ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14i17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY055729.1| Physcomitrella patens cold acclimation protein WCOR413-like protein mRNA, complete cds Length = 950 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 138 tgaggaggatgaaggcggcaggcag 162 ||||||||||||||||||||||||| Sbjct: 484 tgaggaggatgaaggcggcaggcag 460
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 gggctagaacatgtagatgagg 110 |||||||||||||||||||||| Sbjct: 860347 gggctagaacatgtagatgagg 860368
>gb|AY894635.1| Macaca mulatta clone MMU10 NBPF gene, partial cds Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894634.1| Macaca mulatta clone MMU9 NBPF gene, partial cds Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894633.1| Macaca mulatta clone MMU7 NBPF gene, partial cds Length = 1161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894632.1| Macaca mulatta clone MMU8 NBPF gene, partial cds Length = 1161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894631.1| Macaca mulatta clone MMU6 NBPF gene, partial cds Length = 1161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894629.1| Macaca mulatta clone MMU3 NBPF gene, partial cds Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894628.1| Macaca mulatta clone MMU2 NBPF gene, partial cds Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894627.1| Macaca mulatta clone MMU1 NBPF gene, partial cds Length = 1164 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894626.1| Macaca mulatta clone MMU4 NBPF gene, partial cds Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894624.1| Macaca fascicularis clone MFA10 NBPF gene, partial cds Length = 1161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>gb|AY894621.1| Macaca fascicularis clone MFA8 NBPF gene, partial cds Length = 1162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 221 caggagctgaggaggatgaag 201
>gb|AY894619.1| Macaca fascicularis clone MFA4 NBPF gene, partial cds Length = 1161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 caggagctgaggaggatgaag 151 ||||||||||||||||||||| Sbjct: 219 caggagctgaggaggatgaag 199
>ref|NM_128814.2| Arabidopsis thaliana unknown protein AT2G32550 mRNA, complete cds Length = 1235 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 129 aggagctgaggaggatgaag 110
>gb|AY894615.1| Hylobates lar clone HYL8 NBPF gene, partial cds Length = 1163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894613.1| Hylobates lar clone HYL4 NBPF gene, partial cds Length = 1163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894612.1| Hylobates lar clone HYL7 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894610.1| Hylobates lar clone HYL1 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894609.1| Hylobates lar clone HYL5 NBPF gene, partial cds Length = 1161 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894608.1| Hylobates lar clone HYL9 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894605.1| Gorilla gorilla clone GGO10 NBPF gene, partial cds Length = 1163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894604.1| Gorilla gorilla clone GGO1 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894603.1| Gorilla gorilla clone GGO2 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894602.1| Gorilla gorilla clone GGO9 NBPF gene, partial cds Length = 1162 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 219 aggagctgaggaggatgaag 200
>gb|AY894601.1| Gorilla gorilla clone GGO6 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894598.1| Gorilla gorilla clone GGO3 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894597.1| Gorilla gorilla clone GGO4 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894596.1| Gorilla gorilla clone GGO5 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894595.1| Pan troglodytes clone PTR1 NBPF gene, partial cds Length = 1165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894594.1| Pan troglodytes clone PTR10 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894593.1| Pan troglodytes clone PTR7 NBPF gene, partial cds Length = 1165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894592.1| Pan troglodytes clone PTR9 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894591.1| Pan troglodytes clone PTR2 NBPF gene, partial cds Length = 1165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894590.1| Pan troglodytes clone PTR3 NBPF gene, partial cds Length = 1167 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894588.1| Pan troglodytes clone PTR5 NBPF gene, partial cds Length = 1165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894587.1| Pan troglodytes clone PTR6 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 218 aggagctgaggaggatgaag 199
>gb|AY894586.1| Pan troglodytes clone PTR8 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 219 aggagctgaggaggatgaag 200
>gb|AY894583.1| Homo sapiens clone HSA8 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894581.1| Homo sapiens clone HSA3 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894580.1| Homo sapiens clone HSA2 NBPF gene, partial cds Length = 1165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 219 aggagctgaggaggatgaag 200
>gb|AY894579.1| Homo sapiens clone HSA7 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894578.1| Homo sapiens clone HSA6 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894577.1| Homo sapiens clone HSA10 NBPF gene, partial cds Length = 1166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AY894576.1| Homo sapiens clone HSA1 NBPF gene, partial cds Length = 1164 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 220 aggagctgaggaggatgaag 201
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ttgtttgccatgttcttgta 502 |||||||||||||||||||| Sbjct: 407970 ttgtttgccatgttcttgta 407989
>gb|AF068720.1| Caenorhabditis elegans cosmid K02H11, complete sequence Length = 27223 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggatgaaggcggcaggcagg 163 |||||||||||||||||||| Sbjct: 21500 ggatgaaggcggcaggcagg 21481
>gb|AC129080.6| Mus musculus BAC clone RP24-226L20 from chromosome 5, complete sequence Length = 156781 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 atgaggcaaggaggaaggca 124 |||||||||||||||||||| Sbjct: 126374 atgaggcaaggaggaaggca 126393
>emb|CR853295.9| Human DNA sequence from clone WI2-3658N16 on chromosome 1, complete sequence Length = 38649 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 38154 aggagctgaggaggatgaag 38173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 31863 aggagctgaggaggatgaag 31882 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 25602 aggagctgaggaggatgaag 25621
>ref|XM_746313.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g14260) partial mRNA Length = 1500 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tggttcatccacaaaaaggg 426 |||||||||||||||||||| Sbjct: 493 tggttcatccacaaaaaggg 512
>gb|AY102546.1| Arabidopsis thaliana hypothetical protein (At2g32550/T26B15.11) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 129 aggagctgaggaggatgaag 110
>emb|CR936846.7| Zebrafish DNA sequence from clone DKEY-20N3 in linkage group 1, complete sequence Length = 80060 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gacattagaattgttgtttg 489 |||||||||||||||||||| Sbjct: 35656 gacattagaattgttgtttg 35637
>emb|BX546486.21| Human DNA sequence from clone RP11-89F3 on chromosome 1 Contains a profilin 1 (Pfn1) pseudogene, two novel genes and two CpG islands, complete sequence Length = 129370 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 25389 aggagctgaggaggatgaag 25370 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 19123 aggagctgaggaggatgaag 19104
>emb|BX842679.19| Human DNA sequence from clone XXyac-155B6 on chromosome 1 Contains a novel gene and a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene, a profilin 1 (PFN1) pseudogene, the gene for a novel protein similar to chromosome 19 open reading frame 27 (C19orf27) and two novel genes, complete sequence Length = 163898 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 65299 aggagctgaggaggatgaag 65318
>emb|AL954711.3| Human DNA sequence from clone RP11-666A1 on chromosome 1 Contains two novel pseudogenes, two novel genes, a profilin 1 (PFN1) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and three CpG islands, complete sequence Length = 172789 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 70745 aggagctgaggaggatgaag 70726
>emb|AL592307.36| Human DNA sequence from clone RP11-458D21 on chromosome 1 Contains the gene for a novel protein similar to Notch homolog 2 (Drosophila) NOTCH2, a novel gene and a CpG island, complete sequence Length = 204307 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 114946 aggagctgaggaggatgaag 114927 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 108654 aggagctgaggaggatgaag 108635
>emb|AL592492.10| Human DNA sequence from clone RP11-763B22 on chromosome 1 Contains a profilin (PFN1) pseudogene, three novel genes, two novel pseudogenes (FLJ39739), a cyclophilin-LC (COAS2) pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR), the 5' end of a myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3) pseudogene and two CpG islands, complete sequence Length = 158089 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 10043 aggagctgaggaggatgaag 10024
>emb|AL592284.10| Human DNA sequence from clone RP11-640M9 on chromosome 1 Contains a novel gene, the 5' end of a novel gene a profilin 1 (PFN1) pseudogene and a CpG island, complete sequence Length = 170669 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 167909 aggagctgaggaggatgaag 167890
>emb|AL359752.11| Human DNA sequence from clone RP5-1042I8 on chromosome 1p11-13.2 Contains the REG4 gene for regenerating islet-derived family member 4, a novel pseudogene, a profilin 1 (PFN1) pseudogene, the ADAM30 gene for a disintegrin and metalloproteinase domain 30 and the 3' end of the NOTCH2 gene for Notch homolog 2 (Drosophila), complete sequence Length = 137955 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 49154 aggagctgaggaggatgaag 49173
>emb|AL356004.9| Human DNA sequence from clone RP11-94I2 on chromosome 1 Contains the 3' end of the gene for a novel protein similar to putative G-protein coupled receptor SH120, the gene for a novel protein similar to PDZ domain containing 1 PDZK1, a novel gene, a phosphodiesterase 4D interacting protein (myomegalin) (PDE4DIP) pseudogene and three CpG islands, complete sequence Length = 166098 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 163607 aggagctgaggaggatgaag 163626
>emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chromosome 13 Contains the 3' end of the CDK8 gene for cyclin-dependent kinase 8, complete sequence Length = 144626 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 tgtgagttgagatctgttcc 575 |||||||||||||||||||| Sbjct: 17727 tgtgagttgagatctgttcc 17746
>emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and three CpG islands, complete sequence Length = 146141 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 137340 aggagctgaggaggatgaag 137321 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 131076 aggagctgaggaggatgaag 131057 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 124771 aggagctgaggaggatgaag 124752
>emb|AL138796.6| Human DNA sequence from clone RP4-791M13 on chromosome 1 Contains the 3' end of a novel gene and the 3' end of the PDE4DIP gene for phosphodiesterase 4D interacting protein (myomegalin), complete sequence Length = 120928 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 5519 aggagctgaggaggatgaag 5500
>emb|AL022240.8|HS328E19 Human DNA sequence from clone RP3-328E19 on chromosome 1q12-21.2 Contains the 5' end of a novel gene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, a novel pseudogene, the 3' end of a novel gene and a CpG island, complete sequence Length = 97619 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 94943 aggagctgaggaggatgaag 94962
>gb|AC073365.14| Homo sapiens 3 BAC RP11-479M14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179598 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaattgttgtttgccatgtt 496 |||||||||||||||||||| Sbjct: 55025 gaattgttgtttgccatgtt 55044
>emb|BX511041.14| Human DNA sequence from clone RP3-377D14 on chromosome 1, complete sequence Length = 78698 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 5506 aggagctgaggaggatgaag 5487
>gb|AC182462.3| Pan troglodytes BAC clone CH251-572M16 from chromosome 1, complete sequence Length = 158275 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 120811 aggagctgaggaggatgaag 120830
>dbj|AK098004.1| Homo sapiens cDNA FLJ40685 fis, clone THYMU2023943 Length = 1881 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 422 aggagctgaggaggatgaag 403
>gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 map TEn5, complete sequence Length = 78732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 39868 aggagctgaggaggatgaag 39849
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 785707 atactgcaggagctgaggag 785688
>gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, complete sequence Length = 163228 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gagtgtctggaggaaacctc 25 |||||||||||||||||||| Sbjct: 141468 gagtgtctggaggaaacctc 141487
>gb|AF356512.1|AF356512 Ehrlichia phagocytophila ankyrin (ank) gene, partial cds Length = 3300 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2260 atactgcaggagctgaggag 2279
>gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete sequence Length = 198652 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 ttgccctgttcctgtagagccttg 366 ||||||| |||||||||||||||| Sbjct: 169427 ttgccctattcctgtagagccttg 169450
>gb|AF100894.1|AF100894 Ehrlichia sp. 'CGE agent' ankyrin (ank) gene, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AF100893.1|AF100893 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AF100892.1|AF100892 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AF100891.1|AF100891 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AF100890.1|AF100890 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AF100885.1|AF100885 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2820 atactgcaggagctgaggag 2839
>gb|AF100884.1|AF100884 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2820 atactgcaggagctgaggag 2839
>gb|AF100883.1|AF100883 Ehrlichia sp. 'HGE agent' from USA ankyrin (ank) gene, complete cds Length = 3743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2820 atactgcaggagctgaggag 2839
>gb|AF100882.1|AF100882 Ehrlichia equi ankyrin (ank) gene, complete cds Length = 3662 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2817 atactgcaggagctgaggag 2836
>gb|AC128674.3| Homo sapiens BAC clone RP11-1390M18 from UL, complete sequence Length = 202721 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 82452 aggagctgaggaggatgaag 82433
>gb|AF047897.2|AF047897 Ehrlichia phagocytophila ankyrin protein-A (ank) gene, ankA allele, complete cds Length = 3733 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2826 atactgcaggagctgaggag 2845
>gb|AF153716.2|AF153716 Ehrlichia phagocytophila ankyrin protein-A (ank) gene, ankA allele, complete cds Length = 3703 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2874 atactgcaggagctgaggag 2893
>gb|AC127384.4| Homo sapiens BAC clone RP11-1390A11 from UL, complete sequence Length = 202837 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 161714 aggagctgaggaggatgaag 161733
>gb|AC007489.3|AC007489 Homo sapiens chromosome 16 clone RP11-122K22, complete sequence Length = 180401 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gagtgtctggaggaaacctc 25 |||||||||||||||||||| Sbjct: 131434 gagtgtctggaggaaacctc 131415
>gb|AY954810.1| Arabidopsis thaliana hypothetical protein (At2g32550) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aggagctgaggaggatgaag 151 |||||||||||||||||||| Sbjct: 102 aggagctgaggaggatgaag 83
>gb|AF020521.2| Ehrlichia sp. 'HGE agent' 160kDa protein (ank) gene, complete cds Length = 4691 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atactgcaggagctgaggag 144 |||||||||||||||||||| Sbjct: 2882 atactgcaggagctgaggag 2901
>gb|AC123705.12| Mus musculus chromosome 12, clone RP23-355K21, complete sequence Length = 217397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aaggcggcaggcaggtgaag 168 |||||||||||||||||||| Sbjct: 76478 aaggcggcaggcaggtgaag 76459
>emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chromosome X, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ctcatctgtttcaagttcat 320 |||||||||||||||||||| Sbjct: 124964 ctcatctgtttcaagttcat 124983
>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ttcatccacaaaaagggtta 429 |||||||||||||||||||| Sbjct: 2933 ttcatccacaaaaagggtta 2952 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,760,990 Number of Sequences: 3902068 Number of extensions: 4760990 Number of successful extensions: 102602 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102442 Number of HSP's gapped (non-prelim): 160 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
