRNA sequence Length = 1941 Score = 103 bits (52), Expect = 2e-19 Identities = 151/184 (82%) Strand = Plus / Minus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcg 61 |||||||||||| |||||||||| |||| || || || | |||||||||||||| || | Sbjct: 1452 tcacgctcgagaagctcagggacgtcgttcatctccgttcgcgcaccaacacgattggag 1393 Query: 62 cgattgctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatg 121 || ||||| |||| ||||||||| | ||||| ||| ||||||| || || ||||| |||| Sbjct: 1392 cggttgctaggattaggcaccagttagcctatgcatcacacaggttctttgatgagaatg 1333 Query: 122 gatttttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgaga 181 ||||| | ||| | || ||||| |||||||| || || || ||||| ||||| ||||||| Sbjct: 1332 gatttctctatgtacatacaccaataataactacgagtgactgtgaaggtgctggtgaga 1273 Query: 182 tgtt 185 |||| Sbjct: 1272 tgtt 1269
>gb|AY105512.1| Zea mays PCO123869 mRNA sequence Length = 2025 Score = 103 bits (52), Expect = 2e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacgataggcg 61 |||||||||||| |||||||||| |||| || || || | |||||||||||||| || | Sbjct: 549 tcacgctcgagaagctcagggacgtcgttcatctccgttcgcgcaccaacacgattggag 608 Query: 62 cgattgctcggataaggcaccagcttgcctacgcaacacacagttttttcgatgaaaatg 121 || ||||| |||| ||||||||| | ||||| ||| ||||||| || || ||||| |||| Sbjct: 609 cggttgctaggattaggcaccagttagcctatgcatcacacaggttctttgatgagaatg 668 Query: 122 gatttttgtatatccacacacccataataaccaccagcgattgtgagggtgcaggtgaga 181 ||||| | ||| | || ||||| |||||||| || || || ||||| ||||| ||||||| Sbjct: 669 gatttctctatgtacatacaccaataataactacgagtgactgtgaaggtgctggtgaga 728 Query: 182 tgtt 185 |||| Sbjct: 729 tgtt 732
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 4e-14 Identities = 91/107 (85%) Strand = Plus / Minus Query: 79 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 138 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 15341201 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 15341142 Query: 139 acacccataataaccaccagcgattgtgagggtgcaggtgagatgtt 185 ||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 15341141 acaccaataataactacaagtgattgtgagggtgctggtgagatgtt 15341095 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 54 |||||||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 15342102 tcacgctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 15342050
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 85.7 bits (43), Expect = 4e-14 Identities = 91/107 (85%) Strand = Plus / Minus Query: 79 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 138 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 18742 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 18683 Query: 139 acacccataataaccaccagcgattgtgagggtgcaggtgagatgtt 185 ||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 18682 acaccaataataactacaagtgattgtgagggtgctggtgagatgtt 18636 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 54 |||||||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 19643 tcacgctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 19591
>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1039D07 Length = 135301 Score = 85.7 bits (43), Expect = 4e-14 Identities = 91/107 (85%) Strand = Plus / Minus Query: 79 caccagcttgcctacgcaacacacagttttttcgatgaaaatggatttttgtatatccac 138 |||||||| |||| ||||||||||| ||||| ||||| ||||| ||| | ||| | ||| Sbjct: 82560 caccagctagcctgtgcaacacacaggttttttgatgagaatggttttctttatgtgcac 82501 Query: 139 acacccataataaccaccagcgattgtgagggtgcaggtgagatgtt 185 ||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 82500 acaccaataataactacaagtgattgtgagggtgctggtgagatgtt 82454 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 2 tcacgctcgagacgctcagggacttcgtccacctacgcgcacgcaccaacacg 54 |||||||||||| ||||||||| ||||||| || ||| | |||||||||||| Sbjct: 83461 tcacgctcgagaatctcagggacgtcgtccatctccgctcccgcaccaacacg 83409
>gb|BT014240.1| Lycopersicon esculentum clone 133440F, mRNA sequence Length = 2082 Score = 58.0 bits (29), Expect = 1e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 130 tatatccacacacccataataaccaccagcgattgtgagggtgcaggtgagatgttc 186 ||||||||||| || ||||| || || || |||||||||||||| |||||||||||| Sbjct: 644 tatatccacaccccaataatcacaacaagtgattgtgagggtgctggtgagatgttc 700
>emb|CR318644.8| Zebrafish DNA sequence from clone DKEYP-11H3 in linkage group 23, complete sequence Length = 92984 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 78552 gattgtgagggtgcaggtgagatgt 78528
>emb|BX927365.7| Zebrafish DNA sequence from clone DKEY-161P7 in linkage group 23, complete sequence Length = 229608 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 207731 gattgtgagggtgcaggtgagatgt 207755
>emb|CR855258.6| Zebrafish DNA sequence from clone DKEY-2N12 in linkage group 5, complete sequence Length = 141618 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 106095 gattgtgagggtgcaggtgagatgt 106071
>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete sequence Length = 222405 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 2329 gattgtgagggtgcaggtgagatgt 2353
>emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in linkage group 5, complete sequence Length = 151068 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 80525 gattgtgagggtgcaggtgagatgt 80501
>emb|BX296533.9| Zebrafish DNA sequence from clone DKEY-54O1 in linkage group 5, complete sequence Length = 200047 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 189346 gattgtgagggtgcaggtgagatgt 189322
>emb|CR855328.8| Zebrafish DNA sequence from clone CH211-207D6 in linkage group 2, complete sequence Length = 152638 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||||||||| Sbjct: 144484 gattgtgagggtgcaggtgagatgt 144460
>emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 in linkage group 14, complete sequence Length = 150992 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Plus Query: 161 attgtgagggtgcaggtgagatgt 184 |||||||||||||||||||||||| Sbjct: 87260 attgtgagggtgcaggtgagatgt 87283
>emb|CR407547.14| Zebrafish DNA sequence from clone DKEY-62A12 in linkage group 9, complete sequence Length = 204067 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 8953 gattgtgagggtgcaggtgaga 8932
>emb|BX571794.22| Zebrafish DNA sequence from clone DKEY-246M18 in linkage group 15, complete sequence Length = 177616 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 112936 gattgtgagggtgcaggtgaga 112915
>emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in linkage group 25, complete sequence Length = 199974 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 135122 gattgtgagggtgcaggtgaga 135143
>emb|CR932397.9| Zebrafish DNA sequence from clone CH211-123E19 in linkage group 13, complete sequence Length = 173825 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 118975 gattgtgagggtgcaggtgaga 118996
>emb|BX510332.10| Zebrafish DNA sequence from clone CH211-225M7, complete sequence Length = 171212 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgtt 185 ||||||||||| |||||||||||||| Sbjct: 80060 gattgtgagggcgcaggtgagatgtt 80035
>emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 in linkage group 10, complete sequence Length = 210640 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 22435 gattgtgagggtgcaggtgaga 22414
>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15, complete sequence Length = 155540 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 135392 gattgtgagggtgcaggtgaga 135413
>emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, complete sequence Length = 208227 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 183012 gattgtgagggtgcaggtgaga 183033
>emb|BX323548.11| Zebrafish DNA sequence from clone DKEY-31D5 in linkage group 11, complete sequence Length = 229237 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 183891 gattgtgagggtgcaggtgaga 183912
>emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in linkage group 20, complete sequence Length = 137700 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 62914 gattgtgagggtgcaggtgaga 62935
>emb|AL807818.14| Zebrafish DNA sequence from clone CH211-225H24, complete sequence Length = 194425 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgaga 181 |||||||||||||||||||||| Sbjct: 65982 gattgtgagggtgcaggtgaga 66003
>emb|BX936299.14| Zebrafish DNA sequence from clone CH211-2I17 in linkage group 1, complete sequence Length = 132306 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||| |||||||||| Sbjct: 105897 gattgtgagggtgcgggtgagatgt 105921
>emb|CR628341.13| Zebrafish DNA sequence from clone DKEY-29G22 in linkage group 6, complete sequence Length = 246165 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 146704 gattgtgagggcgcaggtgagatgt 146680
>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11, complete sequence Length = 204337 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||||| ||||| Sbjct: 129996 gattgtgagggtgcaggtgggatgt 130020
>gb|U20864.1| Caenorhabditis elegans cosmid F32A5, complete sequence Length = 38731 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 gttttttcgatgaaaatggattttt 128 ||||| ||||||||||||||||||| Sbjct: 9200 gttttatcgatgaaaatggattttt 9224 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ttttttcgatgaaaatggattttt 128 |||| ||||||||||||||||||| Sbjct: 10100 ttttatcgatgaaaatggattttt 10077
>emb|CR388029.10| Zebrafish DNA sequence from clone CH211-214O13 in linkage group 14, complete sequence Length = 210704 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||||| |||||||| Sbjct: 165768 gattgtgagggtgcagatgagatgt 165792
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||||| |||||||| Sbjct: 94139 gattgtgagggtgcagatgagatgt 94115
>emb|CR381633.6| Zebrafish DNA sequence from clone CH211-230M9 in linkage group 14, complete sequence Length = 163910 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||| ||||||||||||||||||| Sbjct: 128462 gattgcgagggtgcaggtgagatgt 128486
>emb|CR352288.9| Zebrafish DNA sequence from clone CH211-123P18 in linkage group 16, complete sequence Length = 103979 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 attgtgagggtgcaggtgaga 181 ||||||||||||||||||||| Sbjct: 73632 attgtgagggtgcaggtgaga 73652
>emb|CR293530.22| Zebrafish DNA sequence from clone CH211-129C13 in linkage group 1, complete sequence Length = 179015 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 164511 gattgtgagggcgcaggtgagatgt 164487
>emb|BX927355.6| Zebrafish DNA sequence from clone CH211-129L20 in linkage group 1, complete sequence Length = 75717 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||| |||||||||| Sbjct: 26060 gattgtgagggtgcgggtgagatgt 26036
>emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in linkage group 14, complete sequence Length = 187193 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||||||||| |||| Sbjct: 173031 gattgtgagggtgcaggtgaaatgt 173055
>emb|BX629340.6| Zebrafish DNA sequence from clone DKEY-183O11 in linkage group 9, complete sequence Length = 172090 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 15900 gattgtgagggcgcaggtgagatgt 15876
>emb|BX248498.5| Zebrafish DNA sequence from clone CH211-241P24, complete sequence Length = 171348 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||| ||||||||||||||||||| Sbjct: 71738 gattgcgagggtgcaggtgagatgt 71714
>emb|BX649351.10| Zebrafish DNA sequence from clone CH211-168F19 in linkage group 4, complete sequence Length = 144569 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 82512 gattgtgagggcgcaggtgagatgt 82536
>emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 in linkage group 24, complete sequence Length = 161275 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||| |||||||||||||||||||| Sbjct: 93284 gattttgagggtgcaggtgagatgt 93260
>emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, complete sequence Length = 199141 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 23901 gattgtgagggcgcaggtgagatgt 23877
>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence Length = 220527 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 |||||||||||||||||||| |||| Sbjct: 206691 gattgtgagggtgcaggtgaaatgt 206715
>emb|BX936455.9| Zebrafish DNA sequence from clone DKEY-199I12 in linkage group 20, complete sequence Length = 123707 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||||||||| ||||||| Sbjct: 76612 gattgtgagggtgcaggagagatgt 76588
>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20, complete sequence Length = 186675 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 32924 gattgtgagggcgcaggtgagatgt 32900
>emb|CR388007.7| Zebrafish DNA sequence from clone DKEY-22G9 in linkage group 6, complete sequence Length = 221983 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 727 gattgtgagggcgcaggtgagatgt 703
>emb|AL929533.12| Zebrafish DNA sequence from clone DKEY-18E17 in linkage group 5, complete sequence Length = 251370 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 250794 gattgtgagggcgcaggtgagatgt 250770
>emb|BX323826.6| Zebrafish DNA sequence from clone CH211-57H10 in linkage group 5, complete sequence Length = 119262 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 1424 gattgtgagggcgcaggtgagatgt 1400
>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete sequence Length = 190789 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gatgaaaatggatttttgtat 132 ||||||||||||||||||||| Sbjct: 103720 gatgaaaatggatttttgtat 103700
>emb|CR450825.5| Zebrafish DNA sequence from clone DKEY-117B24 in linkage group 11, complete sequence Length = 90653 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgt 184 ||||||||||| ||||||||||||| Sbjct: 14715 gattgtgagggcgcaggtgagatgt 14739
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaatggatttttgtatatc 135 |||||||||||||||||||| Sbjct: 36516 aaaatggatttttgtatatc 36535
>emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 in linkage group 14, complete sequence Length = 81999 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 attgtgagggtgcaggtgagatgt 184 |||||||||| ||||||||||||| Sbjct: 64439 attgtgagggcgcaggtgagatgt 64416
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 2.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 159 cgattgtgagggtgcaggtgagatgttc 186 ||||||||| ||||| |||||||||||| Sbjct: 1428085 cgattgtgaaggtgccggtgagatgttc 1428112
>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence Length = 186714 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtga 179 |||||||||||||||||||| Sbjct: 121608 gattgtgagggtgcaggtga 121627
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaatggatttttgtatatc 135 |||||||||||||||||||| Sbjct: 164109 aaaatggatttttgtatatc 164128
>emb|AL845312.3| Zebrafish DNA sequence from clone DKEY-287F10, complete sequence Length = 174959 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtga 179 |||||||||||||||||||| Sbjct: 113761 gattgtgagggtgcaggtga 113780
>emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in linkage group 4, complete sequence Length = 158108 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 attgtgagggtgcaggtgagatgt 184 |||||||||||||||| ||||||| Sbjct: 89461 attgtgagggtgcaggcgagatgt 89484
>emb|BX072563.7| Zebrafish DNA sequence from clone CH211-277G22 in linkage group 15, complete sequence Length = 170665 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtga 179 |||||||||||||||||||| Sbjct: 19861 gattgtgagggtgcaggtga 19842
>emb|AL935202.7| Zebrafish DNA sequence from clone CH211-197E11, complete sequence Length = 189096 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatg 183 ||||||||||| |||||||||||| Sbjct: 63194 gattgtgagggcgcaggtgagatg 63171
>emb|BX000472.8| Zebrafish DNA sequence from clone DKEY-77H17, complete sequence Length = 172174 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatg 183 ||||||||||| |||||||||||| Sbjct: 137429 gattgtgagggcgcaggtgagatg 137406
>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5, complete sequence Length = 163926 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 attgtgagggtgcaggtgagatgt 184 ||||||||||||||| |||||||| Sbjct: 21935 attgtgagggtgcagatgagatgt 21912
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5, complete sequence Length = 143013 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 attgtgagggtgcaggtgagatgt 184 ||||||||||||||| |||||||| Sbjct: 23172 attgtgagggtgcagatgagatgt 23149
>ref|XM_511818.1| PREDICTED: Pan troglodytes similar to Protein FAM18B (NPD008) (CGI-148) (LOC455050), mRNA Length = 648 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 cacacccataataaccacc 156 ||||||||||||||||||| Sbjct: 489 cacacccataataaccacc 471
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 aacacacagttttttcgat 114 ||||||||||||||||||| Sbjct: 63017 aacacacagttttttcgat 62999
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 aacacacagttttttcgat 114 ||||||||||||||||||| Sbjct: 89010 aacacacagttttttcgat 88992
>ref|NM_207015.1| Homo sapiens N-acetylated alpha-linked acidic dipeptidase-like 2 (NAALADL2), mRNA Length = 4928 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 tttcgatgaaaatggattt 126 ||||||||||||||||||| Sbjct: 4150 tttcgatgaaaatggattt 4132
>gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome 13, complete sequence Length = 151340 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 tttttgtatatccacacac 142 ||||||||||||||||||| Sbjct: 104149 tttttgtatatccacacac 104167
>emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in linkage group 14, complete sequence Length = 262688 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 tgtgagggtgcaggtgaga 181 ||||||||||||||||||| Sbjct: 149597 tgtgagggtgcaggtgaga 149579
>emb|CR719822.2|CNS0GID0 Tetraodon nigroviridis full-length cDNA Length = 1858 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 tgaaaatggatttttgtat 132 ||||||||||||||||||| Sbjct: 1858 tgaaaatggatttttgtat 1840
>ref|XM_760221.1| Theileria parva strain Muguga asparaginyl-tRNA synthetase (TP02_0746) partial mRNA Length = 2370 Score = 38.2 bits (19), Expect = 9.2 Identities = 25/27 (92%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgttc 186 |||||||| |||||||||||| ||||| Sbjct: 1171 gattgtgaaggtgcaggtgagttgttc 1197
>emb|CR559944.12| Zebrafish DNA sequence from clone CH211-10D19 in linkage group 13, complete sequence Length = 180933 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 163 tgtgagggtgcaggtgaga 181 ||||||||||||||||||| Sbjct: 47701 tgtgagggtgcaggtgaga 47719
>ref|XM_503562.1| Yarrowia lipolytica CLIB122, YALI0E04939g predicted mRNA Length = 1422 Score = 38.2 bits (19), Expect = 9.2 Identities = 25/27 (92%) Strand = Plus / Plus Query: 160 gattgtgagggtgcaggtgagatgttc 186 |||||||||||||| |||||| ||||| Sbjct: 538 gattgtgagggtgccggtgaggtgttc 564
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 atccacacacccataataa 151 ||||||||||||||||||| Sbjct: 1420389 atccacacacccataataa 1420371
>emb|AL672088.9| Zebrafish DNA sequence from clone BUSM1-153O2 Contains a novel gene similar to FOG2 (friend of GATA 2) and a CpG island, complete sequence Length = 93475 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 166 gagggtgcaggtgagatgt 184 ||||||||||||||||||| Sbjct: 46702 gagggtgcaggtgagatgt 46720
>emb|BX294122.12| Zebrafish DNA sequence from clone DKEYP-6A12 in linkage group 21, complete sequence Length = 162708 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagat 182 ||||||||||| ||||||||||| Sbjct: 114389 gattgtgagggcgcaggtgagat 114367
>emb|CR859404.1| Pongo pygmaeus mRNA; cDNA DKFZp468J0625 (from clone DKFZp468J0625) Length = 1621 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 cacacccataataaccacc 156 ||||||||||||||||||| Sbjct: 518 cacacccataataaccacc 500
>gb|AC104150.6| Homo sapiens 3q BAC RP11-523G9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160850 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 tttcgatgaaaatggattt 126 ||||||||||||||||||| Sbjct: 116900 tttcgatgaaaatggattt 116918
>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete sequence Length = 173991 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 cacacccataataaccacc 156 ||||||||||||||||||| Sbjct: 164165 cacacccataataaccacc 164147
>gb|AC005838.2| Homo sapiens chromosome 17, clone RP11-385D13, complete sequence Length = 67791 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 138 cacacccataataaccacc 156 ||||||||||||||||||| Sbjct: 50951 cacacccataataaccacc 50933
>emb|BX548046.4| Zebrafish DNA sequence from clone DKEY-176G1 in linkage group 17, complete sequence Length = 168695 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagat 182 ||||||||||| ||||||||||| Sbjct: 154456 gattgtgagggcgcaggtgagat 154434
>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence Length = 151789 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 161 attgtgagggtgcaggtga 179 ||||||||||||||||||| Sbjct: 14666 attgtgagggtgcaggtga 14684
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 aacacacagttttttcgat 114 ||||||||||||||||||| Sbjct: 17333771 aacacacagttttttcgat 17333753
>gb|AY686134.1| Cercocebus torquatus lunulatus isolate wcm_452 cytochrome oxidase subunit II (COII) gene, partial cds; mitochondrial Length = 1183 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 135 ccacacacccataataaccacca 157 ||||| ||||||||||||||||| Sbjct: 873 ccacaaacccataataaccacca 895
>emb|AL590502.12| Human DNA sequence from clone RP11-144G16 on chromosome 10, complete sequence Length = 175583 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 atttttgtatatccacaca 141 ||||||||||||||||||| Sbjct: 92788 atttttgtatatccacaca 92806
>tpe|BN000432.1| TPA: TPA_exp: Homo sapiens mRNA for putative N-acetylated alpha-linked acidic dipeptidase-like protein 2 (NAALADL2 gene), splice variant A Length = 4928 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 tttcgatgaaaatggattt 126 ||||||||||||||||||| Sbjct: 4150 tttcgatgaaaatggattt 4132
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 aacacacagttttttcgat 114 ||||||||||||||||||| Sbjct: 17427945 aacacacagttttttcgat 17427927
>emb|AL832144.1|HSM803451 Homo sapiens mRNA; cDNA DKFZp686E21111 (from clone DKFZp686E21111) Length = 4928 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 tttcgatgaaaatggattt 126 ||||||||||||||||||| Sbjct: 4150 tttcgatgaaaatggattt 4132
>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete sequence Length = 206864 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 124 tttttgtatatccacacac 142 ||||||||||||||||||| Sbjct: 178320 tttttgtatatccacacac 178302
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 38.2 bits (19), Expect = 9.2 Identities = 25/27 (92%) Strand = Plus / Minus Query: 160 gattgtgagggtgcaggtgagatgttc 186 |||||||||||||| |||||| ||||| Sbjct: 549209 gattgtgagggtgccggtgaggtgttc 549183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,311,680 Number of Sequences: 3902068 Number of extensions: 1311680 Number of successful extensions: 99914 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99615 Number of HSP's gapped (non-prelim): 299 length of query: 186 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 164 effective length of database: 17,147,199,772 effective search space: 2812140762608 effective search space used: 2812140762608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)