| Clone Name | bags14g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470158.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 825 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 883 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 884 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 943 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 944 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 999
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 34521984 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 34521926 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 34521925 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 34521866 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 34521865 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 34521810
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4183 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 4241 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 4242 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 4301 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 4302 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 4357
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 34612056 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 34611998 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 34611997 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 34611938 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 34611937 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 34611882
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 121349 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 121407 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 121408 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 121467 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 121468 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 121523
>dbj|AK108175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A05, full insert sequence Length = 1264 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 896 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 954 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 955 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 1014 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1015 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 1070
>dbj|AK100515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100B19, full insert sequence Length = 2699 Score = 224 bits (113), Expect = 2e-55 Identities = 161/176 (91%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2464 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 2522 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 2523 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 2582 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttc 177 |||||||| |||| ||||||||||||||| |||||| |||||||| |||||||| Sbjct: 2583 agcaggagagggctgaggaggtcagcgaccttatctacaacttcatcaccaagttc 2638
>dbj|AK063239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G02, full insert sequence Length = 1293 Score = 208 bits (105), Expect = 1e-50 Identities = 150/164 (91%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 896 cggcgacctgacgtaccactacgccgg-catccaggactacctgcacaagggcgggctca 954 Query: 62 aggccgacgtgccgctgctggaggagctggtcgtcgtccccggcgccggccacttcatcc 121 ||||||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||| Sbjct: 955 aggccgaggtgccgctgctcgaggacgtcgtcgtcatccccggcgccggccacttcatcc 1014 Query: 122 agcaggagcgggcgcaggaggtcagcgaccacatctacgacttc 165 |||||||| |||| ||||||||||||||| |||||| ||||| Sbjct: 1015 agcaggagagggctgaggaggtcagcgaccttatctacaacttc 1058
>gb|AY105409.1| Zea mays PCO095801 mRNA sequence Length = 741 Score = 137 bits (69), Expect = 3e-29 Identities = 155/180 (86%), Gaps = 3/180 (1%) Strand = Plus / Plus Query: 2 cggcgacctgacgtaccactacgccgggnatccaggactacctgcacaagggcgggctca 61 ||||||||| || ||||||||| ||||| |||||||||||| | |||||||||||| || Sbjct: 447 cggcgacctcacctaccactac-ccgggcatccaggactacatccacaagggcgggttcg 505 Query: 62 aggccgacgtgccgctgctggaggagc-tggtcgtcgtccccggcgccggccacttcatc 120 |||||||||| ||| ||| ||| ||| | |||||| |||||||||||||||||||| || Sbjct: 506 aggccgacgtcccggggctcgag-agcgtcgtcgtcatccccggcgccggccacttcgtc 564 Query: 121 cagcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatcgccaagttctga 180 ||||||||| ||| | ||||||||| | |||||||||||||||||| ||||||||||| Sbjct: 565 cagcaggagaaggccgacgaggtcagccagcacatctacgacttcatctccaagttctga 624
>gb|AC122528.3| Mus musculus BAC clone RP24-506F15 from chromosome 9, complete sequence Length = 142071 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgt 400 ||||||||||||||||||||||| Sbjct: 85113 tgtgtatgtgtatgcccatgtgt 85091
>gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172752 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgt 400 ||||||||||||||||||||||| Sbjct: 7723 tgtgtatgtgtatgcccatgtgt 7701
>dbj|AK159069.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530049E07 product:unclassifiable, full insert sequence Length = 1266 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgt 400 ||||||||||||||||||||||| Sbjct: 162 tgtgtatgtgtatgcccatgtgt 184
>ref|XM_346332.2| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoparticle-associated protein (LOC367865), mRNA Length = 937 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 197 aaaagaaaagaaccagccgtgca 219 ||||||||||||||||||||||| Sbjct: 622 aaaagaaaagaaccagccgtgca 644
>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 149839 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgt 400 ||||||||||||||||||||||| Sbjct: 143507 tgtgtatgtgtatgcccatgtgt 143485
>ref|XM_465020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 387 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 agggcgggctcaaggccgacgt 71 |||||||||||||||||||||| Sbjct: 356 agggcgggctcaaggccgacgt 335
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 gtcgtcgtccccggcgccggcc 112 |||||||||||||||||||||| Sbjct: 4062137 gtcgtcgtccccggcgccggcc 4062158
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 agggcgggctcaaggccgacgt 71 |||||||||||||||||||||| Sbjct: 10959501 agggcgggctcaaggccgacgt 10959480
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 gtcgtcgtccccggcgccggcc 112 |||||||||||||||||||||| Sbjct: 105791 gtcgtcgtccccggcgccggcc 105812
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 agggcgggctcaaggccgacgt 71 |||||||||||||||||||||| Sbjct: 165700 agggcgggctcaaggccgacgt 165679
>gb|AC132304.3| Mus musculus BAC clone RP24-284M17 from 10, complete sequence Length = 191906 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 tttcgtactttcatttgttgtt 309 |||||||||||||||||||||| Sbjct: 115216 tttcgtactttcatttgttgtt 115195
>gb|AC140983.4| Mus musculus BAC clone RP23-167M17 from 18, complete sequence Length = 193004 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 tccaggactacctgcacaaggg 53 |||||||||||||||||||||| Sbjct: 134758 tccaggactacctgcacaaggg 134779
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321, complete sequence Length = 127049 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 tttcgtactttcatttgttgtt 309 |||||||||||||||||||||| Sbjct: 71710 tttcgtactttcatttgttgtt 71689
>gb|AC162379.2| Mus musculus BAC clone RP23-132A15 from chromosome 12, complete sequence Length = 238126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ggaaaagaaaagaaccagccg 215 ||||||||||||||||||||| Sbjct: 186416 ggaaaagaaaagaaccagccg 186436
>gb|AC164546.2| Mus musculus BAC clone RP24-189C11 from chromosome 17, complete sequence Length = 156583 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||||||| ||||||||| Sbjct: 88582 tgtgtatgtgtatgcacatgtgtat 88606
>ref|NM_193139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gtcgtcgtccccggcgccggc 111 ||||||||||||||||||||| Sbjct: 1137 gtcgtcgtccccggcgccggc 1117
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||||||| ||||||||| Sbjct: 1239110 tgtgtatgtgtatgcacatgtgtat 1239134
>gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, complete sequence Length = 169078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 agaaggaaaagaaaagaacca 211 ||||||||||||||||||||| Sbjct: 54930 agaaggaaaagaaaagaacca 54910
>gb|AC164292.4| Mus musculus BAC clone RP24-177C20 from chromosome 3, complete sequence Length = 185822 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||| ||||||||||||| Sbjct: 40582 tgtgtatgtgtgtgcccatgtgtat 40606
>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence Length = 138043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgt 398 ||||||||||||||||||||| Sbjct: 113413 tgtgtatgtgtatgcccatgt 113433
>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence Length = 161008 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||||||| ||||||||| Sbjct: 100674 tgtgtatgtgtatgcacatgtgtat 100698
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ccggccacttcatccagcagg 127 ||||||||||||||||||||| Sbjct: 208520 ccggccacttcatccagcagg 208500
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 ctggaggagctggtcgtcgtccccggcgc 107 ||||| || |||||||||||||||||||| Sbjct: 55376 ctggaagacctggtcgtcgtccccggcgc 55404
>gb|AC107667.12| Mus musculus chromosome 3, clone RP23-187C2, complete sequence Length = 229632 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||| ||||||||||||| Sbjct: 169754 tgtgtatgtgtgtgcccatgtgtat 169778
>ref|XM_849906.1| PREDICTED: Canis familiaris similar to leucine rich repeat neuronal 6C (LOC612172), mRNA Length = 1779 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctgg 91 ||||||||||||||||||||| Sbjct: 230 tgccgctgctggaggagctgg 250
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence Length = 207475 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 |||||||||||||||||| |||||| Sbjct: 99960 tgtgtatgtgtatgcccaggtgtat 99936 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 99782 tgtgtgtgtgtatgcccatgtgtat 99758 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 99745 tgtgtgtgtgtatgcccatgtgtat 99721 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 99536 tgtgtgtgtgtatgcccatgtgtat 99512
>gb|AC129607.3| Mus musculus BAC clone RP23-133N3 from 5, complete sequence Length = 186120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tatgtgtatgcccatgtgtat 402 ||||||||||||||||||||| Sbjct: 61167 tatgtgtatgcccatgtgtat 61187
>gb|AC161149.6| Mus musculus BAC clone RP23-350B16 from chromosome 1, complete sequence Length = 217329 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 ctgtgtatgtgtatgcccatgtgtatttc 405 |||||||||||| |||| ||||||||||| Sbjct: 85385 ctgtgtatgtgtgtgcctatgtgtatttc 85413
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 ctggaggagctggtcgtcgtccccggcgc 107 ||||| || |||||||||||||||||||| Sbjct: 38971 ctggaagacctggtcgtcgtccccggcgc 38999
>dbj|AB168550.1| Macaca fascicularis testis cDNA clone: QtsA-12966, similar to human COX10 homolog, cytochrome c oxidase assembly protein,heme A: farnesyltransferase (yeast) (COX10), nuclear geneencoding mitochondrial protein, mRNA, RefSeq: NM_001303.2 Length = 2426 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 agctgtgtatgtgtatgcccatgtg 399 |||||||||||||||| |||||||| Sbjct: 1256 agctgtgtatgtgtatacccatgtg 1232
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctgg 91 ||||||||||||||||||||| Sbjct: 1206168 tgccgctgctggaggagctgg 1206188
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gtcgtcgtccccggcgccggc 111 ||||||||||||||||||||| Sbjct: 26342009 gtcgtcgtccccggcgccggc 26341989
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cgacgtgccgctgctggagga 86 ||||||||||||||||||||| Sbjct: 8947641 cgacgtgccgctgctggagga 8947621
>ref|XM_235782.3| PREDICTED: Rattus norvegicus kelch repeat and BTB (POZ) domain containing 3 (predicted) (Kbtbd3_predicted), mRNA Length = 1850 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 actttcatttgttgttcaaat 314 ||||||||||||||||||||| Sbjct: 553 actttcatttgttgttcaaat 573
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gtcgtcgtccccggcgccggc 111 ||||||||||||||||||||| Sbjct: 61587 gtcgtcgtccccggcgccggc 61567
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ggccgacgtgccgctgctgga 83 ||||||||||||||||||||| Sbjct: 5092818 ggccgacgtgccgctgctgga 5092838
>ref|NM_211329.1| Eremothecium gossypii AFR427Wp (AFR427W), mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctgg 91 ||||||||||||||||||||| Sbjct: 377 tgccgctgctggaggagctgg 397
>emb|AL390334.4|CNS06C7N Human chromosome 14 DNA sequence BAC R-664B22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170011 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||| ||||||||||||| Sbjct: 67345 tgtgtatgtgtgtgcccatgtgtat 67321
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 gctcaaggccgacgtgccgctgctg 81 ||||||||||| ||||||||||||| Sbjct: 740400 gctcaaggccggcgtgccgctgctg 740376 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccaggactacctgcacaagg 52 |||||||||||||||||||| Sbjct: 3745350 ccaggactacctgcacaagg 3745369
>gb|AY098527.1| Ananas comosus epoxide hydrolase mRNA, complete cds Length = 1199 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 112 cacttcatccagcaggagcgggcgcaggaggtcagcgaccacatctacgacttcatc 168 |||||||||||||||||| |||| |||| || | || ||||||||| |||||||| Sbjct: 973 cacttcatccagcaggagagggcagaggaagttactgatcacatctacaacttcatc 1029
>gb|AC133168.3| Mus musculus BAC clone RP24-217I2 from 1, complete sequence Length = 169783 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 ctgtgtatgtgtatgcccatgtgtatttc 405 |||||||||||| |||| ||||||||||| Sbjct: 162347 ctgtgtatgtgtgtgcctatgtgtatttc 162375
>gb|AC173339.1| Mus musculus BAC clone RP24-221C22 from chromosome 17, complete sequence Length = 166061 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||||||| ||||||||| Sbjct: 128537 tgtgtatgtgtatgcacatgtgtat 128513
>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete sequence Length = 177627 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgt 398 ||||||||||||||||||||| Sbjct: 167090 tgtgtatgtgtatgcccatgt 167110
>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence Length = 239743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 |||||||||||||||||| |||||| Sbjct: 223404 tgtgtatgtgtatgcccaggtgtat 223380 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 223152 tgtgtgtgtgtatgcccatgtgtat 223128 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 223115 tgtgtgtgtgtatgcccatgtgtat 223091 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||| ||||||||||||||||||| Sbjct: 222906 tgtgtgtgtgtatgcccatgtgtat 222882
>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete sequence Length = 200480 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatgtgtat 402 ||||||||||||||| ||||||||| Sbjct: 96088 tgtgtatgtgtatgcacatgtgtat 96064
>ref|NM_188701.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1050 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 58 ggtcgtcgtccccggcgccg 39
>ref|NM_196951.1| Oryza sativa (japonica cultivar-group) putative peptide transport protein (OSJNBa0079L16.9), mRNA Length = 1824 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 32 tcgtcgtccccggcgccggc 13
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 49267 tcgtcgtccccggcgccggc 49248
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatg 397 |||||||||||||||||||| Sbjct: 1093303 tgtgtatgtgtatgcccatg 1093322
>gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosynthetic gene cluster, complete sequence Length = 48200 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 24865 tgccgctgctggaggagctg 24884
>gb|AC099033.2| Drosophila melanogaster clone BACR14N05, complete sequence Length = 170313 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 110971 tgccgctgctggaggagctg 110952
>gb|DQ453511.1| Sus scrofa breed Large White prolactin receptor (PRLR) gene, partial cds Length = 1982 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 gagaaggaaaagaaaagaaccagc 213 ||||||||||||| |||||||||| Sbjct: 1554 gagaaggaaaagacaagaaccagc 1577
>gb|AY658261.1| Synthetic construct Peudomonas aeruginosa clone FLH052640.01F PA4511 gene, partial cds Length = 756 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aggccgacgtgccgctgctg 81 |||||||||||||||||||| Sbjct: 488 aggccgacgtgccgctgctg 507
>ref|XM_954867.1| Neurospora crassa OR74A hypothetical protein (NCU06098.1) partial mRNA Length = 2439 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccccggcgccggccacttca 118 |||||||||||||||||||| Sbjct: 443 ccccggcgccggccacttca 462
>ref|XM_325952.1| Neurospora crassa OR74A hypothetical protein (NCU06098.1) partial mRNA Length = 2439 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccccggcgccggccacttca 118 |||||||||||||||||||| Sbjct: 443 ccccggcgccggccacttca 462
>gb|AC101915.7| Mus musculus chromosome 1, clone RP24-388P13, complete sequence Length = 207724 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ctgtgtatgtgtatgcccat 396 |||||||||||||||||||| Sbjct: 21685 ctgtgtatgtgtatgcccat 21704
>ref|XM_741556.1| Aspergillus fumigatus Af293 golgi membrane protein (Afu4g04630) partial mRNA Length = 954 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgctgctggaggagctgg 91 |||||||||||||||||||| Sbjct: 303 gccgctgctggaggagctgg 322
>emb|CT009544.6| Mouse DNA sequence from clone RP23-32E1 on chromosome 13, complete sequence Length = 158218 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 gtatgtgtatgcccatgtgtattt 404 |||||||||||| ||||||||||| Sbjct: 128229 gtatgtgtatgctcatgtgtattt 128252
>gb|AC130544.3| Mus musculus BAC clone RP24-209I17 from chromosome 19, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 atgtgtatgcccatgtgtat 402 |||||||||||||||||||| Sbjct: 81360 atgtgtatgcccatgtgtat 81379
>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence Length = 193255 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgtgtatgtgtatgcccatg 397 |||||||||||||||||||| Sbjct: 161502 tgtgtatgtgtatgcccatg 161483
>gb|AC126030.3| Mus musculus BAC clone RP23-452N11 from chromosome 16, complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 caggactacctgcacaaggg 53 |||||||||||||||||||| Sbjct: 147811 caggactacctgcacaaggg 147830
>gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, complete sequence Length = 217046 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 caggactacctgcacaaggg 53 |||||||||||||||||||| Sbjct: 5124 caggactacctgcacaaggg 5143
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgta 401 ||||||||||||||| |||||||| Sbjct: 70647 tgtgtatgtgtatgctcatgtgta 70670
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgcaggaggtcagcgacca 152 |||||||||||||||||||| Sbjct: 3906410 gcgcaggaggtcagcgacca 3906391
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagaaggaaaagaaaagaac 209 |||||||||||||||||||| Sbjct: 109094 gagaaggaaaagaaaagaac 109075
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 atgtgtatgcccatgtgtat 402 |||||||||||||||||||| Sbjct: 53477 atgtgtatgcccatgtgtat 53496
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 86295 ggtcgtcgtccccggcgccg 86314
>gb|AC074111.2| Arabidopsis thaliana chromosome 1 BAC T18N24 genomic sequence, complete sequence Length = 98536 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgagaaggaaaagaaaagaa 208 |||||||||||||||||||| Sbjct: 74920 tgagaaggaaaagaaaagaa 74939
>gb|AC161479.5| Pan troglodytes BAC clone CH251-168J1 from chromosome unknown, complete sequence Length = 206985 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgta 401 ||||||||||||||| |||||||| Sbjct: 53079 tgtgtatgtgtatgcacatgtgta 53102
>ref|NM_206162.1| Drosophila melanogaster scribbler CG5580-RC, transcript variant C (sbb), mRNA Length = 3071 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1785 tgccgctgctggaggagctg 1766
>ref|NM_206161.1| Drosophila melanogaster scribbler CG5580-RB, transcript variant B (sbb), mRNA Length = 3198 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1912 tgccgctgctggaggagctg 1893
>gb|AY094793.1| Drosophila melanogaster LD21711 full insert cDNA Length = 1941 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 637 tgccgctgctggaggagctg 618
>ref|NM_079939.2| Drosophila melanogaster scribbler CG5580-RA, transcript variant A (sbb), mRNA Length = 8136 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1785 tgccgctgctggaggagctg 1766
>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128500 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 agctgtgtatgtgtatgcccatgt 398 |||||| ||||||||||||||||| Sbjct: 10273 agctgtttatgtgtatgcccatgt 10296
>gb|AY069769.1| Drosophila melanogaster SD01229 full length cDNA Length = 7138 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 782 tgccgctgctggaggagctg 763
>gb|AC155295.2| Mus musculus BAC clone RP24-329L16 from chromosome 13, complete sequence Length = 166534 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 gtatgtgtatgcccatgtgtattt 404 |||||||||||| ||||||||||| Sbjct: 34590 gtatgtgtatgctcatgtgtattt 34567
>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence Length = 223196 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ttagttcatctcctcagttg 341 |||||||||||||||||||| Sbjct: 179152 ttagttcatctcctcagttg 179133
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 96633 tcgtcgtccccggcgccggc 96652
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 32316712 ggtcgtcgtccccggcgccg 32316731
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 16859612 tcgtcgtccccggcgccggc 16859593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 2770941 tcgtcgtccccggcgccggc 2770922
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 7711691 ggtcgtcgtccccggcgccg 7711672
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 aaggccgacgtgccgctgctggag 84 ||||||||| |||||||||||||| Sbjct: 21386 aaggccgacatgccgctgctggag 21363
>gb|AC097523.4| Homo sapiens BAC clone RP11-597P14 from 2, complete sequence Length = 108711 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 ctgtgtatgtgtatgcccatgtgt 400 |||||||||||||||| ||||||| Sbjct: 57134 ctgtgtatgtgtatgcacatgtgt 57111
>gb|AC093698.5| Homo sapiens BAC clone RP11-806A20 from 2, complete sequence Length = 136220 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 tgtatgtgtatgcccatgtgtatt 403 ||||||||| |||||||||||||| Sbjct: 111944 tgtatgtgtgtgcccatgtgtatt 111967
>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence Length = 191617 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gaaggaaaagaaaagaacca 211 |||||||||||||||||||| Sbjct: 104233 gaaggaaaagaaaagaacca 104214
>gb|AC159464.1| Pan troglodytes BAC clone CH251-505P8 from chromosome unknown, complete sequence Length = 175216 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 tgtgtatgtgtatgcccatgtgta 401 ||||||||||||||| |||||||| Sbjct: 148629 tgtgtatgtgtatgcacatgtgta 148652
>gb|AC012152.13| Homo sapiens 3 BAC CTC-552C10 (Cal Tech Human BAC Library C) complete sequence Length = 180194 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 agctgtgtatgtgtatgcccatgt 398 |||||| ||||||||||||||||| Sbjct: 175311 agctgtttatgtgtatgcccatgt 175334
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 44064 tcgtcgtccccggcgccggc 44045
>gb|AE004864.1| Pseudomonas aeruginosa PAO1, section 425 of 529 of the complete genome Length = 10976 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aggccgacgtgccgctgctg 81 |||||||||||||||||||| Sbjct: 10395 aggccgacgtgccgctgctg 10376
>ref|XM_345835.2| PREDICTED: Rattus norvegicus ribosomal protein L38 (predicted) (Rpl38_predicted), mRNA Length = 1053 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgctgctggaggagctgg 91 |||||||||||||||||||| Sbjct: 691 gccgctgctggaggagctgg 710
>gb|AF247563.1|AF247563 Drosophila melanogaster Scribbler short isoform (sbb) mRNA, complete cds Length = 3836 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 2533 tgccgctgctggaggagctg 2514
>gb|AF247562.1|AF247562 Drosophila melanogaster Scribbler long isoform (sbb) mRNA, complete cds Length = 10274 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 3842 tgccgctgctggaggagctg 3823
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 14272 ggtcgtcgtccccggcgccg 14253
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 122267 ggtcgtcgtccccggcgccg 122248
>gb|AF242194.1|AF242194 Drosophila melanogaster brakeless-B (Bks) mRNA, complete cds; alternatively spliced Length = 8116 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1759 tgccgctgctggaggagctg 1740
>gb|AF242193.1|AF242193 Drosophila melanogaster brakeless-A (Bks) mRNA, complete cds; alternatively spliced Length = 3062 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1759 tgccgctgctggaggagctg 1740
>gb|AF238858.1|AF238858 Drosophila melanogaster brakeless protein mRNA, complete cds Length = 3063 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1756 tgccgctgctggaggagctg 1737
>gb|AF220145.1|AF220145 Drosophila melanogaster Scribbler (sbb) mRNA, complete cds Length = 3665 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 2362 tgccgctgctggaggagctg 2343
>gb|AC155838.7| Mus musculus 6 BAC RP24-441P8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196288 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tgaacaacatctgagaagga 197 |||||||||||||||||||| Sbjct: 39849 tgaacaacatctgagaagga 39830
>gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28L22 genomic sequence, complete sequence Length = 134499 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgagaaggaaaagaaaagaa 208 |||||||||||||||||||| Sbjct: 785 tgagaaggaaaagaaaagaa 804
>dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A02, full insert sequence Length = 2061 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 120 tcgtcgtccccggcgccggc 101
>gb|AC117766.6| Mus musculus chromosome 1, clone RP24-507L6, complete sequence Length = 190180 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ttagttcatctcctcagttg 341 |||||||||||||||||||| Sbjct: 183839 ttagttcatctcctcagttg 183858
>dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A04, full insert sequence Length = 2055 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 120 tcgtcgtccccggcgccggc 101
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggtcgtcgtccccggcgccg 109 |||||||||||||||||||| Sbjct: 31654 ggtcgtcgtccccggcgccg 31673
>gb|AE003800.4| Drosophila melanogaster chromosome 2R, section 50 of 73 of the complete sequence Length = 255380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 229319 tgccgctgctggaggagctg 229338
>gb|BT001722.1| Drosophila melanogaster RE69316 full insert cDNA Length = 3096 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 1786 tgccgctgctggaggagctg 1767
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcgtcgtccccggcgccggc 111 |||||||||||||||||||| Sbjct: 16868652 tcgtcgtccccggcgccggc 16868633
>gb|AC004295.1|AC004295 Drosophila melanogaster DNA sequence (P1 DS08374 (D180)), complete sequence Length = 84551 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 77028 tgccgctgctggaggagctg 77047
>gb|AC124718.4| Mus musculus BAC clone RP23-373N7 from 1, complete sequence Length = 201807 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ttagttcatctcctcagttg 341 |||||||||||||||||||| Sbjct: 79919 ttagttcatctcctcagttg 79938
>gb|AC101951.11| Mus musculus chromosome 1, clone RP24-153P16, complete sequence Length = 174693 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ctgtgtatgtgtatgcccat 396 |||||||||||||||||||| Sbjct: 30973 ctgtgtatgtgtatgcccat 30954
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tctgagaaggaaaagaaaag 206 |||||||||||||||||||| Sbjct: 69190 tctgagaaggaaaagaaaag 69209
>dbj|AB044403.1| Drosophila melanogaster mtv mRNA for master of thick veins, complete cds Length = 8394 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgccgctgctggaggagctg 90 |||||||||||||||||||| Sbjct: 2584 tgccgctgctggaggagctg 2565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,381,883 Number of Sequences: 3902068 Number of extensions: 4381883 Number of successful extensions: 138404 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 137277 Number of HSP's gapped (non-prelim): 1120 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)