| Clone Name | bags14m07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_471148.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3084 Score = 339 bits (171), Expect = 6e-90 Identities = 393/467 (84%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtggaacc 80 ||||||||||||||||||||| || |||||||| |||| ||||||||| || ||||||| Sbjct: 2616 gctgctcaattttatttatccttcattgtacagggttgatgaagtattgtcaatggaacc 2675 Query: 81 agataggattgatgggtccctgaagcggttgccattaaccttacagtgcctagacactgc 140 ||||||||| | ||| ||| |||||||||||||| ||||| | |||||| ||||||||| Sbjct: 2676 agataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttagacactgg 2735 Query: 141 tggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaatgctcca 200 |||| | || |||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 2736 tggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggatgctccc 2795 Query: 201 gcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatctatcaaa 260 ||||| || ||||| ||||||||||||||||| || |||||||||| ||||||||||| Sbjct: 2796 acctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatctatcaaa 2855 Query: 261 gattcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtacaaagagc 320 | |||| |||||||||||||| ||| | |||| ||||| |||||| | ||| | | | Sbjct: 2856 ggttcaattgagagaatgtgataacgagtactccagaaatttcatgaaaatactagggac 2915 Query: 321 cctgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaaggtgagca 380 ||| |||||||||||| |||| | ||||||| ||| || ||||| || ||||| || Sbjct: 2916 cctaagggagagggatccttcttaccaccagctctgccgcgtcgtacgtcagggtgaaca 2975 Query: 381 gccaagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctggaaccag 440 ||||||||| ||||| |||||||| || ||| | |||||||| |||||| |||| || || Sbjct: 2976 gccaagagaaggctttttgcttctatctaacttggtcgaggatcagatgtctgggactag 3035 Query: 441 cagttacatggattggatactccagattcaccgccaaacacagagct 487 |||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 3036 cagttacatggactggatactccaaatccaccgccaaacgcagagct 3082
>dbj|AK120404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088L21, full insert sequence Length = 3678 Score = 339 bits (171), Expect = 6e-90 Identities = 393/467 (84%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtggaacc 80 ||||||||||||||||||||| || |||||||| |||| ||||||||| || ||||||| Sbjct: 2742 gctgctcaattttatttatccttcattgtacagggttgatgaagtattgtcaatggaacc 2801 Query: 81 agataggattgatgggtccctgaagcggttgccattaaccttacagtgcctagacactgc 140 ||||||||| | ||| ||| |||||||||||||| ||||| | |||||| ||||||||| Sbjct: 2802 agataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttagacactgg 2861 Query: 141 tggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaatgctcca 200 |||| | || |||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 2862 tggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggatgctccc 2921 Query: 201 gcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatctatcaaa 260 ||||| || ||||| ||||||||||||||||| || |||||||||| ||||||||||| Sbjct: 2922 acctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatctatcaaa 2981 Query: 261 gattcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtacaaagagc 320 | |||| |||||||||||||| ||| | |||| ||||| |||||| | ||| | | | Sbjct: 2982 ggttcaattgagagaatgtgataacgagtactccagaaatttcatgaaaatactagggac 3041 Query: 321 cctgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaaggtgagca 380 ||| |||||||||||| |||| | ||||||| ||| || ||||| || ||||| || Sbjct: 3042 cctaagggagagggatccttcttaccaccagctctgccgcgtcgtacgtcagggtgaaca 3101 Query: 381 gccaagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctggaaccag 440 ||||||||| ||||| |||||||| || ||| | |||||||| |||||| |||| || || Sbjct: 3102 gccaagagaaggctttttgcttctatctaacttggtcgaggatcagatgtctgggactag 3161 Query: 441 cagttacatggattggatactccagattcaccgccaaacacagagct 487 |||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 3162 cagttacatggactggatactccaaatccaccgccaaacgcagagct 3208
>dbj|AK071693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108J23, full insert sequence Length = 1804 Score = 339 bits (171), Expect = 6e-90 Identities = 393/467 (84%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtggaacc 80 ||||||||||||||||||||| || |||||||| |||| ||||||||| || ||||||| Sbjct: 875 gctgctcaattttatttatccttcattgtacagggttgatgaagtattgtcaatggaacc 934 Query: 81 agataggattgatgggtccctgaagcggttgccattaaccttacagtgcctagacactgc 140 ||||||||| | ||| ||| |||||||||||||| ||||| | |||||| ||||||||| Sbjct: 935 agataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttagacactgg 994 Query: 141 tggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaatgctcca 200 |||| | || |||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 995 tggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggatgctccc 1054 Query: 201 gcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatctatcaaa 260 ||||| || ||||| ||||||||||||||||| || |||||||||| ||||||||||| Sbjct: 1055 acctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatctatcaaa 1114 Query: 261 gattcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtacaaagagc 320 | |||| |||||||||||||| ||| | |||| ||||| |||||| | ||| | | | Sbjct: 1115 ggttcaattgagagaatgtgataacgagtactccagaaatttcatgaaaatactagggac 1174 Query: 321 cctgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaaggtgagca 380 ||| |||||||||||| |||| | ||||||| ||| || ||||| || ||||| || Sbjct: 1175 cctaagggagagggatccttcttaccaccagctctgccgcgtcgtacgtcagggtgaaca 1234 Query: 381 gccaagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctggaaccag 440 ||||||||| ||||| |||||||| || ||| | |||||||| |||||| |||| || || Sbjct: 1235 gccaagagaaggctttttgcttctatctaacttggtcgaggatcagatgtctgggactag 1294 Query: 441 cagttacatggattggatactccagattcaccgccaaacacagagct 487 |||||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 1295 cagttacatggactggatactccaaatccaccgccaaacgcagagct 1341
>dbj|AK071986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094J05, full insert sequence Length = 2007 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtggaacc 80 ||||||||||||||||||||| || |||||||| |||| ||||||||| || ||||||| Sbjct: 1756 gctgctcaattttatttatccttcattgtacagggttgatgaagtattgtcaatggaacc 1815 Query: 81 agataggattgatgggtccctgaagcggttgccattaaccttacagtgcctagacactgc 140 ||||||||| | ||| ||| |||||||||||||| ||||| | |||||| ||||||||| Sbjct: 1816 agataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttagacactgg 1875 Query: 141 tggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaatgctcca 200 |||| | || |||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 1876 tggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggatgctccc 1935 Query: 201 gcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatctatcaaa 260 ||||| || ||||| ||||||||||||||||| || |||||||||| ||||||||||| Sbjct: 1936 acctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatctatcaaa 1995 Query: 261 gattcagttgag 272 | |||| ||||| Sbjct: 1996 ggttcaattgag 2007
>gb|BT016797.1| Zea mays clone Contig630 mRNA sequence Length = 1829 Score = 212 bits (107), Expect = 1e-51 Identities = 376/465 (80%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 18 aaggctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtgga 77 |||||||||||||||||| ||||| ||||||||||| |||| |||||| | ||| |||| Sbjct: 864 aaggctgctcaattttatctatccttctctgtacagagttgatgaagtactcacaatgga 923 Query: 78 accagataggattgatggg---tccctgaagcggttgccattaaccttacagtgcctaga 134 |||| | | | |||||| || ||||||| ||||||||||| || ||||| |||| Sbjct: 924 accaaacaaggttgatgatgtttcattgaagcgattgccattaacgtttcagtgtttaga 983 Query: 135 cactgctggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaat 194 |||| ||||| || || ||||||||||||||||| |||||||| ||||||||||| || Sbjct: 984 tactggaggtttgtacctccttgatgatggcttcactttcctagtgtggttaggtaggat 1043 Query: 195 gctccagcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatct 254 ||||| |||||| || ||||| ||||||||||||| ||| || ||||||||||||| || Sbjct: 1044 gctcccgcctgaacttgtgaacaacattcttggagtgagcttggcaaacttccctgacct 1103 Query: 255 atcaaagattcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtaca 314 |||||||||| |||||||| |||||||| | || ||||| |||||| | ||| Sbjct: 1104 atcaaagattgtattgagagagtgtgacaatgaattgtcaagaaatttcatgaaaatact 1163 Query: 315 aagagccctgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaagg 374 |||| ||||| |||||| |||| |||| | | ||||||| |||||| || || || || Sbjct: 1164 aagatccctgcgggagaaggatccttcctatcaccagctatgccgtgtggtgcgacaggg 1223 Query: 375 tgagcagccaagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctgg 434 ||| ||||||||||| |||| ||||||| || ||||| || ||||||||||||||||| Sbjct: 1224 tgaacagccaagagaaggctatctgcttctatctaaccttgttgaggaccagatggctgg 1283 Query: 435 aaccagcagttacatggattggatactccagattcaccgccaaac 479 ||| || |||||| | |||||||||| || |||||||| ||||| Sbjct: 1284 aacaagtagttacgttgattggatacagcaaattcaccgtcaaac 1328
>gb|AY104615.1| Zea mays PCO111783 mRNA sequence Length = 2510 Score = 204 bits (103), Expect = 2e-49 Identities = 376/465 (80%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 18 aaggctgctcaattttatttatccatctctgtacaggcttgacgaagtattgacagtgga 77 |||||||||||||||||| ||||| ||||||||||| |||| |||||| | ||| |||| Sbjct: 1601 aaggctgctcaattttatctatccttctctgtacaga-ttgatgaagtactcacaatgga 1659 Query: 78 accagataggattgatggg---tccctgaagcggttgccattaaccttacagtgcctaga 134 |||| | | | |||||| || ||||||| ||||||||||| || ||||| |||| Sbjct: 1660 accaaacaaggttgatgatgtttcattgaagcgattgccattaacgtttcagtgtttaga 1719 Query: 135 cactgctggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaat 194 |||| ||||| || || ||||||||||||||||| |||||||| ||||||||||| || Sbjct: 1720 tactggaggtttgtacctccttgatgatggcttcactttcctagtgtggttaggtaggat 1779 Query: 195 gctccagcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatct 254 ||||| |||||| || ||||| ||||||||||||| ||| || ||||||||||||| || Sbjct: 1780 gctcccgcctgaacttgtgaacaacattcttggagtgagcttggcaaacttccctgacct 1839 Query: 255 atcaaagattcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtaca 314 |||||||||| |||||||| |||||||| | || ||||| |||||| | ||| Sbjct: 1840 atcaaagattgtattgagagagtgtgacaatgaattgtcaagaaatttcatgaaaatact 1899 Query: 315 aagagccctgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaagg 374 |||| ||||| |||||| |||| |||| | | ||||||| |||||| || || || || Sbjct: 1900 aagatccctgcgggagaaggatccttcctatcaccagctatgccgtgtggtgcgacaggg 1959 Query: 375 tgagcagccaagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctgg 434 ||| ||||||||||| |||| ||||||| || ||||| || ||||||||||||||||| Sbjct: 1960 tgaacagccaagagaaggctatctgcttctatctaaccttgttgaggaccagatggctgg 2019 Query: 435 aaccagcagttacatggattggatactccagattcaccgccaaac 479 ||| || |||||| | |||||||||| || |||||||| ||||| Sbjct: 2020 aacaagtagttacgttgattggatacagcaaattcaccgtcaaac 2064
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 180 bits (91), Expect = 3e-42 Identities = 163/187 (87%) Strand = Plus / Plus Query: 75 ggaaccagataggattgatgggtccctgaagcggttgccattaaccttacagtgcctaga 134 ||||||||||||||| | ||| ||| |||||||||||||| ||||| | |||||| |||| Sbjct: 146541 ggaaccagataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttaga 146600 Query: 135 cactgctggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaat 194 ||||| |||| | || |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 146601 cactggtggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggat 146660 Query: 195 gctccagcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatct 254 ||||| ||||| || ||||| ||||||||||||||||| || |||||||||| ||||| Sbjct: 146661 gctcccacctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatct 146720 Query: 255 atcaaag 261 ||||||| Sbjct: 146721 atcaaag 146727 Score = 113 bits (57), Expect = 7e-22 Identities = 183/225 (81%) Strand = Plus / Plus Query: 263 ttcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtacaaagagccc 322 |||| |||||||||||||| ||| | |||| ||||| |||||| | ||| | | ||| Sbjct: 146941 ttcaattgagagaatgtgataacgagtactccagaaatttcatgaaaatactagggaccc 147000 Query: 323 tgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaaggtgagcagc 382 | |||||||||||| |||| | ||||||| ||| || ||||| || ||||| |||| Sbjct: 147001 taagggagagggatccttcttaccaccagctctgccgcgtcgtacgtcagggtgaacagc 147060 Query: 383 caagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctggaaccagca 442 ||||||| ||||| |||||||| || ||| | |||||||| |||||| |||| || |||| Sbjct: 147061 caagagaaggctttttgcttctatctaacttggtcgaggatcagatgtctgggactagca 147120 Query: 443 gttacatggattggatactccagattcaccgccaaacacagagct 487 |||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 147121 gttacatggactggatactccaaatccaccgccaaacgcagagct 147165 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattg 69 ||||||||||||||||||||| || |||||||| |||| ||||||||| Sbjct: 146147 gctgctcaattttatttatccttcattgtacagggttgatgaagtattg 146195
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 180 bits (91), Expect = 3e-42 Identities = 163/187 (87%) Strand = Plus / Plus Query: 75 ggaaccagataggattgatgggtccctgaagcggttgccattaaccttacagtgcctaga 134 ||||||||||||||| | ||| ||| |||||||||||||| ||||| | |||||| |||| Sbjct: 1851273 ggaaccagataggatcggtggatccttgaagcggttgccactaaccatgcagtgcttaga 1851332 Query: 135 cactgctggtttatatcttcttgatgatggcttcaccttcctagtatggttaggtagaat 194 ||||| |||| | || |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 1851333 cactggtggtctttaccttcttgatgatgggtttaccttcctagtatggttaggtaggat 1851392 Query: 195 gctccagcctgagctcatgaacgacattcttggagtcagcctgtcaaacttccctgatct 254 ||||| ||||| || ||||| ||||||||||||||||| || |||||||||| ||||| Sbjct: 1851393 gctcccacctgaacttgtgaacaacattcttggagtcagcttggcaaacttccccgatct 1851452 Query: 255 atcaaag 261 ||||||| Sbjct: 1851453 atcaaag 1851459 Score = 113 bits (57), Expect = 7e-22 Identities = 183/225 (81%) Strand = Plus / Plus Query: 263 ttcagttgagagaatgtgacaacaatcactcgagaaacttcatggcagtacaaagagccc 322 |||| |||||||||||||| ||| | |||| ||||| |||||| | ||| | | ||| Sbjct: 1851673 ttcaattgagagaatgtgataacgagtactccagaaatttcatgaaaatactagggaccc 1851732 Query: 323 tgagggagagggattcttcgtgttaccagctgccccgtgttgtacggcaaggtgagcagc 382 | |||||||||||| |||| | ||||||| ||| || ||||| || ||||| |||| Sbjct: 1851733 taagggagagggatccttcttaccaccagctctgccgcgtcgtacgtcagggtgaacagc 1851792 Query: 383 caagagagggcttcttgcttctgtccaacctcgtcgaggaccagatggctggaaccagca 442 ||||||| ||||| |||||||| || ||| | |||||||| |||||| |||| || |||| Sbjct: 1851793 caagagaaggctttttgcttctatctaacttggtcgaggatcagatgtctgggactagca 1851852 Query: 443 gttacatggattggatactccagattcaccgccaaacacagagct 487 |||||||||| ||||||||||| || ||||||||||| ||||||| Sbjct: 1851853 gttacatggactggatactccaaatccaccgccaaacgcagagct 1851897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatccatctctgtacaggcttgacgaagtattg 69 ||||||||||||||||||||| || |||||||| |||| ||||||||| Sbjct: 1850879 gctgctcaattttatttatccttcattgtacagggttgatgaagtattg 1850927
>gb|AC140205.2| Mus musculus BAC clone RP24-344F2 from chromosome 8, complete sequence Length = 140215 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 ctgctggtttatatcttcttga 158 |||||||||||||||||||||| Sbjct: 40931 ctgctggtttatatcttcttga 40910
>gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome 6, complete sequence Length = 181475 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 atcaaagattcagttgagagaatgtg 280 ||||||||||||||||| |||||||| Sbjct: 173822 atcaaagattcagttgacagaatgtg 173797
>gb|AC161189.11| Mus musculus chromosome 8, clone RP23-337N9, complete sequence Length = 186769 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 ctgctggtttatatcttcttga 158 |||||||||||||||||||||| Sbjct: 174341 ctgctggtttatatcttcttga 174320
>gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosome 6, complete sequence Length = 197171 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 atcaaagattcagttgagagaatgtg 280 ||||||||||||||||| |||||||| Sbjct: 32297 atcaaagattcagttgacagaatgtg 32272
>gb|AC079938.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-201C9, complete sequence Length = 143322 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 caattttatttatccatctct 47 ||||||||||||||||||||| Sbjct: 80123 caattttatttatccatctct 80103
>emb|AL115855.1|CNS01CQF Botrytis cinerea strain T4 cDNA library Length = 696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcaagaagg 21 ||||||||||||||||||||| Sbjct: 321 attcggcacgaggcaagaagg 301
>gb|AC092168.4| Homo sapiens BAC clone RP11-784K9 from 2, complete sequence Length = 199871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gctgctcaattttatttatcc 41 ||||||||||||||||||||| Sbjct: 192207 gctgctcaattttatttatcc 192227
>emb|AL672290.16| Mouse DNA sequence from clone RP23-471M13 on chromosome X, complete sequence Length = 178341 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cttggagtcagcctgtcaaac 243 ||||||||||||||||||||| Sbjct: 162580 cttggagtcagcctgtcaaac 162560
>gb|AC165436.5| Mus musculus chromosome 1, clone RP24-81A5, complete sequence Length = 186089 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgctggtttatatcttcttg 157 |||||||||||||||||||| Sbjct: 13169 tgctggtttatatcttcttg 13150
>ref|XM_976638.1| PREDICTED: Mus musculus gene model 1078, (NCBI) (Gm1078), mRNA Length = 3146 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aggattgatgggtccctgaa 104 |||||||||||||||||||| Sbjct: 2522 aggattgatgggtccctgaa 2503
>ref|XM_355840.5| PREDICTED: Mus musculus gene model 1078, (NCBI) (Gm1078), mRNA Length = 3146 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aggattgatgggtccctgaa 104 |||||||||||||||||||| Sbjct: 2522 aggattgatgggtccctgaa 2503
>gb|AC108081.2| Homo sapiens chromosome 16 clone CTC-661I16, complete sequence Length = 100808 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 caacctcgtcgaggaccaga 427 |||||||||||||||||||| Sbjct: 23433 caacctcgtcgaggaccaga 23452
>dbj|AK138915.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530002D02 product:hypothetical Protein kinase/Serine/threonine protein kinase/Tyrosine protein kinase/Protein kinase domain profile/Proline-rich region profile/Protein kinase-like/Myb DNA-binding domain/Serine/threonine protein kinase, active site containing protein, full insert sequence Length = 3154 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aggattgatgggtccctgaa 104 |||||||||||||||||||| Sbjct: 2530 aggattgatgggtccctgaa 2511
>emb|CR391759.1| Gallus gallus finished cDNA, clone ChEST469n6 Length = 917 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 acaacaatcactcgagaaac 300 |||||||||||||||||||| Sbjct: 64 acaacaatcactcgagaaac 45
>emb|BX005484.7| Zebrafish DNA sequence from clone DKEY-25G12, complete sequence Length = 212049 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 caagagagggcttcttgcttctgt 406 |||||||||| ||||||||||||| Sbjct: 55900 caagagagggtttcttgcttctgt 55877
>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1, complete sequence Length = 207004 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 caagagagggcttcttgcttctgt 406 |||||||||| ||||||||||||| Sbjct: 91777 caagagagggtttcttgcttctgt 91754
>gb|AC109299.10| Mus musculus chromosome 1, clone RP24-302F18, complete sequence Length = 141796 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgctggtttatatcttcttg 157 |||||||||||||||||||| Sbjct: 114488 tgctggtttatatcttcttg 114469
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ccaacctcgtcgaggaccag 426 |||||||||||||||||||| Sbjct: 941315 ccaacctcgtcgaggaccag 941296
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 caagagagggcttcttgcttctgt 406 |||||||||| ||||||||||||| Sbjct: 99188 caagagagggtttcttgcttctgt 99165
>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence Length = 200040 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aggattgatgggtccctgaa 104 |||||||||||||||||||| Sbjct: 132786 aggattgatgggtccctgaa 132805 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,944,550 Number of Sequences: 3902068 Number of extensions: 4944550 Number of successful extensions: 91011 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90905 Number of HSP's gapped (non-prelim): 96 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)