ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14h15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds Length = 1403 Score = 1215 bits (613), Expect = 0.0 Identities = 629/633 (99%), Gaps = 1/633 (0%) Strand = Plus / Plus Query: 1 gactccgcggnatggatggaatgcgatcagagacatggttgtccgtggtgctcctgccat 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gactccgcgg-atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccat 251 Query: 61 agccatagcagcagcactatcattggctgtggaagttaatgatcacaatttcattggtac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 agccatagcagcagcactatcattggctgtggaagttaatgatcacaatttcattggtac 311 Query: 121 acctgcggaagcagcctcgttcgtttccaagaagttggaataccttgtatccagccggcc 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 acccgcggaagcagcctcgttcgtttccaagaagttggaataccttgtatccagccggcc 371 Query: 181 cacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagc 431 Query: 241 tgaaacagcaaaagatgccaaatctatctttcaggtcttcattgaagctgcagagactat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 tgaaacagcaaaagatgccaaatctatctttcaggtcttcattgaagctgcagagactat 491 Query: 301 gctagttgatgatgtggctgataataaggcaattggtttgcatggagctgaattccttca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gctagttgatgatgtggctgataataaggcaattggtttgcatggagctgaattccttca 551 Query: 361 acggcagcttggaagttcaaaaaacatttctgttctaacccattgtaatactggcagcct 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 acggcagcttggaagttcgaaaaacatttctgttctaacccattgtaatactggcagcct 611 Query: 421 tgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctggaggagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 tgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctggaggagt 671 Query: 481 tttggagaaggccttctgcactgaaactcgtccatttaaccagggttccaggcttacagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 tttggagaaggccttctgcactgaaactcgtccatttaaccagggttccaggcttacagc 731 Query: 541 ttttgagttagttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 ttttgagttagttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgc 791 Query: 601 actgatgaataatgggcaggttcaagctgtaat 633 ||||||||||||||| ||||||||||||||||| Sbjct: 792 actgatgaataatggacaggttcaagctgtaat 824
>gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase 2 mRNA, complete cds Length = 1382 Score = 545 bits (275), Expect = e-152 Identities = 533/619 (86%) Strand = Plus / Plus Query: 12 atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatagcag 71 |||| |||||||| || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 249 atggctggaatgcaataagagacatggttgtccgtggtgctccagcaatagccatagcag 308 Query: 72 cagcactatcattggctgtggaagttaatgatcacaatttcattggtacacctgcggaag 131 | |||||| |||| || || |||||| |||| |||| |||||||| |||| |||| Sbjct: 309 cggcactagcattagccgttgaagtttctgatttagattttattggtacgcctgaagaag 368 Query: 132 cagcctcgttcgtttccaagaagttggaataccttgtatccagccggcccacagcagtga 191 |||| || || ||||| ||||| ||||||||||||||||||||||| || || ||||||| Sbjct: 369 cagcttcttttgtttcaaagaaattggaataccttgtatccagccgaccaactgcagtga 428 Query: 192 acctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaa 251 |||| ||||||||||| |||||||| || | ||||| |||| |||||||||| |||| Sbjct: 429 acctatctgatgctgcaacaaagctccaaactttggtatcaaaggcagctgaaactgcaa 488 Query: 252 aagatgccaaatctatctttcaggtcttcattgaagctgcagagactatgctagttgatg 311 ||||| |||| |||||||||||||||| |||||| || |||||||| ||||| ||||||| Sbjct: 489 aagattccaagtctatctttcaggtctacattgaggccgcagagacgatgcttgttgatg 548 Query: 312 atgtggctgataataaggcaattggtttgcatggagctgaattccttcaacggcagcttg 371 ||||||| |||||||| || ||||| | |||||||||| ||| |||||| ||||||||| Sbjct: 549 atgtggcagataataaagctattggctcacatggagctgtatttcttcaaaggcagcttg 608 Query: 372 gaagttcaaaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctg 431 || ||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 609 caaattcaaaaaagatatctgttctaacccattgtaatactggcagtcttgcaactgctg 668 Query: 432 gttatggaactgcccttggggttattcgtgctcttcactctggaggagttttggagaagg 491 ||||||||||||||||||||||||| || |||||||| || || |||||||| ||||||| Sbjct: 669 gttatggaactgcccttggggttatacgcgctcttcattcggggggagttttagagaagg 728 Query: 492 ccttctgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgagttag 551 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| Sbjct: 729 ccttttgcaccgaaactcgtccatttaaccagggatccagacttacagctttcgagttag 788 Query: 552 ttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaata 611 ||||||| |||||||| || || |||||||||| |||||||| ||||| ||||||| Sbjct: 789 ttcatgaaaaaatacctgcaacactgatagcagattctgctgctgctgcgttgatgaaac 848 Query: 612 atgggcaggttcaagctgt 630 | ||||| ||||| ||||| Sbjct: 849 aagggcatgttcaggctgt 867
>gb|AY104678.1| Zea mays PCO081661 mRNA sequence Length = 1558 Score = 545 bits (275), Expect = e-152 Identities = 533/619 (86%) Strand = Plus / Plus Query: 12 atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatagcag 71 |||| |||||||| || |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 249 atggctggaatgcaataagagacatggttgtccgtggtgctccagcaatagccatagcag 308 Query: 72 cagcactatcattggctgtggaagttaatgatcacaatttcattggtacacctgcggaag 131 | |||||| |||| || || |||||| |||| |||| |||||||| |||| |||| Sbjct: 309 cggcactagcattagccgttgaagtttctgatttagattttattggtacgcctgaagaag 368 Query: 132 cagcctcgttcgtttccaagaagttggaataccttgtatccagccggcccacagcagtga 191 |||| || || ||||| ||||| ||||||||||||||||||||||| || || ||||||| Sbjct: 369 cagcttcttttgtttcaaagaaattggaataccttgtatccagccgaccaactgcagtga 428 Query: 192 acctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaa 251 |||| ||||||||||| |||||||| || | ||||| |||| |||||||||| |||| Sbjct: 429 acctatctgatgctgcaacaaagctccaaactttggtatcaaaggcagctgaaactgcaa 488 Query: 252 aagatgccaaatctatctttcaggtcttcattgaagctgcagagactatgctagttgatg 311 ||||| |||| |||||||||||||||| |||||| || |||||||| ||||| ||||||| Sbjct: 489 aagattccaagtctatctttcaggtctacattgaggccgcagagacgatgcttgttgatg 548 Query: 312 atgtggctgataataaggcaattggtttgcatggagctgaattccttcaacggcagcttg 371 ||||||| |||||||| || ||||| | |||||||||| ||| |||||| ||||||||| Sbjct: 549 atgtggcagataataaagctattggctcacatggagctgtatttcttcaaaggcagcttg 608 Query: 372 gaagttcaaaaaacatttctgttctaacccattgtaatactggcagccttgcaaccgctg 431 || ||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 609 caaattcaaaaaagatatctgttctaacccattgtaatactggcagtcttgcaactgctg 668 Query: 432 gttatggaactgcccttggggttattcgtgctcttcactctggaggagttttggagaagg 491 ||||||||||||||||||||||||| || |||||||| || || |||||||| ||||||| Sbjct: 669 gttatggaactgcccttggggttatacgcgctcttcattcggggggagttttagagaagg 728 Query: 492 ccttctgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgagttag 551 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| Sbjct: 729 ccttttgcaccgaaactcgtccatttaaccagggatccagacttacagctttcgagttag 788 Query: 552 ttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatgaata 611 ||||||| |||||||| || || |||||||||| |||||||| ||||| ||||||| Sbjct: 789 ttcatgaaaaaatacctgcaacactgatagcagattctgctgctgctgcgttgatgaaac 848 Query: 612 atgggcaggttcaagctgt 630 | ||||| ||||| ||||| Sbjct: 849 aagggcatgttcaggctgt 867
>dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124H10, full insert sequence Length = 1344 Score = 396 bits (200), Expect = e-107 Identities = 403/468 (86%), Gaps = 2/468 (0%) Strand = Plus / Plus Query: 143 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 202 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 287 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 346 Query: 203 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 262 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 347 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 406 Query: 263 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 322 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 407 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 466 Query: 323 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 381 || ||||||||||| | ||||||||||| || || ||| | | |||| | || || || Sbjct: 467 aacaaggcaattggctctcatggagctgagtttctcaaacagaaacttg-aggtctctaa 525 Query: 382 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 441 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 526 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 585 Query: 442 tgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcac 501 |||| | |||||||||||||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 586 tgccttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcac 645 Query: 502 tgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaa 561 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 646 tgaaactcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaa 705 Query: 562 aatacccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | ||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 706 agtacccgcaacgctgatagcagattctgctgcagctgcactgatgaa 753 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 12 atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatagcag 71 |||||||||| || ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 153 atggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatagcag 212 Query: 72 c 72 | Sbjct: 213 c 213
>dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H07, full insert sequence Length = 1391 Score = 396 bits (200), Expect = e-107 Identities = 403/468 (86%), Gaps = 2/468 (0%) Strand = Plus / Plus Query: 143 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 202 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 361 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 420 Query: 203 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 262 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 421 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 480 Query: 263 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 322 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 481 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 540 Query: 323 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 381 || ||||||||||| | ||||||||||| || || ||| | | |||| | || || || Sbjct: 541 aacaaggcaattggctctcatggagctgagtttctcaaacagaaacttg-aggtctctaa 599 Query: 382 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 441 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 600 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 659 Query: 442 tgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcac 501 |||| | |||||||||||||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 660 tgccttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcac 719 Query: 502 tgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaa 561 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 720 tgaaactcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaa 779 Query: 562 aatacccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | ||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 780 agtacccgcaacgctgatagcagattctgctgcagctgcactgatgaa 827 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 12 atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatagcag 71 |||||||||| || ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 227 atggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatagcag 286 Query: 72 c 72 | Sbjct: 287 c 287
>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full insert sequence Length = 1538 Score = 396 bits (200), Expect = e-107 Identities = 403/468 (86%), Gaps = 2/468 (0%) Strand = Plus / Plus Query: 143 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 202 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 349 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 408 Query: 203 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 262 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 409 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 468 Query: 263 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 322 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 469 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 528 Query: 323 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 381 || ||||||||||| | ||||||||||| || || ||| | | |||| | || || || Sbjct: 529 aacaaggcaattggctctcatggagctgagtttctcaaacagaaacttg-aggtctctaa 587 Query: 382 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 441 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 588 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 647 Query: 442 tgcccttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcac 501 |||| | |||||||||||||||||||||||||||||| || | ||||||||||| ||||| Sbjct: 648 tgccttgggggttattcgtgctcttcactctggaggaattctagagaaggccttttgcac 707 Query: 502 tgaaactcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaa 561 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 708 tgaaactcgtccatttaaccagggttccaggcttacagctttcgagttagttcacgacaa 767 Query: 562 aatacccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | ||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 768 agtacccgcaacgctgatagcagattctgctgcagctgcactgatgaa 815 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 12 atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatagcag 71 |||||||||| || ||||||||||||||||||||||| |||||||| || |||||||||| Sbjct: 215 atggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatagcag 274 Query: 72 c 72 | Sbjct: 275 c 275
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 414 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 473 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 82807 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 82866 Query: 474 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 524 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 82867 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 82917 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 520 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 579 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 83218 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 83277 Query: 580 agcagactctgctgcagctgcactgatgaa 609 |||||| ||||||||||||||||||||||| Sbjct: 83278 agcagattctgctgcagctgcactgatgaa 83307 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 26 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 72 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 81616 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 81662 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 280 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 339 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 82569 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 82628 Query: 340 gcatggagctga 351 ||||||||||| Sbjct: 82629 tcatggagctga 82640 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 172 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 231 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 81870 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 81929 Query: 232 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 276 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 81930 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 81974
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 414 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 473 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6026724 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6026783 Query: 474 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 524 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 6026784 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 6026834 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 520 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 579 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 6027135 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 6027194 Query: 580 agcagactctgctgcagctgcactgatgaa 609 |||||| ||||||||||||||||||||||| Sbjct: 6027195 agcagattctgctgcagctgcactgatgaa 6027224 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 26 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 72 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 6025533 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 6025579 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 280 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 339 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 6026486 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 6026545 Query: 340 gcatggagctga 351 ||||||||||| Sbjct: 6026546 tcatggagctga 6026557 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 172 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 231 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 6025787 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 6025846 Query: 232 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 276 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 6025847 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 6025891
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 414 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 473 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6093201 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6093260 Query: 474 gaggagttttggagaaggccttctgcactgaaactcgtccatttaaccagg 524 ||||| || | ||||||||||| |||||||||||||||||||||||||||| Sbjct: 6093261 gaggaattctagagaaggccttttgcactgaaactcgtccatttaaccagg 6093311 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 520 ccagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgat 579 |||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| |||| Sbjct: 6093612 ccagggttccaggcttacagctttcgagttagttcacgacaaagtacccgcaacgctgat 6093671 Query: 580 agcagactctgctgcagctgcactgatgaa 609 |||||| ||||||||||||||||||||||| Sbjct: 6093672 agcagattctgctgcagctgcactgatgaa 6093701 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 26 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 72 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 6092010 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 6092056 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 280 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 339 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 6092963 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 6093022 Query: 340 gcatggagctga 351 ||||||||||| Sbjct: 6093023 tcatggagctga 6093034 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 172 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 231 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 6092264 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 6092323 Query: 232 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 276 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 6092324 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 6092368
>ref|NM_001036262.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.3 mRNA, complete cds Length = 1395 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 503 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 562 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 563 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 622 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 623 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 682 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 683 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 725 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 148 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 207 Query: 95 gtt 97 ||| Sbjct: 208 gtt 210
>ref|NM_201699.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.2 mRNA, complete cds Length = 1530 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 698 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 757 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 758 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 817 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 818 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 860 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 283 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 342 Query: 95 gtt 97 ||| Sbjct: 343 gtt 345
>ref|NM_126596.2| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.1 mRNA, complete cds Length = 1510 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 677 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 678 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 737 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 738 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 797 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 798 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 840 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 263 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 322 Query: 95 gtt 97 ||| Sbjct: 323 gtt 325
>gb|AY128839.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1024 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 356 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 415 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 416 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 475 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 476 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 535 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 536 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 578 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 1 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 60 Query: 95 gtt 97 ||| Sbjct: 61 gtt 63
>gb|AY099595.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1202 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 433 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 492 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 493 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 552 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 553 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 612 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 613 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 655 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 78 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 137 Query: 95 gtt 97 ||| Sbjct: 138 gtt 140
>emb|BX821142.1|CNS0AA41 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZD03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 564 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 623 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 624 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 683 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 684 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 743 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 744 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 786 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 209 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 268 Query: 95 gtt 97 ||| Sbjct: 269 gtt 271
>emb|BX820919.1|CNS0A8MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1253 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 525 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 584 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 585 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 644 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 645 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 704 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 705 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 747 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 170 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 229 Query: 95 gtt 97 ||| Sbjct: 230 gtt 232
>emb|BX820068.1|CNS0A8IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 698 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 757 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 758 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 817 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 818 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 860 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 283 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 342 Query: 95 gtt 97 ||| Sbjct: 343 gtt 345
>emb|BX819922.1|CNS0A7WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 101 bits (51), Expect = 3e-18 Identities = 180/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 582 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 641 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 642 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 701 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 702 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 761 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 762 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 804 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 227 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 286 Query: 95 gtt 97 ||| Sbjct: 287 gtt 289
>gb|AY087601.1| Arabidopsis thaliana clone 36965 mRNA, complete sequence Length = 1386 Score = 97.6 bits (49), Expect = 4e-17 Identities = 179/223 (80%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| || | |||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacamtggcagccttgctaccgccggatatggtactgccc 677 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | |||||| |||| Sbjct: 678 tcggtgtcatccgtgcactccatactcaaggaatcttagaaagagcatactgcacagaaa 737 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagttagttcatgacaaaatac 566 ||||||||||||| || || || ||||||||||| |||||||| || ||||| ||||| | Sbjct: 738 ctcgtccatttaatcaaggatcgaggcttacagcgtttgagttggtgcatgagaaaatcc 797 Query: 567 ccgccacgttgatagcagactctgctgcagctgcactgatgaa 609 | || || | || |||||||| |||||||||||||||||||| Sbjct: 798 ctgcaactctcattgcagactcagctgcagctgcactgatgaa 840 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagc 63 |||||||| |||||||||||||| ||||| Sbjct: 263 atggttgtacgtggtgctcctgctatagc 291
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 521 cagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgata 580 ||||| || ||||||||||| |||||||| || ||||| ||||| || || || | || Sbjct: 15086 cagggatcgaggcttacagcgtttgagttggtgcatgagaaaatccctgcaactctcatt 15145 Query: 581 gcagactctgctgcagctgcactgatgaa 609 |||||||| |||||||||||||||||||| Sbjct: 15146 gcagactcagctgcagctgcactgatgaa 15174 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 13970 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 14029 Query: 95 gtt 97 ||| Sbjct: 14030 gtt 14032 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 ctgcactgaaactcgtccatttaa 519 |||||| ||||||||||||||||| Sbjct: 14792 ctgcacagaaactcgtccatttaa 14815
>dbj|AB031321.1| Nicotiana tabacum cig2 mRNA, complete cds Length = 1378 Score = 61.9 bits (31), Expect = 2e-06 Identities = 145/183 (79%) Strand = Plus / Plus Query: 428 gctggttatggaactgcccttggggttattcgtgctcttcactctggaggagttttggag 487 ||||| ||||||||||| ||||| ||||| || || ||| | ||| |||||| | || Sbjct: 575 gctggatatggaactgctcttggtgttatccgggcactttatactgatggagttctagaa 634 Query: 488 aaggccttctgcactgaaactcgtccatttaaccagggttccaggcttacagcttttgag 547 | ||| |||||||| ||||| ||||| || || ||||| ||||| | || || || ||| Sbjct: 635 agggcattctgcacagaaacccgtcccttcaatcagggatccagattgaccgcattcgag 694 Query: 548 ttagttcatgacaaaatacccgccacgttgatagcagactctgctgcagctgcactgatg 607 || |||||||| || ||||| ||||| | |||||||| || |||||||||||| ||||| Sbjct: 695 ttggttcatgagaacataccagccacccttatagcagattcagctgcagctgcattgatg 754 Query: 608 aat 610 ||| Sbjct: 755 aat 757
>emb|BX821946.1|CNS0A8CG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Plus Query: 387 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 446 |||||||| | |||||||| |||||||||| |||||| ||||| || ||||| ||||||| Sbjct: 531 tttctgttttgacccattgcaatactggcacccttgctaccgccggatatggtactgccc 590 Query: 447 ttggggttattcgtgctcttcactctggaggagttttggagaaggccttctgcactgaaa 506 | || || || ||||| || || || |||| | || || | || | ||| || |||| Sbjct: 591 tcggtgtaatccgtgcactccatactcaaggattcttagaaagagcatactgaacagaaa 650 Query: 507 ctcgtccatttaaccagggttccaggcttacagcttttgagt 548 ||||||||||||| || || || ||||| ||||| ||||||| Sbjct: 651 ctcgtccatttaatcaaggatcgaggctcacagcgtttgagt 692 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 177 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 236 Query: 95 gtt 97 ||| Sbjct: 237 gtt 239
>gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete sequence Length = 133901 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 521 cagggttccaggcttacagcttttgagttagttcatgacaaaatacccgccacgttgata 580 ||||| ||||| ||||| || | |||||| || |||||||||||||| || || | || Sbjct: 30601 cagggatccagacttactgcctatgagttggtacatgacaaaataccagcaactcttatt 30542 Query: 581 gcagactctgctgcagctgca 601 ||||| ||||||||||||||| Sbjct: 30541 gcagattctgctgcagctgca 30521
>emb|BX819929.1|CNS0A8I4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 581 gcagactctgctgcagctgcactgatgaa 609 |||||||| |||||||||||||||||||| Sbjct: 25 gcagactcagctgcagctgcactgatgaa 53
>ref|XM_679183.1| PREDICTED: Danio rerio similar to MGC81751 protein (LOC556393), mRNA Length = 1626 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 471 ctggaggagttttggagaaggcc 493 ||||||||||||||||||||||| Sbjct: 962 ctggaggagttttggagaaggcc 940
>ref|XM_392553.2| PREDICTED: Apis mellifera similar to CG11334-PB, isoform B (LOC409023), mRNA Length = 1586 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 396 taacccattgtaatactggcagccttgcaaccgctggttatgg 438 |||||||||| ||||| || ||||||||||| || |||||||| Sbjct: 668 taacccattgcaatacgggtagccttgcaacagcaggttatgg 710
>emb|BX820382.1|CNS0A8KT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1687 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 94 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 259 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 318 Query: 95 gtt 97 ||| Sbjct: 319 gtt 321
>emb|CR450793.12| Zebrafish DNA sequence from clone DKEY-48M5 in linkage group 10, complete sequence Length = 130542 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 79255 tcagaacttggtgtcaacaaca 79234
>emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in linkage group 14, complete sequence Length = 190712 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 115020 tcagaacttggtgtcaacaaca 115041
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 99930 tcagaacttggtgtcaacaaca 99909
>emb|CR925821.12| Zebrafish DNA sequence from clone DKEY-27D1 in linkage group 14, complete sequence Length = 184616 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 206 tcagaacttggtgtcaacaaca 185
>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5 Length = 297750 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 33 acatggttgtccgtggtgctcctgccatag 62 ||||||||||| | |||||||||||||||| Sbjct: 282587 acatggttgtcaggggtgctcctgccatag 282558
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 53313 tcagaacttggtgtcaacaaca 53334
>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE, complete sequence Length = 42001 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 tgaaacagcaaaagatgccaaa 262 |||||||||||||||||||||| Sbjct: 7872 tgaaacagcaaaagatgccaaa 7893
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 tatctttcaggtcttcattgaa 286 |||||||||||||||||||||| Sbjct: 5770666 tatctttcaggtcttcattgaa 5770645
>emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in linkage group 10, complete sequence Length = 166449 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 53405 tcagaacttggtgtcaacaaca 53384
>emb|BX088530.6| Zebrafish DNA sequence from clone DKEY-56F11 in linkage group 10, complete sequence Length = 165564 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 69045 tcagaacttggtgtcaacaaca 69066
>emb|BX842669.10| Zebrafish DNA sequence from clone DKEY-222O17 in linkage group 20, complete sequence Length = 48580 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 44815 tcagaacttggtgtcaacaaca 44836
>emb|BX640593.8| Zebrafish DNA sequence from clone DKEY-183C16 in linkage group 4, complete sequence Length = 218192 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 86283 tcagaacttggtgtcaacaaca 86304
>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22, complete sequence Length = 183551 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaaca 238 |||||||||||||||||||||| Sbjct: 47771 tcagaacttggtgtcaacaaca 47750
>ref|NM_001016877.2| Xenopus tropicalis hypothetical protein LOC549631 (LOC549631), mRNA Length = 1337 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 494 ttctgcactgaaactcgtccatttaaccagggttccaggcttacagctt 542 ||||||||||| || ||||| | |||||||| ||||||||||| |||| Sbjct: 642 ttctgcactgagacccgtccttacaaccagggctccaggcttacggctt 690
>ref|XM_380743.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00567.1) partial mRNA Length = 7884 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 gcccttggggttattcgtgct 463 ||||||||||||||||||||| Sbjct: 6955 gcccttggggttattcgtgct 6975
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 caaaaaacatttctgttctaaccca 402 ||||||||| ||||||||||||||| Sbjct: 26699 caaaaaacagttctgttctaaccca 26675
>emb|BX572075.8| Zebrafish DNA sequence from clone CH211-158N13 in linkage group 12, complete sequence Length = 163859 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 atagcagcagcactatcattg 85 ||||||||||||||||||||| Sbjct: 27394 atagcagcagcactatcattg 27374
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 gttaatgatcacaatttcatt 115 ||||||||||||||||||||| Sbjct: 172227 gttaatgatcacaatttcatt 172247
>gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete sequence Length = 109299 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 ttggaagttcaaaaaacattt 389 ||||||||||||||||||||| Sbjct: 13744 ttggaagttcaaaaaacattt 13724
>ref|XM_627112.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2080), partial mRNA Length = 1827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 agttgatgatgtggctgataa 324 ||||||||||||||||||||| Sbjct: 812 agttgatgatgtggctgataa 792
>emb|BX820889.1|CNS0AA7P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1410 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 atggttgtccgtggtgctcctgccatagc 63 |||||||| |||||||||||||| ||||| Sbjct: 269 atggttgtacgtggtgctcctgctatagc 297
>gb|AF287134.1| Ochromonas danica mitochondrial DNA, complete genome Length = 41035 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 atagcagactctgctgcagct 598 ||||||||||||||||||||| Sbjct: 34496 atagcagactctgctgcagct 34476
>emb|AL954138.8| Zebrafish DNA sequence from clone CH211-108D22, complete sequence Length = 183082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcttcattgaagctgcagaga 296 ||||||||||||||||||||| Sbjct: 118011 tcttcattgaagctgcagaga 117991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcttcattgaagctgcagaga 296 ||||||||||||||||||||| Sbjct: 115402 tcttcattgaagctgcagaga 115382 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tcttcattgaagctgcagaga 296 ||||||||||||||||||||| Sbjct: 112789 tcttcattgaagctgcagaga 112769
>emb|CR848601.2| Xenopus tropicalis finished cDNA, clone TGas129a07 Length = 1337 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 494 ttctgcactgaaactcgtccatttaaccagggttccaggcttacagctt 542 ||||||||||| || ||||| | |||||||| ||||||||||| |||| Sbjct: 642 ttctgcactgagacccgtccttacaaccagggctccaggcttacggctt 690
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5, complete sequence Length = 143013 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcagaacttggtgtcaacaac 237 ||||||||||||||||||||| Sbjct: 21274 tcagaacttggtgtcaacaac 21254
>gb|U54635.1|ODU54635 Ochromonas danica NADH dehydrogenase (nad4L) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 332 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 578 atagcagactctgctgcagct 598 ||||||||||||||||||||| Sbjct: 239 atagcagactctgctgcagct 219
>ref|XM_634988.1| Dictyostelium discoideum putative alpha kinase (DDB0220109), partial mRNA Length = 2826 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tagttgatgatgtggctgat 322 |||||||||||||||||||| Sbjct: 304 tagttgatgatgtggctgat 285
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 gtgctcctgccatagccata 67 |||||||||||||||||||| Sbjct: 58523 gtgctcctgccatagccata 58542
>ref|XM_424985.1| PREDICTED: Gallus gallus similar to stomatin (EPB72)-like 2; stomatin-like protein 2; stomatin-like 2 (LOC427411), mRNA Length = 962 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gccacgttgatagcagactc 588 |||||||||||||||||||| Sbjct: 365 gccacgttgatagcagactc 346
>gb|AC132323.3| Mus musculus BAC clone RP24-268M17 from chromosome 9, complete sequence Length = 182469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 ctttcaggtcttcattgaag 287 |||||||||||||||||||| Sbjct: 81673 ctttcaggtcttcattgaag 81692
>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence Length = 204286 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 ttaatgatcacaatttcattggta 119 ||||||||| |||||||||||||| Sbjct: 16779 ttaatgatctcaatttcattggta 16802
>gb|AY600302.1| Homo sapiens origin recognition complex, subunit 4-like (yeast) (ORC4L) gene, complete cds Length = 90562 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tgaaacagcaaaagatgccaaatc 264 ||||||| |||||||||||||||| Sbjct: 54914 tgaaacaacaaaagatgccaaatc 54891
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence Length = 200841 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gtgctcctgccatagccata 67 |||||||||||||||||||| Sbjct: 5895 gtgctcctgccatagccata 5876
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1 Contains a novel gene, complete sequence Length = 186246 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tgataataaggcaattggtt 338 |||||||||||||||||||| Sbjct: 101661 tgataataaggcaattggtt 101642
>emb|Z75271.1|SCYOR363C S.cerevisiae chromosome XV reading frame ORF YOR363c Length = 4624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cagcttggaagttcaaaaaa 384 |||||||||||||||||||| Sbjct: 871 cagcttggaagttcaaaaaa 852
>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tctgatgctgctacaaagcttcagaact 224 |||||||| ||||| ||||||||||||| Sbjct: 140742 tctgatgcagctactaagcttcagaact 140715
>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence Length = 182241 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tagcagcagcactatcattg 85 |||||||||||||||||||| Sbjct: 73012 tagcagcagcactatcattg 73031
>gb|AE005932.1| Caulobacter crescentus CB15 section 258 of 359 of the complete genome Length = 13291 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gatcagagacatggttgtcc 44 |||||||||||||||||||| Sbjct: 9464 gatcagagacatggttgtcc 9445
>gb|AC023494.31| Homo sapiens 3 BAC RP11-59M4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57963 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gttgatgatgtggctgataa 324 |||||||||||||||||||| Sbjct: 9320 gttgatgatgtggctgataa 9339
>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21, complete sequence Length = 185548 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tctgatgctgctacaaagcttcagaact 224 |||||||| ||||| ||||||||||||| Sbjct: 69020 tctgatgcagctactaagcttcagaact 68993
>emb|CR386500.1| Gallus gallus finished cDNA, clone ChEST333h21 Length = 1243 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gccacgttgatagcagactc 588 |||||||||||||||||||| Sbjct: 649 gccacgttgatagcagactc 630
>emb|CR385785.1| Gallus gallus finished cDNA, clone ChEST68h19 Length = 986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gccacgttgatagcagactc 588 |||||||||||||||||||| Sbjct: 392 gccacgttgatagcagactc 373
>gb|AC090842.3| Homo sapiens chromosome 3 clone RP11-155E14 map 3p, complete sequence Length = 154922 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aagctgcagagactatgcta 304 |||||||||||||||||||| Sbjct: 108773 aagctgcagagactatgcta 108792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccatagccatagcagcagc 75 |||||||||||||||||||| Sbjct: 6235936 gccatagccatagcagcagc 6235955
>gb|AC019226.5| Homo sapiens BAC clone RP11-567F11 from 2, complete sequence Length = 132444 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tgaaacagcaaaagatgccaaatc 264 ||||||| |||||||||||||||| Sbjct: 119526 tgaaacaacaaaagatgccaaatc 119503
>emb|BX932823.1| Gallus gallus finished cDNA, clone ChEST268c7 Length = 1288 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gccacgttgatagcagactc 588 |||||||||||||||||||| Sbjct: 693 gccacgttgatagcagactc 674
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 ttgatgatgtggctgataataagg 329 ||||| |||||||||||||||||| Sbjct: 2547023 ttgatcatgtggctgataataagg 2547046
>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0009H03 Length = 151685 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccatagccatagcagcagc 75 |||||||||||||||||||| Sbjct: 123836 gccatagccatagcagcagc 123855
>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1190_B07 Length = 140200 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccatagccatagcagcagc 75 |||||||||||||||||||| Sbjct: 81219 gccatagccatagcagcagc 81238
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcagaacttggtgtcaacaacagc 240 |||||| ||||||||||||||||| Sbjct: 56688 tcagaatttggtgtcaacaacagc 56711
>gb|AC157097.5| Mus musculus 6 BAC RP24-369M3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206335 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tgtggaagttaatgatcaca 107 |||||||||||||||||||| Sbjct: 78472 tgtggaagttaatgatcaca 78491
>emb|BX120016.12| Zebrafish DNA sequence from clone CH211-232H16 in linkage group 2, complete sequence Length = 158139 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 agaacttggtgtcaacaaca 238 |||||||||||||||||||| Sbjct: 97914 agaacttggtgtcaacaaca 97895
>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ggagttttggagaaggcctt 495 |||||||||||||||||||| Sbjct: 171021 ggagttttggagaaggcctt 171040
>emb|Z75270.1|SCYOR362C S.cerevisiae chromosome XV reading frame ORF YOR362c Length = 2569 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cagcttggaagttcaaaaaa 384 |||||||||||||||||||| Sbjct: 1965 cagcttggaagttcaaaaaa 1946
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 ggagttttggagaaggcctt 495 |||||||||||||||||||| Sbjct: 162803 ggagttttggagaaggcctt 162822
>emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4, exons 6-11 Length = 24413 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 caaaaaacatttctgttctaaccc 401 ||||||||| |||||||||||||| Sbjct: 20652 caaaaaacagttctgttctaaccc 20629
>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete sequence Length = 147788 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tagcagcagcactatcattg 85 |||||||||||||||||||| Sbjct: 7051 tagcagcagcactatcattg 7032 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,182,523 Number of Sequences: 3902068 Number of extensions: 6182523 Number of successful extensions: 119079 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118763 Number of HSP's gapped (non-prelim): 294 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
