ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags14f19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB085212.1| Triticum aestivum Tria27 mRNA for 27K protein, p... 297 2e-77
2dbj|AK071633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 5e-69
3dbj|AK068091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 6e-47
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 2e-37
5gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 165 2e-37
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7dbj|AK106050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
8ref|NM_100582.2| Arabidopsis thaliana catalytic AT1G07080 mRNA, ... 42 2.2
9ref|NM_006030.2| Homo sapiens calcium channel, voltage-dependent... 42 2.2
10ref|NM_001005505.1| Homo sapiens calcium channel, voltage-depend... 42 2.2
11gb|AF443077.1| HIV-1 isolate 98BWMC13.4 from Botswana, complete ... 42 2.2
12gb|AY054145.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, com... 42 2.2
13emb|AJ251368.1|HSA251368 Homo sapiens mRNA for for calcium chann... 42 2.2
14emb|AJ251367.1|HSA251367 Homo sapiens mRNA for for calcium chann... 42 2.2
15gb|AY049308.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, com... 42 2.2
16emb|BX816741.1|CNS0ABK9 Arabidopsis thaliana Full-length cDNA Co... 42 2.2
17gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thali... 42 2.2
18gb|AF040709.1|AF040709 Homo sapiens putative tumor suppressor ge... 42 2.2
19gb|AF042793.1|AF042793 Homo sapiens alpha 2 delta calcium channe... 42 2.2
20gb|AF042792.1|AF042792 Homo sapiens alpha 2 delta calcium channe... 42 2.2
21emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on ch... 42 2.2
22emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chr... 42 2.2
23dbj|AB011130.1| Homo sapiens mRNA for KIAA0558 protein, partial cds 42 2.2
24ref|XM_629861.1| Dictyostelium discoideum hypothetical protein (... 40 8.7
25gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complet... 40 8.7
26ref|XM_322483.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.7
27ref|XM_952191.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.7
28gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosom... 40 8.7
29gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosom... 40 8.7
30emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7... 40 8.7
31gb|AE005759.1| Caulobacter crescentus CB15 section 85 of 359 of ... 40 8.7
32gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, compl... 40 8.7
33gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4... 40 8.7
34gb|U39043.1|PHU39043 Pasteurella haemolytica UDP-galactose 4-epi... 40 8.7
35gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 8.7 
>dbj|AB085212.1| Triticum aestivum Tria27 mRNA for 27K protein, partial cds
          Length = 798

 Score =  297 bits (150), Expect = 2e-77
 Identities = 312/366 (85%)
 Strand = Plus / Plus

                                                                       
Query: 165 caccatcacctgccagcatggccccgatgaatgccttctgaacaacgtggaggcttgcgc 224
           ||||||| |||| |||||||||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 183 caccatctcctgtcagcatggccccgaggaatgccttctcaacaccgtggaggcttgcgc 242

                                                                       
Query: 225 catcgaggcctggccggatttgaatgtgcatttcggtttcatcaactgcgtggaagacct 284
           |||||| |||||||||||  |||| |||||| |||| |||||  ||||||||   |||||
Sbjct: 243 catcgacgcctggccggacgtgaaggtgcatctcggcttcatttactgcgtgtcggacct 302

                                                                       
Query: 285 ggtgatgaaccgcaagcgcgaggaatggcagtcgtgcttccagaaacaggggcttgaccc 344
           |||| ||||   ||||| |  ||| ||| |||||||||||||||||||||||||||||||
Sbjct: 303 ggtgttgaagaacaagcaccgggagtgggagtcgtgcttccagaaacaggggcttgaccc 362

                                                                       
Query: 345 caagcctgtcatggagtgctacaacagtgagcatggccacaagctttcgctcaagtatgg 404
            ||||| |||| ||||||||||||  | |||| ||||||||| || |||||| |||||||
Sbjct: 363 aaagccagtcacggagtgctacaagggcgagcgtggccacaatctatcgctcgagtatgg 422

                                                                       
Query: 405 gaaacagactgatgcacttgtgcctccgcacaagtacgttccatgggtggtggttgatgg 464
           || |||||| | ||  || |||||||| ||| ||| |||||||||||||||||| || ||
Sbjct: 423 gagacagacagctgagctcgtgcctcctcaccagttcgttccatgggtggtggtcgacgg 482

                                                                       
Query: 465 cgagccgctctacgaggattacgagaactttgaagcttacgtctgcaaggcgtacaaggg 524
           | ||||||||||| | ||||||| ||||||  |||||||| |||||||||||||||||||
Sbjct: 483 caagccgctctacaacgattacgggaacttcaaagcttacatctgcaaggcgtacaaggg 542

                 
Query: 525 ccatcc 530
           | ||||
Sbjct: 543 ctatcc 548



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 26 tctactacgagtcgctctgcccctact 52
          |||||||||||||||| ||||||||||
Sbjct: 47 tctactacgagtcgctgtgcccctact 73
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>dbj|AK071633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102J23, full
           insert sequence
          Length = 1076

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                       
Query: 22  gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 81
           ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || |||||||
Sbjct: 226 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 285

                                                                       
Query: 82  gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 141
           |||||||||||   |||| || || |||||||||||||||  |||||||| |||||||||
Sbjct: 286 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 345

                                                                       
Query: 142 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 201
           |||||||||  ||||||||||||||||||| | |||||||||||   ||| || ||| | 
Sbjct: 346 gcccacgtcgtcggcgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 405

                                                                       
Query: 202 ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttgaatgtgcatttcggt 261
           ||||||| ||||||||||||||||||||| || |||||||||||||  ||||||||| ||
Sbjct: 406 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttgagagtgcatttccgt 465

                                                   
Query: 262 ttcatcaactgcgtggaagacctggtgatgaaccgcaagc 301
           |||||| |||||||||| ||||||||| |||||| |||||
Sbjct: 466 ttcatctactgcgtggaggacctggtggtgaaccacaagc 505



 Score =  151 bits (76), Expect = 3e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 343 cccaagcctgtcatggagtgctacaacagtgagcatggccacaagctttcgctcaagtat 402
           |||||||||||||  || ||||||||  | || |  |||||| |||| ||||||||||||
Sbjct: 547 cccaagcctgtcaccgactgctacaagggcgaacgcggccaccagctctcgctcaagtat 606

                                                                       
Query: 403 gggaaacagactgatgcacttgtgcctccgcacaagtacgttccatgggtggtggttgat 462
           || | ||||||||| ||  |   |||||| |||||||||||||| |||||||| || || 
Sbjct: 607 ggaagacagactgacgctttgcagcctccccacaagtacgttccctgggtggtcgtcgac 666

                                                                       
Query: 463 ggcgagccgctctacgaggattacgagaactttgaagcttacgtctgcaaggcgtacaag 522
           ||  |||||||||||||||||||||||||||| || |||||| |||||||||| ||||||
Sbjct: 667 ggtcagccgctctacgaggattacgagaacttcgaggcttacatctgcaaggcctacaag 726

                                               
Query: 523 ggccatcctcccaagatttgccaagggctgggccgt 558
           ||||||||||||||| | ||| | ||||||| ||||
Sbjct: 727 ggccatcctcccaaggtgtgcgaggggctggcccgt 762
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>dbj|AK068091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A15, full
           insert sequence
          Length = 1161

 Score =  196 bits (99), Expect = 6e-47
 Identities = 189/219 (86%)
 Strand = Plus / Plus

                                                                       
Query: 22  gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 81
           ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || |||||||
Sbjct: 231 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 290

                                                                       
Query: 82  gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 141
           |||||||||||   |||| || || |||||||||||||||  |||||||| |||||||||
Sbjct: 291 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 350

                                                                       
Query: 142 gcccacgtccgcggcgccaacaacaccatcacctgccagcatggccccgatgaatgcctt 201
           |||||||||  ||| ||||||||||||||| | |||||||||||   ||| || ||| | 
Sbjct: 351 gcccacgtcgtcggtgccaacaacaccatctcttgccagcatggaagcgaggagtgcttc 410

                                                  
Query: 202 ctgaacaacgtggaggcttgcgccatcgaggcctggccg 240
           ||||||| ||||||||||||||||||||| || ||||||
Sbjct: 411 ctgaacaccgtggaggcttgcgccatcgatgcatggccg 449



 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                       
Query: 426 gcctccgcacaagtacgttccatgggtggtggttgatggcgagccgctctacgaggatta 485
           |||||| |||||||||||||| |||||||| || || ||  | |||||||||||||||||
Sbjct: 742 gcctccccacaagtacgttccttgggtggtcgtcgacggtcatccgctctacgaggatta 801

                                                                       
Query: 486 cgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaagatttgcca 545
           ||||||||| || |||||| |||||||||| ||||||||||||||||||||| | ||| |
Sbjct: 802 cgagaacttcgaggcttacttctgcaaggcctacaagggccatcctcccaaggtgtgcga 861

                        
Query: 546 agggctgggccgt 558
            ||||||| ||||
Sbjct: 862 ggggctggcccgt 874
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                            
Query: 22       gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 81
                ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || |||||||
Sbjct: 10331057 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 10330998

                                                                            
Query: 82       gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 141
                |||||||||||   |||| || || |||||||||||||||  |||||||| |||||||||
Sbjct: 10330997 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 10330938

                                                       
Query: 142      gcccacgtccgcggcgccaacaacaccatcacctgccag 180
                |||||||||  ||||||||||||||||||| | ||||||
Sbjct: 10330937 gcccacgtcgtcggcgccaacaacaccatctcttgccag 10330899



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                            
Query: 479      aggattacgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaaga 538
                |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| 
Sbjct: 10328051 aggattacgagaacttcgaggcttacatctgcaaggcctacaagggccatcctcccaagg 10327992

                                    
Query: 539      tttgccaagggctgggccgt 558
                | ||| | ||||||| ||||
Sbjct: 10327991 tgtgcgaggggctggcccgt 10327972



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 202      ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttg 246
                ||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 10328771 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttg 10328727



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                            
Query: 386      agctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgttc 445
                |||| |||||||||||||| | ||||||||| ||  |   |||||| |||||||||||||
Sbjct: 10328301 agctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaagtacgttc 10328242

                                                    
Query: 446      catgggtggtggttgatggcgagccgctctacgagg 481
                | |||||||| || || ||  |||||||||||||||
Sbjct: 10328241 cctgggtggtcgtcgacggtcagccgctctacgagg 10328206



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 20       tggcgctctactacgagtcgctctgcccctact 52
                |||||||||||||||||||||| ||||||||||
Sbjct: 10329158 tggcgctctactacgagtcgctgtgcccctact 10329126



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 107      acgccgtcgacctcctgctcgtcccctacggcaacgccc 145
                ||||||||||||||   ||||||||||||||||||||||
Sbjct: 10329071 acgccgtcgacctctccctcgtcccctacggcaacgccc 10329033
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                         
Query: 22    gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 81
             ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || |||||||
Sbjct: 44523 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 44464

                                                                         
Query: 82    gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 141
             |||||||||||   |||| || || |||||||||||||||  |||||||| |||||||||
Sbjct: 44463 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 44404

                                                    
Query: 142   gcccacgtccgcggcgccaacaacaccatcacctgccag 180
             |||||||||  ||||||||||||||||||| | ||||||
Sbjct: 44403 gcccacgtcgtcggcgccaacaacaccatctcttgccag 44365



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 479   aggattacgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaaga 538
             |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| 
Sbjct: 41517 aggattacgagaacttcgaggcttacatctgcaaggcctacaagggccatcctcccaagg 41458

                                 
Query: 539   tttgccaagggctgggccgt 558
             | ||| | ||||||| ||||
Sbjct: 41457 tgtgcgaggggctggcccgt 41438



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 202   ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttg 246
             ||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 42237 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttg 42193



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                         
Query: 386   agctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgttc 445
             |||| |||||||||||||| | ||||||||| ||  |   |||||| |||||||||||||
Sbjct: 41767 agctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaagtacgttc 41708

                                                 
Query: 446   catgggtggtggttgatggcgagccgctctacgagg 481
             | |||||||| || || ||  |||||||||||||||
Sbjct: 41707 cctgggtggtcgtcgacggtcagccgctctacgagg 41672



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 20    tggcgctctactacgagtcgctctgcccctact 52
             |||||||||||||||||||||| ||||||||||
Sbjct: 42624 tggcgctctactacgagtcgctgtgcccctact 42592



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 107   acgccgtcgacctcctgctcgtcccctacggcaacgccc 145
             ||||||||||||||   ||||||||||||||||||||||
Sbjct: 42537 acgccgtcgacctctccctcgtcccctacggcaacgccc 42499
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                            
Query: 22       gcgctctactacgagtcgctctgcccctactgctcgcgcttcatcgtcacccgcctcgcc 81
                ||||||||||||||| |||| ||||| ||||||||||| |||||||||| || |||||||
Sbjct: 10329158 gcgctctactacgagacgctgtgcccgtactgctcgcggttcatcgtcaaccacctcgcc 10329099

                                                                            
Query: 82       gggatcttcgacagcgggctcatccacgccgtcgacctcctgctcgtcccctacggcaac 141
                |||||||||||   |||| || || |||||||||||||||  |||||||| |||||||||
Sbjct: 10329098 gggatcttcgaggacgggatcgtcgacgccgtcgacctccgcctcgtcccatacggcaac 10329039

                                                       
Query: 142      gcccacgtccgcggcgccaacaacaccatcacctgccag 180
                |||||||||  ||||||||||||||||||| | ||||||
Sbjct: 10329038 gcccacgtcgtcggcgccaacaacaccatctcttgccag 10329000



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                            
Query: 479      aggattacgagaactttgaagcttacgtctgcaaggcgtacaagggccatcctcccaaga 538
                |||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| 
Sbjct: 10326152 aggattacgagaacttcgaggcttacatctgcaaggcctacaagggccatcctcccaagg 10326093

                                    
Query: 539      tttgccaagggctgggccgt 558
                | ||| | ||||||| ||||
Sbjct: 10326092 tgtgcgaggggctggcccgt 10326073



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                             
Query: 202      ctgaacaacgtggaggcttgcgccatcgaggcctggccggatttg 246
                ||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 10326872 ctgaacaccgtggaggcttgcgccatcgatgcatggccggatttg 10326828



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                            
Query: 386      agctttcgctcaagtatgggaaacagactgatgcacttgtgcctccgcacaagtacgttc 445
                |||| |||||||||||||| | ||||||||| ||  |   |||||| |||||||||||||
Sbjct: 10326402 agctctcgctcaagtatggaagacagactgacgctttgcagcctccccacaagtacgttc 10326343

                                                    
Query: 446      catgggtggtggttgatggcgagccgctctacgagg 481
                | |||||||| || || ||  |||||||||||||||
Sbjct: 10326342 cctgggtggtcgtcgacggtcagccgctctacgagg 10326307



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 20       tggcgctctactacgagtcgctctgcccctact 52
                |||||||||||||||||||||| ||||||||||
Sbjct: 10327259 tggcgctctactacgagtcgctgtgcccctact 10327227



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 107      acgccgtcgacctcctgctcgtcccctacggcaacgccc 145
                ||||||||||||||   ||||||||||||||||||||||
Sbjct: 10327172 acgccgtcgacctctccctcgtcccctacggcaacgccc 10327134
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>dbj|AK106050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F01, full
           insert sequence
          Length = 942

 Score =  151 bits (76), Expect = 3e-33
 Identities = 181/216 (83%)
 Strand = Plus / Plus

                                                                       
Query: 343 cccaagcctgtcatggagtgctacaacagtgagcatggccacaagctttcgctcaagtat 402
           |||||||||||||  || ||||||||  | || |  |||||| |||| ||||||||||||
Sbjct: 466 cccaagcctgtcaccgactgctacaagggcgaacgcggccaccagctctcgctcaagtat 525

                                                                       
Query: 403 gggaaacagactgatgcacttgtgcctccgcacaagtacgttccatgggtggtggttgat 462
           || | ||||||||| ||  |   |||||| |||||||||||||| |||||||| || || 
Sbjct: 526 ggaagacagactgacgctttgcagcctccccacaagtacgttccctgggtggtcgtcgac 585

                                                                       
Query: 463 ggcgagccgctctacgaggattacgagaactttgaagcttacgtctgcaaggcgtacaag 522
           ||  |||||||||||||||||||||||||||| || |||||| |||||||||| ||||||
Sbjct: 586 ggtcagccgctctacgaggattacgagaacttcgaggcttacatctgcaaggcctacaag 645

                                               
Query: 523 ggccatcctcccaagatttgccaagggctgggccgt 558
           ||||||||||||||| | ||| | ||||||| ||||
Sbjct: 646 ggccatcctcccaaggtgtgcgaggggctggcccgt 681



 Score =  121 bits (61), Expect = 3e-24
 Identities = 112/129 (86%)
 Strand = Plus / Plus

                                                                       
Query: 173 cctgccagcatggccccgatgaatgccttctgaacaacgtggaggcttgcgccatcgagg 232
           |||||||||||||   ||| || ||| | ||||||| ||||||||||||||||||||| |
Sbjct: 296 cctgccagcatggaagcgaggagtgcttcctgaacaccgtggaggcttgcgccatcgatg 355

                                                                       
Query: 233 cctggccggatttgaatgtgcatttcggtttcatcaactgcgtggaagacctggtgatga 292
           | |||||||||||||  ||||||||| |||||||| |||||||||| ||||||||| |||
Sbjct: 356 catggccggatttgagagtgcatttccgtttcatctactgcgtggaggacctggtggtga 415

                    
Query: 293 accgcaagc 301
           ||| |||||
Sbjct: 416 accacaagc 424



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 20  tggcgctctactacgagtcgctctgcccctact 52
           |||||||||||||||||||||| ||||||||||
Sbjct: 149 tggcgctctactacgagtcgctgtgcccctact 181



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 107 acgccgtcgacctcctgctcgtcccctacggcaacgccc 145
           ||||||||||||||   ||||||||||||||||||||||
Sbjct: 236 acgccgtcgacctctccctcgtcccctacggcaacgccc 274
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>ref|NM_100582.2| Arabidopsis thaliana catalytic AT1G07080 mRNA, complete cds
          Length = 1190

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 28  tactacgagtcgctctgcccctactgctc 56
           ||||||||||| ||||| |||||||||||
Sbjct: 189 tactacgagtctctctgtccctactgctc 217
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>ref|NM_006030.2| Homo sapiens calcium channel, voltage-dependent, alpha 2/delta
           subunit 2 (CACNA2D2), transcript variant 2, mRNA
          Length = 5337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 290 cacgccgtcgacctcctgctc 270
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>ref|NM_001005505.1| Homo sapiens calcium channel, voltage-dependent, alpha 2/delta
           subunit 2 (CACNA2D2), transcript variant 1, mRNA
          Length = 5343

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 290 cacgccgtcgacctcctgctc 270
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>gb|AF443077.1| HIV-1 isolate 98BWMC13.4 from Botswana, complete genome
          Length = 9079

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  tccagaaacaggggcttgacc 343
            |||||||||||||||||||||
Sbjct: 2881 tccagaaacaggggcttgacc 2901
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>gb|AY054145.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, complete cds
          Length = 798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 28  tactacgagtcgctctgcccctactgctc 56
           ||||||||||| ||||| |||||||||||
Sbjct: 130 tactacgagtctctctgtccctactgctc 158
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>emb|AJ251368.1|HSA251368 Homo sapiens mRNA for for calcium channel, alpha 2/delta subunit 2
           (CACNA2D2 gene), splice variant alpha2delta-2b
          Length = 3453

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 252 cacgccgtcgacctcctgctc 232
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>emb|AJ251367.1|HSA251367 Homo sapiens mRNA for for calcium channel, alpha 2/delta subunit 2
           (CACNA2D2 gene), splice variant alpha2delta-2a
          Length = 3432

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 252 cacgccgtcgacctcctgctc 232
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>gb|AY049308.1| Arabidopsis thaliana At1g07080/F10K1_15 mRNA, complete cds
          Length = 1100

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 28  tactacgagtcgctctgcccctactgctc 56
           ||||||||||| ||||| |||||||||||
Sbjct: 159 tactacgagtctctctgtccctactgctc 187
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>emb|BX816741.1|CNS0ABK9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZE05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 956

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 28  tactacgagtcgctctgcccctactgctc 56
           ||||||||||| ||||| |||||||||||
Sbjct: 134 tactacgagtctctctgtccctactgctc 162
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>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 111464

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 28    tactacgagtcgctctgcccctactgctc 56
             ||||||||||| ||||| |||||||||||
Sbjct: 71362 tactacgagtctctctgtccctactgctc 71334
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>gb|AF040709.1|AF040709 Homo sapiens putative tumor suppressor gene 26 protein alpha 2
           delta calcium channel subunit mRNA, complete cds
          Length = 5482

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 432 cacgccgtcgacctcctgctc 412
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>gb|AF042793.1|AF042793 Homo sapiens alpha 2 delta calcium channel subunit isoform II mRNA,
           complete cds
          Length = 5279

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 229 cacgccgtcgacctcctgctc 209
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>gb|AF042792.1|AF042792 Homo sapiens alpha 2 delta calcium channel subunit isoform I mRNA,
           complete cds
          Length = 5463

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 413 cacgccgtcgacctcctgctc 393
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>emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on chromosome 3, complete
             sequence
          Length = 16950

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   cacgccgtcgacctcctgctc 126
             |||||||||||||||||||||
Sbjct: 15113 cacgccgtcgacctcctgctc 15093
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>emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chromosome 4, complete
             sequence
          Length = 199130

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 374   agcatggccacaagctttcgctcaa 398
             |||||||||||||||||| ||||||
Sbjct: 26315 agcatggccacaagctttagctcaa 26339
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>dbj|AB011130.1| Homo sapiens mRNA for KIAA0558 protein, partial cds
          Length = 5303

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 106 cacgccgtcgacctcctgctc 126
           |||||||||||||||||||||
Sbjct: 253 cacgccgtcgacctcctgctc 233
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>ref|XM_629861.1| Dictyostelium discoideum hypothetical protein (DDB0184259), partial
           mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 gcgccaacaacaccatcacc 174
           ||||||||||||||||||||
Sbjct: 421 gcgccaacaacaccatcacc 440
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>gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complete sequence
          Length = 144170

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    gtcacccgcctcgccgggatcttc 90
             ||||||||||||||||| ||||||
Sbjct: 68749 gtcacccgcctcgccggcatcttc 68726
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>ref|XM_322483.1| Neurospora crassa OR74A predicted protein (NCU00398.1) partial
          mRNA
          Length = 2028

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 cgcgcttcatcgtcacccgc 75
          ||||||||||||||||||||
Sbjct: 8  cgcgcttcatcgtcacccgc 27
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>ref|XM_952191.1| Neurospora crassa OR74A hypothetical protein (NCU00398.1) partial
          mRNA
          Length = 2028

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 cgcgcttcatcgtcacccgc 75
          ||||||||||||||||||||
Sbjct: 8  cgcgcttcatcgtcacccgc 27
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>gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosome 7, complete sequence
          Length = 217760

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    caagcctgtcatggagtgct 364
              ||||||||||||||||||||
Sbjct: 199789 caagcctgtcatggagtgct 199808
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>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence
          Length = 185617

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    caagcctgtcatggagtgct 364
              ||||||||||||||||||||
Sbjct: 169255 caagcctgtcatggagtgct 169236
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>emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7H11orf14 gene, D7H11orf15
            gene, D7H11orf16 gene and C11orf17 gene
          Length = 234169

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  caagcctgtcatggagtgct 364
            ||||||||||||||||||||
Sbjct: 9866 caagcctgtcatggagtgct 9847
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>gb|AE005759.1| Caulobacter crescentus CB15 section 85 of 359 of the complete genome
          Length = 12748

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   tctgcccctactgctcgcgc 60
            ||||||||||||||||||||
Sbjct: 9612 tctgcccctactgctcgcgc 9593
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>gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, complete sequence
          Length = 143200

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caccatcacctgccagcatg 184
            ||||||||||||||||||||
Sbjct: 3037 caccatcacctgccagcatg 3018
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>gb|AC027316.3|AC027316 Homo sapiens chromosome 5 clone CTC-304C4, complete sequence
          Length = 112361

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   caccatcacctgccagcatg 184
             ||||||||||||||||||||
Sbjct: 45857 caccatcacctgccagcatg 45838
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>gb|U39043.1|PHU39043 Pasteurella haemolytica UDP-galactose 4-epimerase (galE) gene,
            complete cds
          Length = 3269

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 447  atgggtggtggttgatggcg 466
            ||||||||||||||||||||
Sbjct: 1397 atgggtggtggttgatggcg 1416
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>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH138P04, complete sequence
          Length = 137697

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 437   agtacgttccatgggtggtggttgatgg 464
             |||||||||| ||||| |||||||||||
Sbjct: 19390 agtacgttccttgggtagtggttgatgg 19417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,923,390
Number of Sequences: 3902068
Number of extensions: 3923390
Number of successful extensions: 65851
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65724
Number of HSP's gapped (non-prelim): 119
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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