| Clone Name | rbaal9l01 |
|---|---|
| Clone Library Name | barley_pub |
>NCKX6_RAT (Q6AXS0) Sodium/potassium/calcium exchanger 6 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 6) (Solute carrier family 24 member 6) Length = 585 Score = 75.9 bits (185), Expect = 7e-14 Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Frame = -3 Query: 554 SILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 ++LGLT+LAWGNS+GD S+ LA G ++A S C+ G +FN L G+G+ LL Sbjct: 456 TVLGLTLLAWGNSIGDAFSDFTLARQGYP--RMAFSACFGGIIFNILVGVGLGCLLQIVR 513 Query: 374 TAPTSYVLPQDRSLIYTM-SFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRV 198 + + L D L++ + S L LV++LV++P + +K G+ L+ Y F+ + + Sbjct: 514 SHASEVKLEPDGLLVWVLASALGLSLVFSLVSVPLQCFQLSKAYGLCLLLFYICFIVVVL 573 Query: 197 SSAMGILPL 171 + G++ L Sbjct: 574 LTEFGVIHL 582
>NCKX6_MOUSE (Q925Q3) Sodium/potassium/calcium exchanger 6 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 6) (Solute carrier family 24 member 6) Length = 585 Score = 75.1 bits (183), Expect = 1e-13 Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Frame = -3 Query: 554 SILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 ++LGLT+LAWGNS+GD S+ LA G ++A S C+ G +FN L G+G+ LL Sbjct: 456 TVLGLTLLAWGNSIGDAFSDFTLARQGYP--RMAFSACFGGIIFNILVGVGLGCLLQIIR 513 Query: 374 TAPTSYVLPQDRSLIYTM-SFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRV 198 L D L++ + S L L+++LV++P + +K G+ L+ Y FL + + Sbjct: 514 NHVVEVKLEPDGLLVWVLASALGLSLIFSLVSVPLQCFQLSKAYGLCLLLFYICFLVVVL 573 Query: 197 SSAMGILPL 171 + G++ L Sbjct: 574 LTEFGVIHL 582
>NCKX6_HUMAN (Q6J4K2) Sodium/potassium/calcium exchanger 6 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 6) (Solute carrier family 24 member 6) Length = 584 Score = 73.9 bits (180), Expect = 3e-13 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Frame = -3 Query: 554 SILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 ++LGLT+LAWGNS+GD S+ LA G ++A S C+ G +FN L G+G+ LL S Sbjct: 456 TVLGLTLLAWGNSIGDAFSDFTLARQGYP--RMAFSACFGGIIFNILVGVGLGCLLQI-S 512 Query: 374 TAPTSYVLPQDRSLIYTMS-FLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRV 198 + T L D L++ ++ L LV++LV++P + ++ G L+ Y FL + + Sbjct: 513 RSHTEVKLEPDGLLVWVLAGALGLSLVFSLVSVPLQCFQLSRVYGFCLLLFYLNFLVVAL 572 Query: 197 SSAMGILPLPGL 162 + G++ L + Sbjct: 573 LTEFGVIHLKSM 584
>NCX7_CAEEL (P34322) Putative sodium/calcium exchanger 7 precursor| (Na(+)/Ca(2+)-exchange protein 7) Length = 691 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWST 372 +LGLT+LAW NS+GDL+++V++ G ++AM+ GP+FN L G G+ + Sbjct: 568 VLGLTILAWSNSIGDLIADVSVVKQGYP--RMAMAAAIGGPLFNLLMGFGLPFTIAKLQG 625 Query: 371 APTSYVL-PQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 S + P R LI FL L+ L+ +P R + LI++Y F+ + Sbjct: 626 KYISMTINPTYRLLIL---FLAISLLATLIGIPVQKFRLQRPHAAVLISIYIAFIVFVIL 682 Query: 194 SAMGIL 177 S G+L Sbjct: 683 SETGVL 688
>NCKX3_HUMAN (Q9HC58) Sodium/potassium/calcium exchanger 3 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Solute carrier family 24 member 3) Length = 644 Score = 58.9 bits (141), Expect = 9e-09 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+G+T LA G S+ D M+++ +A G GD +A+S +F+ L GLG+ L + Sbjct: 511 IMGITFLAAGTSVPDCMASLIVARQGMGD---MAVSNSIGSNVFDILIGLGLPWALQTLA 567 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 SY+ R LIY++ L+A + + + + + +K LG G + LY VFL + Sbjct: 568 VDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLLLYGVFLCFSIM 627 Query: 194 SAMGILPLPGL 162 + + L Sbjct: 628 TEFNVFTFVNL 638
>NCKX3_RAT (Q9EPQ0) Sodium/potassium/calcium exchanger 3 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Fragment) Length = 624 Score = 58.5 bits (140), Expect = 1e-08 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+G+T LA G S+ D M+++ +A G GD +A+S +F+ L GLG+ L + Sbjct: 492 IMGITFLAAGTSVPDCMASLIVARQGMGD---MAVSNSIGSNVFDILIGLGLPWALQTLA 548 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 SY+ R LIY++ L+A + + + + + +K LG G + LY VFL + Sbjct: 549 VDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLCFSIM 608 Query: 194 SAMGILPLPGL 162 + + L Sbjct: 609 TEFNVFTFVNL 619
>NCX6_CAEEL (P34315) Putative sodium/calcium exchanger 6 precursor| (Na(+)/Ca(2+)-exchange protein 6) Length = 590 Score = 58.5 bits (140), Expect = 1e-08 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWST 372 +LGLT+LAW NS+GDL+++V++A G ++AM+ G +FN L G G+ + Sbjct: 467 VLGLTILAWSNSIGDLIADVSVAKQGYP--RMAMAAAIGGQLFNLLIGFGLPFTIAKIQG 524 Query: 371 APTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALY-SVFLFIRVS 195 S ++ L+ M FL L++ L+ + + L+ +Y S F+FI +S Sbjct: 525 KSISMIINPTYRLL--MLFLAISLIFTLIAMFAQKYFLRRIHSYSLVFIYISFFVFIGLS 582
>NCKX3_MOUSE (Q99PD7) Sodium/potassium/calcium exchanger 3 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 3) Length = 645 Score = 58.5 bits (140), Expect = 1e-08 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+G+T LA G S+ D M+++ +A G GD +A+S +F+ L GLG+ L + Sbjct: 513 IMGITFLAAGTSVPDCMASLIVARQGMGD---MAVSNSIGSNVFDILIGLGLPWALQTLA 569 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 SY+ R LIY++ L+A + + + + + +K LG G + LY VFL + Sbjct: 570 VDYGSYIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLCFSIM 629 Query: 194 SAMGILPLPGL 162 + + L Sbjct: 630 TEFNVFTFVNL 640
>NCKX4_MOUSE (Q8CGQ8) Sodium/potassium/calcium exchanger 4 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 4) Length = 605 Score = 52.8 bits (125), Expect = 7e-07 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+G+T LA G S+ D M+++ +A G GD +A+S +F+ L GLGI L Sbjct: 471 IMGITFLAAGTSVPDCMASLIVARQGLGD---MAVSNTIGSNVFDILVGLGIPWGLQTMV 527 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFL 210 S V R L+Y++ L+ + ++ + + R ++ LG+ ++ LY+VFL Sbjct: 528 INYGSTVKINSRGLVYSVVLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFL 582
>NCKX4_HUMAN (Q8NFF2) Sodium/potassium/calcium exchanger 4 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 4) (Solute carrier family 24 member 4) Length = 605 Score = 52.8 bits (125), Expect = 7e-07 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+G+T LA G S+ D M+++ +A G GD +A+S +F+ L GLG+ L Sbjct: 471 IMGITFLAAGTSVPDCMASLIVARQGLGD---MAVSNTIGSNVFDILVGLGVPWGLQTMV 527 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFL 210 S V R L+Y++ L+ + ++ + + R ++ LGV ++ LY++FL Sbjct: 528 VNYGSTVKINSRGLVYSVVLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAIFL 582
>NCKX1_CHICK (Q9IAL8) Sodium/potassium/calcium exchanger 1 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 663 Score = 52.0 bits (123), Expect = 1e-06 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + L + Sbjct: 536 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPVPWFLYSVF 592 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 S V L + L L++ ++++ + NK LGV + ALY VFL I V Sbjct: 593 NG-FSPVAVSSNGLFCAIVLLFLMLLFVIISIALCKWKMNKILGVTMFALYFVFLIISVM 651 Query: 194 SAMGILPLP 168 I+ P Sbjct: 652 LEDRIISCP 660
>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1181 Score = 48.9 bits (115), Expect = 1e-05 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + LL + Sbjct: 1054 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPVPWLLFSLI 1110 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 A + L + L L++ + ++ R NK LG + LY VFL I V Sbjct: 1111 NA-LQPIPVSSNGLFCAIVLLFLMLLFVIFSIASCKWRMNKILGFTMFLLYFVFLVISVM 1169 Query: 194 SAMGILPLP 168 I+ P Sbjct: 1170 LEDRIISCP 1178
>ECM27_YEAST (P47144) Extracellular matrix protein 27| Length = 725 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 13/69 (18%) Frame = -3 Query: 554 SILGLTVLAWGNSMGDLMSNVALA------MNGGDGVQIA-------MSGCYAGPMFNTL 414 +ILGLT+ AWGNS+GDL+SN+++ + D V++A + C G M N++ Sbjct: 565 AILGLTIFAWGNSVGDLISNISMCRLYKTQTHYQDRVRLATKFFMISCASCLGGVMLNSM 624 Query: 413 AGLGISMLL 387 G+G S L+ Sbjct: 625 GGIGFSGLV 633
>NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1099 Score = 47.8 bits (112), Expect = 2e-05 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + LL + Sbjct: 972 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPVPWLLFSLI 1028 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 V L + L L++ + ++ R NK LG + LY VFL I V Sbjct: 1029 NG-LQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVM 1087 Query: 194 SAMGILPLP 168 I+ P Sbjct: 1088 LEDRIISCP 1096
>NCKX2_CHICK (Q9IAL7) Sodium/potassium/calcium exchanger 2 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone Na-Ca+K exchanger) Length = 651 Score = 47.8 bits (112), Expect = 2e-05 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + LL A Sbjct: 524 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPLPWLLYA-V 579 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRV 198 S V L + L L++ ++++ R NK LG + LY VFL + V Sbjct: 580 INNFSPVTVSSNGLFCAIVLLFIMLLFVILSIAFCKWRMNKFLGFLMFGLYFVFLIVSV 638
>NCKX1_BOVIN (Q28139) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1216 Score = 47.0 bits (110), Expect = 4e-05 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + +L + Sbjct: 1089 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPLPWMLFSLI 1145 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 V L + L L++ + ++ R NK LG + LY VFL I V Sbjct: 1146 NG-LQPVAVSSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFLLYFVFLIISVM 1204 Query: 194 SAMGILPLP 168 I+ P Sbjct: 1205 LEDRIISCP 1213
>NCKX2_HUMAN (Q9UI40) Sodium/potassium/calcium exchanger 2 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone Na-Ca+K exchanger) (Solute carrier family 24 member 2) Length = 661 Score = 46.2 bits (108), Expect = 6e-05 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + LL Sbjct: 534 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPLPWLLYT-V 589 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 V L + L L++ ++++ R NK LG + LY VFL + V Sbjct: 590 IHRFQPVAVSSNGLFCAIVLLFIMLLFVILSIALCKWRMNKILGFIMFGLYFVFLVVSVL 649 Query: 194 SAMGILPLP 168 IL P Sbjct: 650 LEDRILTCP 658
>NCKX2_RAT (O54701) Sodium/potassium/calcium exchanger 2 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone Na-Ca+K exchanger) Length = 670 Score = 45.1 bits (105), Expect = 1e-04 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 1/129 (0%) Frame = -3 Query: 551 ILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWS 375 I+GLT+LA G S+ DL+++V +A G GD +A+S +F+ GL + LL Sbjct: 543 IMGLTILAAGTSIPDLITSVIVARKGLGD---MAVSSSVGSNIFDITVGLPLPWLLYT-I 598 Query: 374 TAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRVS 195 V L + L L++ ++++ R NK LG + LY FL + V Sbjct: 599 IHRFKPVTVSSNGLFCAIVLLFIMLIFVILSIALCKWRMNKILGFIMFGLYFAFLVVSVL 658 Query: 194 SAMGILPLP 168 +L P Sbjct: 659 LEDKVLECP 667
>NCKX5_MOUSE (Q8C261) Sodium/potassium/calcium exchanger 5 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 5) (Solute carrier family 24 member 5) Length = 501 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 1/127 (0%) Frame = -3 Query: 554 SILGLTVLAWGNSMGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAW 378 +++GLT+LA G S+ D +++V +A G GD +A+S +F+ L LG+ + Sbjct: 369 TVMGLTLLAAGTSIPDTVTSVLVARKGKGD---MAISNIVGSNVFDMLC-LGLPWFIKTA 424 Query: 377 STAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIRV 198 T ++ + + L Y L +++ + + +G + ++ LGV + LY + V Sbjct: 425 FTNASAPIEVNSKGLTYITISLNISILFLFLAVHFNGWKLDRKLGVVCLVLYLGLATLSV 484 Query: 197 SSAMGIL 177 +GI+ Sbjct: 485 LYEIGII 491
>BETP_CORGL (P54582) Glycine betaine transporter betP| Length = 595 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -3 Query: 428 MFNTLAGLGISML-LGAWSTAPTSYVLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNK 252 +F T LG+ L +GA +A P D +++ +S L +++ ++ G++ Sbjct: 247 VFGTACSLGLGALQIGAGLSAANIIEDPSDWTIVGIVSVLTLAFIFSAISGVGKGIQYLS 306 Query: 251 TLGVGLIALYSVFLFIRVSSAMGILP-LPG 165 + L AL ++F+F+ V + IL LPG Sbjct: 307 NANMVLAALLAIFVFV-VGPTVSILNLLPG 335
>AMFR1_HUMAN (P26442) Autocrine motility factor receptor precursor, isoform 1| (AMF receptor) Length = 323 Score = 30.8 bits (68), Expect = 2.7 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Frame = +1 Query: 187 IALLTLMKRKTE*RAMRPTPSVLLGRMPLRGSVTSAQTNPATRKLIV*IRERSCGRTYEV 366 I LL+L+ + + RPT GS T Q ++L+V E+ G++ + Sbjct: 216 IKLLSLLWKHVDCARARPT-----------GSCTPEQQGILEKELLVRYLEQRRGKSRAI 264 Query: 367 GAVDQAP-----SSIDIPKPASVLNI------GPA*HPDIAIWTPSPPFIAKATFDIKS 510 G + P S D P S + PA H + A W PSP I+ + D+ S Sbjct: 265 GCDEVTPFCPTTSGTDFPSLQSKAGLISVNSGAPASH-ECAPWVPSPLSISLSRLDLGS 322
>MAL_MOUSE (O09198) Myelin and lymphocyte protein (T-lymphocyte| maturation-associated protein) Length = 153 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -3 Query: 377 STAPTSY-VLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIR 201 ST P+ + V L++ F+ GLVW L+ S + P L G + SVF F+ Sbjct: 10 STLPSGFSVFTTFPDLLFVCEFVFGGLVWILIA---SSLVP-LPLAQGWVMFVSVFCFVA 65 Query: 200 VSSAM 186 +S M Sbjct: 66 TTSLM 70
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +3 Query: 171 ERQYPHSTAYSNEKENRVKSDEANSECLVRPHAAPWQRDKRPDQPSNEEAHRVNKRAVLR 350 +RQ +S ++ ++E K E SE R +DK D+ S EE H+ +RA L Sbjct: 1919 DRQRFYSDSHHLKRERHEKEWEQESE---RHRRRDRSQDKDRDRKSREEGHKDKERARLS 1975 Query: 351 KNVRG 365 RG Sbjct: 1976 HGDRG 1980
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +3 Query: 171 ERQYPHSTAYSNEKENRVKSDEANSECLVRPHAAPWQRDKRPDQPSNEEAHRVNKRAVLR 350 E + T S + ++ + DE + + + W+R+ D PS+ E KR LR Sbjct: 1096 EHEVDVKTPASKPRPDQAREDELHPKQAEKREGRRWRREPTVDSPSHSEGKSNKKRGKLR 1155
>MAL_RAT (Q64349) Myelin and lymphocyte protein (T-lymphocyte| maturation-associated protein) (17 kDa myelin vesicular protein) (MVP17) (NS 3) Length = 153 Score = 29.3 bits (64), Expect = 7.9 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -3 Query: 377 STAPTSY-VLPQDRSLIYTMSFLVAGLVWALVTLPRSGMRPNKTLGVGLIALYSVFLFIR 201 ST P+ + V L++ F+ GLVW L+ S + P L G + SVF F+ Sbjct: 10 STLPSGFSVFVTFPDLLFIFEFIFGGLVWILIA---SSLVP-MPLVQGWVMFVSVFCFLA 65 Query: 200 VSSAM 186 +S M Sbjct: 66 TTSLM 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,776,397 Number of Sequences: 219361 Number of extensions: 1710890 Number of successful extensions: 4831 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4824 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)