ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106298.1| Zea mays PCO074618 mRNA sequence 107 4e-20
2gb|BT017510.1| Zea mays clone EL01N0417E07.c mRNA sequence 100 1e-17
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
4dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
5dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
6dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
7ref|XM_479484.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10ref|XM_464029.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
11ref|XM_483821.1| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
13dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
14dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
15ref|NM_111428.1| Arabidopsis thaliana unknown protein AT3G05550 ... 46 0.14
16ref|XM_506846.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.14
17ref|XM_466492.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
18ref|XM_464028.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
19gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC... 46 0.14
20gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC... 46 0.14
21emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 46 0.14
22emb|AJ535211.1|OSA535211 Oryza sativa mRNA for SMC3 protein 46 0.14
23gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 46 0.14
24dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
25dbj|AK121468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
26dbj|AK105384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
27emb|Y16855.1|DME16855 Drosophila melanogaster (isolate M47) Anp,... 44 0.55
28gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 44 0.55
29emb|Y16859.1|DME16859 Drosophila melanogaster (isolate M11) Anp,... 44 0.55
30dbj|AB010795.1| Drosophila melanogaster genes for cecropin A1 (p... 44 0.55
31dbj|AB010792.1| Drosophila melanogaster genes for cecropin A1, P... 44 0.55
32dbj|AB010791.1| Drosophila melanogaster genes for cecropin A1, P... 44 0.55
33gb|AE002114.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 42 2.2
34gb|AC118004.6| Mus musculus chromosome 16, clone RP23-212P2, com... 42 2.2
35gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 42 2.2
36emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chro... 42 2.2
37emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 2.2
38emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 42 2.2
39emb|AL670865.8| Mouse DNA sequence from clone RP23-395J4 on chro... 42 2.2
40gb|AC139313.11| Medicago truncatula clone mth2-18l7, complete se... 42 2.2
41gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, com... 42 2.2
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
43gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F... 42 2.2
44gb|AC009434.19| Homo sapiens chromosome 15, clone RP11-96C21, co... 42 2.2
45emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chr... 42 2.2
46gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 42 2.2
47emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.2
48emb|CT485615.6| Mouse DNA sequence from clone RP23-32L22 on chro... 42 2.2
49ref|NM_197076.1| Oryza sativa (japonica cultivar-group) unknown ... 40 8.6
50gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, com... 40 8.6
51gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, com... 40 8.6
52gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, com... 40 8.6
53emb|CR352290.10| Zebrafish DNA sequence from clone DKEY-107G12 i... 40 8.6
54gb|AC133165.3| Mus musculus BAC clone RP24-357P16 from chromosom... 40 8.6
55gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome... 40 8.6
56gb|AC124685.5| Mus musculus BAC clone RP24-385O22 from chromosom... 40 8.6
57gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosom... 40 8.6
58emb|AL627316.30| Human DNA sequence from clone RP11-259G3 on chr... 40 8.6
59emb|AJ222725.1|LAH222725 Lactobacillus helveticus plasmid pLH1 c... 40 8.6
60gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 40 8.6
61gb|AC171368.3| Cavia porcellus clone CH234-176E17, complete sequ... 40 8.6
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
63gb|AC007424.40| Homo sapiens 12 BAC RP11-1016B18 (Roswell Park C... 40 8.6
64gb|AC007970.3| Homo sapiens BAC clone RP11-485G2 from 2, complet... 40 8.6
65dbj|AK070826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
66emb|CT572989.7| Mouse DNA sequence from clone RP24-176J14 on chr... 40 8.6
67emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-8... 40 8.6
68gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 40 8.6
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
70emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, ... 40 8.6
71dbj|AP004502.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.6
72emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chro... 40 8.6
73gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HB... 40 8.6
74emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chrom... 40 8.6
75emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chr... 40 8.6 
>gb|AY106298.1| Zea mays PCO074618 mRNA sequence
          Length = 813

 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                       
Query: 12  tccatcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgcc 71
           |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 356 tccatcgcctacaactggtccaggccgggcatgaagaccagcgtcaagatcatccacgcc 415

             
Query: 72  ag 73
           ||
Sbjct: 416 ag 417
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>gb|BT017510.1| Zea mays clone EL01N0417E07.c mRNA sequence
          Length = 667

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                       
Query: 12  tccatcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgcc 71
           |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 263 tccatcgcctacaactggtccaagccgggcatgaagaccagcgtcaagatcatccacgcc 322

             
Query: 72  ag 73
           ||
Sbjct: 323 ag 324
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 15       atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
                ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 28430986 atcgcgtacaactggtcgaggcccggcatgaagaccagcgtcaagatcatccacgccag 28431044
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                         
Query: 15     atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
              ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 156549 atcgcgtacaactggtcgaggcccggcatgaagaccagcgtcaagatcatccacgccag 156607
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>dbj|AK120859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024E09, full
           insert sequence
          Length = 696

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                      
Query: 15  atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
           ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 191 atcgcgtacaactggtcgaggcccggcatgaagaccagcgtcaagatcatccacgccag 249
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>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0304A10
          Length = 21211

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 15    atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
             ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12773 atcgcgtacaactggtcgaggcccggcatgaagaccagcgtcaagatcatccacgccag 12831
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>ref|XM_479484.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 300

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                    
Query: 15  atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgcc 71
           ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 100 atcgcgtacaactggtcgaggcccggcatgaagaccagcgtcaagatcatccacgcc 156
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 99       aaggaggatcactaccactcaaagcgccacaagaagaggtaatccccttgt 149
                |||||||| ||||||| |||||||||||||||||| |||| ||| ||||||
Sbjct: 28266583 aaggaggagcactaccgctcaaagcgccacaagaaaaggtgatcgccttgt 28266533
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>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0705A05
          Length = 143765

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 99    aaggaggatcactaccactcaaagcgccacaagaagaggtaatccccttgt 149
             |||||||| ||||||| |||||||||||||||||| |||| ||| ||||||
Sbjct: 58398 aaggaggagcactaccgctcaaagcgccacaagaaaaggtgatcgccttgt 58348
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>ref|XM_464029.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3672

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 468 ggtgcaaatggatctggaaaatcaaactttttgcatgcta 507
           ||||||||||||||||| ||||||||||| || |||||||
Sbjct: 94  ggtgcaaatggatctggcaaatcaaacttcttccatgcta 133
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>ref|XM_483821.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 99  aaggaggatcactaccactcaaagcgccacaagaa 133
           |||||||| ||||||| ||||||||||||||||||
Sbjct: 328 aaggaggagcactaccgctcaaagcgccacaagaa 362
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 463     cagttggtgcaaatggatctggaaaatcaaactttttgcatgctaat 509
               |||| ||||||||||||||||| ||||||||||| || |||| ||||
Sbjct: 1781629 cagtcggtgcaaatggatctggcaaatcaaacttcttccatggtaat 1781583



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 454     tgtttcttgcagttggtgcaaatggatctggaaaatcaaa 493
               ||||| || ||||||| |||||||||||||| ||||||||
Sbjct: 1763600 tgtttattacagttggggcaaatggatctggcaaatcaaa 1763561



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 21       tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
                ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 22947544 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 22947590
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G11
          Length = 143943

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 463   cagttggtgcaaatggatctggaaaatcaaactttttgcatgctaat 509
             |||| ||||||||||||||||| ||||||||||| || |||| ||||
Sbjct: 99641 cagtcggtgcaaatggatctggcaaatcaaacttcttccatggtaat 99595



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 454   tgtttcttgcagttggtgcaaatggatctggaaaatcaaa 493
             ||||| || ||||||| |||||||||||||| ||||||||
Sbjct: 81612 tgtttattacagttggggcaaatggatctggcaaatcaaa 81573
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 463   cagttggtgcaaatggatctggaaaatcaaactttttgcatgctaat 509
             |||| ||||||||||||||||| ||||||||||| || |||| ||||
Sbjct: 18273 cagtcggtgcaaatggatctggcaaatcaaacttcttccatggtaat 18227



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 454 tgtttcttgcagttggtgcaaatggatctggaaaatcaaa 493
           ||||| || ||||||| |||||||||||||| ||||||||
Sbjct: 244 tgtttattacagttggggcaaatggatctggcaaatcaaa 205
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>ref|NM_111428.1| Arabidopsis thaliana unknown protein AT3G05550 mRNA, complete cds
          Length = 294

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 15  atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
           |||||||| |||||||||   || | |||||| ||||| |||||| |||||||||||||
Sbjct: 103 atcgcctataactggtcccaacctgccatgaaaaccagtgtcaagatcatccacgccag 161
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>ref|XM_506846.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.13
           mRNA
          Length = 758

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 21  tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
           ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 228 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 274
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>ref|XM_466492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 665

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 21  tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
           ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 231 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 277
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>ref|XM_464028.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3618

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 465 gttggtgcaaatggatctggaaaatcaaactttttgcatgcta 507
           ||||| |||||||||||||| |||||||| || || |||||||
Sbjct: 91  gttggggcaaatggatctggcaaatcaaatttcttccatgcta 133
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>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence,
             complete sequence
          Length = 100887

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 15    atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
             |||||||| |||||||||   || | |||||| ||||| |||||| |||||||||||||
Sbjct: 93864 atcgcctataactggtcccaacctgccatgaaaaccagtgtcaagatcatccacgccag 93806
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>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence,
            complete sequence
          Length = 91924

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 15   atcgcctacaactggtccaggcccggcatgaagaccagcgtcaagctcatccacgccag 73
            |||||||| |||||||||   || | |||||| ||||| |||||| |||||||||||||
Sbjct: 7574 atcgcctataactggtcccaacctgccatgaaaaccagtgtcaagatcatccacgccag 7516
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>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 2/4
          Length = 346939

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 464    agttggtgcaaatggatctggaaaatcaaac 494
              ||||||| |||||||||||||||| ||||||
Sbjct: 197057 agttggtccaaatggatctggaaagtcaaac 197027
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>emb|AJ535211.1|OSA535211 Oryza sativa mRNA for SMC3 protein
          Length = 3618

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 465 gttggtgcaaatggatctggaaaatcaaactttttgcatgcta 507
           ||||| |||||||||||||| |||||||| || || |||||||
Sbjct: 91  gttggggcaaatggatctggcaaatcaaatttcttccatgcta 133
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 468     ggtgcaaatggatctggaaaatcaaac 494
               |||||||||||||| ||||||||||||
Sbjct: 1219887 ggtgcaaatggatcaggaaaatcaaac 1219861
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 21    tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
             ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 67346 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 67392
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>dbj|AK121468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147K15, full
           insert sequence
          Length = 666

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 21  tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
           ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 232 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 278
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>dbj|AK105384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C12, full
           insert sequence
          Length = 758

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 21  tacaactggtccaggcccggcatgaagaccagcgtcaagctcatcca 67
           ||||||||||| ||||||   |||||||| ||||||||| |||||||
Sbjct: 228 tacaactggtcgaggcccaatatgaagactagcgtcaagatcatcca 274
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>emb|Y16855.1|DME16855 Drosophila melanogaster (isolate M47) Anp, CecA1, CecA2, CecB genes
            and CecPsi1 and CecPsi2 pseudogenes
          Length = 3991

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 514  taaaacatttggaaaatcaaactttt 539
            |||||||||||||||||||| |||||
Sbjct: 2362 taaaacatttggaaaatcaatctttt 2387
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 465    gttggtgcaaatggatctggaaaatcaaac 494
              |||||| ||||||| |||||||||||||||
Sbjct: 585714 gttggtccaaatggttctggaaaatcaaac 585743
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>emb|Y16859.1|DME16859 Drosophila melanogaster (isolate M11) Anp, CecA1, CecA2, CecB genes
            and CecPsi1 and CecPsi2 pseudogenes
          Length = 3976

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 514  taaaacatttggaaaatcaaactttt 539
            |||||||||||||||||||| |||||
Sbjct: 2363 taaaacatttggaaaatcaatctttt 2388
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>dbj|AB010795.1| Drosophila melanogaster genes for cecropin A1 (pseudo), Psi-1
            (pseudo), A2, Psi-2 (pseudo) and B, complete cds,
            strain:MJ2
          Length = 3054

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 514  taaaacatttggaaaatcaaactttt 539
            |||||||||||||||||||| |||||
Sbjct: 1736 taaaacatttggaaaatcaatctttt 1761
to top
>dbj|AB010792.1| Drosophila melanogaster genes for cecropin A1, Psi-1, A2, Psi-2
            (pseudo) and B, complete cds, strain:MA2
          Length = 3200

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 514  taaaacatttggaaaatcaaactttt 539
            |||||||||||||||||||| |||||
Sbjct: 1858 taaaacatttggaaaatcaatctttt 1883
to top
>dbj|AB010791.1| Drosophila melanogaster genes for cecropin A1, Psi-1, A2, Psi-2
            (pseudo) and B, complete cds, strain:MA1
          Length = 3148

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 514  taaaacatttggaaaatcaaactttt 539
            |||||||||||||||||||| |||||
Sbjct: 1841 taaaacatttggaaaatcaatctttt 1866
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>gb|AE002114.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 15 of 59 of the
             complete genome
          Length = 14589

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 466   ttggtgcaaatggatctggaaaatcaaac 494
             |||||||||||||| | ||||||||||||
Sbjct: 10307 ttggtgcaaatggaacaggaaaatcaaac 10335
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>gb|AC118004.6| Mus musculus chromosome 16, clone RP23-212P2, complete sequence
          Length = 205796

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 474    aatggatctggaaaatcaaactttt 498
              ||||||||||||| |||||||||||
Sbjct: 169623 aatggatctggaacatcaaactttt 169599
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>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    actgaactgaagtatcagttt 375
              |||||||||||||||||||||
Sbjct: 109138 actgaactgaagtatcagttt 109158
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>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the
             DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG
             island, complete sequence
          Length = 170066

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 474   aatggatctggaaaatcaaactttt 498
             ||||||||| |||||||||||||||
Sbjct: 42361 aatggatcttgaaaatcaaactttt 42337
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 82     tcgtggacgaggccgtgaaggagga 106
              ||||||||||||||||| |||||||
Sbjct: 273134 tcgtggacgaggccgtggaggagga 273110
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>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    ttcaactggttatgatgaatt 220
              |||||||||||||||||||||
Sbjct: 144470 ttcaactggttatgatgaatt 144490
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>emb|AL670865.8| Mouse DNA sequence from clone RP23-395J4 on chromosome 4, complete
             sequence
          Length = 112907

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 514   taaaacatttggaaaatcaaa 534
             |||||||||||||||||||||
Sbjct: 54842 taaaacatttggaaaatcaaa 54862
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>gb|AC139313.11| Medicago truncatula clone mth2-18l7, complete sequence
          Length = 91156

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 460  ttgcagttggtgcaaatggatctgg 484
            ||||||||||||| |||||||||||
Sbjct: 6097 ttgcagttggtgctaatggatctgg 6121
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>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence
          Length = 167912

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 474   aatggatctggaaaatcaaactttt 498
             ||||||||| |||||||||||||||
Sbjct: 40207 aatggatcttgaaaatcaaactttt 40183
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 200      ttcaactggttatgatgaatt 220
                |||||||||||||||||||||
Sbjct: 34938357 ttcaactggttatgatgaatt 34938377
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>gb|AC009264.6|AC009264 Homo sapiens chromosome 7 clone RP11-271F4, complete sequence
          Length = 164824

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 271    ctagtactttgtttcatcttttcat 295
              |||||| ||||||||||||||||||
Sbjct: 149334 ctagtattttgtttcatcttttcat 149358
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>gb|AC009434.19| Homo sapiens chromosome 15, clone RP11-96C21, complete sequence
          Length = 177207

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 316   tttccattctttgtcttccctgatg 340
             ||||||||||||| |||||||||||
Sbjct: 65977 tttccattctttggcttccctgatg 65953
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>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete
              sequence
          Length = 214496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 514    taaaacatttggaaaatcaaa 534
              |||||||||||||||||||||
Sbjct: 204067 taaaacatttggaaaatcaaa 204087
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>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative
             Cf-2, fertilization-independent endosperm proteins,
             hypothetical protein, putative non-LTR retroelement
             reverse transcriptase, OCL5 protein, tryptophan synthase
             beta-subunit, hypothetical proteins, putative AP
             endonuclease, putative RNA polymerase II complex component
             SRB7, putative beta-1,3-glucanase, hypothetical protein,
             TNP2-like protein, hypothetical protein, putative
             phosphate/phosphoenolpyruvate translocator, putative
             protein, hypothetical proteins, putative
             galactosyltransferase family, hypothetical protein,
             putative cytochrome P450 family, putative lipid transfer
             protein, putative photoreceptor-interacting protein, and
             hypothetical protein genes, complete cds; and hypothetical
             protein gene, partial cds
          Length = 202197

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 514   taaaacatttggaaaatcaaacttt 538
             ||||||||||||||| |||||||||
Sbjct: 37011 taaaacatttggaaactcaaacttt 36987
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   ttcaactggttatgatgaatt 220
             |||||||||||||||||||||
Sbjct: 43745 ttcaactggttatgatgaatt 43765
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>emb|CT485615.6| Mouse DNA sequence from clone RP23-32L22 on chromosome 16, complete
              sequence
          Length = 197249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 474    aatggatctggaaaatcaaactttt 498
              ||||||||||||| |||||||||||
Sbjct: 161075 aatggatctggaacatcaaactttt 161099
to top
>ref|NM_197076.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0029C15.5), mRNA
          Length = 1523

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 610  tatggttcccttgttatatt 629
            ||||||||||||||||||||
Sbjct: 1317 tatggttcccttgttatatt 1336
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>gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, complete sequence
          Length = 205851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   tttaaaacatttggaaaatc 531
             ||||||||||||||||||||
Sbjct: 77974 tttaaaacatttggaaaatc 77993
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>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence
          Length = 204724

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ctttgtttcatcttttcatt 296
              ||||||||||||||||||||
Sbjct: 101781 ctttgtttcatcttttcatt 101762
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>gb|AC114583.7| Mus musculus chromosome 1, clone RP23-195A24, complete sequence
          Length = 227529

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    tattagatcatgcatgtttt 566
              ||||||||||||||||||||
Sbjct: 139127 tattagatcatgcatgtttt 139146
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>emb|CR352290.10| Zebrafish DNA sequence from clone DKEY-107G12 in linkage group 18,
             complete sequence
          Length = 137797

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   tattagatcatgcatgtttt 566
             ||||||||||||||||||||
Sbjct: 47628 tattagatcatgcatgtttt 47647
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>gb|AC133165.3| Mus musculus BAC clone RP24-357P16 from chromosome 13, complete sequence
          Length = 181278

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    tttggaaaatcaaactttttccta 544
              ||||||||||||||||||| ||||
Sbjct: 108982 tttggaaaatcaaacttttcccta 109005
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>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence
          Length = 205173

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   ctttaaaacatttggaaaat 530
             ||||||||||||||||||||
Sbjct: 36438 ctttaaaacatttggaaaat 36419
to top
>gb|AC124685.5| Mus musculus BAC clone RP24-385O22 from chromosome 2, complete sequence
          Length = 174583

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 520   atttggaaaatcaaactttt 539
             ||||||||||||||||||||
Sbjct: 19550 atttggaaaatcaaactttt 19531
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>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   tggatctggaaaatcaaact 495
             ||||||||||||||||||||
Sbjct: 84007 tggatctggaaaatcaaact 84026
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>emb|AL627316.30| Human DNA sequence from clone RP11-259G3 on chromosome 1, complete
             sequence
          Length = 57477

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   tttaaaacatttggaaaatc 531
             ||||||||||||||||||||
Sbjct: 12607 tttaaaacatttggaaaatc 12626
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>emb|AJ222725.1|LAH222725 Lactobacillus helveticus plasmid pLH1 complete sequence, strain
             ATCC15009
          Length = 19360

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   acatttggaaaatcaaactt 537
             ||||||||||||||||||||
Sbjct: 10113 acatttggaaaatcaaactt 10094
to top
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
             sequence
          Length = 148816

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   tatggttcccttgttatatt 629
             ||||||||||||||||||||
Sbjct: 87517 tatggttcccttgttatatt 87498
to top
>gb|AC171368.3| Cavia porcellus clone CH234-176E17, complete sequence
          Length = 179405

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   tttgtttcatcttttcatta 297
             ||||||||||||||||||||
Sbjct: 83785 tttgtttcatcttttcatta 83804
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 610      tatggttcccttgttatatt 629
                ||||||||||||||||||||
Sbjct: 17844524 tatggttcccttgttatatt 17844543
to top
>gb|AC007424.40| Homo sapiens 12 BAC RP11-1016B18 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 83601

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  tttcatcttttcattattgc 301
            ||||||||||||||||||||
Sbjct: 9952 tttcatcttttcattattgc 9971
to top
>gb|AC007970.3| Homo sapiens BAC clone RP11-485G2 from 2, complete sequence
          Length = 138890

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   aactggttatgatgaattta 222
             ||||||||||||||||||||
Sbjct: 19416 aactggttatgatgaattta 19397
to top
>dbj|AK070826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064K14, full
            insert sequence
          Length = 1734

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 610  tatggttcccttgttatatt 629
            ||||||||||||||||||||
Sbjct: 1528 tatggttcccttgttatatt 1547
to top
>emb|CT572989.7| Mouse DNA sequence from clone RP24-176J14 on chromosome 9, complete
              sequence
          Length = 168760

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ctttgtttcatcttttcatt 296
              ||||||||||||||||||||
Sbjct: 166680 ctttgtttcatcttttcatt 166661
to top
>emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-860P2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201587

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    aaaatcaaactttttcctat 545
              ||||||||||||||||||||
Sbjct: 142778 aaaatcaaactttttcctat 142797
to top
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 467     tggtgcaaatggatctggaaaatc 490
               ||||| ||||||||||||||||||
Sbjct: 1176522 tggtgaaaatggatctggaaaatc 1176499
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 610      tatggttcccttgttatatt 629
                ||||||||||||||||||||
Sbjct: 17853777 tatggttcccttgttatatt 17853796
to top
>emb|AL954192.3| Zebrafish DNA sequence from clone CH211-215D15, complete sequence
          Length = 198052

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   ctttaaaacatttggaaaat 530
             ||||||||||||||||||||
Sbjct: 36471 ctttaaaacatttggaaaat 36452
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>dbj|AP004502.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT07E11, TM0033b,
             complete sequence
          Length = 80917

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tcatgcacatgctttagtag 249
             ||||||||||||||||||||
Sbjct: 56408 tcatgcacatgctttagtag 56389
to top
>emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chromosome 2, complete
             sequence
          Length = 108221

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   atggttcccttgttatatta 630
             ||||||||||||||||||||
Sbjct: 78384 atggttcccttgttatatta 78365
to top
>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
             sequence
          Length = 141216

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   cattgatttaactgtttctt 461
             ||||||||||||||||||||
Sbjct: 81379 cattgatttaactgtttctt 81360
to top
>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
              sequence
          Length = 182529

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    atttggaaaatcaaactttt 539
              ||||||||||||||||||||
Sbjct: 129001 atttggaaaatcaaactttt 128982
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>emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chromosome 2, complete
             sequence
          Length = 122538

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   ttagatcatgcatgttttgt 568
             ||||||||||||||||||||
Sbjct: 75519 ttagatcatgcatgttttgt 75500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,737,516
Number of Sequences: 3902068
Number of extensions: 6737516
Number of successful extensions: 133767
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133263
Number of HSP's gapped (non-prelim): 504
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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