ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14l17 |
|---|---|
| Clone Library Name | barley_pub |
>PLCF_PONPY (Q5R6J7) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 33.9 bits (76), Expect = 0.095 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 11/96 (11%) Frame = +2 Query: 116 DLXDISPVLTEAAGAIVDDSFTRCFKXNSXEPWNW-----------NIYLFPLWCLGVVI 262 +L DI + I+DD T+ F E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLI 170 Query: 263 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNK 370 RY G V +L NG+ K Sbjct: 171 RYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFK 206
>PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 33.9 bits (76), Expect = 0.095 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 11/96 (11%) Frame = +2 Query: 116 DLXDISPVLTEAAGAIVDDSFTRCFKXNSXEPWNW-----------NIYLFPLWCLGVVI 262 +L DI + I+DD T+ F E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLI 170 Query: 263 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNK 370 RY G V +L NG+ K Sbjct: 171 RYCFLLPLRIALAFTGISLLVVGTTVVGYLPNGRFK 206
>PLCF_MOUSE (Q8K2C8) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 32.7 bits (73), Expect = 0.21 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 11/96 (11%) Frame = +2 Query: 116 DLXDISPVLTEAAGAIVDDSFTRCFKXNSXEPWNW-----------NIYLFPLWCLGVVI 262 +L DI + I+DD T+ F E WN ++ L LW LGV+I Sbjct: 111 ELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTILWGLGVLI 170 Query: 263 RYGXXXXXXXXXXXXGWMAFFTAFFPVHFLMNGKNK 370 RY G V +L NG+ K Sbjct: 171 RYCFLLPLRIALAFTGIGLLVVGTTMVGYLPNGRFK 206
>ARN2_YEAST (P38724) Siderophore iron transporter ARN2 (Triacetylfusarinine C| transporter 1) (Triacetylfusarinine C permease) Length = 637 Score = 28.9 bits (63), Expect = 3.0 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +2 Query: 131 SPVLTEAAGAIVDDSFTRCFKXNSXEPWNWNI----YLFPLWCLGVVI 262 S + T +G++V+ + N E W+WNI ++FPL C+ +++ Sbjct: 203 SIITTWVSGSVVEAA-------NPLENWSWNIAMWAFIFPLCCIPLIL 243
>PAXI_RAT (Q66H76) Paxillin| Length = 586 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 288 LSGNSSPYLMTTPKHHNGNK*MFQFHGSXEFXLKQRVNESSTMAPAASVSTGEM 127 L G + P + PK NG + + S E L + N + PA +V+ GEM Sbjct: 219 LGGKAGPLMKEKPKR-NGGRGLEDVRPSVESLLDELENSVPSPVPAITVNQGEM 271
>C71B8_ARATH (P58048) Cytochrome P450 71B8 (EC 1.14.-.-)| Length = 506 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +1 Query: 211 MELEHLLVPIMVLGSSHKIWTAVSAKVLNTCTRMDGLLYGLFSRAF 348 M L +VP++V+ S + ++ L TC+R + GLF+R F Sbjct: 65 MLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNF 110
>CLCN3_RAT (P51792) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_RABIT (O18894) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_MOUSE (P51791) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>CLCN3_CAVPO (Q9R279) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 682 SLPAESPRPLKLRSILDMSP 701
>GLNA_STAAW (P0A039) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAU (P0A040) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAS (Q6G9Q4) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAR (Q6GHC6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAN (P99095) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAM (P60890) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>GLNA_STAAC (Q5HGC3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 105 SPCAIXWTSRQCSPRQRVPSS 167 +PC I W+ + SP RVPSS Sbjct: 307 APCYIAWSGKNRSPLIRVPSS 327
>MAG1_SCHPO (Q92383) DNA-3-methyladenine glycosylase 1 (EC 3.2.2.21)| (3-methyladenine DNA glycosidase 1) (3MEA DNA glycosylase 1) Length = 228 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Frame = +2 Query: 5 GVGRWEKMASALDAPNLDDYLPADS------------LPQEPPRTLTLRDLXDISPVLTE 148 G+GRW + + N DD +PAD LP+ P + L+ +P T Sbjct: 146 GIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICAPFRTA 205 Query: 149 AA 154 AA Sbjct: 206 AA 207
>CLCN3_HUMAN (P51790) Chloride channel protein 3 (ClC-3)| Length = 762 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 684 SLPAESPRPLKLRSILDMSP 703
>CLCN3_PONPY (Q5RDJ7) Chloride channel protein 3 (ClC-3)| Length = 801 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 77 SLPQEPPRTLTLRDLXDISP 136 SLP E PR L LR + D+SP Sbjct: 723 SLPAESPRPLKLRSILDMSP 742
>RL17_BUCAI (P57565) 50S ribosomal protein L17| Length = 130 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = +1 Query: 115 RSXGHLASAHRGSGCHRR*FIHTLLQXKFXGAMELEHLLVPIMVLGSSHKIWTAVSAKVL 294 RS HL S + C F H +++ A EL ++ PI+ L KI T +++ Sbjct: 12 RSSTHLNSMLKNMACSL--FTHEVIKTTLSKAKELRRIVEPIITLS---KIDTVSRRRLV 66 Query: 295 NTCTRMDGLLYGLFSRAFP 351 + R + ++ LF + P Sbjct: 67 FSRIRDNAIVAKLFKKLGP 85
>PIGR_RABIT (P01832) Polymeric-immunoglobulin receptor precursor (Poly-Ig| receptor) (PIGR) [Contains: Secretory component] Length = 773 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 Query: 167 RRWHPLPR*ALARCPXDRAG*ESWGVPAGASPRGGNR 57 R+W+PL R CP R E V + P G+R Sbjct: 595 RQWYPLSRKLRTSCPEPRLLAEEVAVQSAEDPASGSR 631
>MRP_RABIT (P35566) MARCKS-related protein (MARCKS-like protein 1) (Macrophage| myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) Length = 198 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -1 Query: 95 GVPAGASPRGGNRLGWARPAXTPSSPSG 12 G AGA+ +GG+ A P PS+PSG Sbjct: 157 GAEAGAACKGGDTEEEAGPPAEPSTPSG 184
>RNC_MYCPN (P75233) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 282 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 161 IVDDSFTRCFKXNSXEPWNWNIY 229 ++D+ F FK + EP NW Y Sbjct: 13 VIDEKFVAFFKSLNIEPQNWQFY 35
>YCR6_YEAST (P25353) Hypothetical protein YCR026C| Length = 742 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 17 WEKMASALDAPNLDDYLPADSLPQEPPRTLTLRDLXDISPVLTEAAGAIVDDSFTRCFKX 196 WE + LD DY+ L + P ++L+D +I+ V +I +D +T Sbjct: 430 WEDL---LDEKLRKDYVSHAYL-EGPMMAISLKDSGNINEVYHNLKTSIDEDKYTVYVNG 485 Query: 197 NSXEPWNWN 223 N + WN+N Sbjct: 486 NFPKEWNFN 494
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = -1 Query: 89 PAGASPRG-GNRLGWARPAXTPSSPSGRRR 3 PAG +PR G R G RPA P P G R Sbjct: 391 PAGGAPRPEGQREGGYRPAGGPPRPGGAPR 420
>VIT_ICHUN (Q91062) Vitellogenin precursor (VTG) [Contains: Lipovitellin LV-1N;| Lipovitellin LV-1C; Lipovitellin LV-2] Length = 1823 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/69 (26%), Positives = 31/69 (44%) Frame = -3 Query: 336 KKAVKKAIHPSTSVKNLSGNSSPYLMTTPKHHNGNK*MFQFHGSXEFXLKQRVNESSTMA 157 K+A KK +S + S +SS +P H G K HG+ + + SS+ + Sbjct: 1167 KRASKKQRGKDSSSSSSSSSSSSDSSKSPHKHGGAKRQHAGHGAPHLGPQSHSSSSSSSS 1226 Query: 156 PAASVSTGE 130 ++S S + Sbjct: 1227 SSSSSSASK 1235
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +2 Query: 23 KMASALDAPNLDDYLPADSLPQEPPRTLTLRD--LXDISPVLTEAAGAIV 166 +++SA +AP + D P P T LRD L + P L+E A A V Sbjct: 117 ELSSAPEAPGTQEGPTCDGTPLPEPGTSELRDPLLMQLRPPLSEPALAFV 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,319,284 Number of Sequences: 219361 Number of extensions: 970093 Number of successful extensions: 2596 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2593 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
