ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14l15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence 355 1e-94
2dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
3dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
4dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
5dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
6dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
7gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal pr... 291 1e-75
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 268 2e-68
9gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 268 2e-68
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
11gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 56 1e-04
12gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 54 5e-04
13dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 50 0.008
14emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 48 0.030
15dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 48 0.030
16gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, comple... 46 0.12
17gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complet... 46 0.12
18emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 o... 44 0.47
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.8
20gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, com... 42 1.8
21emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal protei... 42 1.8
22gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 5... 42 1.8
23gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.8
24gb|AE016753.1| Mus musculus chromosome 10 high-growth region, se... 42 1.8
25dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.8
26gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Can... 42 1.8
27gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulato... 42 1.8
28ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
29ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
30gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL... 40 7.3
31gb|AC005371.1| Homo sapiens chromosome 5, BAC clone 342p15 (LBNL... 40 7.3
32gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, com... 40 7.3
33gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.3
34gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's ... 40 7.3
35gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, com... 40 7.3
36gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 7.3
37gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 7.3
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.3
39gb|CP000088.1| Thermobifida fusca YX, complete genome 40 7.3
40emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon 40 7.3
41emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.3
42gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, comple... 40 7.3
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.3
44gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 7.3
45gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, com... 40 7.3
46gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt] 40 7.3
47gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 7.3
48gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.3
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
50gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, compl... 40 7.3
51gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, co... 40 7.3
52gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 7.3
53dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 7.3
54dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.3
55dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
56dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
57dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
58emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate... 40 7.3
59gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.3
60gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 7.3
61emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on ch... 40 7.3
62gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complet... 40 7.3
63dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sod... 40 7.3 
>gb|BT018226.1| Zea mays clone EL01N0561F09.c mRNA sequence
          Length = 923

 Score =  355 bits (179), Expect = 1e-94
 Identities = 325/372 (87%), Gaps = 4/372 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| ||||| ||||| ||||| |||||||||||| | |||| ||||||| |||
Sbjct: 359 agggaaacaccatcggcatcgcagtcaccctccgcggcaggataatgtacaacttcctgg 418

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct: 419 ataggctcatcaaccttgggctcccaaggaccatggacttcctgggtgtcaaccccaaca 478

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||||||||||||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct: 479 gcttcgacgggcacggcaactacagccttggcctccgtgaccagggcgtgttcccggaga 538

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||||||||| ||||||||||| ||||||||  |||||||||||| |||||
Sbjct: 539 tcccgtacgaggtgggcgggaagaagaacggcatggacgtgtccatcgtcaccagcgcca 598

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||| ||||||||||||   |||||| | |  |||||||||||||| ||| | |||||||
Sbjct: 599 agacggacaacgaggcgttcaggctggtggtcctcctcggcatgccgttctcggagaaca 658

                                                                       
Query: 301 tcaagtctgac---cagttcaagaagaagaggntgaagcgccaccacttcatgagcaagg 357
           ||||| | |||     | ||  |||||||||| ||||||||| ||||||| |||||||||
Sbjct: 659 tcaagaccgacgtggtgatccggaagaagaggttgaagcgcccccacttcctgagcaagg 718

                       
Query: 358 gc-aggggaagg 368
           || |||||||||
Sbjct: 719 gcaaggggaagg 730
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>dbj|AK104137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H07, full
           insert sequence
          Length = 1009

 Score =  299 bits (151), Expect = 5e-78
 Identities = 268/307 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 472 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 531

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 532 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 591

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 592 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 651

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 652 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 711

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||||||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 712 agaccgacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 771

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 772 tcaagtc 778



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 794 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 841
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>dbj|AK098999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N22, full
           insert sequence
          Length = 1011

 Score =  299 bits (151), Expect = 5e-78
 Identities = 268/307 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 479 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 538

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 539 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 598

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 599 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 658

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 659 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 718

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||||||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 719 agaccgacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 778

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 779 tcaagtc 785



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 848
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>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full
           insert sequence
          Length = 2916

 Score =  299 bits (151), Expect = 5e-78
 Identities = 268/307 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 635 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 576

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 575 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 516

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 515 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 456

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 455 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 396

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||||||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 395 agaccgacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 336

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 335 tcaagtc 329



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 266
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>dbj|AK070779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072F09, full
           insert sequence
          Length = 1044

 Score =  299 bits (151), Expect = 5e-78
 Identities = 268/307 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 501 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 560

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 561 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 620

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 621 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 680

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 681 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 740

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||||||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 741 agaccgacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 800

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 801 tcaagtc 807



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 823 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 870
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>dbj|AK059557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G09, full
           insert sequence
          Length = 1013

 Score =  299 bits (151), Expect = 5e-78
 Identities = 268/307 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 476 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 535

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 536 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 595

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 596 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 655

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 656 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 715

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||||||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 716 agaccgacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 775

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 776 tcaagtc 782



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 845
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>gb|AF095708.1|AF095708 Oryza sativa clone LS101 50S ribosomal protein L5 (rpl5) mRNA,
           nuclear gene encoding chloroplast protein, partial cds
          Length = 1025

 Score =  291 bits (147), Expect = 1e-75
 Identities = 267/307 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggcaacacaatcggtatcgccgtcactctccgcggcagggtgatgttcaacttcttgg 60
           |||| ||||| || ||||| ||||| || |||||||||||||| |||||||||||| |||
Sbjct: 468 aggggaacaccattggtattgccgttacgctccgcggcagggtaatgttcaacttcctgg 527

                                                                       
Query: 61  ataggctcatcaaccttgggctccctaggaccatggacttcctaggcgtcaaccccaaca 120
           |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 528 ataggctcatcaaccttgggcttcctaggaccatggacttccttggtgtcaaccccaaca 587

                                                                       
Query: 121 gcttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggaga 180
           |||| || || || ||||||| |||||| ||||| || || |||||||||||||||||||
Sbjct: 588 gctttgatggccatggcaacttcaccataggccttcgtgatcagggcgtgttcccggaga 647

                                                                       
Query: 181 tcccctacgaggtgggcggcaagaagaacggtatggacgtcaccatcgtcaccaccgcca 240
           |||| |||||||| || || |||||||| || |||||||||  ||||||||||||||| |
Sbjct: 648 tcccgtacgaggtcggtgggaagaagaatggaatggacgtctgcatcgtcaccaccgcga 707

                                                                       
Query: 241 agaccgacaacgaggcgcaaaggctgcttgcactcctcggcatgccattcgccgagaaca 300
           |||| ||||||||||| |  ||||||||  | ||||| |||||||| ||||| ||| |||
Sbjct: 708 agacggacaacgaggctctcaggctgctcaccctccttggcatgccgttcgcggagcaca 767

                  
Query: 301 tcaagtc 307
           |||||||
Sbjct: 768 tcaagtc 774



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Plus

                                                           
Query: 320 gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 837
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                           
Query: 45      atgttcaacttcttggataggctcatcaaccttgggctccctaggaccatggacttccta 104
               |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 1413933 atgttcaacttcctggataggctcatcaaccttgggcttcctaggaccatggacttcctt 1413874

                                                                           
Query: 105     ggcgtcaaccccaacagcttcgacgggcacggcaactacaccatcggcctccgcgaccag 164
               || ||||||||||||||||| || || || ||||||| |||||| ||||| || || |||
Sbjct: 1413873 ggtgtcaaccccaacagctttgatggccatggcaacttcaccataggccttcgtgatcag 1413814

                                                                           
Query: 165     ggcgtgttcccggagatcccctacgaggtgggcggcaagaagaacggtatggacgtcacc 224
               |||||||||||||||||||| |||||||| || || |||||||| || |||||||||  |
Sbjct: 1413813 ggcgtgttcccggagatcccgtacgaggtcggtgggaagaagaatggaatggacgtctgc 1413754

                                                                           
Query: 225     atcgtcaccaccgccaagaccgacaacgaggcgcaaaggctgcttgcactcctcggcatg 284
               |||||||||||||| ||||||||||||||||| |  ||||||||  | ||||| ||||||
Sbjct: 1413753 atcgtcaccaccgcgaagaccgacaacgaggctctcaggctgctcaccctccttggcatg 1413694

                                      
Query: 285     ccattcgccgagaacatcaagtc 307
               || ||||| ||| ||||||||||
Sbjct: 1413693 ccgttcgcggagcacatcaagtc 1413671



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                               
Query: 320     gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
               |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1413655 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 1413608



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                            
Query: 1       agggcaacacaatcggtatcgccgtcactctccgcggcagggtga 45
               |||| ||||| || ||||| ||||| || ||||||||||||||||
Sbjct: 1414368 aggggaacaccattggtattgccgttacgctccgcggcagggtga 1414324
to top
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                         
Query: 45    atgttcaacttcttggataggctcatcaaccttgggctccctaggaccatggacttccta 104
             |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 75436 atgttcaacttcctggataggctcatcaaccttgggcttcctaggaccatggacttcctt 75377

                                                                         
Query: 105   ggcgtcaaccccaacagcttcgacgggcacggcaactacaccatcggcctccgcgaccag 164
             || ||||||||||||||||| || || || ||||||| |||||| ||||| || || |||
Sbjct: 75376 ggtgtcaaccccaacagctttgatggccatggcaacttcaccataggccttcgtgatcag 75317

                                                                         
Query: 165   ggcgtgttcccggagatcccctacgaggtgggcggcaagaagaacggtatggacgtcacc 224
             |||||||||||||||||||| |||||||| || || |||||||| || |||||||||  |
Sbjct: 75316 ggcgtgttcccggagatcccgtacgaggtcggtgggaagaagaatggaatggacgtctgc 75257

                                                                         
Query: 225   atcgtcaccaccgccaagaccgacaacgaggcgcaaaggctgcttgcactcctcggcatg 284
             |||||||||||||| ||||||||||||||||| |  ||||||||  | ||||| ||||||
Sbjct: 75256 atcgtcaccaccgcgaagaccgacaacgaggctctcaggctgctcaccctccttggcatg 75197

                                    
Query: 285   ccattcgccgagaacatcaagtc 307
             || ||||| ||| ||||||||||
Sbjct: 75196 ccgttcgcggagcacatcaagtc 75174



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                             
Query: 320   gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
             |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 75158 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 75111



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 1     agggcaacacaatcggtatcgccgtcactctccgcggcagggtga 45
             |||| ||||| || ||||| ||||| || ||||||||||||||||
Sbjct: 75871 aggggaacaccattggtattgccgttacgctccgcggcagggtga 75827
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  268 bits (135), Expect = 2e-68
 Identities = 231/263 (87%)
 Strand = Plus / Minus

                                                                           
Query: 45      atgttcaacttcttggataggctcatcaaccttgggctccctaggaccatggacttccta 104
               |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 1413931 atgttcaacttcctggataggctcatcaaccttgggcttcctaggaccatggacttcctt 1413872

                                                                           
Query: 105     ggcgtcaaccccaacagcttcgacgggcacggcaactacaccatcggcctccgcgaccag 164
               || ||||||||||||||||| || || || ||||||| |||||| ||||| || || |||
Sbjct: 1413871 ggtgtcaaccccaacagctttgatggccatggcaacttcaccataggccttcgtgatcag 1413812

                                                                           
Query: 165     ggcgtgttcccggagatcccctacgaggtgggcggcaagaagaacggtatggacgtcacc 224
               |||||||||||||||||||| |||||||| || || |||||||| || |||||||||  |
Sbjct: 1413811 ggcgtgttcccggagatcccgtacgaggtcggtgggaagaagaatggaatggacgtctgc 1413752

                                                                           
Query: 225     atcgtcaccaccgccaagaccgacaacgaggcgcaaaggctgcttgcactcctcggcatg 284
               |||||||||||||| ||||||||||||||||| |  ||||||||  | ||||| ||||||
Sbjct: 1413751 atcgtcaccaccgcgaagaccgacaacgaggctctcaggctgctcaccctccttggcatg 1413692

                                      
Query: 285     ccattcgccgagaacatcaagtc 307
               || ||||| ||| ||||||||||
Sbjct: 1413691 ccgttcgcggagcacatcaagtc 1413669



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                               
Query: 320     gaagaagaggntgaagcgccaccacttcatgagcaagggcaggggaag 367
               |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1413653 gaagaagaggttgaagcgccaccacttcatgagcaagggcaggggaag 1413606



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                            
Query: 1       agggcaacacaatcggtatcgccgtcactctccgcggcagggtga 45
               |||| ||||| || ||||| ||||| || ||||||||||||||||
Sbjct: 1414366 aggggaacaccattggtattgccgttacgctccgcggcagggtga 1414322
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 213    atggacgtcaccatcgtcaccaccgccaagaccgac 248
              |||||| |||||||||| ||||||||||||||||||
Sbjct: 318733 atggacatcaccatcgtgaccaccgccaagaccgac 318768
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                              
Query: 220     tcaccatcgtcaccaccgccaagaccgacaa 250
               ||||||||||||||||||||| |||||||||
Sbjct: 1399316 tcaccatcgtcaccaccgccacgaccgacaa 1399346
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 213     atggacgtcaccatcgtcaccaccgccaagaccgacaacgaggcg 257
               |||||||| | ||||||||| ||||||||||||||| | ||||||
Sbjct: 3269130 atggacgtgatcatcgtcacgaccgccaagaccgacgaagaggcg 3269086
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 123     ttcgacgggcacggcaactacaccatcggcct 154
               |||||||| ||||||||||||||| |||||||
Sbjct: 2096371 ttcgacggccacggcaactacaccttcggcct 2096340
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 105     ggcgtcaaccccaacagcttcgacgggcacggcaactacaccatcggcctccgcga 160
               ||||||| ||||||   ||||||||| | ||||||||||||| ||||||| |||||
Sbjct: 4113776 ggcgtcagccccaaagccttcgacggccgcggcaactacaccctcggcctgcgcga 4113721



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     caaccccaacagcttcgacg 129
               ||||||||||||||||||||
Sbjct: 1995939 caaccccaacagcttcgacg 1995958
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>gb|AC129323.6| Mus musculus BAC clone RP23-237M15 from 9, complete sequence
          Length = 170293

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 429    cttttgcatagtttggtttagatattt 455
              ||||||||||||||| |||||||||||
Sbjct: 147152 cttttgcatagtttgttttagatattt 147126
to top
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence
          Length = 188083

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 429   cttttgcatagtttggtttagatattt 455
             ||||||||||||||| |||||||||||
Sbjct: 13249 cttttgcatagtttgttttagatattt 13223
to top
>emb|Z99129.1|HS425C14 Human DNA sequence from clone RP3-425C14 on chromosome 6q22 Contains the
              3' end of the HSF2 gene for  Heat Shock Transcription
              Factor 2 and the 3' end of a novel gene for KIAA1253
              protein (similar to tumor differentially expressed TDE1),
              complete sequence
          Length = 160203

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 472    cttattacttgctgttcatgtt 493
              ||||||||||||||||||||||
Sbjct: 119351 cttattacttgctgttcatgtt 119330
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 230     caccaccgccaagaccgacaa 250
               |||||||||||||||||||||
Sbjct: 2637984 caccaccgccaagaccgacaa 2637964
to top
>gb|AC108835.8| Mus musculus chromosome 6, clone RP23-274E24, complete sequence
          Length = 173365

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 467   tgtctcttattacttgctgtt 487
             |||||||||||||||||||||
Sbjct: 55855 tgtctcttattacttgctgtt 55835
to top
>emb|X56552.1|TASPCOP T.aquaticus spc operon for ribosomal proteins S17, L14, L24, L5, S14,
            S8 & L6
          Length = 2700

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 96   gacttcctaggcgtcaaccccaacagcttcgacgggcacggcaactaca 144
            |||||||  ||| |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1427 gacttccgcggcctcaaccccaacagctttgacggccggggcaactaca 1475
to top
>gb|S77828.1| ribosomal protein L5 [Thermus aquaticus, Genomic, 549 nt]
          Length = 549

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 96  gacttcctaggcgtcaaccccaacagcttcgacgggcacggcaactaca 144
           |||||||  ||| |||||||||||||||| ||||| |  ||||||||||
Sbjct: 346 gacttccgcggcctcaaccccaacagctttgacggccggggcaactaca 394
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 122     cttcgacgggcacggcaactacaccatcggcctccgcgaccagggcgtgttcccggagat 181
               |||||||||| | |||||||||||  ||||| ||||||| |||  | | |||||||||||
Sbjct: 2180494 cttcgacgggaagggcaactacacgctcggcgtccgcgagcagatcatcttcccggagat 2180435

                
Query: 182     c 182
               |
Sbjct: 2180434 c 2180434
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>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the
              complete sequence
          Length = 350029

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 396    cctttgttgcttcccactttg 416
              |||||||||||||||||||||
Sbjct: 215862 cctttgttgcttcccactttg 215842
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 209     cggtatggacgtcaccatcgtcaccaccgccaagaccgacaacgaggcg 257
               |||||||||| ||||| ||  |||||| |||||||||||| | ||||||
Sbjct: 5930482 cggtatggacatcaccgtctgcaccacggccaagaccgacgaagaggcg 5930434
to top
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184707

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cctttgttgcttcccactttg 416
              |||||||||||||||||||||
Sbjct: 112037 cctttgttgcttcccactttg 112057
to top
>gb|AF023909.1|AF023909 Rhodobacter sphaeroides nitrogen regulatory protein GlnK (glnK)
           gene, complete cds; and putative ammonia transporter
           (amtB) gene, partial cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 230 caccaccgccaagaccgacaa 250
           |||||||||||||||||||||
Sbjct: 821 caccaccgccaagaccgacaa 841
to top
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 224 catcgtcaccaccgccaagaccgacaac 251
           |||||||||||||||| || ||||||||
Sbjct: 945 catcgtcaccaccgccgagtccgacaac 972
to top
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 224  catcgtcaccaccgccaagaccgacaac 251
            |||||||||||||||| || ||||||||
Sbjct: 1065 catcgtcaccaccgccgagtccgacaac 1092
to top
>gb|AC005600.1| Homo sapiens chromosome 16, P1 clone 109-9G (LANL), complete sequence
          Length = 79586

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 350  gagcaagggcaggggaagga 369
            ||||||||||||||||||||
Sbjct: 7207 gagcaagggcaggggaagga 7188
to top
>gb|AC005371.1| Homo sapiens chromosome 5, BAC clone 342p15 (LBNL H189), complete
             sequence
          Length = 142600

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ggcagggtgatgttcaactt 55
             ||||||||||||||||||||
Sbjct: 38414 ggcagggtgatgttcaactt 38433
to top
>gb|AC162522.6| Mus musculus chromosome 8, clone RP23-314A15, complete sequence
          Length = 187888

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    gttgcttcccactttgtcaa 420
              ||||||||||||||||||||
Sbjct: 180975 gttgcttcccactttgtcaa 180956
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 209     cggtatggacgtcaccatcgtcaccaccgccaagaccgac 248
               |||||||||| ||||  |||| ||||||||||||| ||||
Sbjct: 2077242 cggtatggacatcacggtcgtgaccaccgccaagaacgac 2077203
to top
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 236662

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    catgagcaagggcaggggaa 366
              ||||||||||||||||||||
Sbjct: 235273 catgagcaagggcaggggaa 235292
to top
>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    agggcaggggaaggaagtga 374
              ||||||||||||||||||||
Sbjct: 160690 agggcaggggaaggaagtga 160671
to top
>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   gagcaagggcaggggaagga 369
             ||||||||||||||||||||
Sbjct: 60653 gagcaagggcaggggaagga 60672
to top
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    agggcaggggaaggaagtga 374
              ||||||||||||||||||||
Sbjct: 154921 agggcaggggaaggaagtga 154940
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 218     cgtcaccatcgtcaccaccg 237
               ||||||||||||||||||||
Sbjct: 2351534 cgtcaccatcgtcaccaccg 2351553
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     cccggagatcccctacgagg 192
               ||||||||||||||||||||
Sbjct: 1604267 cccggagatcccctacgagg 1604286
to top
>emb|X17524.1|MLSPCOPER M.luteus DNA for spectinomycin (spc) operon
          Length = 6858

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 123  ttcgacgggcacggcaactacaccatcggcct 154
            ||||||||  |||||||||||||| |||||||
Sbjct: 1458 ttcgacggcaacggcaactacaccttcggcct 1489
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gacgtcaccatcgtcaccac 235
              ||||||||||||||||||||
Sbjct: 100630 gacgtcaccatcgtcaccac 100611
to top
>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence
          Length = 138824

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ggcagggtgatgttcaactt 55
             ||||||||||||||||||||
Sbjct: 96775 ggcagggtgatgttcaactt 96794
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     ctacgaggtgggcggcaaga 204
               ||||||||||||||||||||
Sbjct: 4241521 ctacgaggtgggcggcaaga 4241540
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     accaccgccaagaccgacaa 250
               ||||||||||||||||||||
Sbjct: 4161560 accaccgccaagaccgacaa 4161579
to top
>gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, complete sequence
          Length = 212598

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    gttgcttcccactttgtcaa 420
              ||||||||||||||||||||
Sbjct: 164095 gttgcttcccactttgtcaa 164114
to top
>gb|S77826.1| ribosomal protein L5 [Thermus flavus, Genomic, 549 nt]
          Length = 549

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 109 tcaaccccaacagcttcgacgggcacggcaactaca 144
           |||||||||||||||| ||||| |  ||||||||||
Sbjct: 359 tcaaccccaacagctttgacggccggggcaactaca 394
to top
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    agcaagggcaggggaaggaa 370
              ||||||||||||||||||||
Sbjct: 199403 agcaagggcaggggaaggaa 199384
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     cgtcaccatcgtcaccaccg 237
               ||||||||||||||||||||
Sbjct: 3825558 cgtcaccatcgtcaccaccg 3825539
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 224      catcgtcaccaccgccaagaccgacaac 251
                |||||||||||||||| || ||||||||
Sbjct: 23047390 catcgtcaccaccgccgagtccgacaac 23047363



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 224      catcgtcaccaccgccaagaccgacaac 251
                |||||||||||||||| || ||||||||
Sbjct: 23027052 catcgtcaccaccgccgagtccgacaac 23027079
to top
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence
          Length = 95291

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   gaaggaagtgaagatcaagc 383
             ||||||||||||||||||||
Sbjct: 13925 gaaggaagtgaagatcaagc 13944
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>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence
          Length = 159741

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    agcaagggcaggggaaggaa 370
              ||||||||||||||||||||
Sbjct: 120041 agcaagggcaggggaaggaa 120060
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 295    agaacatcaagtctgaccagttcaagaa 322
              |||||||||||| ||||||| |||||||
Sbjct: 979118 agaacatcaagtatgaccagatcaagaa 979145
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 109     tcaaccccaacagcttcgacgggcacggcaactaca 144
               |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1585009 tcaaccccaacagctttgacggccggggcaactaca 1584974
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 224     catcgtcaccaccgccaagaccga 247
               |||||||||||||||||| |||||
Sbjct: 1129409 catcgtcaccaccgccaacaccga 1129386
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 224    catcgtcaccaccgccaagaccgacaac 251
              |||||||||||||||| || ||||||||
Sbjct: 107118 catcgtcaccaccgccgagtccgacaac 107091



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 224   catcgtcaccaccgccaagaccgacaac 251
             |||||||||||||||| || ||||||||
Sbjct: 86780 catcgtcaccaccgccgagtccgacaac 86807
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>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full
            insert sequence
          Length = 3147

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 224  catcgtcaccaccgccaagaccgacaac 251
            |||||||||||||||| || ||||||||
Sbjct: 1065 catcgtcaccaccgccgagtccgacaac 1092
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>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full
           insert sequence
          Length = 2361

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 224 catcgtcaccaccgccaagaccgacaac 251
           |||||||||||||||| || ||||||||
Sbjct: 322 catcgtcaccaccgccgagtccgacaac 349
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>emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons
            1-2 and joined CDS
          Length = 1700

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 224  catcgtcaccaccgccaagaccgacaac 251
            |||||||||||||||| || ||||||||
Sbjct: 1232 catcgtcaccaccgccgagtccgacaac 1259
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     gcctccgcgaccagggcgtg 170
               ||||||||||||||||||||
Sbjct: 2825392 gcctccgcgaccagggcgtg 2825411
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 109     tcaaccccaacagcttcgacgggcacggcaactaca 144
               |||||||||||||||| ||||| |  ||||||||||
Sbjct: 1260879 tcaaccccaacagctttgacggccggggcaactaca 1260844
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>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete
             sequence
          Length = 201752

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   agggcaggggaaggaagtga 374
             ||||||||||||||||||||
Sbjct: 95889 agggcaggggaaggaagtga 95908
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>gb|AC131182.3| Homo sapiens BAC clone RP11-392B6 from 4, complete sequence
          Length = 101396

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 515   aaatggaaagttttgctttggtca 538
             |||| |||||||||||||||||||
Sbjct: 74760 aaattgaaagttttgctttggtca 74737
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>dbj|AB016243.1| Homo sapiens gene for regulatory factor 2 of sodium/hydrogen
            exchanger isoform A3, complete cds
          Length = 14728

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 350  gagcaagggcaggggaagga 369
            ||||||||||||||||||||
Sbjct: 5428 gagcaagggcaggggaagga 5409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,314,904
Number of Sequences: 3902068
Number of extensions: 4314904
Number of successful extensions: 86070
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85158
Number of HSP's gapped (non-prelim): 911
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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