ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags15b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome... 430 e-117
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 430 e-117
3dbj|AK110441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
4dbj|AK108312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
5dbj|AK119621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
6dbj|AK070558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
7ref|NM_196951.1| Oryza sativa (japonica cultivar-group) putative... 58 4e-05
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
9gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 58 4e-05
10dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
11dbj|AK101007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
12dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
15dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
16dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
17dbj|AK120596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
18gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.009
20gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
22dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
23gb|AY105791.1| Zea mays PCO061743 mRNA sequence 50 0.009
24emb|Z69370.2|CSNITR1 Cucumis sativus mRNA for nitrite transporte... 48 0.036
25ref|NM_185156.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.56
26gb|AY220099.1| Sphingomonas elodea strain ATCC31461 nitrogen ass... 44 0.56
27gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.56
28gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 44 0.56
29dbj|AK099193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
30dbj|AK058972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
31gb|DQ069385.1| Acorus americanus ATP synthase CF0 B chain (atpF)... 42 2.2
32emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chro... 42 2.2
33emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 2.2
34gb|AE005773.1| Caulobacter crescentus CB15 section 99 of 359 of ... 42 2.2
35gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, r... 42 2.2
36gb|AC147272.3| Pan troglodytes BAC clone RP43-116B9 from chromos... 42 2.2
37gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, comple... 42 2.2
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.2
39gb|AY106418.1| Zea mays PCO154787 mRNA sequence 42 2.2
40gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14... 42 2.2
41emb|AJ879453.1| Acorus calamus chloroplast, complete genome 42 2.2
42ref|NM_190326.1| Oryza sativa (japonica cultivar-group), predic... 40 8.7
43ref|XM_477279.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.7
44gb|AY439172.1| Drosophila melanogaster troponin T (TpnT) gene, c... 40 8.7
45gb|AC150389.2| Branchiostoma floridae clone CH302-114C5, complet... 40 8.7
46ref|XM_581025.2| PREDICTED: Bos taurus similar to Replication pr... 40 8.7
47ref|XM_957962.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.7
48ref|XM_325547.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.7
49gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome... 40 8.7
50ref|XM_756594.1| Ustilago maydis 521 hypothetical protein (UM055... 40 8.7
51gb|AC133186.4| Mus musculus BAC clone RP23-320D8 from chromosome... 40 8.7
52emb|AL390856.9| Human DNA sequence from clone GS1-122H1 on chrom... 40 8.7
53gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, com... 40 8.7
54gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosom... 40 8.7
55gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 8.7
56dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
57gb|AE012356.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.7
58dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 8.7
59gb|AY070875.1| Drosophila melanogaster LD08591 full length cDNA 40 8.7
60gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.7
61dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
63gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell ... 40 8.7
64gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, r... 40 8.7
65ref|XM_215056.1| PREDICTED: Rattus norvegicus similar to Hmx2 pr... 40 8.7
66dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
67dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
68dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
69gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome 40 8.7
70gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 ... 40 8.7
71emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence 40 8.7 
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
             complete sequence
          Length = 178061

 Score =  430 bits (217), Expect = e-117
 Identities = 322/357 (90%)
 Strand = Plus / Minus

                                                                         
Query: 13    gtggcggaggggttctcgtccgtggggcacatggagttcctgtacgaccaggcgccggag 72
             |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 42795 gtggcggaggcgttctcgtcggtggcgcacatggagttcctgtacgaccaggcgccggag 42736

                                                                         
Query: 73    agcatgcgcagcaccgccgccgcgctcttctggctctcggcctccctcggcagctacatg 132
             ||||||||||||| ||||||||||||||||||||||||   ||||||||||| |||||||
Sbjct: 42735 agcatgcgcagcagcgccgccgcgctcttctggctctccagctccctcggcaactacatg 42676

                                                                         
Query: 133   ggcacggtgctcgtgacggcggtgcagagcgccacgcggggcagcggcgactggctccag 192
             |||||||||||||| |||||||||||| |||||||||| ||| ||||||| |||||||||
Sbjct: 42675 ggcacggtgctcgtcacggcggtgcagcgcgccacgcgcggcggcggcgagtggctccag 42616

                                                                         
Query: 193   gacaacatcaaccggggcaggctggacgcctactactggctcgtcacctgcctcatggtg 252
             |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||
Sbjct: 42615 gacaacatcaaccggggcaggctggactgctactactggctcgtcaccaccctcatggtg 42556

                                                                         
Query: 253   ctcaaccttggctactacctcatctgcttccatttctacaccatgaagccattggagttg 312
             ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| ||
Sbjct: 42555 ctcaaccttggatactacctcgtctgcttccacttctacaccatgaagccattagaggtg 42496

                                                                      
Query: 313   gcggaagacggtgaccaccacaaggagtgcgagctgccctccatccacaaaaatggc 369
             || || || |  ||  || | |||||||| |||||  ||||| ||||||||||||||
Sbjct: 42495 gcagaggaagacgatgacgagaaggagtgtgagctctcctccgtccacaaaaatggc 42439



 Score =  222 bits (112), Expect = 1e-54
 Identities = 228/267 (85%), Gaps = 6/267 (2%)
 Strand = Plus / Plus

                                                                         
Query: 34    gtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgcc 93
             |||||||||||||||||||| ||||||||| |||||||||||||||| ||| | || || 
Sbjct: 83650 gtggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcg 83709

                                                                         
Query: 94    gcgctcttctggctctcggcctccctcggcagctacatgggcacggtgctcgtgacggcg 153
             ||||| |||||| || | | ||||||||||| |||| ||||||||||||| || |||| |
Sbjct: 83710 gcgctgttctgggtcgccggctccctcggcaactacctgggcacggtgctggtcacggtg 83769

                                                                         
Query: 154   gtgcagagcgccacgcggggcagcggcgactggctccaggacaacatcaaccggggcagg 213
             |||||||||||||      |||| || || ||||||||||||||||||||| |||| |||
Sbjct: 83770 gtgcagagcgcca------gcagaggggagtggctccaggacaacatcaacagggggagg 83823

                                                                         
Query: 214   ctggacgcctactactggctcgtcacctgcctcatggtgctcaaccttggctactacctc 273
             ||||||  |||||||||||||||||||| |||| ||||||||||||| | ||||||| ||
Sbjct: 83824 ctggactactactactggctcgtcaccttcctcttggtgctcaacctcgcctactacttc 83883

                                        
Query: 274   atctgcttccatttctacaccatgaag 300
              | ||||||||||| |||||| |||||
Sbjct: 83884 gtttgcttccatttttacaccttgaag 83910



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 42    catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
             |||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||| 
Sbjct: 84768 catggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctcta 84709

                    
Query: 102   ctggctc 108
             |||||||
Sbjct: 84708 ctggctc 84702



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 184   tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgt 236
             ||||||||||||||| |||||||||| |||||||||  |||||||||||||||
Sbjct: 97820 tggctccaggacaacctcaaccgggggaggctggaccgctactactggctcgt 97872



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 42    catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
             ||||||||||||||||||||||||||| ||| ||||||| ||||| || || ||||| | 
Sbjct: 97678 catggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgta 97737

                   
Query: 102   ctggct 107
             ||||||
Sbjct: 97738 ctggct 97743



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 184   tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
             ||||| ||||||||| ||||||| | || |||||||  ||||||||||||||||
Sbjct: 84626 tggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtc 84573



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 124   agctacatgggcacggtgctcgtgacggcggtgca 158
             ||||||||| ||||| |||| ||||||||||||||
Sbjct: 97760 agctacatgagcacgctgctggtgacggcggtgca 97794
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  430 bits (217), Expect = e-117
 Identities = 322/357 (90%)
 Strand = Plus / Minus

                                                                            
Query: 13       gtggcggaggggttctcgtccgtggggcacatggagttcctgtacgaccaggcgccggag 72
                |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 19901631 gtggcggaggcgttctcgtcggtggcgcacatggagttcctgtacgaccaggcgccggag 19901572

                                                                            
Query: 73       agcatgcgcagcaccgccgccgcgctcttctggctctcggcctccctcggcagctacatg 132
                ||||||||||||| ||||||||||||||||||||||||   ||||||||||| |||||||
Sbjct: 19901571 agcatgcgcagcagcgccgccgcgctcttctggctctccagctccctcggcaactacatg 19901512

                                                                            
Query: 133      ggcacggtgctcgtgacggcggtgcagagcgccacgcggggcagcggcgactggctccag 192
                |||||||||||||| |||||||||||| |||||||||| ||| ||||||| |||||||||
Sbjct: 19901511 ggcacggtgctcgtcacggcggtgcagcgcgccacgcgcggcggcggcgagtggctccag 19901452

                                                                            
Query: 193      gacaacatcaaccggggcaggctggacgcctactactggctcgtcacctgcctcatggtg 252
                |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||
Sbjct: 19901451 gacaacatcaaccggggcaggctggactgctactactggctcgtcaccaccctcatggtg 19901392

                                                                            
Query: 253      ctcaaccttggctactacctcatctgcttccatttctacaccatgaagccattggagttg 312
                ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| ||
Sbjct: 19901391 ctcaaccttggatactacctcgtctgcttccacttctacaccatgaagccattagaggtg 19901332

                                                                         
Query: 313      gcggaagacggtgaccaccacaaggagtgcgagctgccctccatccacaaaaatggc 369
                || || || |  ||  || | |||||||| |||||  ||||| ||||||||||||||
Sbjct: 19901331 gcagaggaagacgatgacgagaaggagtgtgagctctcctccgtccacaaaaatggc 19901275



 Score =  222 bits (112), Expect = 1e-54
 Identities = 228/267 (85%), Gaps = 6/267 (2%)
 Strand = Plus / Plus

                                                                            
Query: 34       gtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgcc 93
                |||||||||||||||||||| ||||||||| |||||||||||||||| ||| | || || 
Sbjct: 19942486 gtggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcg 19942545

                                                                            
Query: 94       gcgctcttctggctctcggcctccctcggcagctacatgggcacggtgctcgtgacggcg 153
                ||||| |||||| || | | ||||||||||| |||| ||||||||||||| || |||| |
Sbjct: 19942546 gcgctgttctgggtcgccggctccctcggcaactacctgggcacggtgctggtcacggtg 19942605

                                                                            
Query: 154      gtgcagagcgccacgcggggcagcggcgactggctccaggacaacatcaaccggggcagg 213
                |||||||||||||      |||| || || ||||||||||||||||||||| |||| |||
Sbjct: 19942606 gtgcagagcgcca------gcagaggggagtggctccaggacaacatcaacagggggagg 19942659

                                                                            
Query: 214      ctggacgcctactactggctcgtcacctgcctcatggtgctcaaccttggctactacctc 273
                ||||||  |||||||||||||||||||| |||| ||||||||||||| | ||||||| ||
Sbjct: 19942660 ctggactactactactggctcgtcaccttcctcttggtgctcaacctcgcctactacttc 19942719

                                           
Query: 274      atctgcttccatttctacaccatgaag 300
                 | ||||||||||| |||||| |||||
Sbjct: 19942720 gtttgcttccatttttacaccttgaag 19942746



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                            
Query: 42       catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
                |||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||| 
Sbjct: 19943604 catggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctcta 19943545

                       
Query: 102      ctggctc 108
                |||||||
Sbjct: 19943544 ctggctc 19943538



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 184      tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgt 236
                ||||||||||||||| |||||||||| |||||||||  |||||||||||||||
Sbjct: 19956656 tggctccaggacaacctcaaccgggggaggctggaccgctactactggctcgt 19956708



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                            
Query: 42       catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
                ||||||||||||||||||||||||||| ||| ||||||| ||||| || || ||||| | 
Sbjct: 19956514 catggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgta 19956573

                      
Query: 102      ctggct 107
                ||||||
Sbjct: 19956574 ctggct 19956579



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 184      tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
                ||||| ||||||||| ||||||| | || |||||||  ||||||||||||||||
Sbjct: 19943462 tggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtc 19943409



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 124      agctacatgggcacggtgctcgtgacggcggtgca 158
                ||||||||| ||||| |||| ||||||||||||||
Sbjct: 19956596 agctacatgagcacgctgctggtgacggcggtgca 19956630
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>dbj|AK110441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D04, full
            insert sequence
          Length = 2048

 Score =  422 bits (213), Expect = e-115
 Identities = 321/357 (89%)
 Strand = Plus / Plus

                                                                        
Query: 13   gtggcggaggggttctcgtccgtggggcacatggagttcctgtacgaccaggcgccggag 72
            |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 1367 gtggcggaggcgttctcgtcggtggcgcacatggagttcctgtacgaccaggcgccggag 1426

                                                                        
Query: 73   agcatgcgcagcaccgccgccgcgctcttctggctctcggcctccctcggcagctacatg 132
            ||||||||||||| ||||||||||||||||||||||||   ||||||||||| |||||||
Sbjct: 1427 agcatgcgcagcagcgccgccgcgctcttctggctctccagctccctcggcaactacatg 1486

                                                                        
Query: 133  ggcacggtgctcgtgacggcggtgcagagcgccacgcggggcagcggcgactggctccag 192
            |||||||||||||| |||||||||||| |||||||||| ||| ||||||| |||||||||
Sbjct: 1487 ggcacggtgctcgtcacggcggtgcagcgcgccacgcgcggcggcggcgagtggctccag 1546

                                                                        
Query: 193  gacaacatcaaccggggcaggctggacgcctactactggctcgtcacctgcctcatggtg 252
            |||||||||||||||||||||||||||  |||||||||||||||||||  ||||| ||||
Sbjct: 1547 gacaacatcaaccggggcaggctggactgctactactggctcgtcaccaccctcacggtg 1606

                                                                        
Query: 253  ctcaaccttggctactacctcatctgcttccatttctacaccatgaagccattggagttg 312
            ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| ||
Sbjct: 1607 ctcaaccttggatactacctcgtctgcttccacttctacaccatgaagccattagaggtg 1666

                                                                     
Query: 313  gcggaagacggtgaccaccacaaggagtgcgagctgccctccatccacaaaaatggc 369
            || || || |  ||  || | |||||||| |||||  ||||| ||||||||||||||
Sbjct: 1667 gcagaggaagacgatgacgagaaggagtgtgagctctcctccgtccacaaaaatggc 1723
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>dbj|AK108312.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G01, full
           insert sequence
          Length = 737

 Score =  222 bits (112), Expect = 1e-54
 Identities = 228/267 (85%), Gaps = 6/267 (2%)
 Strand = Plus / Plus

                                                                       
Query: 34  gtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgcc 93
           |||||||||||||||||||| ||||||||| |||||||||||||||| ||| | || || 
Sbjct: 290 gtggggcacatggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcg 349

                                                                       
Query: 94  gcgctcttctggctctcggcctccctcggcagctacatgggcacggtgctcgtgacggcg 153
           ||||| |||||| || | | ||||||||||| |||| ||||||||||||| || |||| |
Sbjct: 350 gcgctgttctgggtcgccggctccctcggcaactacctgggcacggtgctggtcacggtg 409

                                                                       
Query: 154 gtgcagagcgccacgcggggcagcggcgactggctccaggacaacatcaaccggggcagg 213
           |||||||||||||      |||| || || ||||||||||||||||||||| |||| |||
Sbjct: 410 gtgcagagcgcca------gcagaggggagtggctccaggacaacatcaacagggggagg 463

                                                                       
Query: 214 ctggacgcctactactggctcgtcacctgcctcatggtgctcaaccttggctactacctc 273
           ||||||  |||||||||||||||||||| |||| ||||||||||||| | ||||||| ||
Sbjct: 464 ctggactactactactggctcgtcaccttcctcttggtgctcaacctcgcctactacttc 523

                                      
Query: 274 atctgcttccatttctacaccatgaag 300
            | ||||||||||| |||||| |||||
Sbjct: 524 gtttgcttccatttttacaccttgaag 550
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>dbj|AK119621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H03, full
            insert sequence
          Length = 2086

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                        
Query: 42   catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
            |||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||| 
Sbjct: 1552 catggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctcta 1611

                   
Query: 102  ctggctc 108
            |||||||
Sbjct: 1612 ctggctc 1618



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 184  tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
            ||||| ||||||||| ||||||| | || |||||||  ||||||||||||||||
Sbjct: 1694 tggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtc 1747
to top
>dbj|AK070558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060I20, full
            insert sequence
          Length = 2209

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                        
Query: 42   catggagttcctgtacgaccaggcgccggagagcatgcgcagcaccgccgccgcgctctt 101
            |||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||| 
Sbjct: 1553 catggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctcta 1612

                   
Query: 102  ctggctc 108
            |||||||
Sbjct: 1613 ctggctc 1619



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 184  tggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
            ||||| ||||||||| ||||||| | || |||||||  ||||||||||||||||
Sbjct: 1695 tggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtc 1748
to top
>ref|NM_196951.1| Oryza sativa (japonica cultivar-group) putative peptide transport
            protein (OSJNBa0079L16.9), mRNA
          Length = 1824

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 34   gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
            |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 1447 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 1491
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 34       gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
                |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 16863462 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 16863506
to top
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
             sequence
          Length = 147452

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 34    gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
             |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 47914 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 47958
to top
>dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A02, full
            insert sequence
          Length = 2061

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 34   gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
            |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 1535 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 1579
to top
>dbj|AK101007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148F24, full
            insert sequence
          Length = 1606

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 34   gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
            |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 1089 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 1133
to top
>dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A04, full
            insert sequence
          Length = 2055

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 34   gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
            |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 1535 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 1579
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 34       gtggggcacatggagttcctgtacgaccaggcgccggagagcatg 78
                |||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 16872502 gtggggcagatcgagttcttctacgaccaggcgccggagagcatg 16872546
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                      
Query: 31      tccgtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagca 85
               |||||||| ||| | |||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 8754290 tccgtgggtcacctcgagttcatgtacgaccagtcgccagagagcatgcggagca 8754344



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                       
Query: 182     actggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
               |||||||||  |||||||||||||| |||||||| |||  || ||||||| |||||
Sbjct: 8754447 actggctccccgacaacatcaaccgcggcaggctcgactacttctactggatcgtc 8754502
to top
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1001_B06
          Length = 134810

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 31    tccgtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagca 85
             |||||||| ||| | |||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 24611 tccgtgggtcacctcgagttcatgtacgaccagtcgccagagagcatgcggagca 24665



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 182   actggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
             |||||||||  |||||||||||||| |||||||| |||  || ||||||| |||||
Sbjct: 24768 actggctccccgacaacatcaaccgcggcaggctcgactacttctactggatcgtc 24823
to top
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 31     tccgtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagca 85
              |||||||| ||| | |||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 169272 tccgtgggtcacctcgagttcatgtacgaccagtcgccagagagcatgcggagca 169326



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 182    actggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
              |||||||||  |||||||||||||| |||||||| |||  || ||||||| |||||
Sbjct: 169429 actggctccccgacaacatcaaccgcggcaggctcgactacttctactggatcgtc 169484
to top
>dbj|AK120596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148A07, full
            insert sequence
          Length = 1998

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 31   tccgtggggcacatggagttcctgtacgaccaggcgccggagagcatgcgcagca 85
            |||||||| ||| | |||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 1449 tccgtgggtcacctcgagttcatgtacgaccagtcgccagagagcatgcggagca 1503



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 182  actggctccaggacaacatcaaccggggcaggctggacgcctactactggctcgtc 237
            |||||||||  |||||||||||||| |||||||| |||  || ||||||| |||||
Sbjct: 1606 actggctccccgacaacatcaaccgcggcaggctcgactacttctactggatcgtc 1661
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09,
              complete sequence
          Length = 167222

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 46     gagttcctgtacgaccaggcgccggagagcatg 78
              |||||| | ||||||||||||||||||||||||
Sbjct: 151816 gagttcttctacgaccaggcgccggagagcatg 151784
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 46      gagttcctgtacgaccaggcgccggagagcatg 78
               |||||| | ||||||||||||||||||||||||
Sbjct: 2114393 gagttcttctacgaccaggcgccggagagcatg 2114361



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 55       tacgaccaggcgccggagagcatgcgcagc 84
                |||||||||| |||||| ||||||||||||
Sbjct: 34271005 tacgaccaggtgccggacagcatgcgcagc 34270976
to top
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 46   gagttcctgtacgaccaggcgccggagagcatg 78
            |||||| | ||||||||||||||||||||||||
Sbjct: 4687 gagttcttctacgaccaggcgccggagagcatg 4655
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 46      gagttcctgtacgaccaggcgccggagagcatg 78
               |||||| | ||||||||||||||||||||||||
Sbjct: 2114405 gagttcttctacgaccaggcgccggagagcatg 2114373



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 55       tacgaccaggcgccggagagcatgcgcagc 84
                |||||||||| |||||| ||||||||||||
Sbjct: 34361477 tacgaccaggtgccggacagcatgcgcagc 34361448
to top
>dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D02, full
            insert sequence
          Length = 2221

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 46   gagttcctgtacgaccaggcgccggagagcatg 78
            |||||| | ||||||||||||||||||||||||
Sbjct: 1584 gagttcttctacgaccaggcgccggagagcatg 1616
to top
>gb|AY105791.1| Zea mays PCO061743 mRNA sequence
          Length = 1045

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 46  gagttcctgtacgaccaggcgccggagagcatg 78
           |||||| | ||||||||||||||||||||||||
Sbjct: 573 gagttcttctacgaccaggcgccggagagcatg 605
to top
>emb|Z69370.2|CSNITR1 Cucumis sativus mRNA for nitrite transporter (NiTR1 gene)
          Length = 1916

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 44   tggagttcctgtacgaccaggcgccggagagc 75
            |||||||| ||||||||||| |||||||||||
Sbjct: 1487 tggagttcatgtacgaccagtcgccggagagc 1518
to top
>ref|NM_185156.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1758

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 55   tacgaccaggcgccggagagcatgcgcagc 84
            |||||||||| |||||| ||||||||||||
Sbjct: 1420 tacgaccaggtgccggacagcatgcgcagc 1449
to top
>gb|AY220099.1| Sphingomonas elodea strain ATCC31461 nitrogen assimilation and gellan
             polysaccharide biosynthesis gene clusters, partial
             sequence
          Length = 19564

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 83    gcaccgccgccgcgctcttctggctc 108
             |||||||||||||||||| |||||||
Sbjct: 16330 gcaccgccgccgcgctctactggctc 16305
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 278     gcttccatttctacaccatgaa 299
               ||||||||||||||||||||||
Sbjct: 4157811 gcttccatttctacaccatgaa 4157832
to top
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete
             sequence
          Length = 143205

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 55    tacgaccaggcgccggagagcatgcgcagc 84
             |||||||||| |||||| ||||||||||||
Sbjct: 63993 tacgaccaggtgccggacagcatgcgcagc 64022
to top
>dbj|AK099193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109G05, full
            insert sequence
          Length = 2088

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 55   tacgaccaggcgccggagagcatgcgcagc 84
            |||||||||| |||||| ||||||||||||
Sbjct: 1574 tacgaccaggtgccggacagcatgcgcagc 1603
to top
>dbj|AK058972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D02, full
            insert sequence
          Length = 2129

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 55   tacgaccaggcgccggagagcatgcgcagc 84
            |||||||||| |||||| ||||||||||||
Sbjct: 1573 tacgaccaggtgccggacagcatgcgcagc 1602
to top
>gb|DQ069385.1| Acorus americanus ATP synthase CF0 B chain (atpF) gene, partial
           cds; chloroplast
          Length = 552

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 271 ctcatctgcttccatttctac 291
           |||||||||||||||||||||
Sbjct: 282 ctcatctgcttccatttctac 262
to top
>emb|AL137800.12| Human DNA sequence from clone RP1-127C7 on chromosome 1q25.1-31.1
            Contains the 3' end of the C1orf16 gene for chromosome 1
            open reading frame 16, the NCF2 gene for neutrophil
            cytosolic factor 2 (65kDa, chronic granulomatous disease,
            autosomal 2), a novel gene, the ARPC5 gene for actin
            related protein 2/3 complex subunit 5 (16kDa), the 5' end
            of the RGL1 gene for ral guanine nucleotide dissociation
            stimulator-like 1, a novel gene (MGC26594) and a CpG
            island, complete sequence
          Length = 185832

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  tagtacctgtagtatagtata 574
            |||||||||||||||||||||
Sbjct: 8260 tagtacctgtagtatagtata 8280
to top
>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             6/8
          Length = 349895

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   accaccacaaggagtgcgagc 346
             |||||||||||||||||||||
Sbjct: 46940 accaccacaaggagtgcgagc 46960
to top
>gb|AE005773.1| Caulobacter crescentus CB15 section 99 of 359 of the complete genome
          Length = 10431

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 76   atgcgcagcaccgccgccgcgctct 100
            |||||| ||||||||||||||||||
Sbjct: 1486 atgcgctgcaccgccgccgcgctct 1510
to top
>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
              BACR48D02, complete sequence
          Length = 181728

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 601    tgaagataatgatcatgatcc 621
              |||||||||||||||||||||
Sbjct: 139104 tgaagataatgatcatgatcc 139084
to top
>gb|AC147272.3| Pan troglodytes BAC clone RP43-116B9 from chromosome 7, complete
             sequence
          Length = 186339

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     gcacgagggggtggcggaggg 23
             |||||||||||||||||||||
Sbjct: 53974 gcacgagggggtggcggaggg 53954
to top
>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence
          Length = 183991

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 388   ggcttggtataagaataagat 408
             |||||||||||||||||||||
Sbjct: 55054 ggcttggtataagaataagat 55074
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 279     cttccatttctacaccatgaa 299
               |||||||||||||||||||||
Sbjct: 1548120 cttccatttctacaccatgaa 1548100
to top
>gb|AY106418.1| Zea mays PCO154787 mRNA sequence
          Length = 2101

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 16   gcggaggggttctcgtccgtggggcacatggagttcctgtacgaccaggcgcc 68
            ||||||| |||| | | |||||||||  |||||||| | ||||||||||||||
Sbjct: 1615 gcggaggtgttcaccttcgtggggcagctggagttcttctacgaccaggcgcc 1667
to top
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete
             sequence
          Length = 290034

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 601   tgaagataatgatcatgatcc 621
             |||||||||||||||||||||
Sbjct: 59864 tgaagataatgatcatgatcc 59844
to top
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 271   ctcatctgcttccatttctac 291
             |||||||||||||||||||||
Sbjct: 12128 ctcatctgcttccatttctac 12148
to top
>ref|NM_190326.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 37   gggcacatggagttcctgtacgaccaggcgcc 68
            ||||| ||||||||| | ||||||||||||||
Sbjct: 1390 gggcagatggagttcttctacgaccaggcgcc 1421
to top
>ref|XM_477279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1536

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  gcgcagcaccgccgccgcgc 97
           ||||||||||||||||||||
Sbjct: 237 gcgcagcaccgccgccgcgc 218
to top
>gb|AY439172.1| Drosophila melanogaster troponin T (TpnT) gene, complete cds,
            alternatively spliced
          Length = 8922

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 483  tacgtactaactaattcaaggatc 506
            ||||||||||||||||||| ||||
Sbjct: 2594 tacgtactaactaattcaacgatc 2617
to top
>gb|AC150389.2| Branchiostoma floridae clone CH302-114C5, complete sequence
          Length = 192476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    tgccctccatccacaaaaat 366
              ||||||||||||||||||||
Sbjct: 126587 tgccctccatccacaaaaat 126568
to top
>ref|XM_581025.2| PREDICTED: Bos taurus similar to Replication protein A 70 kDa
            DNA-binding subunit (RP-A) (RF-A) (Replication factor-A
            protein 1) (Single-stranded DNA-binding protein)
            (LOC504844), mRNA
          Length = 2732

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  tgacggcggtgcagagcgcc 165
            ||||||||||||||||||||
Sbjct: 1905 tgacggcggtgcagagcgcc 1924
to top
>ref|XM_957962.1| Neurospora crassa OR74A hypothetical protein (NCU05693.1) partial
           mRNA
          Length = 2184

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ctcaaccttggctactacct 272
           ||||||||||||||||||||
Sbjct: 763 ctcaaccttggctactacct 782
to top
>ref|XM_325547.1| Neurospora crassa OR74A hypothetical protein (NCU05693.1) partial
           mRNA
          Length = 2184

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ctcaaccttggctactacct 272
           ||||||||||||||||||||
Sbjct: 763 ctcaaccttggctactacct 782
to top
>gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome 18, complete sequence
          Length = 175316

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    ctcatctgcttccatttcta 290
              ||||||||||||||||||||
Sbjct: 114334 ctcatctgcttccatttcta 114353
to top
>ref|XM_756594.1| Ustilago maydis 521 hypothetical protein (UM05540.1) partial mRNA
          Length = 6357

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 183  ctggctccaggacaacatcaaccg 206
            |||||| |||||||||||||||||
Sbjct: 1284 ctggcttcaggacaacatcaaccg 1307
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>gb|AC133186.4| Mus musculus BAC clone RP23-320D8 from chromosome 18, complete sequence
          Length = 209380

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    ctcatctgcttccatttcta 290
              ||||||||||||||||||||
Sbjct: 138213 ctcatctgcttccatttcta 138194
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>emb|AL390856.9| Human DNA sequence from clone GS1-122H1 on chromosome 1q25.1-25.3
             Contains two novel genes (LOC400799) and a yippee protein
             pseudogene, complete sequence
          Length = 143714

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 246   catggtgctcaaccttggctacta 269
             |||||| |||||||||||||||||
Sbjct: 79963 catggttctcaaccttggctacta 79986
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>gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, complete sequence
          Length = 137691

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ctgtagtatagtataagcat 579
             ||||||||||||||||||||
Sbjct: 15550 ctgtagtatagtataagcat 15569
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>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ccttggctactacctcatct 277
             ||||||||||||||||||||
Sbjct: 98505 ccttggctactacctcatct 98524
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     cgtgacggcggtgcagagcg 163
               ||||||||||||||||||||
Sbjct: 1291058 cgtgacggcggtgcagagcg 1291077
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>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065G12
          Length = 165006

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 37     gggcacatggagttcctgtacgaccaggcgcc 68
              ||||| ||||||||| | ||||||||||||||
Sbjct: 104982 gggcagatggagttcttctacgaccaggcgcc 105013
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>gb|AE012356.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 264
            of 460 of the complete genome
          Length = 10623

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  acggcggcgccgccagcggc 390
            ||||||||||||||||||||
Sbjct: 1638 acggcggcgccgccagcggc 1657
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 457     tgtatacttgtagtaagtat 476
               ||||||||||||||||||||
Sbjct: 2344187 tgtatacttgtagtaagtat 2344206
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>gb|AY070875.1| Drosophila melanogaster LD08591 full length cDNA
          Length = 1976

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 483  tacgtactaactaattcaaggatc 506
            ||||||||||||||||||| ||||
Sbjct: 1563 tacgtactaactaattcaacgatc 1586
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 371     acggcggcgccgccagcggc 390
               ||||||||||||||||||||
Sbjct: 2003408 acggcggcgccgccagcggc 2003389
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      gcgcagcaccgccgccgcgc 97
               ||||||||||||||||||||
Sbjct: 8509812 gcgcagcaccgccgccgcgc 8509793
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 37       gggcacatggagttcctgtacgaccaggcgcc 68
                ||||| ||||||||| | ||||||||||||||
Sbjct: 39303276 gggcagatggagttcttctacgaccaggcgcc 39303307
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>gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 173810

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   ttccatttctacaccatgaa 299
             ||||||||||||||||||||
Sbjct: 73840 ttccatttctacaccatgaa 73821
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>gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone
             BACR30C16, complete sequence
          Length = 185810

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 483   tacgtactaactaattcaaggatc 506
             ||||||||||||||||||| ||||
Sbjct: 91971 tacgtactaactaattcaacgatc 91948
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>ref|XM_215056.1| PREDICTED: Rattus norvegicus similar to Hmx2 protein (LOC293538),
           mRNA
          Length = 784

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gacggcggtgcagagcgcca 166
           ||||||||||||||||||||
Sbjct: 235 gacggcggtgcagagcgcca 254
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>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0551C06
          Length = 149829

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 37    gggcacatggagttcctgtacgaccaggcgcc 68
             ||||| ||||||||| | ||||||||||||||
Sbjct: 84522 gggcagatggagttcttctacgaccaggcgcc 84553
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    gcgcagcaccgccgccgcgc 97
             ||||||||||||||||||||
Sbjct: 42280 gcgcagcaccgccgccgcgc 42261
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>dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E02, full
           insert sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  gcgcagcaccgccgccgcgc 97
           ||||||||||||||||||||
Sbjct: 237 gcgcagcaccgccgccgcgc 218
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>gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome
          Length = 52797

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 367   ggcaacggcggcgccgccagcggcttgg 394
             ||||||||||||||||| ||||| ||||
Sbjct: 33795 ggcaacggcggcgccgcgagcggtttgg 33822
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>gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 of 74 of the complete
             sequence
          Length = 307761

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 483   tacgtactaactaattcaaggatc 506
             ||||||||||||||||||| ||||
Sbjct: 44678 tacgtactaactaattcaacgatc 44655
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>emb|BX629358.1|CNS09SBU Tetraodon nigroviridis BAC sequence
          Length = 157345

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   cgagctgccctccatccaca 361
             ||||||||||||||||||||
Sbjct: 44893 cgagctgccctccatccaca 44912


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,976,076
Number of Sequences: 3902068
Number of extensions: 4976076
Number of successful extensions: 88507
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87426
Number of HSP's gapped (non-prelim): 1081
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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