| Clone Name | bags14j20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C01, full insert sequence Length = 2251 Score = 496 bits (250), Expect = e-137 Identities = 487/566 (86%) Strand = Plus / Plus Query: 24 tactacaaaaatcctgagctcacaaacgaggtcatggttgatggatggtttcatacagga 83 ||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 1529 tactataaaaatcctgagctcacgaatgaggtcatggctgatggatggtttcacacaggt 1588 Query: 84 gacattggagagatgaccccggatggaatcctgaaggttatcgaccggaagaagaacata 143 |||||||||||||||| | | ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 1589 gacattggagagatgaactcagatggaatcctgaaggtaattgaccgaaagaaaaatata 1648 Query: 144 tttaagctatcgcaaggggagtatgtcgcagttgagtatctggagaaagtatatgtcttc 203 || ||| | || |||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 1649 ttcaagttgtcacaaggggagtatgttgcagttgaatacctggagaaagtatatgttttc 1708 Query: 204 cctccaattattgaagatatctgggtgtacggggacagctacaaatcaatgttagtggca 263 ||||||| |||||||| ||||||| || |||||||||| || |||||||||||||||| Sbjct: 1709 cctccaaccgttgaagatgtctgggtatatggggacagcttcagatcaatgttagtggca 1768 Query: 264 gtagttaacccacatgaagaaaacaccatgaagtgggcagggtcaaatggctacaaaggc 323 |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| || Sbjct: 1769 gtagttaatccacatgaagagaacaccatgaagtgggcagaatcaaatggctgcaagggt 1828 Query: 324 tctttcagtgaaatatgcaaatctgaaggccttaaagagcatatccttaaagagctcgca 383 ||||| |||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1829 tcttttgctgaaatatgcaagtctgaaggccttaaagagcatatcctgaaagagctgcaa 1888 Query: 384 gcggctgcacagaagaacaagctacgaggtttcgagtacatcaaaggtgtaatgttggac 443 | | |||| |||||||||||||| || || ||||| ||||||||||||| |||||| Sbjct: 1889 tctgttgcagcaaagaacaagctacggggatttgagtatgtcaaaggtgtaatattggac 1948 Query: 444 ccggtaccttttgacattgaaagggatttggtcactgcaacaatgaagaagagaagaaac 503 || | ||||||||| |||||||||||||||| |||||||||||||| |||| ||||||| Sbjct: 1949 cctattccttttgaccttgaaagggatttggtgactgcaacaatgaaaaagaaaagaaac 2008 Query: 504 tacatgctaaagtattatcagcctgagattgataaagtatacaaaacattggagggtcag 563 |||||||||| ||||| ||||||||||||| ||||||||| ||| | |||||| ||| Sbjct: 2009 aacatgctaaaatattacaagcctgagattgagaaagtataccaaaaactggaggaacag 2068 Query: 564 agggctgcgagcaaagcaaagtaaag 589 |||| ||| |||| |||||||||| Sbjct: 2069 agggttgccgccaaatcaaagtaaag 2094
>dbj|AK069689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H22, full insert sequence Length = 2378 Score = 496 bits (250), Expect = e-137 Identities = 487/566 (86%) Strand = Plus / Plus Query: 24 tactacaaaaatcctgagctcacaaacgaggtcatggttgatggatggtttcatacagga 83 ||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 1530 tactataaaaatcctgagctcacgaatgaggtcatggctgatggatggtttcacacaggt 1589 Query: 84 gacattggagagatgaccccggatggaatcctgaaggttatcgaccggaagaagaacata 143 |||||||||||||||| | | ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 1590 gacattggagagatgaactcagatggaatcctgaaggtaattgaccgaaagaaaaatata 1649 Query: 144 tttaagctatcgcaaggggagtatgtcgcagttgagtatctggagaaagtatatgtcttc 203 || ||| | || |||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 1650 ttcaagttgtcacaaggggagtatgttgcagttgaatacctggagaaagtatatgttttc 1709 Query: 204 cctccaattattgaagatatctgggtgtacggggacagctacaaatcaatgttagtggca 263 ||||||| |||||||| ||||||| || |||||||||| || |||||||||||||||| Sbjct: 1710 cctccaaccgttgaagatgtctgggtatatggggacagcttcagatcaatgttagtggca 1769 Query: 264 gtagttaacccacatgaagaaaacaccatgaagtgggcagggtcaaatggctacaaaggc 323 |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| || Sbjct: 1770 gtagttaatccacatgaagagaacaccatgaagtgggcagaatcaaatggctgcaagggt 1829 Query: 324 tctttcagtgaaatatgcaaatctgaaggccttaaagagcatatccttaaagagctcgca 383 ||||| |||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1830 tcttttgctgaaatatgcaagtctgaaggccttaaagagcatatcctgaaagagctgcaa 1889 Query: 384 gcggctgcacagaagaacaagctacgaggtttcgagtacatcaaaggtgtaatgttggac 443 | | |||| |||||||||||||| || || ||||| ||||||||||||| |||||| Sbjct: 1890 tctgttgcagcaaagaacaagctacggggatttgagtatgtcaaaggtgtaatattggac 1949 Query: 444 ccggtaccttttgacattgaaagggatttggtcactgcaacaatgaagaagagaagaaac 503 || | ||||||||| |||||||||||||||| |||||||||||||| |||| ||||||| Sbjct: 1950 cctattccttttgaccttgaaagggatttggtgactgcaacaatgaaaaagaaaagaaac 2009 Query: 504 tacatgctaaagtattatcagcctgagattgataaagtatacaaaacattggagggtcag 563 |||||||||| ||||| ||||||||||||| ||||||||| ||| | |||||| ||| Sbjct: 2010 aacatgctaaaatattacaagcctgagattgagaaagtataccaaaaactggaggaacag 2069 Query: 564 agggctgcgagcaaagcaaagtaaag 589 |||| ||| |||| |||||||||| Sbjct: 2070 agggttgccgccaaatcaaagtaaag 2095
>dbj|AK059083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B01, full insert sequence Length = 1617 Score = 414 bits (209), Expect = e-112 Identities = 398/461 (86%) Strand = Plus / Plus Query: 24 tactacaaaaatcctgagctcacaaacgaggtcatggttgatggatggtttcatacagga 83 ||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 1157 tactataaaaatcctgagctcacgaatgaggtcatggctgatggatggtttcacacaggt 1216 Query: 84 gacattggagagatgaccccggatggaatcctgaaggttatcgaccggaagaagaacata 143 |||||||||||||||| | | ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 1217 gacattggagagatgaactcagatggaatcctgaaggtaattgaccgaaagaaaaatata 1276 Query: 144 tttaagctatcgcaaggggagtatgtcgcagttgagtatctggagaaagtatatgtcttc 203 || ||| | || |||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 1277 ttcaagttgtcacaaggggagtatgttgcagttgaatacctggagaaagtatatgttttc 1336 Query: 204 cctccaattattgaagatatctgggtgtacggggacagctacaaatcaatgttagtggca 263 ||||||| |||||||| ||||||| || |||||||||| || |||||||||||||||| Sbjct: 1337 cctccaaccgttgaagatgtctgggtatatggggacagcttcagatcaatgttagtggca 1396 Query: 264 gtagttaacccacatgaagaaaacaccatgaagtgggcagggtcaaatggctacaaaggc 323 |||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||| || Sbjct: 1397 gtagttaatccacatgaagagaacaccatgaagtgggcagaatcaaatggctgcaagggt 1456 Query: 324 tctttcagtgaaatatgcaaatctgaaggccttaaagagcatatccttaaagagctcgca 383 ||||| |||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1457 tcttttgctgaaatatgcaagtctgaaggccttaaagagcatatcctgaaagagctgcaa 1516 Query: 384 gcggctgcacagaagaacaagctacgaggtttcgagtacatcaaaggtgtaatgttggac 443 | | |||| |||||||||||||| || || ||||| ||||||||||||| |||||| Sbjct: 1517 tctgttgcagcaaagaacaagctacggggatttgagtatgtcaaaggtgtaatattggac 1576 Query: 444 ccggtaccttttgacattgaaagggatttggtcactgcaac 484 || | ||||||||| |||||||||||||||| ||| |||| Sbjct: 1577 cctattccttttgaccttgaaagggatttggtgactacaac 1617
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 184 bits (93), Expect = 2e-43 Identities = 141/157 (89%) Strand = Plus / Minus Query: 223 tctgggtgtacggggacagctacaaatcaatgttagtggcagtagttaacccacatgaag 282 ||||||| || |||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 120185 tctgggtatatggggacagcttcagatcaatgttagtggcagtagttaatccacatgaag 120126 Query: 283 aaaacaccatgaagtgggcagggtcaaatggctacaaaggctctttcagtgaaatatgca 342 | ||||||||||||||||||| |||||||||| ||| || ||||| ||||||||||| Sbjct: 120125 agaacaccatgaagtgggcagaatcaaatggctgcaagggttcttttgctgaaatatgca 120066 Query: 343 aatctgaaggccttaaagagcatatccttaaagagct 379 | |||||||||||||||||||||||||| |||||||| Sbjct: 120065 agtctgaaggccttaaagagcatatcctgaaagagct 120029 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 79 caggagacattggagagatgaccccggatggaatcctgaaggttatcgaccggaagaaga 138 |||| |||||||||||||||| | | ||||||||||||||||| || ||||| ||||| | Sbjct: 120425 caggtgacattggagagatgaactcagatggaatcctgaaggtaattgaccgaaagaaaa 120366 Query: 139 acatatttaagctatcgcaaggggagtatgtcgcagttgagtatctggagaaagtatatg 198 | ||||| ||| | || |||||||||||||| |||||||| || |||||||||||||||| Sbjct: 120365 atatattcaagttgtcacaaggggagtatgttgcagttgaatacctggagaaagtatatg 120306 Query: 199 tcttccctccaa 210 | |||||||||| Sbjct: 120305 ttttccctccaa 120294 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 403 agctacgaggtttcgagtacatcaaaggtgtaatgttggacccggtaccttttgacattg 462 ||||||| || || ||||| ||||||||||||| |||||||| | ||||||||| ||| Sbjct: 119792 agctacggggatttgagtatgtcaaaggtgtaatattggaccctattccttttgaccttg 119733 Query: 463 aaagggatttggtcactgcaacaatgaagaagagaagaaactacatgctaaagtatta 520 ||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||| Sbjct: 119732 aaagggatttggtgactgcaacaatgaaaaagaaaagaaacaacatgctaaaatatta 119675 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 24 tactacaaaaatcctgagctcacaaacgaggtcatggttgatggatggtttcatacagg 82 ||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 120554 tactataaaaatcctgagctcacgaatgaggtcatggctgatggatggtttcacacagg 120496 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 523 agcctgagattgataaagtatacaaaacattggagggtcagagggctgcgagcaaagcaa 582 ||||||||||||| ||||||||| ||| | |||||| ||||||| ||| |||| ||| Sbjct: 119563 agcctgagattgagaaagtataccaaaaactggaggaacagagggttgccgccaaatcaa 119504 Query: 583 agtaaag 589 ||||||| Sbjct: 119503 agtaaag 119497
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 184 bits (93), Expect = 2e-43 Identities = 141/157 (89%) Strand = Plus / Minus Query: 223 tctgggtgtacggggacagctacaaatcaatgttagtggcagtagttaacccacatgaag 282 ||||||| || |||||||||| || |||||||||||||||||||||||| |||||||||| Sbjct: 1807456 tctgggtatatggggacagcttcagatcaatgttagtggcagtagttaatccacatgaag 1807397 Query: 283 aaaacaccatgaagtgggcagggtcaaatggctacaaaggctctttcagtgaaatatgca 342 | ||||||||||||||||||| |||||||||| ||| || ||||| ||||||||||| Sbjct: 1807396 agaacaccatgaagtgggcagaatcaaatggctgcaagggttcttttgctgaaatatgca 1807337 Query: 343 aatctgaaggccttaaagagcatatccttaaagagct 379 | |||||||||||||||||||||||||| |||||||| Sbjct: 1807336 agtctgaaggccttaaagagcatatcctgaaagagct 1807300 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 79 caggagacattggagagatgaccccggatggaatcctgaaggttatcgaccggaagaaga 138 |||| |||||||||||||||| | | ||||||||||||||||| || ||||| ||||| | Sbjct: 1807696 caggtgacattggagagatgaactcagatggaatcctgaaggtaattgaccgaaagaaaa 1807637 Query: 139 acatatttaagctatcgcaaggggagtatgtcgcagttgagtatctggagaaagtatatg 198 | ||||| ||| | || |||||||||||||| |||||||| || |||||||||||||||| Sbjct: 1807636 atatattcaagttgtcacaaggggagtatgttgcagttgaatacctggagaaagtatatg 1807577 Query: 199 tcttccctccaa 210 | |||||||||| Sbjct: 1807576 ttttccctccaa 1807565 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 403 agctacgaggtttcgagtacatcaaaggtgtaatgttggacccggtaccttttgacattg 462 ||||||| || || ||||| ||||||||||||| |||||||| | ||||||||| ||| Sbjct: 1807063 agctacggggatttgagtatgtcaaaggtgtaatattggaccctattccttttgaccttg 1807004 Query: 463 aaagggatttggtcactgcaacaatgaagaagagaagaaactacatgctaaagtatta 520 ||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||| Sbjct: 1807003 aaagggatttggtgactgcaacaatgaaaaagaaaagaaacaacatgctaaaatatta 1806946 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 24 tactacaaaaatcctgagctcacaaacgaggtcatggttgatggatggtttcatacagg 82 ||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 1807825 tactataaaaatcctgagctcacgaatgaggtcatggctgatggatggtttcacacagg 1807767 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 523 agcctgagattgataaagtatacaaaacattggagggtcagagggctgcgagcaaagcaa 582 ||||||||||||| ||||||||| ||| | |||||| ||||||| ||| |||| ||| Sbjct: 1806834 agcctgagattgagaaagtataccaaaaactggaggaacagagggttgccgccaaatcaa 1806775 Query: 583 agtaaag 589 ||||||| Sbjct: 1806774 agtaaag 1806768 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 catgaagaaaacaccatgaa 295 |||||||||||||||||||| Sbjct: 26444627 catgaagaaaacaccatgaa 26444608
>gb|AY110525.1| Zea mays CL10194_1 mRNA sequence Length = 729 Score = 153 bits (77), Expect = 8e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 292 tgaagtgggcagggtcaaatggctacaaaggctctttcagtgaaatatgcaaatctgaag 351 |||||||||||| ||| ||||||||||| || ||||| |||||| |||||| ||||| Sbjct: 27 tgaagtgggcagagtccaatggctacaagggttcttttgatgaaatctgcaaacttgaag 86 Query: 352 gccttaaagagcatatccttaaagagctcgcagcggctgcacagaagaacaagctacgag 411 | || |||||| | ||||| |||||||| ||||| | ||| ||||||||||||||||||| Sbjct: 87 gactcaaagagtacatcctgaaagagctggcagccgttgcgcagaagaacaagctacgag 146 Query: 412 gtttcgagtacatcaaaggtgtaatgttggacccggtaccttttgacattgaaagggatt 471 | ||||||||||||||||| ||| ||||||| || || ||||||||||| || ||||||| Sbjct: 147 gcttcgagtacatcaaaggcgtagtgttggatcctgtgccttttgacatcgagagggatt 206 Query: 472 tggtcactg 480 |||| |||| Sbjct: 207 tggtgactg 215
>dbj|AK060660.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A12, full insert sequence Length = 266 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 497 aagaaactacatgctaaagtattatcagcctgagattgataaagtatacaaaacattgga 556 ||||||| |||||||||| ||||| ||||||||||||| ||||||||| ||| | |||| Sbjct: 2 aagaaacaacatgctaaaatattacaagcctgagattgagaaagtataccaaaaactgga 61 Query: 557 gggtcagagggctgcgagcaaagcaaagtaaag 589 || ||||||| ||| |||| |||||||||| Sbjct: 62 ggaacagagggttgccgccaaatcaaagtaaag 94
>gb|DQ174260.1| Gossypium hirsutum ACS-like protein (ACS2) mRNA, complete cds Length = 2296 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 42 ctcacaaacgaggtcatggttgatggatggtttcatacaggagacattggagagatgacc 101 ||||| || ||||||||| ||||||| |||||||| ||||| || ||||| ||| | Sbjct: 1462 ctcaccaaggaggtcatgattgatgggtggtttcacacaggggatattggtgagtggcaa 1521 Query: 102 ccggatggaatcctgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggg 161 || |||||| |||| ||||| || || ||||||||||| |||||||| || |||||| Sbjct: 1522 ccaaatggaagtatgaaagttattgatcgaaagaagaacatctttaagctttcacaaggg 1581 Query: 162 gagtatgtcgcagttgagtatctggagaa 190 || ||||| || |||||| | |||||||| Sbjct: 1582 gaatatgttgctgttgagaacctggagaa 1610
>gb|AC135465.23| Medicago truncatula clone mth2-24h22, complete sequence Length = 109043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 453 tttgacattgaaagggatttggtcactgcaacaatgaagaagagaagaaactacatgcta 512 ||||| || ||||| || ||||| || |||||| |||| |||||||||||| | ||||| Sbjct: 75931 tttgatatggaaagagacttggtgacagcaacattgaaaaagagaagaaacaatatgctc 75990 Query: 513 aagtattatcag 524 |||||||||||| Sbjct: 75991 aagtattatcag 76002
>gb|DQ174259.1| Gossypium hirsutum ACS-like protein (ACS1) mRNA, complete cds Length = 2196 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcag 174 ||||| |||| || |||||||||||||| |||||||| || ||||| || ||||| || | Sbjct: 1532 tgaagattattgatcggaagaagaacatttttaagctttcacaaggtgaatatgttgctg 1591 Query: 175 ttgagtatctggagaa 190 ||||| | |||||||| Sbjct: 1592 ttgagaacctggagaa 1607
>ref|NM_192053.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1704 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattgg 91 |||||||||||||| |||||||||||||| Sbjct: 1207 gatggatggtttcacacaggagacattgg 1235
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 123 atcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagt 175 |||||| | ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 94844 atcgacagaaagaagaacattttcaagctgtcccaaggggagtatgtagcagt 94896
>emb|CT033771.1| Medicago truncatula chromosome 5 clone mth2-15i14, COMPLETE SEQUENCE Length = 116146 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 42 ctcacaaacgaggtcatggttgatggatggtttcatacagg 82 |||||||| ||||| |||||||||||||||| |||||||| Sbjct: 27163 ctcacaaaagaggttctggttgatggatggttccatacagg 27203 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcag 174 ||||| |||| || ||||||||||| ||||| ||||| || ||||| || ||||| || | Sbjct: 40357 tgaagattattgatcggaagaagaatatattcaagctttcacaaggagaatatgttgccg 40416 Query: 175 ttga 178 |||| Sbjct: 40417 ttga 40420 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcag 174 ||||| |||| || ||||||||||| ||||| ||||| || ||||| || ||||| || | Sbjct: 27342 tgaagattattgatcggaagaagaatatattcaagctttcccaaggagaatatgttgccg 27401 Query: 175 ttga 178 |||| Sbjct: 27402 ttga 27405
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 42 ctcacaaacgaggtcatggttgatggatggtttcatacagg 82 |||||||| ||||| |||||||||||||||| |||||||| Sbjct: 113100 ctcacaaaagaggttctggttgatggatggttccatacagg 113140 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcag 174 ||||| |||| || ||||||||||| ||||| ||||| || ||||| || ||||| || | Sbjct: 113279 tgaagattattgatcggaagaagaatatattcaagctttcccaaggagaatatgttgccg 113338 Query: 175 ttga 178 |||| Sbjct: 113339 ttga 113342
>emb|CR859937.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1820 (from clone DKFZp469F1820) Length = 3696 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagct 151 ||||| ||||||||||||| ||| ||||||||||||| Sbjct: 1708 tgaagattatcgaccggaaaaagcacatatttaagct 1744
>emb|CR858879.1| Pongo pygmaeus mRNA; cDNA DKFZp469I0926 (from clone DKFZp469I0926) Length = 3793 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagct 151 ||||| ||||||||||||| ||| ||||||||||||| Sbjct: 1801 tgaagattatcgaccggaaaaagcacatatttaagct 1837
>emb|CR857134.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0221 (from clone DKFZp469L0221) Length = 3568 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 115 tgaaggttatcgaccggaagaagaacatatttaagct 151 ||||| ||||||||||||| ||| ||||||||||||| Sbjct: 1575 tgaagattatcgaccggaaaaagcacatatttaagct 1611
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 123 atcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagt 175 |||||| | ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 19917777 atcgacagaaagaagaacattttcaagctgtcccaaggggagtatgtagcagt 19917829
>emb|AJ006025.1|CAR6025 Cicer arietinum mRNA for acyl-coA synthetase, partial Length = 802 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 106 atggaatcctgaaggttatcgaccggaagaagaacatatttaagctatcgcaaggggagt 165 |||||| | ||||| |||| ||||||||||| |||||||| ||||| || ||||| || | Sbjct: 24 atggaagcatgaagattattgaccggaagaaaaacatattcaagctttcacaaggagaat 83 Query: 166 atgtcgcagttga 178 |||| || ||||| Sbjct: 84 atgttgccgttga 96
>dbj|AK109777.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B09, full insert sequence Length = 2272 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 123 atcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagt 175 |||||| | ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 1641 atcgacagaaagaagaacattttcaagctgtcccaaggggagtatgtagcagt 1693
>dbj|AK101149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A14, full insert sequence Length = 2372 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattgg 91 |||||||||||||| |||||||||||||| Sbjct: 1575 gatggatggtttcacacaggagacattgg 1603
>dbj|AK066286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065D12, full insert sequence Length = 2544 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattgg 91 |||||||||||||| |||||||||||||| Sbjct: 1672 gatggatggtttcacacaggagacattgg 1700
>gb|AY107541.1| Zea mays PCO126911 mRNA sequence Length = 1353 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 123 atcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||| | ||||||||||| || ||||| || || ||||||||||| ||||||||| Sbjct: 687 atcgacagaaagaagaacatcttcaagctgtcccagggggagtatgtggcagttgag 743
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 123 atcgaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagt 175 |||||| | ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 20202756 atcgacagaaagaagaacattttcaagctgtcccaaggggagtatgtagcagt 20202808
>ref|XM_517555.1| PREDICTED: Pan troglodytes similar to acyl-CoA synthetase long-chain family member 1; long-chain acyl-CoA synthetase 2; fatty-acid-Coenzyme A ligase, long-chain 2; palmitoyl-CoA ligase 2; long-chain acyl-CoA synthetase 1; paltimoyl-CoA ligase 1; fatty-acid-Coenzyme A ligase,... (LOC461631), mRNA Length = 2233 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1791 ttatcgaccggaaaaagcacatatttaagct 1821
>gb|BC026290.1| Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone IMAGE:4607371), partial cds Length = 3178 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1180 ttatcgaccggaaaaagcacatatttaagct 1210
>gb|BC050073.1| Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA (cDNA clone MGC:50988 IMAGE:5267238), complete cds Length = 2347 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1787 ttatcgaccggaaaaagcacatatttaagct 1817
>dbj|AK096117.1| Homo sapiens cDNA FLJ38798 fis, clone LIVER2005028, highly similar to LONG-CHAIN-FATTY-ACID--COA LIGASE 2 (EC 6.2.1.3) Length = 2409 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 443 ttatcgaccggaaaaagcacatatttaagct 473
>emb|CR598751.1| full-length cDNA clone CS0DF036YG06 of Fetal brain of Homo sapiens (human) Length = 2153 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 205 ttatcgaccggaaaaagcacatatttaagct 235
>emb|CR597120.1| full-length cDNA clone CS0DJ004YA05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2203 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1689 ttatcgaccggaaaaagcacatatttaagct 1719
>gb|AC084871.4| Homo sapiens BAC clone RP11-701P16 from 4, complete sequence Length = 203726 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 2879 ttatcgaccggaaaaagcacatatttaagct 2849
>dbj|AK067776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K02, full insert sequence Length = 2242 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 61 ttgatggatggtttcatacaggagacattgg 91 ||||||||||||| ||||| ||||||||||| Sbjct: 1546 ttgatggatggttccatactggagacattgg 1576
>ref|NM_001995.2| Homo sapiens acyl-CoA synthetase long-chain family member 1 (ACSL1), mRNA Length = 3822 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1833 ttatcgaccggaaaaagcacatatttaagct 1863
>gb|L09229.1|HUMFACAL Human long-chain acyl-coenzyme A synthetase (FACL1) mRNA, complete cds Length = 3188 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1731 ttatcgaccggaaaaagcacatatttaagct 1761
>dbj|D10040.1|HUMLCACS Homo sapiens mRNA for long-chain acyl-CoA synthetase, complete cds Length = 3634 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 ttatcgaccggaagaagaacatatttaagct 151 ||||||||||||| ||| ||||||||||||| Sbjct: 1668 ttatcgaccggaaaaagcacatatttaagct 1698
>ref|NM_117173.1| Arabidopsis thaliana catalytic AT4G11030 mRNA, complete cds Length = 2001 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 126 gaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||||| |||||||| || || || ||||||| ||||||||||| |||||| Sbjct: 1546 gaccggaaaaagaacatcttcaaactcgcgcaaggagagtatgtcgctgttgag 1599
>gb|AC152121.2| Pichia stipitis clone JGIAHYZ-9D12, complete sequence Length = 37764 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 tggtttcatacaggagacattg 90 |||||||||||||||||||||| Sbjct: 15716 tggtttcatacaggagacattg 15737
>ref|XM_543222.2| PREDICTED: Canis familiaris hypothetical LOC486096 (LOC486096), mRNA Length = 2379 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 agtatctggagaaagtatatgt 199 |||||||||||||||||||||| Sbjct: 381 agtatctggagaaagtatatgt 402
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30 Length = 198136 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 126 gaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||||| |||||||| || || || ||||||| ||||||||||| |||||| Sbjct: 178814 gaccggaaaaagaacatcttcaaactcgcgcaaggagagtatgtcgctgttgag 178867
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 126 gaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||||| |||||||| || || || ||||||| ||||||||||| |||||| Sbjct: 13211 gaccggaaaaagaacatcttcaaactcgcgcaaggagagtatgtcgctgttgag 13264
>gb|AF503755.1| Arabidopsis thaliana long chain acyl-CoA synthetase 5 (LACS5) mRNA, complete cds Length = 2001 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 126 gaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||||| |||||||| || || || ||||||| ||||||||||| |||||| Sbjct: 1546 gaccggaaaaagaacatcttcaaactcgcgcaaggagagtatgtcgctgttgag 1599
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 Length = 103673 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 126 gaccggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttgag 179 |||||||| |||||||| || || || ||||||| ||||||||||| |||||| Sbjct: 5935 gaccggaaaaagaacatcttcaaactcgcgcaaggagagtatgtcgctgttgag 5882
>dbj|AP004492.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025a, complete sequence Length = 51575 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 atggttgatggatggtttcatacagg 82 ||||||||||||||||| |||||||| Sbjct: 24536 atggttgatggatggttccatacagg 24511 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Minus Query: 129 cggaagaagaacatatttaagctatcgcaaggggagtatgtcgcagttga 178 ||||||||||| ||||||||||| || ||||| || ||||| || ||||| Sbjct: 24199 cggaagaagaatatatttaagctttcacaaggagaatatgttgctgttga 24150
>gb|AC099468.9| Rattus norvegicus 1 BAC CH230-37P5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 212177 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 572 gagcaaagcaaagtaaagctatgtg 596 |||||||||||||||||||| |||| Sbjct: 115307 gagcaaagcaaagtaaagctttgtg 115331
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 ttttgacattgaaagggatttggtc 476 |||||||||||||||||||| |||| Sbjct: 97328 ttttgacattgaaagggattgggtc 97304
>ref|NM_001011069.1| Xenopus tropicalis hypothetical LOC496479 (LOC496479), mRNA Length = 2535 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 130 ggaagaagaacatatttaagctatcgcaaggggagta 166 |||||||||||||||||||| | |||| |||||||| Sbjct: 1716 ggaagaagaacatatttaagttggcgcagggggagta 1752
>gb|BC084450.1| Xenopus tropicalis hypothetical LOC496479, mRNA (cDNA clone MGC:89009 IMAGE:7004438), complete cds Length = 2535 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 130 ggaagaagaacatatttaagctatcgcaaggggagta 166 |||||||||||||||||||| | |||| |||||||| Sbjct: 1716 ggaagaagaacatatttaagttggcgcagggggagta 1752
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 ttttgacattgaaagggatttggtc 476 |||||||||||||||||||| |||| Sbjct: 10244 ttttgacattgaaagggattgggtc 10220
>dbj|AP004629.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07I01b, TM0091b, complete sequence Length = 59720 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 tggttgatggatggtttcatacagg 82 |||||||||| |||||||||||||| Sbjct: 29370 tggttgatggttggtttcatacagg 29394
>ref|NM_103833.3| Arabidopsis thaliana LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) AT1G49430 (LACS2) mRNA, complete cds Length = 2326 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1630 gatggatggttccacacaggagatattggaga 1661
>ref|NM_122642.3| Arabidopsis thaliana LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7); catalytic AT5G27600 (LACS7) mRNA, complete cds Length = 2313 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaagaagaacatatttaag 149 |||||||||||||||||||| Sbjct: 1643 ggaagaagaacatatttaag 1662
>ref|XM_467636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1031 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 acaatgaagaagagaagaaa 502 |||||||||||||||||||| Sbjct: 991 acaatgaagaagagaagaaa 1010
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 caatgaagaagagaagaaac 503 |||||||||||||||||||| Sbjct: 21737 caatgaagaagagaagaaac 21718
>gb|AY730337.1| Solanum tuberosum strain P6/210 clone BAC BA27c1, complete sequence Length = 91283 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 caatgaagaagagaagaaac 503 |||||||||||||||||||| Sbjct: 35171 caatgaagaagagaagaaac 35190
>ref|XM_421026.1| PREDICTED: Gallus gallus insulin-like growth factor 2 (IGF2), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 1771 aagagctcgcagcggctgca 1790
>gb|AY808357.1| Schistosoma japonicum SJCHGC08718 protein mRNA, partial cds Length = 743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 agttaacccacatgaagaaa 285 |||||||||||||||||||| Sbjct: 277 agttaacccacatgaagaaa 296
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 catgaagaaaacaccatgaa 295 |||||||||||||||||||| Sbjct: 89318 catgaagaaaacaccatgaa 89299
>gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence Length = 215278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cagggtcaaatggctacaaa 320 |||||||||||||||||||| Sbjct: 101507 cagggtcaaatggctacaaa 101488
>gb|AC156564.3| Mus musculus BAC clone RP24-81G20 from chromosome 8, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 agcaaagtaaagctatgtgt 597 |||||||||||||||||||| Sbjct: 159881 agcaaagtaaagctatgtgt 159862
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 451 cttttgacattgaaagggatttggtcac 478 |||||||||||||||| ||||| ||||| Sbjct: 85963 cttttgacattgaaagagattttgtcac 85990
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gataaagtatacaaaacatt 553 |||||||||||||||||||| Sbjct: 425672 gataaagtatacaaaacatt 425653
>emb|AL162613.22| Human DNA sequence from clone RP11-182C2 on chromosome 10 Contains the 5' end of the ADD3 gene for adducin 3 (gamma) and a CpG island, complete sequence Length = 79949 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 accttttgacattgaaaggg 468 |||||||||||||||||||| Sbjct: 20307 accttttgacattgaaaggg 20326
>emb|X93347.1|GGMITG Gorilla gorilla gorilla mitochondrial DNA. complete genome Length = 16412 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 aagctatgtgttttgttagg 606 |||||||||||||||||||| Sbjct: 10958 aagctatgtgttttgttagg 10939
>gb|AY065424.1| Arabidopsis thaliana putative acyl CoA synthetase (At1g49430) mRNA, complete cds Length = 2317 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1630 gatggatggttccacacaggagatattggaga 1661
>emb|AL731800.11| Mouse DNA sequence from clone RP23-358E7 on chromosome 11 Contains the gene for a novel protein, complete sequence Length = 204888 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aagaacatatttaagctatc 154 |||||||||||||||||||| Sbjct: 169186 aagaacatatttaagctatc 169167
>gb|AF503757.1| Arabidopsis thaliana long chain acyl-CoA synthetase 7 (LACS7) mRNA, complete cds Length = 2103 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaagaagaacatatttaag 149 |||||||||||||||||||| Sbjct: 1643 ggaagaagaacatatttaag 1662
>gb|AF503752.1| Arabidopsis thaliana long chain acyl-CoA synthetase 2 (LACS2) mRNA, complete cds Length = 1998 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1486 gatggatggttccacacaggagatattggaga 1517
>gb|AC117522.2| Homo sapiens chromosome 5 clone RP11-1072N2, complete sequence Length = 170219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gtcaaatggctacaaaggct 324 |||||||||||||||||||| Sbjct: 86341 gtcaaatggctacaaaggct 86360
>gb|AY094420.1| Arabidopsis thaliana At1g49430/F13F21_14 mRNA, complete cds Length = 2233 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1567 gatggatggttccacacaggagatattggaga 1598
>gb|AC068931.6| Homo sapiens chromosome 8, clone RP11-650B11, complete sequence Length = 101474 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 gataaagtatacaaaacatt 553 |||||||||||||||||||| Sbjct: 31642 gataaagtatacaaaacatt 31661
>gb|AC015711.11| Homo sapiens, clone RP11-47G3, complete sequence Length = 172676 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 agcaaagtaaagctatgtgttttg 601 ||||||| |||||||||||||||| Sbjct: 163905 agcaaagcaaagctatgtgttttg 163928
>gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, complete sequence Length = 177027 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aaaaatcctgagctcacaaa 49 |||||||||||||||||||| Sbjct: 171699 aaaaatcctgagctcacaaa 171680
>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence Length = 185255 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 agcaaagtaaagctatgtgttttg 601 ||||||| |||||||||||||||| Sbjct: 70967 agcaaagcaaagctatgtgttttg 70990
>ref|XM_695344.1| PREDICTED: Danio rerio similar to Long-chain-fatty-acid--CoA ligase 6 (Long-chain acyl-CoA synthetase 6) (LACS 6) (LOC571726), partial mRNA Length = 992 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 114 ctgaaggttatcgaccggaagaagaacatatttaag 149 |||||| | ||||||||||||||| |||| |||||| Sbjct: 550 ctgaagatcatcgaccggaagaagcacatctttaag 585
>gb|AY829236.1| Meleagris gallopavo insulin-like growth factor-II precursor (IGF-II) mRNA, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 659 aagagctcgcagcggctgca 678
>gb|AC009772.14| Homo sapiens 12 BAC RP11-372P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atggatggtttcatacagga 83 |||||||||||||||||||| Sbjct: 43746 atggatggtttcatacagga 43765
>gb|S82962.1|S82960S2 prepro-insulin-like growth factor-II [chickens, Genomic, 1513 nt, segment 2 of 2] Length = 1513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 977 aagagctcgcagcggctgca 996
>gb|AY267181.1| Gallus gallus insulin-like growth factor 2 (IGF2) mRNA, partial cds Length = 552 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 349 aagagctcgcagcggctgca 368
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gataaagtatacaaaacatt 553 |||||||||||||||||||| Sbjct: 425672 gataaagtatacaaaacatt 425653
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 acaatgaagaagagaagaaa 502 |||||||||||||||||||| Sbjct: 30558386 acaatgaagaagagaagaaa 30558367
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agtagttaacccacatgaag 282 |||||||||||||||||||| Sbjct: 25288400 agtagttaacccacatgaag 25288381
>emb|BX817705.1|CNS0AAWU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 733 gatggatggttccacacaggagatattggaga 764
>emb|BX816967.1|CNS0AAKX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2150 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1515 gatggatggttccacacaggagatattggaga 1546
>gb|AF218827.1|AF218827 Gallus gallus insulin-like growth factor-II gene, partial cds Length = 1492 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 969 aagagctcgcagcggctgca 988
>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158C05 Length = 145514 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agtagttaacccacatgaag 282 |||||||||||||||||||| Sbjct: 85444 agtagttaacccacatgaag 85425
>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 138171 aagagctcgcagcggctgca 138190
>dbj|AP003795.2| Gallus gallus genomic DNA, chromosome 5, clone:192C9, complete sequence Length = 187259 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 aagagctcgcagcggctgca 392 |||||||||||||||||||| Sbjct: 16396 aagagctcgcagcggctgca 16415
>gb|AC016041.5|AC016041 Genomic sequence for Arabidopsis thaliana BAC F27J15 from chromosome I, complete sequence Length = 119091 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ttttgacattgaaagggatt 471 |||||||||||||||||||| Sbjct: 60009 ttttgacattgaaagggatt 60028
>ref|XM_233365.3| PREDICTED: Rattus norvegicus similar to hypothetical protein A430070M19 (LOC313485), mRNA Length = 2685 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 atcaaaggtgtaatgttgga 442 |||||||||||||||||||| Sbjct: 1585 atcaaaggtgtaatgttgga 1604
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 acaatgaagaagagaagaaa 502 |||||||||||||||||||| Sbjct: 70394 acaatgaagaagagaagaaa 70375
>dbj|AK108709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A10, full insert sequence Length = 1031 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 acaatgaagaagagaagaaa 502 |||||||||||||||||||| Sbjct: 991 acaatgaagaagagaagaaa 1010
>gb|AC024750.1| Caenorhabditis elegans cosmid Y17G9A, complete sequence Length = 41335 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 ttgataaagtatacaaaacattgg 555 |||| ||||||||||||||||||| Sbjct: 12111 ttgaaaaagtatacaaaacattgg 12134
>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17, complete sequence Length = 237313 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ttgataaagtatacaaaaca 551 |||||||||||||||||||| Sbjct: 145386 ttgataaagtatacaaaaca 145367
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaagaagaacatatttaag 149 |||||||||||||||||||| Sbjct: 55263 ggaagaagaacatatttaag 55282
>gb|BT001970.1| Arabidopsis thaliana clone U18235 putative acyl CoA synthetase (At1g49430) mRNA, complete cds Length = 2029 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 63 gatggatggtttcatacaggagacattggaga 94 ||||||||||| || |||||||| |||||||| Sbjct: 1486 gatggatggttccacacaggagatattggaga 1517
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 tacatcaaaggtgtaatgttggac 443 |||||||||||| ||||||||||| Sbjct: 779137 tacatcaaaggtttaatgttggac 779160
>dbj|D38114.1|GORMTC Gorilla gorilla mitochondrial DNA, comlete sequence Length = 16364 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 aagctatgtgttttgttagg 606 |||||||||||||||||||| Sbjct: 10956 aagctatgtgttttgttagg 10937 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,243,878 Number of Sequences: 3902068 Number of extensions: 6243878 Number of successful extensions: 128506 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128066 Number of HSP's gapped (non-prelim): 440 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)