ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA 317 2e-83
2dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 1e-78
4emb|AJ234416.1|HVU234416 Hordeum vulgare partial mRNA; clone cMW... 194 2e-46
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
6dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
7dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
8emb|AJ234417.1|HVU234417 Hordeum vulgare partial mRNA; clone cMW... 131 3e-27
9gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent h... 117 4e-23
10dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvat... 115 2e-22
11gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent h... 111 3e-21
12emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydr... 107 4e-20
13dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyr... 88 4e-14
14dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyr... 88 4e-14
15dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate redu... 86 1e-13
16ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, actin... 78 4e-11
17gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate red... 78 4e-11
18gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate red... 78 4e-11
19gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (H... 78 4e-11
20gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (H... 78 4e-11
21emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
22ref|XM_366568.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 2.0
23gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 42 2.0
24emb|X58542.1|CSHPRAG C.sativus hpr-A gene for NADH-dependent hyd... 42 2.0
25ref|XM_483673.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
26ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative... 40 7.9
27ref|XM_463512.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
28ref|NM_190740.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
29gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 40 7.9
30ref|XM_385185.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 7.9
31emb|CR653454.2|CNS0F36C Tetraodon nigroviridis full-length cDNA 40 7.9
32gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 ma... 40 7.9
33gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.9
34gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 7.9
35emb|BX088577.3| Mouse DNA sequence from clone RP23-58H16 on chro... 40 7.9
36gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 40 7.9
37gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.9
38gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G... 40 7.9
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
43dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
44dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
45dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
46dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.9
47gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A... 40 7.9
48emb|AL805898.11| Mouse DNA sequence from clone RP23-432F24 on ch... 40 7.9
49dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
50dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
51dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
52dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
53ref|NM_208920.1| Eremothecium gossypii ACR165Wp (ACR165W), mRNA 40 7.9
54gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 40 7.9
55gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
56gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
57dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9

>ref|XM_463779.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1663

 Score =  317 bits (160), Expect = 2e-83
 Identities = 342/400 (85%), Gaps = 2/400 (0%)
 Strand = Plus / Minus

                                                                        
Query: 180  agcttggaggatggcaggccgagttgcttggcgttaacgatgcttgggcaggcaggaggc 239
            ||||| || ||||||||||||||||| ||||| ||||| ||||| ||||| ||||  |||
Sbjct: 1306 agctttgacgatggcaggccgagttgtttggcattaacaatgctggggcaagcagctggc 1247

                                                                        
Query: 240  ggcgtcgcttcctcatcgaggaagggctccaccgcgttcgggttcccccacaccgggtac 299
            ||||| || ||||| | ||| || ||||||||    |||||||||||||| ||||| || 
Sbjct: 1246 ggcgttgcatcctccttgagaaatggctccactagattcgggttcccccaaaccggataa 1187

                                                                        
Query: 300  cccttgatcttaccaagcacgttcagagcagcgagtgttgccatcccttcacgcgtccac 359
            ||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct: 1186 cccttgatcttgccaagaacgtttagagcagcaagtgttgccattccttcgcgcgtccac 1127

                                                                        
Query: 360  ttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctggc 419
            ||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || |||
Sbjct: 1126 ttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccgggc 1067

                                                                        
Query: 420  ttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagccttt 479
            ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| ||
Sbjct: 1066 ttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-tt 1008

                                                                        
Query: 480  gaggtgctccaccagtgcaacctcgtcgatcaccgggccacggcttcgcgttcaccagca 539
            |||||||||||||||||| ||||| || |||||||| || || ||| || ||||| || |
Sbjct: 1007 gaggtgctccaccagtgctacctcatcaatcaccggtcctcgactt-gcattcacaagaa 949

                                                    
Query: 540  ctgcctccttcttcatcatcgccagccgctctgggtttat 579
            | || ||||||||||| || |||||||  || ||||||||
Sbjct: 948  ccgcttccttcttcatgatggccagcctttccgggtttat 909



to top

>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full
            insert sequence
          Length = 1662

 Score =  317 bits (160), Expect = 2e-83
 Identities = 342/400 (85%), Gaps = 2/400 (0%)
 Strand = Plus / Minus

                                                                        
Query: 180  agcttggaggatggcaggccgagttgcttggcgttaacgatgcttgggcaggcaggaggc 239
            ||||| || ||||||||||||||||| ||||| ||||| ||||| ||||| ||||  |||
Sbjct: 1307 agctttgacgatggcaggccgagttgtttggcattaacaatgctggggcaagcagctggc 1248

                                                                        
Query: 240  ggcgtcgcttcctcatcgaggaagggctccaccgcgttcgggttcccccacaccgggtac 299
            ||||| || ||||| | ||| || ||||||||    |||||||||||||| ||||| || 
Sbjct: 1247 ggcgttgcatcctccttgagaaatggctccactagattcgggttcccccaaaccggataa 1188

                                                                        
Query: 300  cccttgatcttaccaagcacgttcagagcagcgagtgttgccatcccttcacgcgtccac 359
            ||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct: 1187 cccttgatcttgccaagaacgtttagagcagcaagtgttgccattccttcgcgcgtccac 1128

                                                                        
Query: 360  ttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctggc 419
            ||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || |||
Sbjct: 1127 ttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccgggc 1068

                                                                        
Query: 420  ttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagccttt 479
            ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| ||
Sbjct: 1067 ttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-tt 1009

                                                                        
Query: 480  gaggtgctccaccagtgcaacctcgtcgatcaccgggccacggcttcgcgttcaccagca 539
            |||||||||||||||||| ||||| || |||||||| || || ||| || ||||| || |
Sbjct: 1008 gaggtgctccaccagtgctacctcatcaatcaccggtcctcgactt-gcattcacaagaa 950

                                                    
Query: 540  ctgcctccttcttcatcatcgccagccgctctgggtttat 579
            | || ||||||||||| || |||||||  || ||||||||
Sbjct: 949  ccgcttccttcttcatgatggccagcctttccgggtttat 910



to top

>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full
            insert sequence
          Length = 2837

 Score =  301 bits (152), Expect = 1e-78
 Identities = 340/400 (85%), Gaps = 2/400 (0%)
 Strand = Plus / Minus

                                                                        
Query: 180  agcttggaggatggcaggccgagttgcttggcgttaacgatgcttgggcaggcaggaggc 239
            ||||| || ||||||||||||||||| ||||| ||||| |||||  |||| ||||  |||
Sbjct: 1234 agctttgacgatggcaggccgagttgtttggcattaacaatgctgtggcaagcagctggc 1175

                                                                        
Query: 240  ggcgtcgcttcctcatcgaggaagggctccaccgcgttcgggttcccccacaccgggtac 299
            ||||| || ||||| | ||| || ||||||||    |||||||||||||| ||||| || 
Sbjct: 1174 ggcgttgcatcctccttgagaaatggctccactagattcgggttcccccaaaccggataa 1115

                                                                        
Query: 300  cccttgatcttaccaagcacgttcagagcagcgagtgttgccatcccttcacgcgtccac 359
            ||||||||||| ||||| ||||| |||||| | ||||||||||| ||||| |||||||||
Sbjct: 1114 cccttgatcttgccaagaacgtttagagcaacaagtgttgccattccttcgcgcgtccac 1055

                                                                        
Query: 360  ttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctggc 419
            ||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || |||
Sbjct: 1054 ttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccgggc 995

                                                                        
Query: 420  ttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagccttt 479
            ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| ||
Sbjct: 994  ttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-tt 936

                                                                        
Query: 480  gaggtgctccaccagtgcaacctcgtcgatcaccgggccacggcttcgcgttcaccagca 539
            |||||||||||||||||| ||||| || |||||||| || || ||| || ||||| || |
Sbjct: 935  gaggtgctccaccagtgctacctcatcaatcaccggtcctcgactt-gcattcacaagaa 877

                                                    
Query: 540  ctgcctccttcttcatcatcgccagccgctctgggtttat 579
            | || ||||||||||| || |||||||  || ||||||||
Sbjct: 876  ccgcttccttcttcatgatggccagcctttccgggtttat 837



to top

>emb|AJ234416.1|HVU234416 Hordeum vulgare partial mRNA; clone cMWG0679.uni
          Length = 228

 Score =  194 bits (98), Expect = 2e-46
 Identities = 112/114 (98%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                       
Query: 466 tggggttagcctttgaggtgctccaccagtgcaacctcgtcgatcaccgggccacggctt 525
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 228 tggggttagcctt-gaggtgctccaccagtgcaacctcgtcgatcaccgggccacggct- 171

                                                                 
Query: 526 cgcgttcaccagcactgcctccttcttcatcatcgccagccgctctgggtttat 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cgcgttcaccagcactgcctccttcttcatcatcgccagccgctctgggtttat 117



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             complete sequence
          Length = 35954743

 Score =  176 bits (89), Expect = 5e-41
 Identities = 141/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                         
Query: 359   cttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctgg 418
             |||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || ||
Sbjct: 80726 cttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccggg 80785

                                                                         
Query: 419   cttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagcctt 478
             |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| |
Sbjct: 80786 cttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-t 80844

                                                  
Query: 479   tgaggtgctccaccagtgcaacctcgtcgatcaccgg 515
             ||||||||||||||||||| ||||| || ||||||||
Sbjct: 80845 tgaggtgctccaccagtgctacctcatcaatcaccgg 80881



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                         
Query: 198   ccgagttgcttggcgttaacgatgcttgggcaggcaggaggcggcgtcgcttcctcatcg 257
             |||||||| ||||| ||||| ||||| ||||| ||||  |||||||| || ||||| | |
Sbjct: 80193 ccgagttgtttggcattaacaatgctggggcaagcagctggcggcgttgcatcctccttg 80252

                                                                  
Query: 258   aggaagggctccaccgcgttcgggttcccccacaccgggtaccccttgatctt 310
             || || ||||||||    |||||||||||||| ||||| || |||||||||||
Sbjct: 80253 agaaatggctccactagattcgggttcccccaaaccggataacccttgatctt 80305



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 313   caagcacgttcagagcagcgagtgttgccatcccttcacgcgtccact 360
             |||| ||||| |||||||| ||||||||||| ||||| ||||||||||
Sbjct: 80479 caagaacgtttagagcagcaagtgttgccattccttcgcgcgtccact 80526



to top

>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1370C05
          Length = 148271

 Score =  176 bits (89), Expect = 5e-41
 Identities = 141/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                         
Query: 359   cttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctgg 418
             |||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || ||
Sbjct: 75335 cttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccggg 75394

                                                                         
Query: 419   cttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagcctt 478
             |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| |
Sbjct: 75395 cttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-t 75453

                                                  
Query: 479   tgaggtgctccaccagtgcaacctcgtcgatcaccgg 515
             ||||||||||||||||||| ||||| || ||||||||
Sbjct: 75454 tgaggtgctccaccagtgctacctcatcaatcaccgg 75490



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                         
Query: 198   ccgagttgcttggcgttaacgatgcttgggcaggcaggaggcggcgtcgcttcctcatcg 257
             |||||||| ||||| ||||| ||||| ||||| ||||  |||||||| || ||||| | |
Sbjct: 74802 ccgagttgtttggcattaacaatgctggggcaagcagctggcggcgttgcatcctccttg 74861

                                                                  
Query: 258   aggaagggctccaccgcgttcgggttcccccacaccgggtaccccttgatctt 310
             || || ||||||||    |||||||||||||| ||||| || |||||||||||
Sbjct: 74862 agaaatggctccactagattcgggttcccccaaaccggataacccttgatctt 74914



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 313   caagcacgttcagagcagcgagtgttgccatcccttcacgcgtccact 360
             |||| ||||| |||||||| ||||||||||| ||||| ||||||||||
Sbjct: 75088 caagaacgtttagagcagcaagtgttgccattccttcgcgcgtccact 75135



to top

>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1435_F07
          Length = 139041

 Score =  176 bits (89), Expect = 5e-41
 Identities = 141/157 (89%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                         
Query: 359   cttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctgg 418
             |||||| |||||||| |||||||| |||||||||||||||||||| ||||| || || ||
Sbjct: 29753 cttggaggcagatgcgatgtgaggtacgacgacggcattcttcatgtcagcgaggccggg 29812

                                                                         
Query: 419   cttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggttagcctt 478
             |||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||| |
Sbjct: 29813 cttcatgtaaggctcatcctcaaacacatcaagaccgacgcggaacatggggttggcc-t 29871

                                                  
Query: 479   tgaggtgctccaccagtgcaacctcgtcgatcaccgg 515
             ||||||||||||||||||| ||||| || ||||||||
Sbjct: 29872 tgaggtgctccaccagtgctacctcatcaatcaccgg 29908



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                         
Query: 198   ccgagttgcttggcgttaacgatgcttgggcaggcaggaggcggcgtcgcttcctcatcg 257
             |||||||| ||||| ||||| ||||| ||||| ||||  |||||||| || ||||| | |
Sbjct: 29220 ccgagttgtttggcattaacaatgctggggcaagcagctggcggcgttgcatcctccttg 29279

                                                                  
Query: 258   aggaagggctccaccgcgttcgggttcccccacaccgggtaccccttgatctt 310
             || || ||||||||    |||||||||||||| ||||| || |||||||||||
Sbjct: 29280 agaaatggctccactagattcgggttcccccaaaccggataacccttgatctt 29332



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 313   caagcacgttcagagcagcgagtgttgccatcccttcacgcgtccact 360
             |||| ||||| |||||||| ||||||||||| ||||| ||||||||||
Sbjct: 29506 caagaacgtttagagcagcaagtgttgccattccttcgcgcgtccact 29553



to top

>emb|AJ234417.1|HVU234417 Hordeum vulgare partial mRNA; clone cMWG0679.rev
          Length = 137

 Score =  131 bits (66), Expect = 3e-27
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactactaccccatgaagatgagtgcattcatacatatatactggcaaggagctatatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  tactactaccccatgaagatgagtgcattcatacatatatactggcaaggagctatatac 131

                 
Query: 61  gcatag 66
           ||||||
Sbjct: 132 gcatag 137



to top

>gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent hydroxypyruvate
            reductase mRNA, complete cds
          Length = 1492

 Score =  117 bits (59), Expect = 4e-23
 Identities = 149/179 (83%)
 Strand = Plus / Minus

                                                                        
Query: 294  gggtaccccttgatcttaccaagcacgttcagagcagcgagtgttgccatcccttcacgc 353
            |||||||| |||||||| || |||||||| ||||| || ||||| ||||| || ||||| 
Sbjct: 1087 gggtaccctttgatcttccccagcacgtttagagctgctagtgtagccattccctcacga 1028

                                                                        
Query: 354  gtccacttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagc 413
            ||||||||||| |||||||||||||| || || || | ||||||||||| ||| || |||
Sbjct: 1027 gtccacttggaggcagatgcaatgtggggtaccacaatggcattcttcaactctgcaagc 968

                                                                       
Query: 414  cctggcttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| ||||| |||||||| || || ||||| || || ||||| |||||
Sbjct: 967  ccgggtttcatgtagggctcttcctcaaacacgtcaaggcctactcgaaacatcgggtt 909



to top

>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete
            cds
          Length = 1576

 Score =  115 bits (58), Expect = 2e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                        
Query: 321  ttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatgtga 380
            ||||||||||| || || ||||| ||||| || |||||||| || ||||| |||||||| 
Sbjct: 1050 ttcagagcagctagagtcgccattccttcgcgagtccactttgaagcagaagcaatgtgg 991

                                                                        
Query: 381  ggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcctca 440
            |||||||| | |||||||||||| || || |||||||||||||||||||| || ||||| 
Sbjct: 990  ggcacgacaatggcattcttcatgtcggcaagccctggcttcatgtaaggttcgtcctcg 931

                                      
Query: 441  aaaacatcgaggccgacacggaacat 466
            || ||||| ||||| || ||||||||
Sbjct: 930  aagacatcaaggccaacccggaacat 905



to top

>gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent hydroxypyruvate
            reductase mRNA, complete cds
          Length = 1414

 Score =  111 bits (56), Expect = 3e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                        
Query: 294  gggtaccccttgatcttaccaagcacgttcagagcagcgagtgttgccatcccttcacgc 353
            |||||||| || | ||| || |||||||| ||||| || ||||| ||||| || ||||| 
Sbjct: 1085 gggtaccctttaaccttccccagcacgtttagagctgctagtgtagccattccctcacga 1026

                                                                        
Query: 354  gtccacttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagc 413
            ||||||||||| |||||||||||||| || || || | ||||||||||| ||| || |||
Sbjct: 1025 gtccacttggaggcagatgcaatgtggggtaccacaatggcattcttcaactctgcaagc 966

                                                                        
Query: 414  cctggcttcatgtaaggctcatcctcaaaaacatcgaggccgacacggaacatggggtta 473
            || || |||||||| ||||| |||||||| ||||| ||||| || || ||||| ||||||
Sbjct: 965  ccaggtttcatgtagggctcttcctcaaacacatcaaggcctactcgaaacattgggtta 906



to top

>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC
            1.1.1.29)
          Length = 1437

 Score =  107 bits (54), Expect = 4e-20
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                        
Query: 324  agagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatgtgaggc 383
            |||||||| ||||||||||| ||||| || ||||||||||| ||||| ||||||||||| 
Sbjct: 1053 agagcagccagtgttgccattccttcgcgagtccacttggaagcagaagcaatgtgagga 994

                                                                        
Query: 384  acgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcctcaaaa 443
            || | ||  || |||||||| ||||| || || || |||||||| || ||||||||||||
Sbjct: 993  acaatgatcgcgttcttcatatcagcaagtccaggtttcatgtatggttcatcctcaaaa 934

                                      
Query: 444  acatcgaggccgacacggaacatggg 469
            ||||| ||||| || || ||||||||
Sbjct: 933  acatcaaggccaactcgaaacatggg 908



to top

>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase,
            complete cds
          Length = 1362

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                        
Query: 339  gccatcccttcacgcgtccacttggacgcagatgcaatgtgaggcacgacgacggcattc 398
            ||||| |||||||| ||||||||||| || || ||||||||||| || | ||  ||||||
Sbjct: 1028 gccattccttcacgagtccacttggaagcggaagcaatgtgaggtacaatgatcgcattc 969

                                                                    
Query: 399  ttcatctcagccagccctggcttcatgtaaggctcatcctcaaaaacatcgaggcc 454
            ||||| ||||| ||||| || |||||||| || |||||||| || |||||||||||
Sbjct: 968  ttcatatcagcaagcccaggtttcatgtatggttcatcctcgaagacatcgaggcc 913



to top

>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase,
            complete cds
          Length = 1269

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                        
Query: 339  gccatcccttcacgcgtccacttggacgcagatgcaatgtgaggcacgacgacggcattc 398
            ||||| |||||||| ||||||||||| || || ||||||||||| || | ||  ||||||
Sbjct: 1028 gccattccttcacgagtccacttggaagcggaagcaatgtgaggtacaatgatcgcattc 969

                                                                    
Query: 399  ttcatctcagccagccctggcttcatgtaaggctcatcctcaaaaacatcgaggcc 454
            ||||| ||||| ||||| || |||||||| || |||||||| || |||||||||||
Sbjct: 968  ttcatatcagcaagcccaggtttcatgtatggttcatcctcgaagacatcgaggcc 913



to top

>dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate reductase, complete cds
          Length = 1428

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 127/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1099 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 1040

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||||| ||||| |||||||| |||||| | ||||| |||
Sbjct: 1039 tgaggaacaacaatagcgtttttcatatcagcaagccctggtttcatgaatggctcttcc 980

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 979  tcgaacacatcgagaccaactcggaacatcgggtt 945



to top

>ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, acting on the CH-OH group
            of donors, NAD or NADP as acceptor AT1G68010 (HPR) mRNA,
            complete cds
          Length = 1494

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1084 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 1025

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||| | ||||| |||||||| |||||| | ||||| |||
Sbjct: 1024 tgaggaacaacaatagcgtttttcgtatcagcaagccctggtttcatgaatggctcttcc 965

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 964  tcgaacacatcgagaccaactcggaacatcgggtt 930



to top

>gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate reductase (At1g68010)
            mRNA, complete cds
          Length = 1192

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1019 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 960

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||| | ||||| |||||||| |||||| | ||||| |||
Sbjct: 959  tgaggaacaacaatagcgtttttcgtatcagcaagccctggtttcatgaatggctcttcc 900

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 899  tcgaacacatcgagaccaactcggaacatcgggtt 865



to top

>gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate reductase HPR
            (At1g68010) mRNA, complete cds
          Length = 1417

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1084 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 1025

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||| | ||||| |||||||| |||||| | ||||| |||
Sbjct: 1024 tgaggaacaacaatagcgtttttcgtatcagcaagccctggtttcatgaatggctcttcc 965

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 964  tcgaacacatcgagaccaactcggaacatcgggtt 930



to top

>gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010)
            mRNA, complete cds
          Length = 1376

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1076 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 1017

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||| | ||||| |||||||| |||||| | ||||| |||
Sbjct: 1016 tgaggaacaacaatagcgtttttcgtatcagcaagccctggtttcatgaatggctcttcc 957

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 956  tcgaacacatcgagaccaactcggaacatcgggtt 922



to top

>gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010)
            mRNA, complete cds
          Length = 1194

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Minus

                                                                        
Query: 318  acgttcagagcagcgagtgttgccatcccttcacgcgtccacttggacgcagatgcaatg 377
            ||||| ||||| || || || ||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1019 acgttgagagctgcaagcgtagccattccttcacgagtccacttggaagcagaagcaatg 960

                                                                        
Query: 378  tgaggcacgacgacggcattcttcatctcagccagccctggcttcatgtaaggctcatcc 437
            ||||| || || |  || || ||| | ||||| |||||||| |||||| | ||||| |||
Sbjct: 959  tgaggaacaacaatagcgtttttcgtatcagcaagccctggtttcatgaatggctcttcc 900

                                               
Query: 438  tcaaaaacatcgaggccgacacggaacatggggtt 472
            || || |||||||| || || |||||||| |||||
Sbjct: 899  tcgaacacatcgagaccaactcggaacatcgggtt 865



to top

>emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS14ZG09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1321

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 109/133 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  ccatcccttcacgcgtccacttggacgcagatgcaatgtgaggcacgacgacggcattct 399
            |||| |||||||| ||||||||||| ||||| ||||||||||| || || |  || || |
Sbjct: 1027 ccattccttcacgagtccacttggaagcagaagcaatgtgaggaacaacaatagcgtttt 968

                                                                        
Query: 400  tcatctcagccagccctggcttcatgtaaggctcatcctcaaaaacatcgaggccgacac 459
            || | ||||| |||||||| |||||| | ||||| ||||| || |||||||| || || |
Sbjct: 967  tcgtatcagcaagccctggtttcatgaatggctcttcctcgaacacatcgagaccaactc 908

                         
Query: 460  ggaacatggggtt 472
            ||||||| |||||
Sbjct: 907  ggaacatcgggtt 895



to top

>ref|XM_366568.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
            (MG02644.4) partial mRNA
          Length = 2931

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 474  gcctttgaggtgctccaccag 494
            |||||||||||||||||||||
Sbjct: 2578 gcctttgaggtgctccaccag 2598



to top

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 426     taaggctcatcctcaaaaacatcga 450
               |||||||| ||||||||||||||||
Sbjct: 1676879 taaggctcttcctcaaaaacatcga 1676855



to top

>emb|X58542.1|CSHPRAG C.sativus hpr-A gene for NADH-dependent hydroxypyruvate reductase
          Length = 6740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 324  agagcagcgagtgttgccatcccttcacgcgtccact 360
            |||||||| ||||||||||| ||||| || |||||||
Sbjct: 4574 agagcagccagtgttgccattccttcgcgagtccact 4538



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 359  cttggacgcagatgcaatgtgaggcacgacgacggcattcttcatctcagccagccctgg 418
            |||||| ||||| ||||||||||| || | ||  || |||||||| ||||| || || ||
Sbjct: 4460 cttggaagcagaagcaatgtgaggaacaatgatcgcgttcttcatatcagcaagtccagg 4401

                                
Query: 419  cttcatgtaaggctcatcct 438
             |||||||| || |||||||
Sbjct: 4400 tttcatgtatggttcatcct 4381



to top

>ref|XM_483673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 426

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 ccttcatctccgcctccgcctccg 141
           |||||| |||||||||||||||||
Sbjct: 203 ccttcacctccgcctccgcctccg 226



to top

>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein
           (OSJNBb0044I14.6), mRNA
          Length = 1056

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gcaggcaggaggcggcgtcg 246
           ||||||||||||||||||||
Sbjct: 629 gcaggcaggaggcggcgtcg 648



to top

>ref|XM_463512.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ctccgcctccgcctccgtag 144
           ||||||||||||||||||||
Sbjct: 274 ctccgcctccgcctccgtag 255



to top

>ref|NM_190740.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2940

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 ccttcatctccgcctccgcctccg 141
           ||||| ||||||||||||||||||
Sbjct: 290 ccttcgtctccgcctccgcctccg 267



to top

>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tgcattcatacatatatact 43
              ||||||||||||||||||||
Sbjct: 139770 tgcattcatacatatatact 139789



to top

>ref|XM_385185.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05009.1)
           partial mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 4   tactaccccatgaagatgag 23
           ||||||||||||||||||||
Sbjct: 653 tactaccccatgaagatgag 672



to top

>emb|CR653454.2|CNS0F36C Tetraodon nigroviridis full-length cDNA
          Length = 723

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 542 gcctccttcttcatcatcgccagc 565
           |||||||||||||||| |||||||
Sbjct: 442 gcctccttcttcatcaccgccagc 419



to top

>gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 map 4, complete sequence
          Length = 244349

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 554    atcatcgccagccgctctgggttt 577
              |||||||||||||||| |||||||
Sbjct: 211073 atcatcgccagccgctgtgggttt 211050



to top

>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0044A10, from chromosome 10, complete sequence
          Length = 173374

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    gcaggcaggaggcggcgtcg 246
              ||||||||||||||||||||
Sbjct: 136736 gcaggcaggaggcggcgtcg 136755



to top

>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0044I14, from Chromosome 10, complete sequence
          Length = 63167

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   gcaggcaggaggcggcgtcg 246
             ||||||||||||||||||||
Sbjct: 39806 gcaggcaggaggcggcgtcg 39787



to top

>emb|BX088577.3| Mouse DNA sequence from clone RP23-58H16 on chromosome 4, complete
             sequence
          Length = 228379

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 554   atcatcgccagccgctctgggttt 577
             |||||||||||||||| |||||||
Sbjct: 96835 atcatcgccagccgctgtgggttt 96858



to top

>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tgcattcatacatatatact 43
             ||||||||||||||||||||
Sbjct: 11070 tgcattcatacatatatact 11089



to top

>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 427    aaggctcatcctcaaaaacatcgaggcc 454
              ||||| |||||||| |||||||||||||
Sbjct: 647546 aaggcccatcctcacaaacatcgaggcc 647519



to top

>gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G22, complete sequence
          Length = 88018

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  ggtaccccttgatcttacca 314
            ||||||||||||||||||||
Sbjct: 7864 ggtaccccttgatcttacca 7883



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      catctccgcctccgcctccg 141
                ||||||||||||||||||||
Sbjct: 21366036 catctccgcctccgcctccg 21366055



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      gcaggcaggaggcggcgtcg 246
                ||||||||||||||||||||
Sbjct: 13290487 gcaggcaggaggcggcgtcg 13290506



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 118      ccttcatctccgcctccgcctccg 141
                |||||| |||||||||||||||||
Sbjct: 27579059 ccttcacctccgcctccgcctccg 27579082



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 125      ctccgcctccgcctccgtag 144
                ||||||||||||||||||||
Sbjct: 37956404 ctccgcctccgcctccgtag 37956385



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 118      ccttcatctccgcctccgcctccg 141
                ||||| ||||||||||||||||||
Sbjct: 37448923 ccttcgtctccgcctccgcctccg 37448900



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     catctccgcctccgcctccg 141
               ||||||||||||||||||||
Sbjct: 4890566 catctccgcctccgcctccg 4890585



to top

>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0505D12
          Length = 146951

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   ccttcatctccgcctccgcctccg 141
             ||||| ||||||||||||||||||
Sbjct: 43460 ccttcgtctccgcctccgcctccg 43437



to top

>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A10
          Length = 137348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctccgcctccgcctccgtag 144
             ||||||||||||||||||||
Sbjct: 37348 ctccgcctccgcctccgtag 37329



to top

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    catctccgcctccgcctccg 141
              ||||||||||||||||||||
Sbjct: 135215 catctccgcctccgcctccg 135234



to top

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gcaggcaggaggcggcgtcg 246
              ||||||||||||||||||||
Sbjct: 895359 gcaggcaggaggcggcgtcg 895340



to top

>gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A16, complete sequence
          Length = 132916

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    ggtaccccttgatcttacca 314
              ||||||||||||||||||||
Sbjct: 110410 ggtaccccttgatcttacca 110391



to top

>emb|AL805898.11| Mouse DNA sequence from clone RP23-432F24 on chromosome 4, complete
              sequence
          Length = 215828

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    catctccgcctccgcctccg 141
              ||||||||||||||||||||
Sbjct: 123198 catctccgcctccgcctccg 123179



to top

>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   ccttcatctccgcctccgcctccg 141
             |||||| |||||||||||||||||
Sbjct: 61349 ccttcacctccgcctccgcctccg 61372



to top

>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full
           insert sequence
          Length = 2348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 ctccgcctccgcctccgtag 144
           ||||||||||||||||||||
Sbjct: 583 ctccgcctccgcctccgtag 564



to top

>dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O10, full
           insert sequence
          Length = 2012

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 catctccgcctccgcctccg 141
           ||||||||||||||||||||
Sbjct: 51  catctccgcctccgcctccg 70



to top

>dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N24, full
           insert sequence
          Length = 1991

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 catctccgcctccgcctccg 141
           ||||||||||||||||||||
Sbjct: 45  catctccgcctccgcctccg 64



to top

>ref|NM_208920.1| Eremothecium gossypii ACR165Wp (ACR165W), mRNA
          Length = 3420

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 427  aaggctcatcctcaaaaacatcgaggcc 454
            ||||| |||||||| |||||||||||||
Sbjct: 3318 aaggcccatcctcacaaacatcgaggcc 3291



to top

>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     cgagttgcttggcgttaacg 218
               ||||||||||||||||||||
Sbjct: 1799896 cgagttgcttggcgttaacg 1799915



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 227      gcaggcaggaggcggcgtcg 246
                ||||||||||||||||||||
Sbjct: 13297827 gcaggcaggaggcggcgtcg 13297846



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      catctccgcctccgcctccg 141
                ||||||||||||||||||||
Sbjct: 21292255 catctccgcctccgcctccg 21292274



to top

>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0648C09
          Length = 107522

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctccgcctccgcctccgtag 144
             ||||||||||||||||||||
Sbjct: 52680 ctccgcctccgcctccgtag 52661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,664,820
Number of Sequences: 3902068
Number of extensions: 4664820
Number of successful extensions: 98877
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98175
Number of HSP's gapped (non-prelim): 689
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top