ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14i22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown ... 480 e-132
2gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 480 e-132
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 480 e-132
4dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
5dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 480 e-132
7gb|AY110859.1| Zea mays CL41895_1 mRNA sequence 377 e-101
8emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p1... 58 3e-05
9ref|NM_126461.2| Arabidopsis thaliana unknown protein AT2G04280 ... 52 0.002
10gb|BT015416.1| Arabidopsis thaliana At2g04280 gene, complete cds 52 0.002
11gb|AY056207.1| Arabidopsis thaliana unknown protein (At2g04280) ... 52 0.002
12gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 ma... 52 0.002
13ref|XM_741429.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucan... 42 1.7
14ref|XM_329578.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
15ref|XM_957923.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
16gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Ho... 40 6.6
17gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome ... 40 6.6
18gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, comple... 40 6.6
19gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complet... 40 6.6
20emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch... 40 6.6
21gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, com... 40 6.6
22gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, compl... 40 6.6
23gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 ma... 40 6.6
24gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 40 6.6
25gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, com... 40 6.6
26gb|AC003686.1|AC003686 Homo sapiens 12q13.1 PAC RPCI1-90J4 (Rosw... 40 6.6
27emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on ch... 40 6.6

>ref|NM_196817.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0018F16.3), mRNA
          Length = 2157

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                        
Query: 5    gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
            ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 1174 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 1233

                                                                        
Query: 65   agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
            || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 1234 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 1293

                                                                        
Query: 125  actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
            ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 1294 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 1353

                                                                        
Query: 185  aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
            |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 1354 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 1413

                                                                        
Query: 245  gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
            |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 1414 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 1473

                                                                        
Query: 305  gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
            |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 1474 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 1533

                                                                        
Query: 365  gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
            |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 1534 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 1593

                                                                        
Query: 425  ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
            |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 1594 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 1653

              
Query: 485  ga 486
            ||
Sbjct: 1654 ga 1655



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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                         
Query: 5     gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
             ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 41580 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 41639

                                                                         
Query: 65    agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
             || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 41640 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 41699

                                                                         
Query: 125   actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
             ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 41700 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 41759

                                                                         
Query: 185   aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
             |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 41760 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 41819

                                                                         
Query: 245   gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
             |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 41820 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 41879

                                                                         
Query: 305   gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
             |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 41880 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 41939

                                                                         
Query: 365   gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
             |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 41940 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 41999

                                                                         
Query: 425   ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
             |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 42000 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 42059

               
Query: 485   ga 486
             ||
Sbjct: 42060 ga 42061



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                            
Query: 5        gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
                ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 16162691 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 16162750

                                                                            
Query: 65       agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
                || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 16162751 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 16162810

                                                                            
Query: 125      actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
                ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 16162811 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 16162870

                                                                            
Query: 185      aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
                |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 16162871 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 16162930

                                                                            
Query: 245      gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
                |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 16162931 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 16162990

                                                                            
Query: 305      gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
                |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 16162991 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 16163050

                                                                            
Query: 365      gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
                |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 16163051 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 16163110

                                                                            
Query: 425      ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
                |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 16163111 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 16163170

                  
Query: 485      ga 486
                ||
Sbjct: 16163171 ga 16163172



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>dbj|AK101916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071I02, full
            insert sequence
          Length = 2290

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                        
Query: 5    gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
            ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 1277 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 1336

                                                                        
Query: 65   agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
            || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 1337 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 1396

                                                                        
Query: 125  actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
            ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 1397 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 1456

                                                                        
Query: 185  aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
            |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 1457 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 1516

                                                                        
Query: 245  gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
            |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 1517 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 1576

                                                                        
Query: 305  gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
            |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 1577 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 1636

                                                                        
Query: 365  gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
            |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 1637 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 1696

                                                                        
Query: 425  ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
            |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 1697 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 1756

              
Query: 485  ga 486
            ||
Sbjct: 1757 ga 1758



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>dbj|AK102067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082F19, full
            insert sequence
          Length = 2230

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                        
Query: 5    gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
            ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 1217 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 1276

                                                                        
Query: 65   agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
            || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 1277 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 1336

                                                                        
Query: 125  actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
            ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 1337 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 1396

                                                                        
Query: 185  aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
            |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 1397 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 1456

                                                                        
Query: 245  gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
            |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 1457 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 1516

                                                                        
Query: 305  gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
            |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 1517 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 1576

                                                                        
Query: 365  gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
            |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 1577 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 1636

                                                                        
Query: 425  ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
            |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 1637 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 1696

              
Query: 485  ga 486
            ||
Sbjct: 1697 ga 1698



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  480 bits (242), Expect = e-132
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                            
Query: 5        gatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtgatcgaccag 64
                ||||| ||| |||||||||||||||||||| ||||| |||| ||||| || || ||||||
Sbjct: 16170932 gattttaggctctactttgattttgagcacttgaagcaatcagcatcggtcattgaccag 16170991

                                                                            
Query: 65       agtcagttctggacagactgggggaagtggcacaagaaggatcgactgaagaatcactat 124
                || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 16170992 agccagttctggacagattgggggaagtggcacaagaaggatagactgaagaatcactac 16171051

                                                                            
Query: 125      actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
                ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 16171052 actgaagacatcaaggtgaccccgatgcaacttcgtgacgtcaaggacacactgatcatg 16171111

                                                                            
Query: 185      aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
                |||||||||||| |||||||||| ||||||| |||||| ||||| || ||||||||||| 
Sbjct: 16171112 aggaagtttgggaatgttgagcctgataacttctggtctcgtgtatgtgagggtgagacg 16171171

                                                                            
Query: 245      gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
                |||||  ||||||| || |||||| |||| |||||||| ||||| || ||||||||||| 
Sbjct: 16171172 gaggcagtgatcaagcgcccatggtatttattgtggaaatcgcgtcgattgatggagatc 16171231

                                                                            
Query: 305      gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
                |||||||||||| ||||||| |||  |||||| || || ||  | ||||||||||| || 
Sbjct: 16171232 gtgtctgccatttcctcccggatggattgggactttgattcagtccatgttgtgaggggg 16171291

                                                                            
Query: 365      gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
                |||||||||||||||| |||| | |||||||| ||||||  |||||| || ||||| | |
Sbjct: 16171292 gagaaagcccagaacaaacagttgtggccaaatcttgatagagatacttctccagatagt 16171351

                                                                            
Query: 425      ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
                |||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||| ||
Sbjct: 16171352 ctccttacgacacttaatgataaggtcggtgctggccggcatttgtacattgcaaccaat 16171411

                  
Query: 485      ga 486
                ||
Sbjct: 16171412 ga 16171413



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>gb|AY110859.1| Zea mays CL41895_1 mRNA sequence
          Length = 888

 Score =  377 bits (190), Expect = e-101
 Identities = 319/362 (88%)
 Strand = Plus / Minus

                                                                       
Query: 125 actgaagacatcaaggtgacccccatgaaacttcgtgacgtcaaggacacgctgatcatg 184
           ||||||||||||| | ||||||| ||||||||||||||| ||||||||||  ||||||||
Sbjct: 874 actgaagacatcaggatgaccccaatgaaacttcgtgacatcaaggacacattgatcatg 815

                                                                       
Query: 185 aggaagtttgggcatgttgagccggataactactggtcacgtgtgtgcgagggtgagaca 244
           |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| 
Sbjct: 814 aggaagtttgggaatgttgagcctgataactattggtcacgtgtgtgcgagggtgagact 755

                                                                       
Query: 245 gaggccatgatcaaacggccatggcatttcttgtggaagtcgcgccgcttgatggagatt 304
           ||||  || ||||| || |||||||||||| ||||||| || || |||||||||||||||
Sbjct: 754 gagggaataatcaagcgcccatggcatttcctgtggaaatctcgtcgcttgatggagatt 695

                                                                       
Query: 305 gtgtctgccattgcctcccgaatgagttgggatttcgactcgatgcatgttgtgagagga 364
           || |||||||||||||| || ||||  ||||| || |||||| | |||||||| ||||| 
Sbjct: 694 gtatctgccattgcctcacggatgaactgggactttgactcggtccatgttgtcagaggg 635

                                                                       
Query: 365 gagaaagcccagaacacacagctttggccaaaccttgatgcagatacctcgccagaaaat 424
           |||||||| ||||||||||| |||||||||||||||||   ||||||||| ||||| | |
Sbjct: 634 gagaaagcgcagaacacacaactttggccaaaccttgacagagatacctcaccagacagt 575

                                                                       
Query: 425 ctccttacgacactcaatgataaggttggtgctggacggtatttgtacattgctaccgat 484
           ||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 574 ctccttatggcacttaatgataaggttggtgctggccggtatttgtacattgctaccaat 515

             
Query: 485 ga 486
           ||
Sbjct: 514 ga 513



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>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE
          Length = 111128

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 350   catgttgtgagaggagagaaagcccagaacacacagctttggccaaaccttgatgcagat 409
             ||||||||||||||||| || ||   ||||| | ||||||||||||| ||||||||| ||
Sbjct: 20699 catgttgtgagaggagaaaaggcgaggaacaaagagctttggccaaatcttgatgcacat 20758

                  
Query: 410   acctc 414
             |||||
Sbjct: 20759 acctc 20763



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 5     gatttcaggttctactttgattttgagcacctgaagga 42
             ||||| ||||| |||||||||||||||||  |||||||
Sbjct: 20354 gattttaggttttactttgattttgagcatttgaagga 20391



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>ref|NM_126461.2| Arabidopsis thaliana unknown protein AT2G04280 mRNA, complete cds
          Length = 2272

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 2    aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 55
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108



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>gb|BT015416.1| Arabidopsis thaliana At2g04280 gene, complete cds
          Length = 1707

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 2    aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 55
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 949  aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1002



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>gb|AY056207.1| Arabidopsis thaliana unknown protein (At2g04280) mRNA, complete cds
          Length = 2037

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 2    aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 55
            |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 1055 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 1108



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>gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 map RNS1, complete
             sequence
          Length = 81341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 2     aaggatttcaggttctactttgattttgagcacctgaaggaatctgcatctgtg 55
             |||||||||||||| ||||||||||| |||||  |||| ||| |||| ||||||
Sbjct: 44182 aaggatttcaggttttactttgatttcgagcatttgaaagaagctgcttctgtg 44235



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>ref|XM_741429.1| Aspergillus fumigatus Af293 exo-beta-1,3-glucanase (Afu4g03350)
            partial mRNA
          Length = 2340

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  cgtcaaggacacgctgatcat 183
            |||||||||||||||||||||
Sbjct: 1353 cgtcaaggacacgctgatcat 1373



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>ref|XM_329578.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial
            mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  gaagtttgggcatgttgagc 206
            ||||||||||||||||||||
Sbjct: 1090 gaagtttgggcatgttgagc 1071



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>ref|XM_957923.1| Neurospora crassa OR74A hypothetical protein (NCU08534.1) partial
            mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  gaagtttgggcatgttgagc 206
            ||||||||||||||||||||
Sbjct: 1090 gaagtttgggcatgttgagc 1071



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>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237199

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    agctttggccaaaccttgat 403
              ||||||||||||||||||||
Sbjct: 208177 agctttggccaaaccttgat 208196



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>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence
          Length = 221548

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   atggcatttcttgtggaagt 284
             ||||||||||||||||||||
Sbjct: 61723 atggcatttcttgtggaagt 61704



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>gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, complete sequence
          Length = 190798

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aggaagtttgggcatgttga 204
             ||||||||||||||||||||
Sbjct: 25687 aggaagtttgggcatgttga 25668



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>gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complete sequence
          Length = 144546

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    aggatttcaggttctacttt 22
            ||||||||||||||||||||
Sbjct: 9776 aggatttcaggttctacttt 9795



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>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete
              sequence
          Length = 129800

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    agacatcaaggtgaccccca 149
              ||||||||||||||||||||
Sbjct: 110930 agacatcaaggtgaccccca 110949



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>gb|AC158228.3| Mus musculus chromosome 5, clone RP23-118K12, complete sequence
          Length = 208055

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    tttgagcacctgaaggaatc 45
             ||||||||||||||||||||
Sbjct: 89841 tttgagcacctgaaggaatc 89860



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>gb|AC092711.14| Mus musculus chromosome 5, clone RP23-7D3, complete sequence
          Length = 191727

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     tttgagcacctgaaggaatc 45
              ||||||||||||||||||||
Sbjct: 132554 tttgagcacctgaaggaatc 132535



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>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete
             sequence
          Length = 103495

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atactgaagacatcaaggtg 142
             ||||||||||||||||||||
Sbjct: 17859 atactgaagacatcaaggtg 17878



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>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete sequence
          Length = 184560

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    aggaagtttgggcatgttga 204
              ||||||||||||||||||||
Sbjct: 172893 aggaagtttgggcatgttga 172874



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>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence
          Length = 226595

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  atggcatttcttgtggaagt 284
            ||||||||||||||||||||
Sbjct: 5349 atggcatttcttgtggaagt 5368



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>gb|AC003686.1|AC003686 Homo sapiens 12q13.1 PAC RPCI1-90J4 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 113457

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    attttgagcacctgaaggaa 43
             ||||||||||||||||||||
Sbjct: 94892 attttgagcacctgaaggaa 94873



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>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete
             sequence
          Length = 182829

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 356   gtgagaggagagaaagcccagaac 379
             |||||| |||||||||||||||||
Sbjct: 18295 gtgagatgagagaaagcccagaac 18318


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,940,563
Number of Sequences: 3902068
Number of extensions: 3940563
Number of successful extensions: 71689
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71593
Number of HSP's gapped (non-prelim): 96
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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