| Clone Name | bags15b03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 Score = 1027 bits (518), Expect = 0.0 Identities = 604/633 (95%) Strand = Plus / Plus Query: 13 cttctggancagactacacagttgagatgtccgctattcattgtagccgaggacattact 72 |||||||| |||||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 706 cttctggagcagactacacagttgagatgccctctgtttattgtagctgaggacattacc 765 Query: 73 ggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcg 132 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 766 ggtgaagctttggcaactcttgttgttaacaagctcagaggtattattaatgttgcggcg 825 Query: 133 atcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 826 atcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccattgtg 885 Query: 193 acaggtgctgaatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagac 252 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 886 acaggtgctgaatacctggcgaaggatcttggtctgttggttgagaatgcaacagtagac 945 Query: 253 caacttgggacagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagat 312 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 946 caacttgggacagcaaggaaaatcacaatccatcagactacaacaaccctcatagcagat 1005 Query: 313 gcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaa 372 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1006 gcggctagcaaagacgagatccaggccagggttgcacagctaaagaaggagctttctgaa 1065 Query: 373 actgattccatctatgattctgagaaattggctgagaggattgccaagctttctggtggt 432 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1066 actgattccatctatgactcagagaaattggctgagaggattgccaagctttctggcggt 1125 Query: 433 gtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcgg 492 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 1126 gtggccgtcatcaaggttggagcaacaaccgagacagagctcgaagaccgtcagcttcgg 1185 Query: 493 atcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggt 552 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1186 atcgaggacgcgaagaatgccactttcgcagccatcgaggagggcattgttcccggtggt 1245 Query: 553 ggtgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagac 612 || ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1246 ggcgcggcgtatgtgcacctgtctacctatgtccctgcgatcaaagaaacaatcgaagac 1305 Query: 613 cacgacgagcgccttggtgctgacatcattcag 645 ||||||||||||||||||||||||||||||||| Sbjct: 1306 cacgacgagcgccttggtgctgacatcattcag 1338
>dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D12, full insert sequence Length = 1985 Score = 543 bits (274), Expect = e-151 Identities = 535/622 (86%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 906 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 965 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 966 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 1025 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggtgctg 202 ||||||| |||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 1026 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggcgctg 1085 Query: 203 aatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagaccaacttggga 262 ||| ||||| || || || ||| || ||||||||||||| || | ||| |||||||||| Sbjct: 1086 aatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagcaacttggga 1145 Query: 263 cagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgcagctagca 322 |||| || ||| ||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1146 cagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgcagctagca 1205 Query: 323 aagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaactgattcca 382 |||| ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| | Sbjct: 1206 aagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaactgattcga 1265 Query: 383 tctatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgtca 442 | |||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1266 tatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgtggctgtca 1325 Query: 443 tcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacg 502 |||||||||| || |||||||||| ||||| |||||||| || || || |||||||| | Sbjct: 1326 tcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtatcgaggatg 1385 Query: 503 cgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggcat 562 ||||||| || |||||||| || || ||||||||||||||||| || |||||| | || | Sbjct: 1386 cgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtggtacagcgt 1445 Query: 563 atgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagaccacgacgagc 622 ||||||| || || || ||||||||||||||||||||||| |||||||| || |||| Sbjct: 1446 atgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagaccatgatgagc 1505 Query: 623 gccttggtgctgacatcattca 644 |||||||||| ||||| ||||| Sbjct: 1506 gccttggtgcagacattattca 1527
>dbj|AK119223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D06, full insert sequence Length = 1119 Score = 539 bits (272), Expect = e-150 Identities = 506/584 (86%) Strand = Plus / Plus Query: 61 gaggacattactggtgaagctttggcgactcttgttgttaacaagctcagaggtattatt 120 |||||||||||||| ||||||||||| || ||||||||||| |||||| |||| ||| | Sbjct: 15 gaggacattactggcgaagctttggcaacccttgttgttaataagctccgaggaattctc 74 Query: 121 aacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggat 180 || ||||| || ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 75 aatgttgcagcaatcaaagccccaagttttggtgagcgacgcaaggctgtccttcaggat 134 Query: 181 attgccatcgtgacaggtgctgaatacctagcgaaggatcttggtctgttggttgagaat 240 |||||||| |||||||| ||||||| ||||| || || || ||| || ||||||||||| Sbjct: 135 attgccattgtgacaggcgctgaatttctagcaaaagacctgggtttgctggttgagaat 194 Query: 241 gcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcagactacaaccacc 300 || || | ||| |||||||||||||| || ||| ||||||| |||||||||||||| ||| Sbjct: 195 gcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcagactacaacaacc 254 Query: 301 ctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaag 360 |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 255 ctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcacagctaaagaag 314 Query: 361 gagctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaag 420 || || || ||||||||||| || |||||| | ||||||||||||||||||||||| ||| Sbjct: 315 gaactctccgaaactgattcgatatatgatacagagaaattggctgagaggattgcaaag 374 Query: 421 ctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggac 480 ||||||||||||||||| |||||||||||||| || |||||||||| ||||| |||||| Sbjct: 375 ctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactgagcttgaggac 434 Query: 481 cgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcatt 540 || || || || |||||||| |||||||| || |||||||| || || |||||||||||| Sbjct: 435 cgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattgaggagggcatt 494 Query: 541 gttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaa 600 ||||| || |||||| | || |||||||| || || || |||||||||||||||||| Sbjct: 495 gttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctgcgatcaaagaa 554 Query: 601 acaattgaagaccacgacgagcgccttggtgctgacatcattca 644 ||||| |||||||| || |||||||||||||| ||||| ||||| Sbjct: 555 acaatcgaagaccatgatgagcgccttggtgcagacattattca 598
>dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K17, full insert sequence Length = 2070 Score = 535 bits (270), Expect = e-149 Identities = 534/622 (85%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 908 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 967 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 968 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 1027 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggtgctg 202 ||||||| |||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 1028 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggcgctg 1087 Query: 203 aatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagaccaacttggga 262 ||| ||||| || || || ||| || ||||||||||||| || | ||| |||||||||| Sbjct: 1088 aatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagcaacttggga 1147 Query: 263 cagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgcagctagca 322 |||| || ||| ||||||| |||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 1148 cagcgagaaaagtcacaatacatcaggctacaacaaccctcatagcggatgcagctagca 1207 Query: 323 aagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaactgattcca 382 |||| ||||| ||||| ||||||||||||||||||||||| || || ||||||||||| | Sbjct: 1208 aagatgagattcaggcaagggttgcacagctaaagaaggaactctccgaaactgattcga 1267 Query: 383 tctatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgtca 442 | |||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1268 tatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgtggctgtca 1327 Query: 443 tcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacg 502 |||||||||| || |||||||||| ||||| |||||||| || || || |||||||| | Sbjct: 1328 tcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtatcgaggatg 1387 Query: 503 cgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggcat 562 ||||||| || |||||||| || || ||||||||||||||||| || |||||| | || | Sbjct: 1388 cgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtggtacagcgt 1447 Query: 563 atgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagaccacgacgagc 622 ||||||| || || || ||||||||||||||||||||||| |||||||| || |||| Sbjct: 1448 atgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagaccatgatgagc 1507 Query: 623 gccttggtgctgacatcattca 644 |||||||||| ||||| ||||| Sbjct: 1508 gccttggtgcagacattattca 1529
>dbj|AK119217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E10, full insert sequence Length = 1543 Score = 535 bits (270), Expect = e-149 Identities = 534/622 (85%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 435 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 494 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 495 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 554 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggtgctg 202 ||||||| |||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 555 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggcgctg 614 Query: 203 aatacctagcgaaggatcttggtctgttggttgagaatgcgacggtagaccaacttggga 262 ||| ||||| || || || ||| || ||||||||||||| || | ||| |||||||||| Sbjct: 615 aatttctagcaaaagacctgggtttgctggttgagaatgcaactgaagagcaacttggga 674 Query: 263 cagcaaggaaaatcacaattcatcagactacaaccaccctcatagcagatgcagctagca 322 |||| || ||| ||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 675 cagcgagaaaagtcacaatacatcagactacaacaaccctcatagcggatgcagctagca 734 Query: 323 aagacgagatccaggcgagggttgcacagctaaagaaggagctttctgaaactgattcca 382 |||| ||||| ||||| |||||||||||||||||||||| || || ||||||||||| | Sbjct: 735 aagatgagattcaggcaagggttgcacagctaaagaagggactctccgaaactgattcga 794 Query: 383 tctatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgtca 442 | |||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 795 tatatgatacagagaaattggctgagaggattgcaaagctttctggtggtgtggctgtca 854 Query: 443 tcaaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacg 502 |||||||||| || |||||||||| ||||| |||||||| || || || |||||||| | Sbjct: 855 tcaaggttggggctgcaactgagactgagcttgaggaccgccaactacgtatcgaggatg 914 Query: 503 cgaagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggcat 562 ||||||| || |||||||| || || ||||||||||||||||| || |||||| | || | Sbjct: 915 cgaagaatgcaactttcgcagctattgaggagggcattgttcctggaggtggtacagcgt 974 Query: 563 atgtgcacctatctacctatgtccctgcgatcaaagaaacaattgaagaccacgacgagc 622 ||||||| || || || ||||||||||||||||||||||| |||||||| || |||| Sbjct: 975 atgtgcatctttcaactaccgtccctgcgatcaaagaaacaatcgaagaccatgatgagc 1034 Query: 623 gccttggtgctgacatcattca 644 |||||||||| ||||| ||||| Sbjct: 1035 gccttggtgcagacattattca 1056
>gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence Length = 2106 Score = 492 bits (248), Expect = e-136 Identities = 500/584 (85%) Strand = Plus / Plus Query: 61 gaggacattactggtgaagctttggcgactcttgttgttaacaagctcagaggtattatt 120 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 949 gaggacattactggtgaagctttggcaactcttgttgttaacaagcttcgaggaattctc 1008 Query: 121 aacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggat 180 || ||||| ||||| || || |||||||| |||||||||||||||||||| |||||||| Sbjct: 1009 aatgttgcagcgattaaggctccaagttttggtgagcggcggaaggctgtacttcaggac 1068 Query: 181 attgccatcgtgacaggtgctgaatacctagcgaaggatcttggtctgttggttgagaat 240 ||||||||||| ||||||||||| | |||||| || ||||||||| |||||||||| ||| Sbjct: 1069 attgccatcgtcacaggtgctgagttcctagcaaaagatcttggtttgttggttgaaaat 1128 Query: 241 gcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcagactacaaccacc 300 || || | || |||||||| |||||||||||| |||| || |||||||||||||| ||| Sbjct: 1129 gctacagaggaacaacttggcacagcaaggaaagtcacgatacatcagactacaacaacc 1188 Query: 301 ctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaag 360 ||||||||||||||||| || ||||| ||||||||||||||| ||||||| || |||||| Sbjct: 1189 ctcatagcagatgcagccagtaaagatgagatccaggcgaggattgcacaactgaagaag 1248 Query: 361 gagctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaag 420 |||||| |||| |||||||| | |||||| ||||||||||||||||||| ||||| ||| Sbjct: 1249 gagcttgctgagactgattcagtttatgatactgagaaattggctgagagaattgctaag 1308 Query: 421 ctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggac 480 ||| | |||||||| || || |||||||||||||| |||||||||| ||||| |||||| Sbjct: 1309 cttgccggtggtgttgctgttatcaaggttggagctgcaactgagactgagcttgaggac 1368 Query: 481 cgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcatt 540 || || || | || ||||| || || || |||||||| || || || |||||||||||| Sbjct: 1369 cgccaactaagaattgaggatgcaaaaaatgccacttttgcagctatagaggagggcatt 1428 Query: 541 gttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaa 600 ||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 1429 gttccaggaggtggtgcggcatatgtgcacctatctacggttgtccctaagatcaaagaa 1488 Query: 601 acaattgaagaccacgacgagcgccttggtgctgacatcattca 644 ||||||| |||| || ||||| ||||| ||||| || ||||| Sbjct: 1489 gcaattgaggaccctgatgagcgtcttggcgctgatattattca 1532
>gb|AY108518.1| Zea mays PCO123570 mRNA sequence Length = 1387 Score = 492 bits (248), Expect = e-136 Identities = 500/584 (85%) Strand = Plus / Plus Query: 61 gaggacattactggtgaagctttggcgactcttgttgttaacaagctcagaggtattatt 120 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 208 gaggacattactggtgaagctttggcaactcttgttgttaacaagcttcgaggaattctc 267 Query: 121 aacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggat 180 || ||||| ||||| || || |||||||| |||||||||||||||||||| |||||||| Sbjct: 268 aatgttgcagcgattaaggctccaagttttggtgagcggcggaaggctgtacttcaggac 327 Query: 181 attgccatcgtgacaggtgctgaatacctagcgaaggatcttggtctgttggttgagaat 240 ||||||||||| ||||||||||| | |||||| || ||||||||| |||||||||| ||| Sbjct: 328 attgccatcgtcacaggtgctgagttcctagcaaaagatcttggtttgttggttgaaaat 387 Query: 241 gcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcagactacaaccacc 300 || || | || |||||||| |||||||||||| |||| || |||||||||||||| ||| Sbjct: 388 gctacagaggaacaacttggcacagcaaggaaagtcacgatacatcagactacaacaacc 447 Query: 301 ctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaag 360 ||||||||||||||||| || ||||| ||||||||||||||| ||||||| || |||||| Sbjct: 448 ctcatagcagatgcagccagtaaagatgagatccaggcgaggattgcacaactgaagaag 507 Query: 361 gagctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaag 420 |||||| |||| |||||||| | |||||| ||||||||||||| ||||| ||||| ||| Sbjct: 508 gagcttgctgagactgattcagtttatgatactgagaaattggccgagagaattgctaag 567 Query: 421 ctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggac 480 ||| | |||||||| || || |||||||||||||| |||||||||| ||||| |||||| Sbjct: 568 cttgccggtggtgttgctgttatcaaggttggagctgcaactgagactgagcttgaggac 627 Query: 481 cgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcatt 540 || ||||| | || ||||| || || || |||||||| || || || |||||||||||| Sbjct: 628 cggcagctaagaattgaggatgcaaaaaatgccacttttgcagctatagaggagggcatt 687 Query: 541 gttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctgcgatcaaagaa 600 ||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 688 gttccaggaggtggtgcggcatatgtgcacctatctacggttgtccctaagatcaaagaa 747 Query: 601 acaattgaagaccacgacgagcgccttggtgctgacatcattca 644 ||||||| |||| || ||||| ||||| ||||| || ||||| Sbjct: 748 gcaattgaggaccctgatgagcggcttggcgctgatattattca 791
>dbj|AK061410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-B08, full insert sequence Length = 1087 Score = 488 bits (246), Expect = e-134 Identities = 468/542 (86%) Strand = Plus / Plus Query: 103 aagctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcggcgg 162 |||||| |||| ||| | || ||||| || ||||||||||||||||| |||||||| || Sbjct: 5 aagctccgaggaattctcaatgttgcagcaatcaaagccccaagttttggtgagcgacgc 64 Query: 163 aaggctgtccttcaggatattgccatcgtgacaggtgctgaatacctagcgaaggatctt 222 |||||||||||||||||||||||||| |||||||| ||||||| ||||| || || || Sbjct: 65 aaggctgtccttcaggatattgccattgtgacaggcgctgaatttctagcaaaagacctg 124 Query: 223 ggtctgttggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaatt 282 ||| || ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| Sbjct: 125 ggtttgctggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaata 184 Query: 283 catcagactacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagg 342 |||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 185 catcagactacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagg 244 Query: 343 gttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaattg 402 |||||||||||||||||||| || || ||||||||||| || |||||| | ||||||||| Sbjct: 245 gttgcacagctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattg 304 Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 305 gctgagaggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaact 364 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 ||||| ||||| |||||||| || || || |||||||| |||||||| || |||||||| Sbjct: 365 gagactgagcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgca 424 Query: 523 gccatcgaggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctat 582 || || ||||||||||||||||| || |||||| | || |||||||| || || || Sbjct: 425 gctattgaggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactacc 484 Query: 583 gtccctgcgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcatt 642 ||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| ||| Sbjct: 485 gtccctgcgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattatt 544 Query: 643 ca 644 || Sbjct: 545 ca 546
>emb|AJ234407.1|HVU234407 Hordeum vulgare partial mRNA; clone cMWG0655 Length = 247 Score = 400 bits (202), Expect = e-108 Identities = 219/230 (95%) Strand = Plus / Minus Query: 416 ccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcg 475 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ccaatctttctggtggtgtvgccgtcatcaaggttggagcaacaactgagacagagctcg 184 Query: 476 aggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagg 535 ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| Sbjct: 183 aggaccgtcagctgcsgatcgaggmcgsgaagaacnccactttcgctgccatcgaggagg 124 Query: 536 gcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctgcgatca 595 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 123 gcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgttcctkcgatca 64 Query: 596 aagaaacaattgaagaccacgacgagcgccttggtgctgacatcattcag 645 ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 63 aagaaacaattgaagaccacgvcgagcbncttggtgctgacatcattcag 14
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 394 bits (199), Expect = e-106 Identities = 361/415 (86%) Strand = Plus / Plus Query: 230 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 289 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 10295699 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 10295758 Query: 290 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 349 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 10295759 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 10295818 Query: 350 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 409 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 10295819 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 10295878 Query: 410 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 469 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 10295879 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 10295938 Query: 470 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 529 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 10295939 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 10295998 Query: 530 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 589 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 10295999 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 10296058 Query: 590 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattca 644 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| Sbjct: 10296059 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattca 10296113 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 10295053 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 10295112 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 10295113 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 10295172 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggt 198 ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 10295173 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggt 10295228
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 394 bits (199), Expect = e-106 Identities = 361/415 (86%) Strand = Plus / Plus Query: 230 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 289 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 10295581 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 10295640 Query: 290 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 349 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 10295641 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 10295700 Query: 350 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 409 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 10295701 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 10295760 Query: 410 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 469 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 10295761 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 10295820 Query: 470 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 529 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 10295821 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 10295880 Query: 530 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 589 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 10295881 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 10295940 Query: 590 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattca 644 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| Sbjct: 10295941 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattca 10295995 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 10294935 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 10294994 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 10294995 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 10295054 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggt 198 ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 10295055 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggt 10295110
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 394 bits (199), Expect = e-106 Identities = 361/415 (86%) Strand = Plus / Plus Query: 230 tggttgagaatgcgacggtagaccaacttgggacagcaaggaaaatcacaattcatcaga 289 ||||||||||||| || | ||| |||||||||||||| || ||| ||||||| ||||||| Sbjct: 58618 tggttgagaatgcaactgaagagcaacttgggacagcgagaaaagtcacaatacatcaga 58677 Query: 290 ctacaaccaccctcatagcagatgcagctagcaaagacgagatccaggcgagggttgcac 349 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 58678 ctacaacaaccctcatagcggatgcagctagcaaagatgagattcaggcaagggttgcac 58737 Query: 350 agctaaagaaggagctttctgaaactgattccatctatgattctgagaaattggctgaga 409 ||||||||||||| || || ||||||||||| || |||||| | |||||||||||||||| Sbjct: 58738 agctaaagaaggaactctccgaaactgattcgatatatgatacagagaaattggctgaga 58797 Query: 410 ggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagacag 469 ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| | Sbjct: 58798 ggattgcaaagctttctggtggtgtggctgtcatcaaggttggggctgcaactgagactg 58857 Query: 470 agctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgctgccatcg 529 |||| |||||||| || || || |||||||| |||||||| || |||||||| || || | Sbjct: 58858 agcttgaggaccgccaactacgtatcgaggatgcgaagaatgcaactttcgcagctattg 58917 Query: 530 aggagggcattgttcccggtggtggtgcggcatatgtgcacctatctacctatgtccctg 589 |||||||||||||||| || |||||| | || |||||||| || || || ||||||| Sbjct: 58918 aggagggcattgttcctggaggtggtacagcgtatgtgcatctttcaactaccgtccctg 58977 Query: 590 cgatcaaagaaacaattgaagaccacgacgagcgccttggtgctgacatcattca 644 |||||||||||||||| |||||||| || |||||||||||||| ||||| ||||| Sbjct: 58978 cgatcaaagaaacaatcgaagaccatgatgagcgccttggtgcagacattattca 59032 Score = 159 bits (80), Expect = 1e-35 Identities = 152/176 (86%) Strand = Plus / Plus Query: 23 agactacacagttgagatgtccgctattcattgtagccgaggacattactggtgaagctt 82 |||| |||||||||||| ||| || || ||| | || |||||||||||||| ||||||| Sbjct: 57972 agacaacacagttgagagctccactgtttattattgctgaggacattactggcgaagctt 58031 Query: 83 tggcgactcttgttgttaacaagctcagaggtattattaacgttgcggcgatcaaagccc 142 |||| || ||||||||||| |||||| |||| ||| | || ||||| || |||||||||| Sbjct: 58032 tggcaacccttgttgttaataagctccgaggaattctcaatgttgcagcaatcaaagccc 58091 Query: 143 caagtttcggtgagcggcggaaggctgtccttcaggatattgccatcgtgacaggt 198 ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 58092 caagttttggtgagcgacgcaaggctgtccttcaggatattgccattgtgacaggt 58147
>emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alpha subunit Length = 1975 Score = 135 bits (68), Expect = 2e-28 Identities = 131/152 (86%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||||||||| ||||| ||||||||||| |||||||| || || |||||| | ||| Sbjct: 1275 gctgagaggattgctaagctctctggtggtgttgccgtcattaaagtcggagcagcgact 1334 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 ||||| ||||||||||||||| |||| || || ||||| || |||||||| || |||||| Sbjct: 1335 gagaccgagctcgaggaccgtaagcttcgtattgaggatgcaaagaacgcaacgttcgct 1394 Query: 523 gccatcgaggagggcattgttcccggtggtgg 554 || |||||||| || || |||||||||||||| Sbjct: 1395 gctatcgaggaaggaatagttcccggtggtgg 1426
>gb|AY108560.1| Zea mays PCO140434 mRNA sequence Length = 2143 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Plus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 ||||||||||| |||||||||||||| |||||||| || | || ||||| |||| ||| Sbjct: 1262 atagcagatgctgctagcaaagacgatatccaggccagaatcgcgcagctgaagagagag 1321 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || | ||||| |||||||| ||||| ||||| ||||| |||||| Sbjct: 1322 ctttctcagacggactcgacgtatgactctgagaagttggcagagagaattgcaaagctt 1381 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 |||||||| || || || | |||||||||||| | || ||| ||||||| |||||||| Sbjct: 1382 tctggtggagttgctgtggttaaggttggagcatcgaccgaggcagagctagaggaccgc 1441 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || || |||||||||||||| || ||||| || || || ||||| || |||||| Sbjct: 1442 aagctccgcatagaggacgcgaagaatgcgacttttgcagcaatagaggaaggtattgtt 1501 Query: 544 cccggtggtggtgcggcatatgtgcacctatc 575 || || || ||||| |||||||| || ||||| Sbjct: 1502 ccaggaggcggtgcagcatatgttcatctatc 1533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 100 aacaagctcagaggtattattaacgttgcggcgatcaaagccccaagtttcggtgagcgg 159 |||||||| ||||| ||| | || || || || |||||||| || |||| |||||| || Sbjct: 1058 aacaagcttagaggaattttaaatgtggctgcaatcaaagctcctggttttggtgagagg 1117 Query: 160 cggaaggctgtccttcaggatattgccatcgtgacaggtgctgaatacctagcgaaggat 219 || || ||| | |||||||| |||||||| || |||||||||||||| | | | || ||| Sbjct: 1118 cgtaaagctcttcttcaggacattgccattgttacaggtgctgaatatcaatccaaagat 1177 Query: 220 cttggtct 227 |||||||| Sbjct: 1178 cttggtct 1185
>ref|NM_128359.3| Arabidopsis thaliana CPN60A; ATP binding / protein binding AT2G28000 (CPN60A) mRNA, complete cds Length = 2103 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1365 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1424 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1425 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1484 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1485 gctatcgaggaaggcatagttccaggtggtggtgc 1519
>gb|BT008784.1| Arabidopsis thaliana At2g28000 gene, complete cds Length = 1761 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1228 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1287 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1288 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1347 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1348 gctatcgaggaaggcatagttccaggtggtggtgc 1382
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete sequence Length = 94884 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Minus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 32453 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 32394 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 32393 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 32334 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 32333 gctatcgaggaaggcatagttccaggtggtggtgc 32299
>dbj|AK222126.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-94-G01 Length = 1181 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 469 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 528 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 529 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 588 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 589 gctatcgaggaaggcatagttccaggtggtggtgc 623
>gb|U49357.1|ATU49357 Arabidopsis thaliana chaperonin-60 alpha subunit gene, nuclear gene encoding plastid protein, complete cds Length = 4365 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 2620 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 2679 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 2680 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 2739 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 2740 gctatcgaggaaggcatagttccaggtggtggtgc 2774
>emb|BX819680.1|CNS0A9ZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2019 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1294 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1353 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1354 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1413 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1414 gctatcgaggaaggcatagttccaggtggtggtgc 1448
>gb|AY086555.1| Arabidopsis thaliana clone 25773 mRNA, complete sequence Length = 1996 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1305 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1364 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1365 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1424 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1425 gctatcgaggaaggcatagttccaggtggtggtgc 1459
>gb|BT002441.1| Arabidopsis thaliana putative rubisco subunit binding-protein alpha subunit (At2g28000) mRNA, complete cds Length = 2020 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 403 gctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaact 462 |||||||| ||||| ||||| ||||| ||||| || ||||| || || |||||| ||||| Sbjct: 1310 gctgagagaattgcgaagctatctggaggtgttgctgtcattaaagtcggagcagcaact 1369 Query: 463 gagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttcgct 522 || || ||||| ||||||||| |||| || |||||||| || |||||||| || || ||| Sbjct: 1370 gaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgcaacatttgct 1429 Query: 523 gccatcgaggagggcattgttcccggtggtggtgc 557 || |||||||| ||||| ||||| ||||||||||| Sbjct: 1430 gctatcgaggaaggcatagttccaggtggtggtgc 1464
>dbj|AB236859.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C766 Length = 1971 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1197 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1256 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1257 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1316 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1317 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1376 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1377 gctgccattgaggaaggtattgttcctggtgg 1408 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 927 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 986 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 987 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 1046 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 1047 ttgacaggtgc 1057
>dbj|AB236852.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C618 Length = 1443 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 792 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 851 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 852 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 911 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 912 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 971 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 972 gctgccattgaggaaggtattgttcctggtgg 1003 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 522 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 581 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 582 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 641 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 642 ttgacaggtgc 652
>dbj|AB236850.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C580 Length = 1986 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1219 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1278 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1279 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1338 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1339 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1398 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1399 gctgccattgaggaaggtattgttcctggtgg 1430 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 949 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 1008 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 1009 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 1068 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 1069 ttgacaggtgc 1079
>dbj|AB236844.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C447 Length = 1999 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1215 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1274 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1275 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1334 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1335 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1394 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1395 gctgccattgaggaaggtattgttcctggtgg 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 945 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 1004 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 1005 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 1064 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 1065 ttgacaggtgc 1075
>dbj|AB236783.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1772 Length = 2038 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1207 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1266 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1267 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1326 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1327 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1386 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1387 gctgccattgaggaaggtattgttcctggtgg 1418 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 937 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 996 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 997 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 1056 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 1057 ttgacaggtgc 1067
>dbj|AB236779.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1724 Length = 1982 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1199 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1258 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1259 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1318 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1319 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1378 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1379 gctgccattgaggaaggtattgttcctggtgg 1410 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 929 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 988 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 989 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 1048 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 1049 ttgacaggtgc 1059
>dbj|AB236775.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C1598 Length = 2018 Score = 95.6 bits (48), Expect = 2e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||| ||||| || ||||| ||| | |||||||| || || | ||||||||||||||| Sbjct: 1143 agggtggcacaactgaagaaagagttgtctgaaacagactcagtttatgattctgagaaa 1202 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 |||||||||||||||| || | |||||||| || || |||||||||||||| || | Sbjct: 1203 ctggctgagaggattgctaaattgtctggtggagttgcagtcatcaaggttggtgctgct 1262 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1263 acagagaccgaacttgaggatcgtaagctccgaattgaggatgccaagaatgcaactttt 1322 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 |||||||| ||||| || |||||||| ||||| Sbjct: 1323 gctgccattgaggaaggtattgttcctggtgg 1354 Score = 54.0 bits (27), Expect = 6e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 ||||||||||||||||| || |||||||| || ||||| | ||||| |||| ||||| Sbjct: 873 actggtgaagctttggctacccttgttgtgaataagctacgtggtatccttaatgttgca 932 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| ||| | || |||||| | || ||||| ||||||| || ||||| || Sbjct: 933 gccatcaaagctccaggctttggtgagagacgaaaggccctccttcaagacattgctata 992 Query: 190 gtgacaggtgc 200 |||||||||| Sbjct: 993 ttgacaggtgc 1003
>gb|AF030515.1|AF030515 Canavalia lineata chaperonin 60 alpha subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2040 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcg 129 |||||||| |||||||| || |||||||| || ||||| | ||||| |||| || || Sbjct: 965 actggtgaggctttggctacccttgttgtgaataagctgcgcggtatccttaatgtagct 1024 Query: 130 gcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatc 189 || |||||||| || || || ||||||||||| |||||||||||||| ||||||||||| Sbjct: 1025 gccatcaaagctcctagctttggtgagcggcgaaaggctgtccttcaagatattgccata 1084 Query: 190 gtgacaggtgctga 203 ||||||||||||| Sbjct: 1085 ttgacaggtgctga 1098
>ref|XM_470503.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1998 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Plus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 1194 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 1253 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 1254 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 1313 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 1314 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 1373 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 1374 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 1433 Query: 544 cccggtggtggtgcggcatatgtgcacct 572 || || ||||||||||| ||||| ||||| Sbjct: 1434 cctggaggtggtgcggcctatgttcacct 1462 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 71 ctggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcgg 130 |||| ||||||||||| ||| | ||||| |||||||| ||||| ||| | || || || | Sbjct: 961 ctggcgaagctttggcaactttagttgtcaacaagcttagaggaattctcaatgtagctg 1020 Query: 131 cgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcg 190 |||| ||||| || | || ||||| |||| |||||| | |||||||| || ||||||| Sbjct: 1021 cgattaaagcacctggctttggtgaaaggcgtaaggctcttcttcaggacatcgccatcg 1080 Query: 191 tgacaggtgctgaat 205 | ||||||||||||| Sbjct: 1081 ttacaggtgctgaat 1095 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 619 gagcgccttggtgctgacatcattca 644 ||||||||||||||||| |||||||| Sbjct: 1509 gagcgccttggtgctgatatcattca 1534
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Minus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 35978530 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 35978471 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 35978470 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 35978411 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 35978410 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 35978351 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 35978350 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 35978291 Query: 544 cccggtggtggtgcggcatatgtgcacct 572 || || ||||||||||| ||||| ||||| Sbjct: 35978290 cctggaggtggtgcggcctatgttcacct 35978262 Score = 48.1 bits (24), Expect = 0.036 Identities = 102/128 (79%) Strand = Plus / Minus Query: 71 ctggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcgg 130 |||| ||||||||||| ||| | ||||| |||||||| ||||| ||| | || || || | Sbjct: 35979314 ctggcgaagctttggcaactttagttgtcaacaagcttagaggaattctcaatgtagctg 35979255 Query: 131 cgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcg 190 |||| ||||| || | || ||||| |||| |||||| | |||||||| || ||||||| Sbjct: 35979254 cgattaaagcacctggctttggtgaaaggcgtaaggctcttcttcaggacatcgccatcg 35979195 Query: 191 tgacaggt 198 | |||||| Sbjct: 35979194 ttacaggt 35979187 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 619 gagcgccttggtgctgacatcattca 644 ||||||||||||||||| |||||||| Sbjct: 35978215 gagcgccttggtgctgatatcattca 35978190
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Minus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 40041 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 39982 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 39981 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 39922 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 39921 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 39862 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 39861 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 39802 Query: 544 cccggtggtggtgcggcatatgtgcacct 572 || || ||||||||||| ||||| ||||| Sbjct: 39801 cctggaggtggtgcggcctatgttcacct 39773 Score = 48.1 bits (24), Expect = 0.036 Identities = 102/128 (79%) Strand = Plus / Minus Query: 71 ctggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcgg 130 |||| ||||||||||| ||| | ||||| |||||||| ||||| ||| | || || || | Sbjct: 40825 ctggcgaagctttggcaactttagttgtcaacaagcttagaggaattctcaatgtagctg 40766 Query: 131 cgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcg 190 |||| ||||| || | || ||||| |||| |||||| | |||||||| || ||||||| Sbjct: 40765 cgattaaagcacctggctttggtgaaaggcgtaaggctcttcttcaggacatcgccatcg 40706 Query: 191 tgacaggt 198 | |||||| Sbjct: 40705 ttacaggt 40698 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 619 gagcgccttggtgctgacatcattca 644 ||||||||||||||||| |||||||| Sbjct: 39726 gagcgccttggtgctgatatcattca 39701
>dbj|AK061901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H05, full insert sequence Length = 1107 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Plus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 303 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 362 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 363 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 422 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 423 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 482 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 483 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 542 Query: 544 cccggtggtggtgcggcatatgtgcacct 572 || || ||||||||||| ||||| ||||| Sbjct: 543 cctggaggtggtgcggcctatgttcacct 571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 71 ctggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcgg 130 |||| ||||||||||| ||| | ||||| |||||||| ||||| ||| | || || || | Sbjct: 70 ctggcgaagctttggcaactttagttgtcaacaagcttagaggaattctcaatgtagctg 129 Query: 131 cgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcg 190 |||| ||||| || | || ||||| |||| |||||| | |||||||| || ||||||| Sbjct: 130 cgattaaagcacctggctttggtgaaaggcgtaaggctcttcttcaggacatcgccatcg 189 Query: 191 tgacaggtgctgaat 205 | ||||||||||||| Sbjct: 190 ttacaggtgctgaat 204 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 619 gagcgccttggtgctgacatcattca 644 ||||||||||||||||| |||||||| Sbjct: 618 gagcgccttggtgctgatatcattca 643
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Minus Query: 304 atagcagatgcagctagcaaagacgagatccaggcgagggttgcacagctaaagaaggag 363 |||||||||| || | |||||| ||||||||||| || |||||||||| |||| ||| Sbjct: 36068604 atagcagatgttgccaccaaagatgagatccaggcaagaattgcacagctgaagagagag 36068545 Query: 364 ctttctgaaactgattccatctatgattctgagaaattggctgagaggattgccaagctt 423 |||||| | || || || ||||| |||||||| ||||||||||| || || |||||| Sbjct: 36068544 ctttctcagacagactcagcatatgactctgagaagttggctgagagaatcgcaaagctt 36068485 Query: 424 tctggtggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgt 483 ||||| || || || || || ||||| ||||| |||| ||||||||||| ||||| || Sbjct: 36068484 tctggcggagttgcggttataaaggtaggagctgcaaccgagacagagcttgaggatcgc 36068425 Query: 484 cagctgcggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgtt 543 |||| || |||||||| || ||||| || || || ||||| || ||||| || || || Sbjct: 36068424 aagcttcgtatcgaggatgccaagaatgcaacatttgctgctattgaggaaggtatagta 36068365 Query: 544 cccggtggtggtgcggcatatgtgcacct 572 || || ||||||||||| ||||| ||||| Sbjct: 36068364 cctggaggtggtgcggcctatgttcacct 36068336 Score = 48.1 bits (24), Expect = 0.036 Identities = 102/128 (79%) Strand = Plus / Minus Query: 71 ctggtgaagctttggcgactcttgttgttaacaagctcagaggtattattaacgttgcgg 130 |||| ||||||||||| ||| | ||||| |||||||| ||||| ||| | || || || | Sbjct: 36069388 ctggcgaagctttggcaactttagttgtcaacaagcttagaggaattctcaatgtagctg 36069329 Query: 131 cgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcaggatattgccatcg 190 |||| ||||| || | || ||||| |||| |||||| | |||||||| || ||||||| Sbjct: 36069328 cgattaaagcacctggctttggtgaaaggcgtaaggctcttcttcaggacatcgccatcg 36069269 Query: 191 tgacaggt 198 | |||||| Sbjct: 36069268 ttacaggt 36069261 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 619 gagcgccttggtgctgacatcattca 644 ||||||||||||||||| |||||||| Sbjct: 36068289 gagcgccttggtgctgatatcattca 36068264
>gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence Length = 2098 Score = 81.8 bits (41), Expect = 3e-12 Identities = 158/197 (80%) Strand = Plus / Plus Query: 394 gagaaattggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttgga 453 |||||| | |||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1291 gagaaacttgctgagagaattgccaagctttctgggggtgtcgccgtcattaaggttgga 1350 Query: 454 gcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgcc 513 || |||| ||| | ||||| || ||||| |||| || || || || || ||||| || Sbjct: 1351 gctgcaacagaggccgagcttgaagaccgcaagcttcgtattgaagatgcaaagaatgca 1410 Query: 514 actttcgctgccatcgaggagggcattgttcccggtggtggtgcggcatatgtgcaccta 573 ||||| ||||| || || ||||| || || || ||||||||||| || | ||| || || Sbjct: 1411 acttttgctgcaattgaagagggaatagtacctggtggtggtgctgcttttgttcattta 1470 Query: 574 tctacctatgtccctgc 590 || || ||||||||||| Sbjct: 1471 tcaacttatgtccctgc 1487 Score = 46.1 bits (23), Expect = 0.14 Identities = 119/151 (78%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagctttggcgactcttgttgttaacaagctcagaggtatt 117 |||||||| || || || |||||| |||| ||||||||||| |||||| | ||||||| Sbjct: 955 gccgaggatatcaccggggaagctctggccactcttgttgtgaacaagttgcgaggtata 1014 Query: 118 attaacgttgcggcgatcaaagccccaagtttcggtgagcggcggaaggctgtccttcag 177 | || ||||| || |||||||| || | || ||||| || | |||||| | || || Sbjct: 1015 ctgaatgttgctgccatcaaagctcctggatttggtgaaaggagaaaggctcttctgcaa 1074 Query: 178 gatattgccatcgtgacaggtgctgaatacc 208 ||||||||||| |||||||| ||||| |||| Sbjct: 1075 gatattgccattgtgacaggagctgagtacc 1105
>dbj|AK222099.1| Arabidopsis thaliana mRNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: RAFL22-88-A01 Length = 645 Score = 81.8 bits (41), Expect = 3e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 453 agcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgc 512 |||| ||||||| || ||||| ||||||||| |||| || |||||||| || |||||||| Sbjct: 6 agcagcaactgaaactgagcttgaggaccgtaagcttcgtatcgaggatgcaaagaacgc 65 Query: 513 cactttcgctgccatcgaggagggcattgttcccggtggtggtgc 557 || || ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 66 aacatttgctgctatcgaggaaggcatagttccaggtggtggtgc 110
>gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacpn60) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1977 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaaggagctttctgaaactgattccatctatgattctgagaaa 399 ||||||||||| |||||||| ||| | ||||| || || || || ||||||||||||||| Sbjct: 1198 agggttgcacaactaaagaaagagttgtctgagacagactcaatttatgattctgagaaa 1257 Query: 400 ttggctgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaaca 459 | || ||||| ||||| ||| | |||||||| || || ||||||||||| || || | Sbjct: 1258 ctcgccgagagaattgctaagttgtctggtggagttgctgtcatcaaggtcggtgctgcc 1317 Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 || ||||| || || ||||| ||| |||| || || ||||| || ||||| || ||||| Sbjct: 1318 acagagaccgaactggaggatcgtaagctccgtattgaggatgccaagaatgcaactttt 1377 Query: 520 gctgccatcgaggagggcattgttcccggtgg 551 || ||||| ||||| || |||||||| ||||| Sbjct: 1378 gccgccattgaggaaggtattgttcctggtgg 1409 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 70 actggtgaagctttggcgactcttgttgttaacaagct 107 |||||||| ||||||||||| |||||||| || ||||| Sbjct: 928 actggtgaggctttggcgacccttgttgtcaataagct 965
>gb|L27472.1|CRECPN1B Chlamydomonas reinhardtii chaperonin alpha-like subunit, complete cds Length = 2420 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 430 ggtgtggccgtcatcaaggttggagcaacaactgagacagagctcgaggaccgtcagctg 489 |||||||||||||||||||| || || | || ||| | ||||| |||||||| ||||| Sbjct: 1227 ggtgtggccgtcatcaaggtgggcgccgccacggaggccgagctggaggaccgcaagctg 1286 Query: 490 cggatcgaggacgcgaagaacgccactttcgctgccatcgaggagggcattgttcccgg 548 || || |||||||| ||||||||||| ||||| ||| | ||||||||||| || ||||| Sbjct: 1287 cgcattgaggacgccaagaacgccaccttcgccgccgtggaggagggcatcgtgcccgg 1345
>gb|M35599.1|BNA60CPNA B.napus plastid 60-kDa chaperonin-60 alpha-polypeptide (cpn-60 alpha) mRNA, 3' end Length = 1789 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 460 actgagacagagctcgaggaccgtcagctgcggatcgaggacgcgaagaacgccactttc 519 |||||||| ||||||||||||||| |||| || |||||||||||||||||||| || || Sbjct: 1167 actgagactgagctcgaggaccgtaagcttcgtatcgaggacgcgaagaacgctacattt 1226 Query: 520 gctgccatcga 530 ||||| ||||| Sbjct: 1227 gctgcaatcga 1237
>emb|X07852.1|RCRSBA Castor-bean mRNA for Rubisco subunit binding-protein alpha subunit Length = 1488 Score = 60.0 bits (30), Expect = 9e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 385 tatgattctgagaaattggctgagaggattgccaagctttctggtggtgtggccgtcatc 444 ||||| || |||||| ||||||| || ||||| || | || ||||| || || |||||| Sbjct: 1040 tatgactccgagaaactggctgaaagaattgctaaattgtccggtggggttgctgtcatc 1099 Query: 445 aaggttggagcaacaactgagacagagctcgaggaccgtcagctgcggatcgaggacgcg 504 || || ||||| |||| ||||| ||||| || |||||| | || || || ||||| || Sbjct: 1100 aaagtgggagctgcaacggagactgagcttgaagaccgtaaactccgaattgaggatgcc 1159 Query: 505 aagaacgccactttcgctgccatcgaggagggcattgttcccggtggtggtgcggcat 562 |||||||| || || ||||| || ||||| |||||||| || ||||||||||| |||| Sbjct: 1160 aagaacgctacatttgctgcaatagaggaaggcattgtccctggtggtggtgctgcat 1217
>gb|DQ295240.1| Uncultured marine bacterium Ant29B7, partial genomic sequence Length = 40351 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 520 gctgccatcgaggagggcattgttcccggtggtggtg 556 ||||||||||||||||| ||||||||||| ||||||| Sbjct: 26655 gctgccatcgaggagggtattgttcccggcggtggtg 26691
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1034 gaagctttagcgactcttgttgtaaacaagcttagaggta 1073 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1363 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1422 Query: 465 gacaga 470 |||||| Sbjct: 1423 gacaga 1428
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1061 gaagctttagcgactcttgttgtaaacaagcttagaggta 1100 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1390 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1449 Query: 465 gacaga 470 |||||| Sbjct: 1450 gacaga 1455
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 53651 gaagctttagcgactcttgttgtaaacaagcttagaggta 53690
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 931 gaagctttagcgactcttgttgtaaacaagcttagaggta 970 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1260 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1319 Query: 465 gacaga 470 |||||| Sbjct: 1320 gacaga 1325
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1053 gaagctttagcgactcttgttgtaaacaagcttagaggta 1092 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1382 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1441 Query: 465 gacaga 470 |||||| Sbjct: 1442 gacaga 1447
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggta 115 |||||||| |||||||||||||| |||||||| ||||||| Sbjct: 1016 gaagctttagcgactcttgttgtaaacaagcttagaggta 1055 Score = 44.1 bits (22), Expect = 0.56 Identities = 55/66 (83%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || ||||||||||| |||||| Sbjct: 1345 tgagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactga 1404 Query: 465 gacaga 470 |||||| Sbjct: 1405 gacaga 1410
>ref|XM_814415.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.290) partial mRNA Length = 1680 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 530 aggagggcattgttcccggtggtggtg 556 ||||||||||||||||||||||||||| Sbjct: 1253 aggagggcattgttcccggtggtggtg 1279
>emb|X67473.1|TCHSP60 T.cruzi hsp60 gene Length = 2100 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 530 aggagggcattgttcccggtggtggtg 556 ||||||||||||||||||||||||||| Sbjct: 1660 aggagggcattgttcccggtggtggtg 1686
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 409 aggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactgagaca 468 |||||||| || || |||||||||||||| || || ||||||| ||| |||||||||| Sbjct: 1367 aggattgcaaaactgtctggtggtgtggctgtaatacaggttggtgcacaaactgagaca 1426 Query: 469 gagctcgagga 479 |||||| |||| Sbjct: 1427 gagctcaagga 1437
>gb|AF014832.1|AF014832 Bartonella doshiae 60 kDa heat shock protein (groEL) gene, partial cds Length = 1461 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaagct 107 |||||||||||||| || ||||||||||||||||| Sbjct: 667 ggtgaagctttggcaacacttgttgttaacaagct 701
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagaggt 114 ||||||||||||||||||||||| || ||||| |||||| Sbjct: 965 gaagctttggcgactcttgttgtcaataagcttagaggt 1003
>gb|L08791.1|TRBHSP60A Trypanosoma cruzi heat shock protein 60 mRNA, complete cds and flanking regions Length = 2020 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 530 aggagggcattgttcccggtggtggtg 556 ||||||||||||||||||||||||||| Sbjct: 1398 aggagggcattgttcccggtggtggtg 1424
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 412 attgccaagctttctggtggtgtggccgtcatcaaggttgg 452 ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 25709 attgccaagctggccggtggtgtagccgtcatcaaggttgg 25749
>emb|AL113347.1|CNS01ASR Botrytis cinerea strain T4 cDNA library Length = 660 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 359 ttgctaagctttctggtggtgtagccgttatcaaggt 395
>emb|AL112456.1|CNS01A40 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 342 ttgctaagctttctggtggtgtagccgttatcaaggt 378
>emb|AL111827.1|CNS019MJ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| ||||||||||||||||| ||||| |||||||| Sbjct: 151 ttgctaagctttctggtggtgtagccgttatcaaggt 187
>gb|AY940083.1| Zymomonas mobilis subsp. francensis strain AN0101 heat shock protein Hsp60 (groEL) gene, partial cds Length = 592 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctc 108 ||||||||||| ||||| ||||||||||||||| Sbjct: 523 gaagctttggcaactctggttgttaacaagctc 555
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1352 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1403
>ref|XM_386422.1| Gibberella zeae PH-1 chromosome 3 HS60_AJECA Heat shock protein 60, mitochondrial precursor (Antigen HIS-62) (FG06246.1) partial mRNA; nuclear gene for mitochondrial product Length = 1764 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggttgg 452 |||||||||| ||||| ||||| || |||||||||||||| Sbjct: 1202 ttgccaagctctctggcggtgttgctgtcatcaaggttgg 1241
>ref|XM_504920.1| Yarrowia lipolytica CLIB122, YALI0F02805g predicted mRNA Length = 1725 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggttggag 454 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 1165 gccaagctgtctggcggtgttgccgtcatcaaggtcggag 1204
>gb|AF449763.1| Bartonella sp. SV06uk heat shock protein Hsp 60 (groEL) gene, partial cds Length = 1206 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 ||||||||||||||||| || ||||||||||| Sbjct: 502 ggtgaagctttggcgacgctcgttgttaacaa 533
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1352 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1403
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 1020 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 1071
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||||||||| |||||| |||||||||| || ||||| |||| |||||| Sbjct: 346 tgagaggattgcaaagcttgctggtggtgttgcagtcattcaggtgggagca 397
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggttggag 454 |||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 405669 gccaagctgtctggcggtgttgccgtcatcaaggtcggag 405708
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gcgactcttgttgttaacaagct 107 ||||||||||||||||||||||| Sbjct: 1019 gcgactcttgttgttaacaagct 1041 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 1380 aggttggagcacaaactgagacagagct 1407
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gcgactcttgttgttaacaagct 107 ||||||||||||||||||||||| Sbjct: 1059 gcgactcttgttgttaacaagct 1081 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 1420 aggttggagcacaaactgagacagagct 1447
>ref|XM_951407.1| Neurospora crassa OR74A hypothetical protein ( probable heat-shock protein hsp60 [imported] - Neurospora crassa OR74A emb|CAB91379.2| (AL355930) probabl> (NCU01589.1) partial mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggt 449 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1180 gccaagctctctggcggtgttgccgtcatcaaggt 1214
>ref|XM_328027.1| Neurospora crassa OR74A hypothetical protein ( probable heat-shock protein hsp60 [imported] - Neurospora crassa OR74A emb|CAB91379.2| (AL355930) probable hea> (NCU01589.1) partial mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggt 449 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1180 gccaagctctctggcggtgttgccgtcatcaaggt 1214
>ref|XM_756885.1| Ustilago maydis 521 hypothetical protein (UM05831.1) partial mRNA Length = 1749 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggt 449 |||||||| ||||| ||||| |||||||||||||| Sbjct: 1195 gccaagctctctggcggtgtagccgtcatcaaggt 1229
>ref|XM_814413.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.280) partial mRNA Length = 1683 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 530 aggagggcattgttcccggtggtggtg 556 ||||||| ||||||||||||||||||| Sbjct: 1247 aggagggtattgttcccggtggtggtg 1273
>ref|XM_814417.1| Trypanosoma cruzi strain CL Brener chaperonin HSP60, mitochondrial precursor (Tc00.1047053507641.300) partial mRNA Length = 787 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 530 aggagggcattgttcccggtggtggtg 556 ||||||| ||||||||||||||||||| Sbjct: 351 aggagggtattgttcccggtggtggtg 377
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 491 ggatcgaggacgcgaagaacgcc 513 ||||||||||||||||||||||| Sbjct: 47694 ggatcgaggacgcgaagaacgcc 47672
>emb|AL355930.2|NCB2O8 Neurospora crassa DNA linkage group II BAC clone B2O8 Length = 162671 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 415 gccaagctttctggtggtgtggccgtcatcaaggt 449 |||||||| ||||| ||||| |||||||||||||| Sbjct: 98037 gccaagctctctggcggtgttgccgtcatcaaggt 98071
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcat 443 |||||||||||| |||||| |||||||||| || ||||| Sbjct: 811899 tgagaggattgcaaagcttgctggtggtgttgcagtcat 811861
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gcgactcttgttgttaacaagct 107 ||||||||||||||||||||||| Sbjct: 413 gcgactcttgttgttaacaagct 435 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 774 aggttggagcacaaactgagacagagct 801
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcat 443 |||||||||||| |||||| |||||||||| || ||||| Sbjct: 95033 tgagaggattgcaaagcttgctggtggtgttgcagtcat 94995
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 gcgactcttgttgttaacaagct 107 ||||||||||||||||||||||| Sbjct: 847 gcgactcttgttgttaacaagct 869 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 1472 aggttggagcacaaactgagacagagct 1499
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 79 gctttggcgactcttgttgttaacaagctcagagg 113 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 997 gctttagcgacccttgttgttaacaagcttagagg 1031
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 44.1 bits (22), Expect = 0.56 Identities = 58/70 (82%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagcaacaactga 464 |||||| ||||| ||||| |||||||| || || || || |||||||||| |||||| Sbjct: 1248 tgagagaattgcgaagctctctggtggagttgctgtaattcaggttggagctcaaactga 1307 Query: 465 gacagagctc 474 |||||||||| Sbjct: 1308 gacagagctc 1317 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 actcttgttgttaacaagctcagagg 113 |||||||||||||||||||| ||||| Sbjct: 931 actcttgttgttaacaagcttagagg 956
>gb|DQ106180.1| Uncultured bacterium clone ce1_cl37_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaacaagctcagagg 113 ||||||||| | |||||| ||||||| ||||||||||| Sbjct: 493 gaagctttgtcaactcttattgttaataagctcagagg 530
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 415 gccaagctttctggtggtgtggccgt 440 |||||||||||||||||||| ||||| Sbjct: 112807 gccaagctttctggtggtgttgccgt 112782
>emb|AL356312.12| Human DNA sequence from clone RP11-172A19 on chromosome 13, complete sequence Length = 60683 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 acagctaaagaaggagctttct 369 |||||||||||||||||||||| Sbjct: 30774 acagctaaagaaggagctttct 30795
>emb|X95992.1|EGHSP60GN E.gracilis mRNA for heat shock protein 60 Length = 1946 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 gagggcattgttcccggtggtggtgc 557 |||||||| ||||||||||||||||| Sbjct: 1272 gagggcatcgttcccggtggtggtgc 1297
>gb|AF240565.2|AF240565 Bifidobacterium denticolens heat shock protein 60 (hsp60) gene, complete cds Length = 2033 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 427 ggtggtgtggccgtcatcaaggttgg 452 |||||||| ||||||||||||||||| Sbjct: 1310 ggtggtgtcgccgtcatcaaggttgg 1335
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 actcttgttgttaacaagctcagagg 113 |||||||||||||||||||| ||||| Sbjct: 44956 actcttgttgttaacaagcttagagg 44981
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| |||||||||| || | |||||||| |||||||||||||| Sbjct: 1680251 tgagcggattgccaaactggccggtggtgttgccgtcatcaaggt 1680295
>gb|BT013632.1| Lycopersicon esculentum clone 132434F, mRNA sequence Length = 2127 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 gagggcattgttcccggtggtggtg 556 |||||||||||||| |||||||||| Sbjct: 1411 gagggcattgttccaggtggtggtg 1435
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 526 atcgaggagggcattgttcccggtggtgg 554 ||||| || |||||||||||||||||||| Sbjct: 29681 atcgaagaaggcattgttcccggtggtgg 29709
>gb|AY121367.1| Streptococcus dysgalactiae strain HKU 7 chaperonin GroEL gene, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggt 449 ||||||||||||| ||||||||||| Sbjct: 1027 ctggtggtgtggctgtcatcaaggt 1051
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 attgccaagctttctggtggtgtggccgt 440 |||||||| ||||||||||| |||||||| Sbjct: 1811888 attgccaaactttctggtggcgtggccgt 1811860
>dbj|AK047518.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082I23 product:unclassifiable, full insert sequence Length = 3307 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 caaagaaacaattgaagacca 614 ||||||||||||||||||||| Sbjct: 2508 caaagaaacaattgaagacca 2488
>emb|AL114749.1|CNS01BVP Botrytis cinerea strain T4 cDNA library Length = 780 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| ||||||||||||||||| |||| |||||||| Sbjct: 585 ttgctaagctttctggtggtgtaaccgttatcaaggt 621
>emb|AL112107.1|CNS019UB Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 413 ttgccaagctttctggtggtgtggccgtcatcaaggt 449 |||| ||||||||||||||||| |||| |||||||| Sbjct: 337 ttgctaagctttctggtggtgtagccgatatcaaggt 373
>gb|AF239164.1| Rhizobium leguminosarum cpn-3 (groE) operon, complete sequence Length = 2947 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 tggcgactcttgttgttaacaagct 107 ||||||| ||||||||||||||||| Sbjct: 2055 tggcgacgcttgttgttaacaagct 2079
>gb|AY121366.1| Streptococcus dysgalactiae subsp. equisimilis strain CIP 55-123 chaperonin GroEL gene, partial cds Length = 1422 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggt 449 ||||||||||||| ||||||||||| Sbjct: 1034 ctggtggtgtggctgtcatcaaggt 1058
>gb|AY121365.1| Streptococcus dysgalactiae subsp. equisimilis strain ATCC 12394 chaperonin GroEL gene, partial cds Length = 1421 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggt 449 ||||||||||||| ||||||||||| Sbjct: 1042 ctggtggtgtggctgtcatcaaggt 1066
>gb|AY121364.1| Streptococcus dysgalactiae subsp. equisimilis strain ATCC 35666 chaperonin GroEL gene, partial cds Length = 1421 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggt 449 ||||||||||||| ||||||||||| Sbjct: 1033 ctggtggtgtggctgtcatcaaggt 1057
>gb|AY121363.1| Streptococcus dysgalactiae subsp. dysgalactiae strain ATCC 43078 chaperonin GroEL gene, partial cds Length = 1384 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggt 449 ||||||||||||| ||||||||||| Sbjct: 1009 ctggtggtgtggctgtcatcaaggt 1033
>gb|AF014835.1|AF014835 Bartonella vinsonii 60 kDa heat shock protein (groEL) gene, partial cds Length = 1206 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaag 105 |||||||||||||| || || |||||||||||| Sbjct: 502 ggtgaagctttggcaacgctcgttgttaacaag 534
>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence Length = 226125 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 caaagaaacaattgaagacca 614 ||||||||||||||||||||| Sbjct: 150259 caaagaaacaattgaagacca 150239
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 attgccaagctttctggtggtgtggccgt 440 |||||||| ||||||||||| |||||||| Sbjct: 1228024 attgccaaactttctggtggcgtggccgt 1227996
>gb|AY780524.1| Ictalurus punctatus heat shock protein 60-like mRNA, partial sequence Length = 186 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 527 tcgaggagggcattgttcccggtggtgg 554 |||| ||||||||||||||||| ||||| Sbjct: 32 tcgaagagggcattgttcccggaggtgg 59
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1346 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1397
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1366 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1417
>gb|AC137713.8| Mus musculus chromosome 15, clone RP24-468P6, complete sequence Length = 155341 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 acctatctacctatgtccct 588 |||||||||||||||||||| Sbjct: 126383 acctatctacctatgtccct 126402
>gb|AY515128.1| Bartonella rattimassiliensis strain 16115 GroEL gene, partial cds Length = 1461 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||||||||| || ||||| |||||||| Sbjct: 587 ggtgaagctttggcaacgcttgtggttaacaa 618
>gb|AY515127.1| Bartonella rattimassiliensis strain 15908 GroEL gene, partial cds Length = 1448 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||||||||| || ||||| |||||||| Sbjct: 587 ggtgaagctttggcaacgcttgtggttaacaa 618
>gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, complete sequence Length = 181495 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gaaaatcacaattcatcaga 289 |||||||||||||||||||| Sbjct: 45600 gaaaatcacaattcatcaga 45581
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgcggatcgaggacgcgaag 507 |||||||||||||||||||| Sbjct: 3161851 tgcggatcgaggacgcgaag 3161870
>gb|BT013144.1| Lycopersicon esculentum clone 134139R, mRNA sequence Length = 2052 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 514 actttcgctgccatcgaggagggcattgttcccggtggtggtgc 557 ||||||||||| || || ||||| ||||| || ||||||||||| Sbjct: 1423 actttcgctgcaattgaagagggaattgtacctggtggtggtgc 1466
>gb|DQ106298.1| Uncultured bacterium clone ic0_cl13_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagct 81 ||||| |||||||||||||||||| Sbjct: 475 gccgatgacattactggtgaagct 498
>gb|DQ106229.1| Uncultured bacterium clone dl0_cl11_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagct 81 ||||| |||||||||||||||||| Sbjct: 475 gccgatgacattactggtgaagct 498
>gb|DQ106200.1| Uncultured bacterium clone ce1_cl52_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagct 81 ||||| |||||||||||||||||| Sbjct: 475 gccgatgacattactggtgaagct 498
>gb|DQ106087.1| Uncultured bacterium clone ce0_cl38_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagct 81 ||||| |||||||||||||||||| Sbjct: 475 gccgatgacattactggtgaagct 498
>ref|XM_750170.1| Aspergillus fumigatus Af293 antigenic mitochondrial protein HSP60 (Afu2g09290) partial mRNA Length = 1764 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 418 aagctttctggtggtgtggccgtcatcaaggt 449 ||||| ||||| ||||| |||||||||||||| Sbjct: 1213 aagctctctggcggtgttgccgtcatcaaggt 1244
>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence Length = 206192 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ctgattccatctatgattct 393 |||||||||||||||||||| Sbjct: 50010 ctgattccatctatgattct 50029
>ref|XM_846305.1| PREDICTED: Canis familiaris similar to leucyl/cystinyl aminopeptidase isoform 1 (LOC488896), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 tcaaggttggagcaacaactgaga 466 ||||||||||||||| |||||||| Sbjct: 2609 tcaaggttggagcaaaaactgaga 2632
>gb|AY116641.1| Bartonella koehlerae heat shock protein Hsp60 (groEL) gene, partial cds Length = 1188 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaagctc 108 |||||||||||||| || || ||||| ||||||||| Sbjct: 485 ggtgaagctttggcaacgctcgttgtcaacaagctc 520
>emb|AL139390.15| Human DNA sequence from clone RP11-556O15 on chromosome 6p24.1-25.3 Contains part of a novel gene,, complete sequence Length = 102581 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 ccaacttgggacagcaaggaaaat 275 ||||||||||||| |||||||||| Sbjct: 13913 ccaacttgggacaccaaggaaaat 13890
>emb|AL138930.15| Human DNA sequence from clone RP11-528G1 on chromosome 1 Contains the SLAMF6 gene for SLAM family member 6, the CD84 gene for CD84 antigen (leukocyte antigen), a novel gene and the 3' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, complete sequence Length = 175386 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 agggttgcacagctaaagaa 359 |||||||||||||||||||| Sbjct: 57676 agggttgcacagctaaagaa 57695
>gb|AF304016.1| Bartonella vinsonii subsp. arupensis heat shock protein Hsp60 (groEL) gene, partial cds Length = 1356 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||||||||| || || ||||||||||| Sbjct: 580 ggtgaagctttggcaacactcgttgttaacaa 611
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 18 aggttggagcacaaactgagacagagct 45
>gb|AY123651.1| Lactobacillus vaginalis strain ATCC 49540 Cpn60 (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagct 81 ||||| |||||||||||||||||| Sbjct: 475 gccgatgacattactggtgaagct 498
>gb|AY332863.1| Yersinia bercovieri strain WS 39/98 60 kDa heat shock protein (HSP60) gene, partial cds Length = 517 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 203 gaagcgttggcgactctggttgttaaca 230
>gb|AY332862.1| Yersinia bercovieri strain WS 27/96 60 kDa heat shock protein (HSP60) gene, partial cds Length = 498 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 184 gaagcgttggcgactctggttgttaaca 211
>gb|AY332861.1| Yersinia bercovieri strain WS 19/96 60 kDa heat shock protein (HSP60) gene, partial cds Length = 557 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 183 gaagcgttggcgactctggttgttaaca 210
>gb|AY332860.1| Yersinia bercovieri strain WE 82/87 60 kDa heat shock protein (HSP60) gene, partial cds Length = 495 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 195 gaagcgttggcgactctggttgttaaca 222
>gb|AY332859.1| Yersinia bercovieri strain WA 17/96 60 kDa heat shock protein (HSP60) gene, partial cds Length = 528 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 202 gaagcgttggcgactctggttgttaaca 229
>gb|AY332858.1| Yersinia bercovieri strain ATCC 43970 60 kDa heat shock protein (HSP60) gene, partial cds Length = 513 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 180 gaagcgttggcgactctggttgttaaca 207
>gb|AY332857.1| Yersinia bercovieri strain 6519 60 kDa heat shock protein (HSP60) gene, partial cds Length = 426 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 gaagctttggcgactcttgttgttaaca 103 ||||| ||||||||||| |||||||||| Sbjct: 194 gaagcgttggcgactctggttgttaaca 221
>gb|AY837291.1| Vibrio sp. 12F04 heat shock protein 60 (hsp60) gene, partial cds Length = 541 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||| ||||||||||| ||||| ||||| Sbjct: 501 ggtgaagcgttggcgactctggttgtgaacaa 532
>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209766 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctgattccatctatgattct 393 |||||||||||||||||||| Sbjct: 17742 ctgattccatctatgattct 17723
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 aggttggagcaacaactgagacagagct 473 ||||||||||| ||||||||||||||| Sbjct: 241 aggttggagcacaaactgagacagagct 268
>gb|AC008974.7|AC008974 Homo sapiens chromosome 19 clone LLNLF-116A8, complete sequence Length = 38000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 aggatcttggtctgttggtt 234 |||||||||||||||||||| Sbjct: 24212 aggatcttggtctgttggtt 24193
>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence Length = 134793 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 aggatcttggtctgttggtt 234 |||||||||||||||||||| Sbjct: 3769 aggatcttggtctgttggtt 3750
>gb|AF215852.1|AF215852 Nicotiana tabacum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1795 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tgaatacctagcgaaggatcttgg 224 |||||||||||| ||||||||||| Sbjct: 355 tgaatacctagctaaggatcttgg 378
>emb|AJ338304.1|HSA338304 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PA22RS Length = 717 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 596 aagaaacaattgaagaccac 615 |||||||||||||||||||| Sbjct: 541 aagaaacaattgaagaccac 522
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 40.1 bits (20), Expect = 8.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 405 tgagaggattgccaagctttctggtggtgtggccgtcatcaaggttggagca 456 |||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct: 1345 tgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagca 1396
>gb|AC157016.3| Mus musculus 10 BAC RP24-505M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168538 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ctgattccatctatgattct 393 |||||||||||||||||||| Sbjct: 13111 ctgattccatctatgattct 13092
>gb|AY940082.1| Zymomonas mobilis subsp. pomaceae strain LMG 5993 heat shock protein Hsp60 (groEL) gene, partial cds Length = 592 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||||||||| || || ||||||||||| Sbjct: 520 ggtgaagctttggcaaccctcgttgttaacaa 551
>gb|AY940081.1| Zymomonas mobilis subsp. pomaceae strain LMG 448 heat shock protein Hsp60 (groEL) gene, partial cds Length = 592 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 ggtgaagctttggcgactcttgttgttaacaa 104 |||||||||||||| || || ||||||||||| Sbjct: 520 ggtgaagctttggcaaccctcgttgttaacaa 551
>gb|AF405420.1| Pediococcus inopinatus clone P37 HSP60 gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 58 gccgaggacattactggtgaagctttggcgactcttgttgttaacaag 105 ||||| || |||||||||||||||||| | || |||||| | |||||| Sbjct: 475 gccgatgatattactggtgaagctttgccaacccttgttttgaacaag 522
>gb|AC005856.1|AC005856 Homo sapiens chromosome 17, clone hRPK.136_H_19, complete sequence Length = 126910 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ctttctgaaactgattccat 383 |||||||||||||||||||| Sbjct: 64873 ctttctgaaactgattccat 64854
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 ctggtggtgtggccgtcatcaaggttgg 452 |||||||||| || |||||||||||||| Sbjct: 503620 ctggtggtgttgctgtcatcaaggttgg 503647
>gb|U57000.1|TVU57000 Trichomonas vaginalis chaperonin 60 (cpn60) mRNA, partial cds Length = 1678 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 520 gctgccatcgaggagggcattgttcccggtggtggt 555 |||||||||||||| ||||| ||| | ||||||||| Sbjct: 1217 gctgccatcgaggaaggcatcgttgctggtggtggt 1252
>gb|AF429661.1| Lactobacillus plantarum strain ATCC 8014 60 kDa heat shock protein (HSP60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gacattactggtgaagcttt 83 |||||||||||||||||||| Sbjct: 481 gacattactggtgaagcttt 500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,627,179 Number of Sequences: 3902068 Number of extensions: 4627179 Number of successful extensions: 82237 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81781 Number of HSP's gapped (non-prelim): 443 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)