ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 4e-11
2ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA 78 4e-11
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
4dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
5dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
6dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
7ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
8dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
9dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
10dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
11emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 44 0.55
12dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.55
13gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.55
14dbj|AB019513.1| Streptomyces coelicolor genes for alcohol dehydr... 44 0.55
15gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence 42 2.2
16gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin bi... 40 8.6
17gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 8.6
18gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 8.6
19gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.6
20gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.6
21gb|AE009136.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 8.6
22gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosom... 40 8.6
23gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-bind... 40 8.6
24gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome ... 40 8.6
25gb|AC131736.2| Mus musculus BAC clone RP23-104E2 from 18, comple... 40 8.6
26gb|AC007735.2| Homo sapiens BAC clone GS1-146D10 from 7, complet... 40 8.6
27gb|AC141324.1| Pan troglodytes BAC clone RP43-1G23 from 7, compl... 40 8.6
28gb|AC146217.2| Pan troglodytes BAC clone RP43-33E1 from 7, compl... 40 8.6
29gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome... 40 8.6
30emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chro... 40 8.6
31gb|U11851.1|MOUSGLUT8 Mus musculus glucose transporter (GLUT3) g... 40 8.6
32gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 8.6
33gb|DQ374429.1| Aspergillus niger strain CBS 513.88 putative endo... 40 8.6
34ref|NM_024641.2| Homo sapiens mannosidase, endo-alpha (MANEA), mRNA 40 8.6
35gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.6
36gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 8.6
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
38gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 8.6
39dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.6
40emb|AL663026.13| Mouse DNA sequence from clone RP23-224M19 on ch... 40 8.6
41emb|BX640869.1|HSM806986 Homo sapiens mRNA; cDNA DKFZp686H2266 (... 40 8.6
42dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
43dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
44dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
45dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
46gb|U66560.1|MAU66560 Mycobacterium avium EmbR (embR), EmbA (embA... 40 8.6
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
48emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.6
49gb|AC139112.4| Cercopithecus aethiops clone CH252-467C20, comple... 40 8.6 
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1
           mRNA
          Length = 1637

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 238 atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
           |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 750 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 808



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 527 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 572



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 180 gtacttcgcggccaccaaggcaaagatgat 209
           ||||||||||||||||||| ||||||||||
Sbjct: 671 gtacttcgcggccaccaagtcaaagatgat 700
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>ref|XM_467707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1637

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 238 atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
           |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 749 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 807



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 526 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 571



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 180 gtacttcgcggccaccaaggcaaagatgat 209
           ||||||||||||||||||| ||||||||||
Sbjct: 670 gtacttcgcggccaccaagtcaaagatgat 699
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 238      atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
                |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 30985046 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 30984988



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 36       gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
                |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 30985465 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 30985420



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 180      gtacttcgcggccaccaaggcaaagatgat 209
                ||||||||||||||||||| ||||||||||
Sbjct: 30985125 gtacttcgcggccaccaagtcaaagatgat 30985096



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 34       atgagcccgccggcgtacctgtcgctgac 62
                |||||||| ||||||||||||||||||||
Sbjct: 27176122 atgagcccaccggcgtacctgtcgctgac 27176094
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 238   atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
             |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 40002 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 39944



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 36    gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
             |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 40421 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 40376



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 180   gtacttcgcggccaccaaggcaaagatgat 209
             ||||||||||||||||||| ||||||||||
Sbjct: 40081 gtacttcgcggccaccaagtcaaagatgat 40052
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>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full
           insert sequence
          Length = 1637

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 238 atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
           |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 749 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 807



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 526 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 571



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 180 gtacttcgcggccaccaaggcaaagatgat 209
           ||||||||||||||||||| ||||||||||
Sbjct: 670 gtacttcgcggccaccaagtcaaagatgat 699
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>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full
           insert sequence
          Length = 1637

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 238 atcgacgcgctgctgtccaagtctctcttcctcattagcgacggcggcaatgacatgtt 296
           |||||||  |||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 750 atcgacgatctgctgtccaagtctctcttcctcatcagcgacggcggcaacgacctgtt 808



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 527 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 572



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 180 gtacttcgcggccaccaaggcaaagatgat 209
           ||||||||||||||||||| ||||||||||
Sbjct: 671 gtacttcgcggccaccaagtcaaagatgat 700
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>ref|XM_467708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 872

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 628 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 673
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>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full
           insert sequence
          Length = 888

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 36  gagcccgccggcgtacctgtcgctgacgccggagacgagcggtcag 81
           |||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 628 gagcccgccggcttacctgtcgctgacgccgcagacgagccgtcag 673
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 34    atgagcccgccggcgtacctgtcgctgac 62
             |||||||| ||||||||||||||||||||
Sbjct: 72571 atgagcccaccggcgtacctgtcgctgac 72543
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>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 34    atgagcccgccggcgtacctgtcgctgac 62
             |||||||| ||||||||||||||||||||
Sbjct: 26793 atgagcccaccggcgtacctgtcgctgac 26765
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 444    gcccatggtgcgggcggtctcc 465
              ||||||||||||||||||||||
Sbjct: 193560 gcccatggtgcgggcggtctcc 193581
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 231     caccgacatcgacgcgctgctg 252
               ||||||||||||||||||||||
Sbjct: 5590327 caccgacatcgacgcgctgctg 5590348
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 234     cgacatcgacgcgctgctgtcc 255
               ||||||||||||||||||||||
Sbjct: 2500059 cgacatcgacgcgctgctgtcc 2500080



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 231     caccgacatcgacgcgctgct 251
               |||||||||||||||||||||
Sbjct: 2835620 caccgacatcgacgcgctgct 2835600



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     acctgtcgctgacgccggag 69
              ||||||||||||||||||||
Sbjct: 242006 acctgtcgctgacgccggag 241987
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>dbj|AB019513.1| Streptomyces coelicolor genes for alcohol dehydrogenase and ABC
            transporter, complete cds
          Length = 4417

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 444  gcccatggtgcgggcggtctcc 465
            ||||||||||||||||||||||
Sbjct: 1687 gcccatggtgcgggcggtctcc 1708
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>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence
          Length = 1429

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                       
Query: 100 ggagtcaactacgccgctggtggatccggcatcctcgacatcacagggaattccgccctc 159
           ||||| |||| |||| |||  ||||| |||||||||||||  || ||||  |||  | ||
Sbjct: 467 ggagtgaacttcgcctctgcaggatcaggcatcctcgacacgacggggagctccatcatc 526

                                
Query: 160 ccgttgagcaagcaggtggag 180
           ||| |||||||||||||||||
Sbjct: 527 ccgctgagcaagcaggtggag 547
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>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene
           cluster, complete sequence
          Length = 75439

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 gcaccgacatcgacgcgctg 249
           ||||||||||||||||||||
Sbjct: 686 gcaccgacatcgacgcgctg 667
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 552    cgccgcgtcgctgcccggga 571
              ||||||||||||||||||||
Sbjct: 477799 cgccgcgtcgctgcccggga 477818
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 537     cgcgatggcggacctcgccg 556
               ||||||||||||||||||||
Sbjct: 1763799 cgcgatggcggacctcgccg 1763780
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 419     tcgatgtggcgcccatcggctgcg 442
               ||||||||||| ||||||||||||
Sbjct: 2167609 tcgatgtggcggccatcggctgcg 2167586
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     ccgacatcgacgcgctgctg 252
               ||||||||||||||||||||
Sbjct: 1735683 ccgacatcgacgcgctgctg 1735702
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>gb|AE009136.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 162
            of 256 of the complete sequence
          Length = 11206

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  tcgaggctgcaacggcttcg 496
            ||||||||||||||||||||
Sbjct: 6377 tcgaggctgcaacggcttcg 6396
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>gb|AC131715.3| Mus musculus BAC clone RP23-180N22 from chromosome 6, complete sequence
          Length = 180102

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   atgtttgaacacttcaagaa 311
             ||||||||||||||||||||
Sbjct: 19025 atgtttgaacacttcaagaa 19006
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>gb|AF314590.3| Bradyrhizobium japonicum putative cyclic NTP-binding protein gene,
            partial cds; LuxA-like protein, MDO-like protein, and
            AraC-like protein genes, complete cds; nap operon,
            complete sequence; exodeoxyribosylnuclease EdrN (edrN)
            genes, complete cds; and putative sensor protein gene,
            partial cds
          Length = 11020

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 231  caccgacatcgacgcgctgctgtc 254
            ||||||||||||| ||||||||||
Sbjct: 8334 caccgacatcgacacgctgctgtc 8357
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>gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome 18, complete sequence
          Length = 242533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 250    ctgtccaagtctctcttcctcatt 273
              ||||||||||||||||| ||||||
Sbjct: 200571 ctgtccaagtctctctttctcatt 200594
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>gb|AC131736.2| Mus musculus BAC clone RP23-104E2 from 18, complete sequence
          Length = 180201

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 250   ctgtccaagtctctcttcctcatt 273
             ||||||||||||||||| ||||||
Sbjct: 23474 ctgtccaagtctctctttctcatt 23497
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>gb|AC007735.2| Homo sapiens BAC clone GS1-146D10 from 7, complete sequence
          Length = 116220

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   actcatcccttctgcaaaga 350
             ||||||||||||||||||||
Sbjct: 95338 actcatcccttctgcaaaga 95319
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>gb|AC141324.1| Pan troglodytes BAC clone RP43-1G23 from 7, complete sequence
          Length = 173699

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   actcatcccttctgcaaaga 350
             ||||||||||||||||||||
Sbjct: 59399 actcatcccttctgcaaaga 59418
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>gb|AC146217.2| Pan troglodytes BAC clone RP43-33E1 from 7, complete sequence
          Length = 191426

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   actcatcccttctgcaaaga 350
             ||||||||||||||||||||
Sbjct: 94722 actcatcccttctgcaaaga 94703
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>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence
          Length = 234330

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    atgtttgaacacttcaagaa 311
              ||||||||||||||||||||
Sbjct: 133832 atgtttgaacacttcaagaa 133813
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>emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chromosome 6 Contains the
             gene for mandaselin (FLJ12838) and a CpG island, complete
             sequence
          Length = 105273

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   gctgtatgggctcggggcgcggcg 407
             ||||| ||||||||||||||||||
Sbjct: 66763 gctgtctgggctcggggcgcggcg 66786
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>gb|U11851.1|MOUSGLUT8 Mus musculus glucose transporter (GLUT3) gene, exon 8
          Length = 418

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 atgtttgaacacttcaagaa 311
           ||||||||||||||||||||
Sbjct: 21  atgtttgaacacttcaagaa 2
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 477     tcgaggctgcaacggcttcg 496
               ||||||||||||||||||||
Sbjct: 1798069 tcgaggctgcaacggcttcg 1798088
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>gb|DQ374429.1| Aspergillus niger strain CBS 513.88 putative endo-rhamnogalacturonase
            C (rhgC) gene, complete cds
          Length = 1888

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 447  catggtgcgggcggtctccc 466
            ||||||||||||||||||||
Sbjct: 1629 catggtgcgggcggtctccc 1648
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>ref|NM_024641.2| Homo sapiens mannosidase, endo-alpha (MANEA), mRNA
          Length = 4593

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 384 gctgtatgggctcggggcgcggcg 407
           ||||| ||||||||||||||||||
Sbjct: 4   gctgtctgggctcggggcgcggcg 27
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    ccgacatcgacgcgctgctg 252
              ||||||||||||||||||||
Sbjct: 821501 ccgacatcgacgcgctgctg 821520
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     accgacatcgacgcgctgct 251
               ||||||||||||||||||||
Sbjct: 1585820 accgacatcgacgcgctgct 1585801
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 36       gagcccgccggcgtacctgtcgctgacg 63
                |||||||||||||||||| || ||||||
Sbjct: 23332159 gagcccgccggcgtacctctccctgacg 23332132
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    gcaaagatgatagagggaag 218
              ||||||||||||||||||||
Sbjct: 362964 gcaaagatgatagagggaag 362945
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 231     caccgacatcgacgcgctgctgtc 254
               ||||||||||||| ||||||||||
Sbjct: 7755510 caccgacatcgacacgctgctgtc 7755533
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>emb|AL663026.13| Mouse DNA sequence from clone RP23-224M19 on chromosome X, complete
              sequence
          Length = 237481

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    acatgtttgaacacttcaag 309
              ||||||||||||||||||||
Sbjct: 123160 acatgtttgaacacttcaag 123141
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>emb|BX640869.1|HSM806986 Homo sapiens mRNA; cDNA DKFZp686H2266 (from clone DKFZp686H2266);
           complete cds
          Length = 4596

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 384 gctgtatgggctcggggcgcggcg 407
           ||||| ||||||||||||||||||
Sbjct: 5   gctgtctgggctcggggcgcggcg 28
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>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full
           insert sequence
          Length = 1582

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 36  gagcccgccggcgtacctgtcgctgacg 63
           |||||||||||||||||| || ||||||
Sbjct: 363 gagcccgccggcgtacctctccctgacg 390
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>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full
           insert sequence
          Length = 1741

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 36  gagcccgccggcgtacctgtcgctgacg 63
           |||||||||||||||||| || ||||||
Sbjct: 363 gagcccgccggcgtacctctccctgacg 390
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>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full
           insert sequence
          Length = 1637

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 36  gagcccgccggcgtacctgtcgctgacg 63
           |||||||||||||||||| || ||||||
Sbjct: 437 gagcccgccggcgtacctctccctgacg 464
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>dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C12, full
           insert sequence
          Length = 1328

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 36  gagcccgccggcgtacctgtcgctgacg 63
           |||||||||||||||||| || ||||||
Sbjct: 128 gagcccgccggcgtacctctccctgacg 155
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>gb|U66560.1|MAU66560 Mycobacterium avium EmbR (embR), EmbA (embA) and EmbB (embB) genes,
            complete cds
          Length = 7853

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   acctgtcgctgacgccggag 69
            ||||||||||||||||||||
Sbjct: 7411 acctgtcgctgacgccggag 7430
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 36       gagcccgccggcgtacctgtcgctgacg 63
                |||||||||||||||||| || ||||||
Sbjct: 23260350 gagcccgccggcgtacctctccctgacg 23260323
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 36     gagcccgccggcgtacctgtcgctgacg 63
              |||||||||||||||||| || ||||||
Sbjct: 145277 gagcccgccggcgtacctctccctgacg 145250
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>gb|AC139112.4| Cercopithecus aethiops clone CH252-467C20, complete sequence
          Length = 172237

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    gcaaagatgatagagggaag 218
              ||||||||||||||||||||
Sbjct: 149125 gcaaagatgatagagggaag 149106


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,587,204
Number of Sequences: 3902068
Number of extensions: 3587204
Number of successful extensions: 67974
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 66975
Number of HSP's gapped (non-prelim): 999
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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