ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal9l02 |
|---|---|
| Clone Library Name | barley_pub |
>DHGY_CUCSA (P13443) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent| hydroxypyruvate reductase) (HPR) (GDH) Length = 382 Score = 171 bits (433), Expect(3) = 4e-46 Identities = 80/92 (86%), Positives = 85/92 (92%) Frame = -3 Query: 472 NPMFRVGLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYP 293 NPMFRVGLDVFEDEPYMKPGLA+MKNA++VPHIASASKWTREGMATLAALNVLGKIKGYP Sbjct: 289 NPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNVLGKIKGYP 348 Query: 292 VWGNPNAVEPFLDEEATPPPACPSIVNAKQLG 197 VW +PN VEPFLDE +PP A PSIVNAK LG Sbjct: 349 VWSDPNRVEPFLDENVSPPAASPSIVNAKALG 380 Score = 28.5 bits (62), Expect(3) = 4e-46 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 518 GPVIDEVALVEHLKG*P 468 GPVIDE ALV+HL+ P Sbjct: 274 GPVIDEAALVDHLRDNP 290 Score = 25.4 bits (54), Expect(3) = 4e-46 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 579 INPERLAMMKKEAVLVNAKPWP 514 +N E L MKK+A+L+N P Sbjct: 254 VNKESLKAMKKDAILINCSRGP 275
>GYAR_PYRHO (O58320) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 334 Score = 54.7 bits (130), Expect(2) = 1e-09 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDVFE+EPY L ++ N V+ PHI SAS REGMA L A N++ +G Sbjct: 263 GLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRG 314 Score = 26.9 bits (58), Expect(2) = 1e-09 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 IN ERL +MKK A+L+N Sbjct: 222 INEERLKLMKKTAILIN 238
>GYAR_PYRKO (Q5JEZ2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 333 Score = 53.9 bits (128), Expect(2) = 2e-09 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVL 314 GLDV+E+EPY L +KN V+ PHI SA+ REGMA L A N++ Sbjct: 263 GLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLI 309 Score = 27.3 bits (59), Expect(2) = 2e-09 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 IN ERL +MKK A+LVN Sbjct: 222 INEERLRLMKKTAILVN 238
>GYAR_PYRAB (Q9UYR1) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 335 Score = 51.6 bits (122), Expect(2) = 1e-08 Identities = 25/52 (48%), Positives = 33/52 (63%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDV+E+EPY L + N V+ PHI SA+ REGMA L A N++ +G Sbjct: 264 GLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315 Score = 26.9 bits (58), Expect(2) = 1e-08 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 IN ERL MMK+ A+L+N Sbjct: 223 INEERLKMMKRTAILIN 239
>GYAR_THELI (Q9C4M5) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 331 Score = 58.2 bits (139), Expect = 2e-08 Identities = 28/52 (53%), Positives = 35/52 (67%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDVFE+EPY L ++KN V+ PHI SA+ REGMA L A N++ KG Sbjct: 263 GLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAFAKG 314
>GYAR_PYRFU (Q8U3Y2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 336 Score = 50.4 bits (119), Expect(2) = 9e-08 Identities = 25/52 (48%), Positives = 32/52 (61%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDVFE+EPY L + N V+ PHI SA+ RE MA L A N++ +G Sbjct: 263 GLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIAFKRG 314 Score = 25.0 bits (53), Expect(2) = 9e-08 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 IN ERL +MK A+LVN Sbjct: 222 INEERLKLMKPTAILVN 238
>TKRA_ECOLI (P37666) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 47.0 bits (110), Expect = 4e-05 Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 454 GLDVFEDEPY-MKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDVFE EP + L M N V VPHI SA+ TR GMA A N++ ++G Sbjct: 259 GLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQG 311
>TKRA_ECO57 (P58220) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 324 Score = 47.0 bits (110), Expect = 4e-05 Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = -3 Query: 454 GLDVFEDEPY-MKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDVFE EP + L M N V VPHI SA+ TR GMA A N++ ++G Sbjct: 259 GLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQG 311
>TKRA_ENTAG (P58000) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 323 Score = 42.7 bits (99), Expect(2) = 9e-05 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -3 Query: 478 KANPMFRVGLDVFEDEPY-MKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIK 302 K + GLDVFE EP + L + N V +PHI SA+ TR GMA A N++ + Sbjct: 250 KDKTIHAAGLDVFEQEPLPVDSELLTLPNVVALPHIGSATHETRYGMARDAVDNLIAALA 309 Query: 301 G 299 G Sbjct: 310 G 310 Score = 22.3 bits (46), Expect(2) = 9e-05 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = -2 Query: 518 GPVIDEVALVEHLK 477 GPV+DE AL+ LK Sbjct: 237 GPVVDEQALIAALK 250
>GRHPR_HUMAN (Q9UBQ7) Glyoxylate reductase/hydroxypyruvate reductase (EC| 1.1.1.79) Length = 328 Score = 45.1 bits (105), Expect = 1e-04 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = -3 Query: 454 GLDVFEDEPY-MKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPV 290 GLDV EP L +KN V++PHI SA+ TR M+ LAA N+L ++G P+ Sbjct: 267 GLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 322
>GYAR_AERPE (Q9YAW4) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase)| Length = 335 Score = 42.7 bits (99), Expect(2) = 2e-04 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%) Frame = -3 Query: 451 LDVFEDEPYMKPG--LAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 LDVFE+EP + P L KN V+ PH ASA++ TR MA +AA N++ +G Sbjct: 265 LDVFEEEP-LNPNHPLTAFKNVVLAPHAASATRETRLRMAMMAAENLVAFAQG 316 Score = 21.2 bits (43), Expect(2) = 2e-04 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 I L +MKK A+LVN Sbjct: 223 IGESELKLMKKTAILVN 239
>YEAA_SCHPO (O14075) Putative 2-hydroxyacid dehydrogenase UNK4.10 (EC 1.-.-.-)| Length = 334 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = -3 Query: 466 MFRVGLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNV 317 ++ GLDVFE+EP + PGL E + +++PH+ + S T+ M +NV Sbjct: 264 VYSAGLDVFEEEPKIHPGLLENEKVILLPHLGTNSLETQYKMECAVLMNV 313
>GRHPR_MOUSE (Q91Z53) Glyoxylate reductase/hydroxypyruvate reductase (EC| 1.1.1.79) Length = 328 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = -3 Query: 454 GLDVFEDEPYMKPG--LAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 GLDV EP + P L +KN V++PHI SA+ TR M+ LAA N+L ++G Sbjct: 267 GLDVTTPEP-LPPSHPLLTLKNCVILPHIGSATYKTRNTMSLLAANNLLAGLRG 319
>SERA_ARATH (O04130) D-3-phosphoglycerate dehydrogenase, chloroplast precursor| (EC 1.1.1.95) (3-PGDH) Length = 624 Score = 39.7 bits (91), Expect = 0.006 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = -3 Query: 460 RVGLDVFEDEPYMKPG-LAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWG 284 + LDVF +EP K L + +N V PH+ +++K +EG+A A V G +KG Sbjct: 332 QAALDVFCEEPPSKDSRLIQHENVTVTPHLGASTKEAQEGVAIEIAEAVAGALKGELSAT 391 Query: 283 NPNA--VEPFLDEEATPPPACPSIVNAKQLG 197 NA V P + E T P IV A++LG Sbjct: 392 AVNAPMVAPEVLSELT-----PYIVLAEKLG 417
>SERA_ARCFU (O29445) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 527 Score = 38.1 bits (87), Expect = 0.018 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Frame = -3 Query: 478 KANPMFRVGLDVFEDEPYMKPG-LAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIK 302 KA + LDV+E EP L ++ N V PHIA++++ + + + A +++ K Sbjct: 244 KAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAASTREAQLNVGMIIAEDIVNMAK 303 Query: 301 GYPVWGNPN--AVEP 263 G PV N ++EP Sbjct: 304 GLPVRNAVNLPSIEP 318
>SERA_METTH (O27051) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 37.7 bits (86), Expect = 0.024 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHI-ASASKWTREGMATLAALNVLGKIKGYPVWGNPN 275 LDVFE+EP L E++N V+ PHI AS S+ R+ AA+ V +IK G P Sbjct: 255 LDVFEEEPPEGSPLLELENVVLTPHIGASTSEAQRD-----AAIIVANEIKTVFQGGAPR 309 Query: 274 AV--EPFLDEEATPPPACPSIVNAKQLG 197 V P +D E T P I A+++G Sbjct: 310 NVLNMPVMDSE-TYKSLKPYIELAEKMG 336
>DHGY_HYPME (P36234) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent| hydroxypyruvate reductase) (HPR) (GDH) (Hydroxypyruvate dehydrogenase) (Glyoxylate reductase) Length = 321 Score = 37.4 bits (85), Expect = 0.031 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = -3 Query: 478 KANPMFRVGLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMA 338 +A + G DVF EP + G ++ N + PHI SA+ RE MA Sbjct: 254 EAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMA 300
>YN14_YEAST (P53839) Putative 2-hydroxyacid dehydrogenase YNL274C (EC 1.-.-.-)| Length = 350 Score = 36.2 bits (82), Expect = 0.070 Identities = 25/79 (31%), Positives = 35/79 (44%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPN 275 GLDVFE EP + L M + +PH+ + S TR+ M L N K + G Sbjct: 276 GLDVFEYEPKISKELLSMSQVLGLPHMGTHSVETRKKMEELVVENA----KNVILTGKVL 331 Query: 274 AVEPFLDEEATPPPACPSI 218 + P L E P + P + Sbjct: 332 TIVPELQNEDWPNESKPLV 350
>SERA_METJA (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 524 Score = 30.8 bits (68), Expect(2) = 0.090 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKG 299 LDVFE+EP L + N + PH ++++ ++ T+ A + ++G Sbjct: 254 LDVFEEEPPKDNPLLTLDNVIGTPHQGASTEEAQKAAGTIVAEQIKKVLRG 304 Score = 23.9 bits (50), Expect(2) = 0.090 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 I E++A+MKK A++VN Sbjct: 212 IGREQIALMKKNAIIVN 228
>SERA_BACSU (P35136) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 34.7 bits (78), Expect = 0.20 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVFE EP + L + + PH+ +++K + +A + VL KG PV N Sbjct: 252 LDVFEVEPPVDNKLVDHPLVIATPHLGASTKEAQLNVAAQVSEEVLQFAKGLPVMSAINL 311 Query: 271 VEPFLDEEATPPP 233 DE A P Sbjct: 312 PAMTKDEFAKIKP 324
>SERA_RAT (O08651) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L + +N + PH+ +++K + A+ + +KG + G NA Sbjct: 258 LDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNA 317
>SERA_MOUSE (Q61753) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| (A10) Length = 532 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L + +N + PH+ +++K + A+ + +KG + G NA Sbjct: 258 LDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNA 317
>SERA_HUMAN (O43175) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L + +N + PH+ +++K + A+ + +KG + G NA Sbjct: 258 LDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNA 317
>SERA_BOVIN (Q5EAD2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 33.9 bits (76), Expect = 0.35 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L +N + PH+ +++K + AL + +KG + G NA Sbjct: 258 LDVFTEEPPRDRALVNHENVISCPHLGASTKEAQSRCGEEIALQFVDMVKGKALAGVVNA 317
>SERA_PONPY (Q5R7M2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L + +N + PH+ +++K + A+ + +KG + G NA Sbjct: 258 LDVFTEEPPRGRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTGVVNA 317
>SERA_MACFA (Q60HD7) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 33.5 bits (75), Expect = 0.45 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPNA 272 LDVF +EP L + +N + PH+ +++K + A+ + +KG + G NA Sbjct: 258 LDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLAGVVNA 317
>SERA_MYCLE (O33116) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 33.5 bits (75), Expect = 0.45 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPN 275 GLDVF EP L E+ VV PH+ +++ ++ T A +V + G V N Sbjct: 254 GLDVFATEPCTDSPLFELSQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 313 Query: 274 AVEPFLDEEATP 239 ++EE P Sbjct: 314 VDGGVVNEEVAP 325
>SERA_MYCTU (P0A544) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 33.1 bits (74), Expect = 0.59 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPN 275 GLDVF EP L E+ VV PH+ +++ ++ T A +V + G V N Sbjct: 254 GLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 313 Query: 274 AVEPFLDEEATP 239 ++EE P Sbjct: 314 VGGGVVNEEVAP 325
>SERA_MYCBO (P0A545) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 33.1 bits (74), Expect = 0.59 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = -3 Query: 454 GLDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWGNPN 275 GLDVF EP L E+ VV PH+ +++ ++ T A +V + G V N Sbjct: 254 GLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 313 Query: 274 AVEPFLDEEATP 239 ++EE P Sbjct: 314 VGGGVVNEEVAP 325
>DHGY_METEX (Q59516) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent| hydroxypyruvate reductase) (HPR) (GDH) (Hydroxypyruvate dehydrogenase) (Glyoxylate reductase) (HPR-A) Length = 313 Score = 30.4 bits (67), Expect(2) = 0.71 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = -3 Query: 454 GLDVFEDEPYMKPGL---AEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYP 293 G DV EP + A++ N +V PH+A ASK + +A NV + G P Sbjct: 251 GFDVVAQEPPKDGNILCDADLPNLIVTPHVAWASKEAMQILADQLVDNVEAFVAGKP 307 Score = 21.2 bits (43), Expect(2) = 0.71 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -1 Query: 579 INPERLAMMKKEAVLVN 529 I E+L MK+ A+L+N Sbjct: 210 IGAEQLKKMKRSAILIN 226
>SERA_SYNY3 (P73821) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 554 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = -3 Query: 451 LDVFEDEPYMKPGLAEMKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYP 293 LDVF EP + L E N ++ PH+ ++++ + +A A + + G P Sbjct: 281 LDVFAQEPLGESRLREFSNVILTPHLGASTEEAQVNVAVDVAEQIRDVLLGLP 333
>NIP7_YEAST (Q08962) 60S ribosome subunit biogenesis protein NIP7| Length = 181 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = -3 Query: 427 YMKPGLAEMKNAVVVPHIASAS----KWTREGMATL--AALNVLGKIKGYPVWGNPNAVE 266 Y+ +A++ +V P++ S K+T+ G L +L VL K Y +W PN Sbjct: 46 YVPDHVAKLATSVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEM 105 Query: 265 PFL 257 PFL Sbjct: 106 PFL 108
>KCY_PYRFU (Q8U2L4) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 192 Score = 29.3 bits (64), Expect = 8.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 204 CLALTMLGQAGGGVASSSRKGSTAFGFPHTGYPLI 308 CL +T+ G AG G + RK + +GF H LI Sbjct: 5 CLVITVSGLAGSGTTTLCRKLAEHYGFKHVYAGLI 39
>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 588 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 469 PMFRVGLDVFEDEPYMKPG 413 P+ V LD FED+P+ KPG Sbjct: 136 PLLEVDLDSFEDKPWRKPG 154
>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 581 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 469 PMFRVGLDVFEDEPYMKPG 413 P+ V LD FED+P+ KPG Sbjct: 150 PLLEVDLDSFEDKPWRKPG 168
>M4K1_MOUSE (P70218) Mitogen-activated protein kinase kinase kinase kinase 1| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 1) (MEK kinase kinase 1) (MEKKK 1) (Hematopoietic progenitor kinase) (HPK) Length = 827 Score = 29.3 bits (64), Expect = 8.5 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 325 LNVLGKIKGYPVWGNPNAVEPFLDEEATPPPACP----SIVNAKQLGLPSS 185 L++L K+K P G P +E DEE PPPA P S A LG+P + Sbjct: 285 LDLLDKMKN-PGKGLPVDIE---DEEPEPPPAIPRRIRSTYRASSLGIPDA 331
>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 536 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 469 PMFRVGLDVFEDEPYMKPG 413 P+ V LD FED+P+ KPG Sbjct: 150 PLLEVDLDSFEDKPWRKPG 168
>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| (Factor interacting with PAP) (hFip1) (Rearranged in hypereosinophilia) Length = 594 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 469 PMFRVGLDVFEDEPYMKPG 413 P+ V LD FED+P+ KPG Sbjct: 151 PLLEVDLDSFEDKPWRKPG 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,395,195 Number of Sequences: 219361 Number of extensions: 1573855 Number of successful extensions: 4663 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4660 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
