ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags15c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104874.1| Zea mays PCO128535 mRNA sequence Length = 1001 Score = 442 bits (223), Expect = e-121 Identities = 342/383 (89%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || || || || ||||||||||| ||||| ||||||||| || Sbjct: 246 gatggtgggttgattacaccggttcttcaagatgctgataagcttgacatttattcattg 305 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||| ||| Sbjct: 306 tcaaggaaatggaaggagttggttgataaggcgcgagcaaagcagctgcagccccatgag 365 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 ||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||||| Sbjct: 366 tacaactctggcacctttactctttcgaatcttggtatgtttggagttgataggttcgat 425 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || |||||||||||||||| ||||||||||| || ||||||||| ||||||||||| Sbjct: 426 gcaatactgccacctggaactggcgcaatcatggccgtcggtgcatcagaaccgacagtt 485 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| ||| Sbjct: 486 gttggtacaaaagacggtagaatcgggatcaagagccaaatgcaggtaaatgttaccgct 545 Query: 304 gatcatcgtgttatttatggatctgatcttgccgcctttctgcaaactctgtccaagata 363 |||||||| |||||||||||| |||| |||||||| ||||||||||| || | |||||| Sbjct: 546 gatcatcgggttatttatggagctgaccttgccgcttttctgcaaacacttgctaagata 605 Query: 364 attgaggatcccaaggaccttac 386 ||||||||||||||||| ||||| Sbjct: 606 attgaggatcccaaggatcttac 628
>dbj|AK099737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090I09, full insert sequence Length = 1831 Score = 434 bits (219), Expect = e-118 Identities = 350/395 (88%) Strand = Plus / Plus Query: 1 atcgatggtggattgataacccccgtgctccaggatgctgataancttgatatttattca 60 ||||||||||| ||||| || || ||||| | ||||||||||| || || |||||||| Sbjct: 1125 atcgatggtgggttgattacgccagtgcttcctgatgctgataagctcgacatttattct 1184 Query: 61 ctgtcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccan 120 |||| ||||||||||||||| | || ||||||||||| || |||||||| |||||||| Sbjct: 1185 ttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagctacagccccat 1244 Query: 121 gagtacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattc 180 || ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 1245 gaatacaattctggcacctttactatttcaaaccttggtatgtttggagttgacagattt 1304 Query: 181 gatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgaca 240 ||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| Sbjct: 1305 gatgcaatcttgccacctggaactggtgcaatcatggccgttggatcatcacaaccaaca 1364 Query: 241 gttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttact 300 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1365 cttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtcaatgttact 1424 Query: 301 gctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaactctgtccaag 360 ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||||| Sbjct: 1425 gctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaactctttccaag 1484 Query: 361 ataattgaggatcccaaggaccttacgttctagac 395 |||||||||||||||||||||||||| || ||||| Sbjct: 1485 ataattgaggatcccaaggaccttacattttagac 1519
>dbj|AK069414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018G17, full insert sequence Length = 890 Score = 434 bits (219), Expect = e-118 Identities = 350/395 (88%) Strand = Plus / Plus Query: 1 atcgatggtggattgataacccccgtgctccaggatgctgataancttgatatttattca 60 ||||||||||| ||||| || || ||||| | ||||||||||| || || |||||||| Sbjct: 189 atcgatggtgggttgattacgccagtgcttcctgatgctgataagctcgacatttattct 248 Query: 61 ctgtcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccan 120 |||| ||||||||||||||| | || ||||||||||| || |||||||| |||||||| Sbjct: 249 ttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagctacagccccat 308 Query: 121 gagtacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattc 180 || ||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| ||||| Sbjct: 309 gaatacaattctggcacctttactatttcaaaccttggtatgtttggagttgacagattt 368 Query: 181 gatgcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgaca 240 ||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| Sbjct: 369 gatgcaatcttgccacctggaactggtgcaatcatggccgttggatcatcacaaccaaca 428 Query: 241 gttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttact 300 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 429 cttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtcaatgttact 488 Query: 301 gctgatcatcgtgttatttatggatctgatcttgccgcctttctgcaaactctgtccaag 360 ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||||| Sbjct: 489 gctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaactctttccaag 548 Query: 361 ataattgaggatcccaaggaccttacgttctagac 395 |||||||||||||||||||||||||| || ||||| Sbjct: 549 ataattgaggatcccaaggaccttacattttagac 583
>gb|BT024020.1| Zea mays clone EL01N0555A06 mRNA sequence Length = 1898 Score = 375 bits (189), Expect = e-101 Identities = 365/425 (85%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || || || || ||||||||||| ||||| ||||||||| || Sbjct: 1158 gatggtgggttgattacaccagttcttcaagatgctgataagcttgacatttattcattg 1217 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 |||||||||||||| ||| | ||||||||||| || ||||||||| |||||||||| ||| Sbjct: 1218 tcaaggaaatggaaagagttagttgataaggcgcgagcaaagcagttgcagccccatgag 1277 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 ||||||||||| || || ||||| || || ||||||||||| ||||||||||| || ||| Sbjct: 1278 tacaactctggcacgtttactctctcgaatcttggtatgtttggagttgataggtttgat 1337 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || |||||||||||||||||||||||||||| || || |||||| |||| || || Sbjct: 1338 gcaatactgccacctggaactggagcaatcatggccgtcggggcatcagaacccaccatt 1397 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 1398 gttggtacaaaagatggtagaattgggatcaagaatcaaatgcaggtaaatgttaccgcc 1457 Query: 304 gatcatcgtgttatttatggatctgatcttgccgcctttctgcaaactctgtccaagata 363 |||||||| |||||||||||| |||| ||||| || ||||||||||| || |||||||| Sbjct: 1458 gatcatcgggttatttatggagctgaccttgctgcttttctgcaaacacttgccaagata 1517 Query: 364 attgaggatcccaaggaccttacgttctagacgtaccaagtgattctttttccccgagac 423 ||||||||||||||||| ||||| |||| | || |||| ||||| |||||||| ||| | Sbjct: 1518 attgaggatcccaaggatcttacattctgaatgtcccaactgattgtttttccctgaggc 1577 Query: 424 aatca 428 ||||| Sbjct: 1578 aatca 1582
>gb|U16254.1|ZMU16254 Zea mays dihydrolipoamide acetyl transferase (ZM/DHLAAT) mRNA, complete cds Length = 564 Score = 341 bits (172), Expect = 1e-90 Identities = 295/335 (88%), Gaps = 3/335 (0%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || || || || ||||||||||| ||||| ||||||||| || Sbjct: 115 gatggtgggttgattacaccggttcttcaagatgctgataagcttgacatttattcattg 174 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagcccc-anga 122 |||||||||||||||||| ||||||||||||| || ||||||||||||||||||| | || Sbjct: 175 tcaaggaaatggaaggagttggttgataaggcgcgagcaaagcagctgcagcccccatga 234 Query: 123 gtacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcga 182 |||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || || Sbjct: 235 gtacaactctggcacctttactctttcgaatcttggtatgtttggagttgataggtttga 294 Query: 183 tgcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagt 242 ||| || |||||||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct: 295 tgcaatactgccacctggaactggcgcaatcatggccgtcggtgcatcagaaccgacagt 354 Query: 243 tgttggtacaaaagatggtagaattggg--atcaagtgccaaatgcaggtcaatgttact 300 ||||||||||||||| ||||| | | || |||||| ||||||||||||| |||||||| Sbjct: 355 tgttggtacaaaagacggtaggaatcggacatcaagagccaaatgcaggtaaatgttacc 414 Query: 301 gctgatcatcgtgttatttatggatctgatcttgc 335 |||||||||||||||||||||||| |||| ||||| Sbjct: 415 gctgatcatcgtgttatttatggagctgaccttgc 449
>gb|AY108924.1| Zea mays PCO128534 mRNA sequence Length = 614 Score = 268 bits (135), Expect = 2e-68 Identities = 313/370 (84%), Gaps = 3/370 (0%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || || || || ||||||||||| ||||| ||||||||| || Sbjct: 236 gatggtgggttgattacaccagttcttcaagatgctgataagcttgacatttattcattg 295 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 |||||||||||||| ||| | ||||||||||| || ||||||||| |||||||||| ||| Sbjct: 296 tcaaggaaatggaaagagttagttgataaggcgcgagcaaagcagttgcagccccatgag 355 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 ||||||||||| || || ||||| || || ||||||||||| ||||||||||| || || Sbjct: 356 tacaactctggcacgtttactctctcgaatcttggtatgtttggagttgataggtttgac 415 Query: 184 gcgatcttgccacctggaact-ggagcaatcatggctgt-tggtgcatcacaaccgacag 241 || || |||||||||||||| |||||||||||||| || || |||||| |||| || Sbjct: 416 gcaatactgccacctggaactgggagcaatcatggccgtcgggggcatcagaacccacca 475 Query: 242 ttgttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactg 301 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 476 ttgttggtacaaaagatggtagaattgggatcaagaatcaaatgcaggtaaatgttaccg 535 Query: 302 ctgat-catcgtgttatttatggatctgatcttgccgcctttctgcaaactctgtccaag 360 | ||| || | | |||||||||| |||| ||||| || ||||||||||| || ||||| Sbjct: 536 ccgatccacggggntatttatggagctgaccttgctgcttttctgcaaacacttgccaag 595 Query: 361 ataattgagg 370 |||||||||| Sbjct: 596 ataattgagg 605
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 287 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 346 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 4171419 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 4171360 Query: 347 aaactctgtccaagataattgaggatcccaaggaccttacgttctagac 395 ||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 4171359 aaactctttccaagataattgaggatcccaaggaccttacattttagac 4171311 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 208 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 267 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 4171594 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 4171535 Query: 268 gggatcaagtgccaaatgcaggt 290 ||||||||| |||||||||||| Sbjct: 4171534 gggatcaagaaccaaatgcaggt 4171512 Score = 93.7 bits (47), Expect = 5e-16 Identities = 64/70 (91%) Strand = Plus / Minus Query: 136 accttcactctttcaaaccttggtatgttnggagttgatagattcgatgcgatcttgcca 195 ||||| ||| ||||||||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 4171756 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 4171697 Query: 196 cctggaactg 205 |||||||||| Sbjct: 4171696 cctggaactg 4171687 Score = 79.8 bits (40), Expect = 8e-12 Identities = 74/86 (86%) Strand = Plus / Minus Query: 52 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctg 111 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 4174563 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 4174504 Query: 112 cagccccangagtacaactctggtac 137 |||||||| || ||||| |||||||| Sbjct: 4174503 cagccccatgaatacaattctggtac 4174478
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 287 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 346 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 4171406 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 4171347 Query: 347 aaactctgtccaagataattgaggatcccaaggaccttacgttctagac 395 ||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 4171346 aaactctttccaagataattgaggatcccaaggaccttacattttagac 4171298 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 208 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 267 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 4171581 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 4171522 Query: 268 gggatcaagtgccaaatgcaggt 290 ||||||||| |||||||||||| Sbjct: 4171521 gggatcaagaaccaaatgcaggt 4171499 Score = 93.7 bits (47), Expect = 5e-16 Identities = 64/70 (91%) Strand = Plus / Minus Query: 136 accttcactctttcaaaccttggtatgttnggagttgatagattcgatgcgatcttgcca 195 ||||| ||| ||||||||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 4171743 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 4171684 Query: 196 cctggaactg 205 |||||||||| Sbjct: 4171683 cctggaactg 4171674 Score = 79.8 bits (40), Expect = 8e-12 Identities = 74/86 (86%) Strand = Plus / Minus Query: 52 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctg 111 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 4174550 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 4174491 Query: 112 cagccccangagtacaactctggtac 137 |||||||| || ||||| |||||||| Sbjct: 4174490 cagccccatgaatacaattctggtac 4174465
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 161 bits (81), Expect = 3e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 287 aggtcaatgttactgctgatcatcgtgttatttatggatctgatcttgccgcctttctgc 346 ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 113815 aggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgc 113756 Query: 347 aaactctgtccaagataattgaggatcccaaggaccttacgttctagac 395 ||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 113755 aaactctttccaagataattgaggatcccaaggaccttacattttagac 113707 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 208 gcaatcatggctgttggtgcatcacaaccgacagttgttggtacaaaagatggtagaatt 267 ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||| Sbjct: 113990 gcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtatt 113931 Query: 268 gggatcaagtgccaaatgcaggt 290 ||||||||| |||||||||||| Sbjct: 113930 gggatcaagaaccaaatgcaggt 113908 Score = 93.7 bits (47), Expect = 5e-16 Identities = 64/70 (91%) Strand = Plus / Minus Query: 136 accttcactctttcaaaccttggtatgttnggagttgatagattcgatgcgatcttgcca 195 ||||| ||| ||||||||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 114152 acctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgcca 114093 Query: 196 cctggaactg 205 |||||||||| Sbjct: 114092 cctggaactg 114083 Score = 79.8 bits (40), Expect = 8e-12 Identities = 74/86 (86%) Strand = Plus / Minus Query: 52 atttattcactgtcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctg 111 |||||||| |||| ||||||||||||||| | || ||||||||||| || |||||||| Sbjct: 116959 atttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagcta 116900 Query: 112 cagccccangagtacaactctggtac 137 |||||||| || ||||| |||||||| Sbjct: 116899 cagccccatgaatacaattctggtac 116874
>ref|NM_103166.2| Arabidopsis thaliana EMB3003; acyltransferase/ dihydrolipoyllysine-residue acetyltransferase/ protein binding AT1G34430 (EMB3003) mRNA, complete cds Length = 1731 Score = 135 bits (68), Expect = 2e-28 Identities = 265/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || ||||| ||| | |||||||| |||| |||||||| | Sbjct: 1067 gatggtggtttgatcactccggtgcttcagaacgctgataaggttgacatttattcgtta 1126 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1127 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1186 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||||||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1187 tacaacactggtaccttcactctctctaacctaggaatgtttggcgttgatcggtttgat 1246 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1247 gctattctaccccctggaacaggagcgattatggctgtcggagcatctcaaccttcagtg 1306 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1307 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1366 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1367 gatcatcgtgtcatctatggtgctgatcttgc 1398
>gb|BT001042.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds Length = 1398 Score = 135 bits (68), Expect = 2e-28 Identities = 265/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || ||||| ||| | |||||||| |||| |||||||| | Sbjct: 1009 gatggtggtttgatcactccggtgcttcagaacgctgataaggttgacatttattcgtta 1068 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1069 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1128 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||||||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1129 tacaacactggtaccttcactctctctaacctaggaatgtttggcgttgatcggtttgat 1188 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1189 gctattctaccccctggaacaggagcgattatggctgtcggagcatctcaaccttcagtg 1248 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1249 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1308 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1309 gatcatcgtgtcatctatggtgctgatcttgc 1340
>gb|AY128294.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds Length = 1645 Score = 135 bits (68), Expect = 2e-28 Identities = 265/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || ||||| ||| | |||||||| |||| |||||||| | Sbjct: 1067 gatggtggtttgatcactccggtgcttcagaacgctgataaggttgacatttattcgtta 1126 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1127 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1186 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||||||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1187 tacaacactggtaccttcactctctctaacctaggaatgtttggcgttgatcggtttgat 1246 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1247 gctattctaccccctggaacaggagcgattatggctgtcggagcatctcaaccttcagtg 1306 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1307 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1366 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1367 gatcatcgtgtcatctatggtgctgatcttgc 1398
>gb|AY084265.1| Arabidopsis thaliana clone 101686 mRNA, complete sequence Length = 1702 Score = 135 bits (68), Expect = 2e-28 Identities = 265/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||||| || ||||| ||| | |||||||| |||| |||||||| | Sbjct: 1032 gatggtggtctgataactcctgtgcttcagaacgctgataaggttgacatttattcgtta 1091 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1092 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1151 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||||||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1152 tacaacactggtaccttcactctctctaacctaggaatgtttggcgttgatcggtttgat 1211 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1212 gctattctaccccctggaacaggagcgattatggctgtaggagcatctcaaccttcagtg 1271 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1272 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1331 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1332 gatcatcgtgtcatctatggtgctgatcttgc 1363
>emb|BX815718.1|CNS0ACXH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1600 Score = 127 bits (64), Expect = 4e-26 Identities = 264/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || ||||| ||| | |||||||| |||| | |||||| | Sbjct: 1116 gatggtggtttgatcactccggtgcttcagaacgctgataaggttgacacttattcgtta 1175 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1176 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1235 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||||||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1236 tacaacactggtaccttcactctctctaacctaggaatgtttggcgttgatcggtttgat 1295 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1296 gctattctaccccctggaacaggagcgattatggctgtcggagcatctcaaccttcagtg 1355 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1356 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1415 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1416 gatcatcgtgtcatctatggtgctgatcttgc 1447
>emb|BX816473.1|CNS0AD0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1564 Score = 127 bits (64), Expect = 4e-26 Identities = 264/332 (79%) Strand = Plus / Plus Query: 4 gatggtggattgataacccccgtgctccaggatgctgataancttgatatttattcactg 63 |||||||| ||||| || || ||||| ||| | |||||||| |||| |||||||| | Sbjct: 1022 gatggtggtttgatcactccggtgcttcagaacgctgataaggttgacatttattcgtta 1081 Query: 64 tcaaggaaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangag 123 || || |||||||| || |||||||||||||||| || |||||||||||||| || ||| Sbjct: 1082 tctagaaaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggag 1141 Query: 124 tacaactctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgat 183 |||||| |||||||||| ||||| || ||||| || ||||| || |||||| | || ||| Sbjct: 1142 tacaacactggtaccttaactctctctaacctaggaatgtttggcgttgatcggtttgat 1201 Query: 184 gcgatcttgccacctggaactggagcaatcatggctgttggtgcatcacaaccgacagtt 243 || || | || |||||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 1202 gctattctaccccctggaacaggagcgattatggctgtcggagcatctcaaccttcagtg 1261 Query: 244 gttggtacaaaagatggtagaattgggatcaagtgccaaatgcaggtcaatgttactgct 303 |||| || ||||| || | ||||| || || ||| |||||||| ||||| || || Sbjct: 1262 gttgcaactaaagacggccgcattggcatgaaaaaccagatgcaggtgaatgtgacggca 1321 Query: 304 gatcatcgtgttatttatggatctgatcttgc 335 ||||||||||| || ||||| |||||||||| Sbjct: 1322 gatcatcgtgtcatctatggtgctgatcttgc 1353
>emb|BX815624.1|CNS0ACU2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 99.6 bits (50), Expect = 8e-18 Identities = 137/167 (82%) Strand = Plus / Plus Query: 70 aaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangagtacaac 129 |||||||| || |||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 1144 aaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggagtacaac 1203 Query: 130 tctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgatgcgatc 189 |||||||||||||||| || ||||| || || || || |||||| | | ||||| || Sbjct: 1204 actggtaccttcactctctctaacctaggaatctttggcgttgatcggtctgatgctatt 1263 Query: 190 ttgccacctggaactggagcaatcatggctgttggtgcatcacaacc 236 | || |||||||| ||||| || |||||||| || ||||| ||||| Sbjct: 1264 ctaccccctggaacaggagcgattatggctgtcggagcatctcaacc 1310
>gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence Length = 82214 Score = 73.8 bits (37), Expect = 5e-10 Identities = 59/67 (88%) Strand = Plus / Plus Query: 70 aaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangagtacaac 129 |||||||| || |||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 20505 aaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggagtacaac 20564 Query: 130 tctggta 136 |||||| Sbjct: 20565 actggta 20571
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 73.8 bits (37), Expect = 5e-10 Identities = 59/67 (88%) Strand = Plus / Plus Query: 70 aaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangagtacaac 129 |||||||| || |||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 105224 aaatggaaagaattggttgataaggctcgagccaagcagctgcagcctcaggagtacaac 105283 Query: 130 tctggta 136 |||||| Sbjct: 105284 actggta 105290
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 52.0 bits (26), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 151 aaccttggtatgttnggagttgatagatt 179 |||||||||||||| |||||||||||||| Sbjct: 380688 aaccttggtatgtttggagttgatagatt 380716
>gb|DQ366726.1| Uncultured Prochlorococcus marinus clone HF10-88F10 genomic sequence Length = 32924 Score = 50.1 bits (25), Expect = 0.007 Identities = 39/44 (88%) Strand = Plus / Minus Query: 136 accttcactctttcaaaccttggtatgttnggagttgatagatt 179 ||||||||| | || |||||||| ||||| |||||||||||||| Sbjct: 20389 accttcactttatctaaccttgggatgtttggagttgatagatt 20346
>ref|XM_482526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1755 Score = 46.1 bits (23), Expect = 0.11 Identities = 92/116 (79%) Strand = Plus / Plus Query: 70 aaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangagtacaac 129 ||||||||||| || || | || ||||| ||||| ||||| || || | ||||||| | Sbjct: 1194 aaatggaaggaactagtcaagaaagctcgtgcaaaacagctccaaccaaatgagtacagc 1253 Query: 130 tctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgatgc 185 ||||| || || || || |||||| | |||||||| || ||||||||||| ||||| Sbjct: 1254 tctgggacatttacactgtcaaacttgggtatgtttggtgttgatagatttgatgc 1309
>dbj|AK070015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040H11, full insert sequence Length = 1754 Score = 46.1 bits (23), Expect = 0.11 Identities = 92/116 (79%) Strand = Plus / Plus Query: 70 aaatggaaggagctggttgataaggctcgngcaaagcagctgcagccccangagtacaac 129 ||||||||||| || || | || ||||| ||||| ||||| || || | ||||||| | Sbjct: 1193 aaatggaaggaactagtcaagaaagctcgtgcaaaacagctccaaccaaatgagtacagc 1252 Query: 130 tctggtaccttcactctttcaaaccttggtatgttnggagttgatagattcgatgc 185 ||||| || || || || |||||| | |||||||| || ||||||||||| ||||| Sbjct: 1253 tctgggacatttacactgtcaaacttgggtatgtttggtgttgatagatttgatgc 1308
>gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196286 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 196 cctggaactggagcaatcatggctgt 221 |||||||||||||| ||||||||||| Sbjct: 167910 cctggaactggagctatcatggctgt 167935
>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174480 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 196 cctggaactggagcaatcatggctgt 221 |||||||||||||| ||||||||||| Sbjct: 109320 cctggaactggagctatcatggctgt 109295
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 taggatgcttgtcagtagatg 451 ||||||||||||||||||||| Sbjct: 71945 taggatgcttgtcagtagatg 71965
>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16, complete sequence Length = 252671 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 accgacagttgttggtacaaa 254 ||||||||||||||||||||| Sbjct: 169756 accgacagttgttggtacaaa 169776
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 taggatgcttgtcagtagatg 451 ||||||||||||||||||||| Sbjct: 22380871 taggatgcttgtcagtagatg 22380851
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 157 ggtatgttnggagttgatagattcgatgcgatcttgccacctgg 200 |||||||| || || |||||||||||||| ||| | |||||||| Sbjct: 14401191 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 14401148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 caggtcaatgttactgctga 305 |||||||||||||||||||| Sbjct: 14400400 caggtcaatgttactgctga 14400381
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 42.1 bits (21), Expect = 1.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 157 ggtatgttnggagttgatagattcgatgcgatcttgccacctgg 200 |||||||| || || |||||||||||||| ||| | |||||||| Sbjct: 92994 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 92951 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 caggtcaatgttactgctga 305 |||||||||||||||||||| Sbjct: 92203 caggtcaatgttactgctga 92184
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 42.1 bits (21), Expect = 1.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 157 ggtatgttnggagttgatagattcgatgcgatcttgccacctgg 200 |||||||| || || |||||||||||||| ||| | |||||||| Sbjct: 756 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 713
>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full insert sequence Length = 1752 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 aaatgcaggtcaatgttactgctga 305 |||||| |||||||||||||||||| Sbjct: 1461 aaatgctggtcaatgttactgctga 1485 Score = 42.1 bits (21), Expect = 1.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 157 ggtatgttnggagttgatagattcgatgcgatcttgccacctgg 200 |||||||| || || |||||||||||||| ||| | |||||||| Sbjct: 1337 ggtatgtttggtgtggatagattcgatgcaatccttccacctgg 1380
>gb|AY111087.1| Zea mays CL10585_1 mRNA sequence Length = 891 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 272 tcaagtgccaaatgcaggtcaatgttactgctgatca 308 ||||| || |||||| ||||||||| ||||||||||| Sbjct: 368 tcaagagcaaaatgctggtcaatgtcactgctgatca 332
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tcaaggaaatggaaggagctg 84 ||||||||||||||||||||| Sbjct: 37083 tcaaggaaatggaaggagctg 37103
>dbj|AP001978.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-258O13, complete sequence Length = 161602 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tcaaggaaatggaaggagctg 84 ||||||||||||||||||||| Sbjct: 141388 tcaaggaaatggaaggagctg 141408
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 taggatgcttgtcagtagatg 451 ||||||||||||||||||||| Sbjct: 22690782 taggatgcttgtcagtagatg 22690762
>gb|AY810465.1| Schistosoma japonicum SJCHGC06930 protein mRNA, partial cds Length = 621 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gttgttggtacaaaagatgg 260 |||||||||||||||||||| Sbjct: 37 gttgttggtacaaaagatgg 56
>gb|AY570737.1| Schistosoma japonicum egg protein CP1084 (CP1084) mRNA, complete cds Length = 1027 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gttgttggtacaaaagatgg 260 |||||||||||||||||||| Sbjct: 427 gttgttggtacaaaagatgg 446
>gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly factor) (MNAT1) gene, complete cds Length = 237446 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 aaaagatggtagaattggga 271 |||||||||||||||||||| Sbjct: 66346 aaaagatggtagaattggga 66365
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 attgggatcaagtgccaaat 284 |||||||||||||||||||| Sbjct: 32551 attgggatcaagtgccaaat 32570
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 acagttgttggtacaaaaga 257 |||||||||||||||||||| Sbjct: 8018078 acagttgttggtacaaaaga 8018097
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 acagttgttggtacaaaaga 257 |||||||||||||||||||| Sbjct: 125596 acagttgttggtacaaaaga 125615
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 acagttgttggtacaaaaga 257 |||||||||||||||||||| Sbjct: 41847 acagttgttggtacaaaaga 41866
>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144000 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gacagttgttggtacaaaag 256 |||||||||||||||||||| Sbjct: 32667 gacagttgttggtacaaaag 32648
>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191464 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aaaagatggtagaattggga 271 |||||||||||||||||||| Sbjct: 62020 aaaagatggtagaattggga 62001 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,126,778 Number of Sequences: 3902068 Number of extensions: 4126778 Number of successful extensions: 71097 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70891 Number of HSP's gapped (non-prelim): 201 length of query: 496 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 474 effective length of database: 17,147,199,772 effective search space: 8127772691928 effective search space used: 8127772691928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
