>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score =  157 bits (396), Expect = 3e-38
 Identities = 77/161 (47%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
 Frame = +1

Query: 16   RRLLNFIYPSLYRLDEVL---TVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWL 186
            ++LL  +YP+L+R+DE L   +   D     L+RLPL  + LD+ GLY+ DDGF  ++W 
Sbjct: 880  KKLLKLLYPNLFRVDEWLLKPSAAHDDFKDVLRRLPLAAESLDSRGLYIYDDGFRLVLWF 939

Query: 187  GRMLQPELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVV 366
            GRML P++  ++LGV  +   DLS++  +E +N  S+  M + + LRE D S + +  +V
Sbjct: 940  GRMLSPDIAKNLLGVDFA--ADLSRVTFQEQENGMSKKLMRLVKKLRESDPSYHPMCFLV 997

Query: 367  RQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIHRQTQSS 489
            RQGEQPREGFLLL NL+EDQM G+S Y+DWILQ+HRQ Q +
Sbjct: 998  RQGEQPREGFLLLRNLIEDQMGGSSGYVDWILQLHRQVQQN 1038

>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 37/126 (29%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
 Frame = +1

Query: 109  LPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQPELMNDILGV-SLSNFPDLSKIQLRECDN 285
            +PL  + L   G+Y L++G   L+++G  +  +++  +  V S +  P  S+  L++ DN
Sbjct: 972  IPLQSEHLSDEGVYFLENGEDGLIYIGESVNSDILQKLFNVRSAAELP--SQYVLQKYDN 1029

Query: 286  NHSRNFMAVQRALRERDSSCYQLPRVVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQ 465
              S+ F  V   +R + SS  ++ ++ ++G+ P    L  S +VED+ +G +SY+D+++ 
Sbjct: 1030 QLSKKFNDVVNEIRRQRSSYLRI-KLCKKGD-PAGNMLFQSYMVEDRGSGGASYVDFLVS 1087

Query: 466  IHRQTQ 483
            +HRQ Q
Sbjct: 1088 VHRQIQ 1093

>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II|
          Length = 891

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
 Frame = +1

Query: 16   RRLLNFIYPSLYRLDEVLTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLV----- 180
            + L+  +YP++Y L ++   +      +   LP+ +     A    ++DG  FL+     
Sbjct: 723  QELMLNLYPNIYALHQLQPTDCLPDPENTGCLPINMPLCVRASRKFIEDGGAFLIVTGQK 782

Query: 181  ---WLGRMLQPELMNDILGV-SLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCY 348
               W  +   P L+ D+LGV SL +   L  ++L   D   S     +  +LR +  S  
Sbjct: 783  SYLWFHQRTSPLLLQDLLGVESLEDIDSLKALELPTLDTVLSVQVRNLLSSLRMQFPSMA 842

Query: 349  QLPRVVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIH 471
              P++VRQG    EG  + S LVED       Y+D++ +IH
Sbjct: 843  LHPQIVRQGLDGSEG-EIFSTLVEDNTREGFGYLDFLTKIH 882

>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)|
          Length = 1090

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
 Frame = +1

Query: 37   YPSLYRLDEV-----LTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQ 201
            +PSLYR+D +     L +  DR       L L+++ L   G +L+D G   ++W+GR   
Sbjct: 940  HPSLYRVDNLSDEGALNIN-DRTIPQPPILQLSVEKLSRDGAFLMDAGSLLMLWVGRNCS 998

Query: 202  PELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQGEQ 381
               ++ +LGV        +   L E D   S    A    LRE+    + +  V+R+   
Sbjct: 999  QNFLSQVLGVQNYASIPQTMTDLPELDTPESARIAAFISWLREQ-RPFFPVLYVIREESL 1057

Query: 382  PREGFLLLSNLVEDQMAGTSSYMDWILQIHRQ 477
             +  F  L +LVED+     SY +++L I +Q
Sbjct: 1058 MKAAF--LQSLVEDRTESALSYYEFLLHIQQQ 1087

>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)|
            (Fragment)
          Length = 1078

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
 Frame = +1

Query: 37   YPSLYRLDEV-----LTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQ 201
            +PSLYR+D +     L +  DR       L L+++ L   G +L+D G   ++W+G+   
Sbjct: 928  HPSLYRVDNLSDEGALNIS-DRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCT 986

Query: 202  PELMNDILGVSLSNFPDLSK--IQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQG 375
               ++ +LGV   N+  + +    L E D   S   +A    LRE+    + +  V+R  
Sbjct: 987  QNFLSQVLGV--QNYASIPQPMTDLPELDTPESARIIAFISWLREQ-RPFFPILYVIRDE 1043

Query: 376  EQPREGFLLLSNLVEDQMAGTSSYMDWILQIHRQ 477
               +  F  L N++ED+     SY +++L I +Q
Sbjct: 1044 SPMKANF--LQNMIEDRTESALSYYEFLLHIQQQ 1075

>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)|
          Length = 1032

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
 Frame = +1

Query: 31   FIYPSLYRLDEVLTVEPDRIDGSLKRLPLTLQC----LDTAGLYLLDDGFTFLVWLGRML 198
            F YP L  +          +D     LP  ++C    L   G++LL +G    +WLG   
Sbjct: 884  FFYPQLLPIHT--------LDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSS 935

Query: 199  QPELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQGE 378
             PEL+  I  V      +     L E  N +S+    +   ++++     +L  +V+Q E
Sbjct: 936  PPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKL-TIVKQRE 994

Query: 379  QPREGFLLLSNLVEDQ-MAGTSSYMDWILQIHRQ 477
            QP   F     LVED+ + G SSY+D++  +H++
Sbjct: 995  QPEMVFRQF--LVEDKGLYGGSSYVDFLCCVHKE 1026

>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I|
          Length = 926

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
 Frame = +1

Query: 22   LLNFIYPSLYRLDEVLTVEPDRIDGSLKRLP----LTLQCLDTAGLYLLDDGFTFLVWLG 189
            L+ +IYP+LY L + + +E   +      LP    LT   L + GLYL+D      +++G
Sbjct: 767  LMRYIYPTLYSLHD-MPIEAGTVTEQGVVLPSALNLTSALLQSFGLYLVDTHIHQFLYIG 825

Query: 190  RMLQPELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPR--V 363
            +   P+L+ D  GV+        +  +   DN  +    A+   LR  D     +P   +
Sbjct: 826  KDAVPQLLIDAFGVNSLADLKAGRFTMPVIDNPLNVRINAILGKLRSLDKGSTIMPSLYL 885

Query: 364  VRQGEQPREGFLLLSNLVEDQMAGTSSYMDWI 459
            VR    P+      S+ VED+   + SY+ ++
Sbjct: 886  VRGDGDPQLRSWFFSHFVEDRSENSPSYLQFL 917

>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)|
          Length = 1268

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
 Frame = +1

Query: 22   LLNFIYPSLYRLDEVLTVEP-----DRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWL 186
            L+  I+P+LYR+D  LT E      DRI        L+ + L   G +L+D G  F +W+
Sbjct: 1113 LMKMIHPNLYRIDR-LTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWV 1171

Query: 187  GRMLQPELMNDILGVSLSNFPDLSK--IQLRECDNNHSRNFMAVQRALRERDSSCYQLPR 360
            G+      + D+LG   +NF  + +    L E D   S    +    LR+       +  
Sbjct: 1172 GKGCDNNFIEDVLG--YTNFASIPQKMTHLPELDTLSSERARSFITWLRD-SRPLSPILH 1228

Query: 361  VVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIHRQ 477
            +V+     +  F    +L+ED+     SY +++L + +Q
Sbjct: 1229 IVKDESPAKAEF--FQHLIEDRTEAAFSYYEFLLHVQQQ 1265

>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
 Frame = +1

Query: 31   FIYPSLYRLDEV---LTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQ 201
            F YP L  L +     T EP  +  S +RL           +YLL++G    +W+G  +Q
Sbjct: 946  FFYPRLLPLTKSPVESTTEPPAVRASEERL-------SNGDIYLLENGLNLFLWVGASVQ 998

Query: 202  PELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQGEQ 381
              ++  +  VS  +        L   DN  S+    +  +LR + S  Y    VV+Q  +
Sbjct: 999  QGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSR-YMKLTVVKQ--E 1055

Query: 382  PREGFLLLSNLVEDQ-MAGTSSYMDWILQIHRQ 477
             +   L    LVED+ ++G +SY+D++  +H++
Sbjct: 1056 DKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKE 1088

>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)|
          Length = 876

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
 Frame = +1

Query: 22   LLNFIYPSLYRL----DEV-------LTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGF 168
            L+  IYP++Y L    DEV        TV P+ I+        T+   +  GLYL+D+  
Sbjct: 704  LIKSIYPTVYSLHDMPDEVGLPDFEGKTVLPEPINA-------TISLFERYGLYLIDNSA 756

Query: 169  TFLVWLGRMLQPELMNDILGV-SLSNFP-DLSKIQLRECDNNHSRNFMAVQRALRERDSS 342
               +W+G    PEL+ D+    ++S  P   S++ L      + R    + R     D+ 
Sbjct: 757  ELFLWVGGDAVPELLIDVFNTDTISQIPVGKSELPLLNDSPFNERLRRIIGRIRENNDTI 816

Query: 343  CYQLPRVVR------------QGEQPREGFLLLSNLVEDQMAGTSSYMDWI 459
             +Q   ++R            + +       +LS LVED++   +SY +++
Sbjct: 817  TFQSLYIIRGPSINEPANLNSEKDMASLRLWVLSTLVEDKVLNCASYREYL 867

>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear morphology|
            1)
          Length = 926

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
 Frame = +1

Query: 22   LLNFIYPSLYRLDEV-------LTVEPDRIDGSL---KRLPLTLQCLDTAGLYLLDDGFT 171
            L+  IYP +Y L ++       +  E     G++   + +  T    +  GLYL+D+G  
Sbjct: 748  LIKNIYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNE 807

Query: 172  FLVWLGRMLQPELMNDILGVSLSNFPDLSKIQLRECDNNH-SRNFMAVQRALRERDS-SC 345
              +W+G    P L+ D+ G        + K ++   +N+  ++    +   LR  D    
Sbjct: 808  LFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVENSEFNQRVRNIINQLRNHDDVIT 867

Query: 346  YQLPRVVRQGE--------QPREGFLL----LSNLVEDQMAGTSSYMDWI 459
            YQ   +VR             RE   L     S LVED++    SY +++
Sbjct: 868  YQSLYIVRGASLSEPVNHASAREVATLRLWASSTLVEDKILNNESYREFL 917

>Y423_MYCGE (P47662) Hypothetical protein MG423|
          Length = 561

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
 Frame = +1

Query: 61  EVLTVEPDRIDGSLKRLPLTLQCLDTAGL------------YLLDDGFTFLVWLGRMLQP 204
           EVLT+E  ++D     L L  +C+D+AGL             + + G   ++      + 
Sbjct: 417 EVLTIENKKLDSKKNELKLNPKCVDSAGLQEIGASIMFERDQMSESGVVIIIIYFDQKKS 476

Query: 205 ELMNDI----LGVSLSNFPDLSKIQLR 273
           E +N+I    LGVSL + P+  K++ +
Sbjct: 477 EFLNEITYSFLGVSL-DVPEKDKLKTK 502

>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +1

Query: 34   IYPSLYRLDEVLTVEPDRIDGSL--KRLPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQPE 207
            +YP   R+  V  ++    +GS+    +PL+ + +   G+Y L++G   L+++G  +  +
Sbjct: 932  VYP---RMISVHDLDVKDTEGSVLPPPIPLSSEHISNEGVYFLENGEDGLLFVGESVDSD 988

Query: 208  LMNDILGV-SLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLP 357
            ++  +  V S +  P  ++  L++ DN  S+ F      +R +  S  + P
Sbjct: 989  ILQKLFAVSSAAEIP--NQFVLQQYDNQLSKKFNDAVNEIRRQRCSYLRSP 1037

>VILL_MOUSE (Q91YD6) Villin-like protein (EF-6)|
          Length = 859

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 52  RLDEVLTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDD-GFTFLVWLGRMLQPE 207
           RL  V     D +   L   PLT   L   G YLLD  GF   +W GR   P+
Sbjct: 253 RLYHVCEKGTDLVVQELATRPLTQDLLQEDGCYLLDQGGFKIYMWQGRKSSPQ 305

>SYN_MYCGA (Q7NBM9) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 457

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 55  LDEVLTVEPDRIDGSLKRLPLTL-QCLDTAGLYLLDDGFTFLVWLGRMLQPELMNDILGV 231
           L E   +EP+     L +L + + QC+  A  YL D     L W    L+P L++ +  V
Sbjct: 229 LSEFWMIEPEVSLMDLDKLTILIEQCVKHAIYYLFDYAKPELEWCNENLEPGLIDKLNNV 288

Query: 232 SLSNFPDLSKIQLRE 276
             ++FP   +++ RE
Sbjct: 289 INNDFP---RVEYRE 300

>SIDT1_RAT (Q6Q3F5) SID1 transmembrane family member 1 precursor|
          Length = 831

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = -2

Query: 546 SAAVYTKNKNFWNIHGTSSRALCLAVNLEYPIHVTAGSSHL---VLDEVGQKQEALSWLL 376
           S  V    +N ++ + TS      AV     +HV + S +L   VL  V Q+++ LSW +
Sbjct: 53  SGVVSLSTENIYSFNHTSHPGQVTAVR----VHVNSSSDNLDYPVLVVVRQQKQVLSWQV 108

Query: 375 TLPYNTGQLVTRRIPLPQGSLYCHEVSRVI 286
            LP+           L Q S    EVSR +
Sbjct: 109 PLPFQ---------GLYQRSYNYQEVSRTL 129

>YO070_YEAST (Q08229) Uncharacterized protein YOL070C|
          Length = 501

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 10  EARRLLNFIYPSLYRLDEVLTVEPDRIDGSLKRLPLTLQCLD 135
           E +R L  +  SL RL   + ++PDR +  LKRL    + L+
Sbjct: 458 EEKRALERLVDSLSRLTADMVLDPDRYEEGLKRLDKATKALE 499

>VILI3_ARATH (O81645) Villin-3|
          Length = 966

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 40  PSLYRLDEVLTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDDGFTFLVWLGRMLQPE 207
           P LY + +    + + IDG L +       L+    YLLD G    +W+GR+ Q E
Sbjct: 254 PKLYSIADG---QVESIDGDLSK-----SMLENNKCYLLDCGSEIFIWVGRVTQVE 301

>UL47_EHV4 (P25073) 97 kDa alpha trans-inducing protein (Tegument protein)|
           (GP10)
          Length = 872

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/97 (21%), Positives = 41/97 (42%)
 Frame = +1

Query: 181 WLGRMLQPELMNDILGVSLSNFPDLSKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPR 360
           WL R ++  LM+D L  S     ++SK   +     +   F    R  ++ ++   +L  
Sbjct: 214 WLDRSIR--LMDDALAQS----SEISKAITKSTRRLYDSQFTPGGRGYKQTETPSQRLVH 267

Query: 361 VVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIH 471
           + R G    +  ++  + +E      S+Y  W+  IH
Sbjct: 268 LSRAGMYDSDEIVMTGDYMEVDDDPNSAYQSWVRAIH 304

>VILL_HUMAN (O15195) Villin-like protein|
          Length = 856

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 25  LNFIYPSLYRLDEVLTVEPDRIDGSLKRLPLTLQCLDTAGLYLLDD-GFTFLVWLGRM 195
           +N +  +  RL  V     D +   L   PLT   L     Y+LD  GF   VW GRM
Sbjct: 243 INQLQKANVRLYHVYEKGKDLVVLELATPPLTQDLLQEEDFYILDQGGFKIYVWQGRM 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,835,895
Number of Sequences: 219361
Number of extensions: 2006825
Number of successful extensions: 5793
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5783
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)