ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14f03 |
|---|---|
| Clone Library Name | barley_pub |
>RS6B_ARATH (P51430) 40S ribosomal protein S6-2| Length = 249 Score = 227 bits (578), Expect(2) = 5e-64 Identities = 113/147 (76%), Positives = 121/147 (82%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + +GGCDKQGFPMKQGVLT GRVRLLLHRGTPCF CIVS Sbjct: 46 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVS 105 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DLSV+NLVIVKKG +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR YVNTYRRT Sbjct: 106 PDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRT 165 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 F NKKGKKVSKAPKIQRLVTPLTLQR+ Sbjct: 166 FTNKKGKKVSKAPKIQRLVTPLTLQRK 192 Score = 37.4 bits (85), Expect(2) = 5e-64 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 499 SEAAEYQKLLAQRLKEQRDR 558 S+AA+YQKLLA RLKEQRDR Sbjct: 208 SDAADYQKLLASRLKEQRDR 227
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6| Length = 251 Score = 223 bits (567), Expect(2) = 2e-63 Identities = 111/147 (75%), Positives = 118/147 (80%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + +GGCDKQGFPMKQGVLT GRVRLLLHRGTPCF CIVS Sbjct: 46 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DLSV+NLVIVKKGENDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR YVNTYRRT Sbjct: 106 PDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRT 165 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 F NKKGK SKAPKIQRLVTPLTLQR+ Sbjct: 166 FTNKKGKTCSKAPKIQRLVTPLTLQRK 192 Score = 39.7 bits (91), Expect(2) = 2e-63 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = +1 Query: 499 SEAAEYQKLLAQRLKEQRDR 558 SEAAEYQKLLA RLKEQRDR Sbjct: 208 SEAAEYQKLLASRLKEQRDR 227
>RS6A_ARATH (O48549) 40S ribosomal protein S6-1| Length = 250 Score = 223 bits (569), Expect(2) = 5e-63 Identities = 112/147 (76%), Positives = 120/147 (81%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GGCDKQGFPMKQGVLT GRVRLLLHRGTPCF CIVS Sbjct: 46 KGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVS 105 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DLSV+NLVIVKKGENDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYRR Sbjct: 106 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRK 165 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 F NKKGK+VSKAPKIQRLVTPLTLQR+ Sbjct: 166 FTNKKGKEVSKAPKIQRLVTPLTLQRK 192 Score = 37.4 bits (85), Expect(2) = 5e-63 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 499 SEAAEYQKLLAQRLKEQRDR 558 S+AA+YQKLLA RLKEQRDR Sbjct: 208 SDAADYQKLLASRLKEQRDR 227
>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)| Length = 199 Score = 173 bits (438), Expect(2) = 9e-48 Identities = 93/147 (63%), Positives = 104/147 (70%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + +GGCDKQGFPMKQGVLT GRVRLLL+RGTPCF CIVS Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DLSV+NLVIVKKGENDLPGLTDTEKPRMRGP+ + + L+ K+DDVR YVNT Sbjct: 61 PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNTTAEF 118 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 KG SKAPKIQRLVTPLTLQR+ Sbjct: 119 TTKWKG---SKAPKIQRLVTPLTLQRK 142 Score = 37.0 bits (84), Expect(2) = 9e-48 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 499 SEAAEYQKLLAQRLKEQRDR 558 SEAAEYQKLLA RLKEQR++ Sbjct: 158 SEAAEYQKLLASRLKEQREK 177
>RS6_RAT (P62755) 40S ribosomal protein S6| Length = 249 Score = 154 bits (389), Expect(2) = 3e-40 Identities = 88/148 (59%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVIVKKGE D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRK 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 LNK+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLNKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 30.4 bits (67), Expect(2) = 3e-40 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EAAEY KLLA+R+KE +++ Q Sbjct: 205 EAAEYAKLLAKRMKEAKEKRQ 225
>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 154 bits (389), Expect(2) = 3e-40 Identities = 88/148 (59%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVIVKKGE D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRK 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 LNK+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLNKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 30.4 bits (67), Expect(2) = 3e-40 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EAAEY KLLA+R+KE +++ Q Sbjct: 205 EAAEYAKLLAKRMKEAKEKRQ 225
>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)| Length = 249 Score = 154 bits (389), Expect(2) = 3e-40 Identities = 88/148 (59%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVIVKKGE D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRK 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 LNK+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLNKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 30.4 bits (67), Expect(2) = 3e-40 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EAAEY KLLA+R+KE +++ Q Sbjct: 205 EAAEYAKLLAKRMKEAKEKRQ 225
>RS6_CHICK (P47838) 40S ribosomal protein S6| Length = 249 Score = 154 bits (389), Expect(2) = 7e-40 Identities = 88/148 (59%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVIVKKGE D+PGLTDT PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRK 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 LNK+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLNKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 29.3 bits (64), Expect(2) = 7e-40 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EAA+Y KLLA+R+KE +++ Q Sbjct: 205 EAADYAKLLAKRMKEAKEKRQ 225
>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6| Length = 249 Score = 149 bits (377), Expect(2) = 5e-39 Identities = 84/148 (56%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT+GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTNGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVI++KGE D+PGLTD+ PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRR 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 L K+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLTKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 31.2 bits (69), Expect(2) = 5e-39 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EAAEY KLLA+RLKE +++ Q Sbjct: 205 EAAEYAKLLAKRLKEAKEKRQ 225
>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6| Length = 247 Score = 149 bits (375), Expect(2) = 5e-38 Identities = 84/148 (56%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT+ RVRLLL + C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTATRVRLLLDKNHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV++LVI+KKGE D+PGLTD PR GPKRASKI+KLFNL K+DDVR YV RR Sbjct: 104 SNLSVLSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRP 161 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 + GKK SKAPKIQRLVTP+ LQR+ Sbjct: 162 LPERDGKKAKSKAPKIQRLVTPVVLQRK 189 Score = 28.5 bits (62), Expect(2) = 5e-38 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +1 Query: 508 AEYQKLLAQRLKEQRDR 558 AEY KLLAQR+KE ++R Sbjct: 208 AEYTKLLAQRMKEAKER 224
>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6| Length = 249 Score = 147 bits (370), Expect(2) = 1e-37 Identities = 84/148 (56%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CI Sbjct: 46 KGYMVRISGGNDKQGFPMKQGVLTHGRVRLLLAKGHSCYRPRRTGERKRKSVRG--CIGD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVI+KKGE D+PGLTD+ PR GPKRASKI+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV---VRR 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 L K+GKK +KAP+IQRLVTP LQ + Sbjct: 161 PLTKEGKKPRTKAPRIQRLVTPRVLQHK 188 Score = 29.3 bits (64), Expect(2) = 1e-37 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EA+EY KLLA+R+KE +++ Q Sbjct: 205 EASEYAKLLAKRMKEAKEKRQ 225
>RS6_XENLA (P39017) 40S ribosomal protein S6| Length = 249 Score = 148 bits (373), Expect(2) = 1e-37 Identities = 85/148 (57%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVIV+KGE D+PGLTD PR GPKRAS+I+KLFNL K+DDVR YV R Sbjct: 104 ANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRK 160 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 L K+GKK +KAPKIQRLVTP LQ + Sbjct: 161 PLAKEGKKPRTKAPKIQRLVTPRVLQHK 188 Score = 27.7 bits (60), Expect(2) = 1e-37 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRDRPQ 564 EA+EY KLLA+R KE +++ Q Sbjct: 205 EASEYAKLLAKRSKEAKEKRQ 225
>RS6_BRAFL (O01727) 40S ribosomal protein S6| Length = 244 Score = 150 bits (380), Expect(2) = 1e-37 Identities = 84/148 (56%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG DKQGFPMKQGVLT+GRVRLLL +G C+ CIV Sbjct: 46 KGYLVRISGGNDKQGFPMKQGVLTNGRVRLLLGKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+NLVI+KKGE D+PGLTDT PR GPKRA +I+KLFNL K+DDVR YV RR Sbjct: 104 SNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VRRP 161 Query: 372 FLNKKGKKVS-KAPKIQRLVTPLTLQRE 452 K+GKK K PKIQRL+TP LQR+ Sbjct: 162 LPQKEGKKQKFKTPKIQRLITPQRLQRK 189 Score = 25.0 bits (53), Expect(2) = 1e-37 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRD 555 E A Y KLLA+R KE+R+ Sbjct: 206 EEATYAKLLAKRKKEERE 223
>RS6_DROME (P29327) 40S ribosomal protein S6| Length = 248 Score = 148 bits (374), Expect(2) = 5e-36 Identities = 83/148 (56%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G L+ GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV Sbjct: 46 KGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 ++SV+ LV++KKGE D+PGLTDT PR GPKRASKI+KL+NL K+DDVR +V RR Sbjct: 104 ANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRP 161 Query: 372 FLNKKGKK-VSKAPKIQRLVTPLTLQRE 452 K KK SKAPKIQRL+TP+ LQR+ Sbjct: 162 LPAKDNKKATSKAPKIQRLITPVVLQRK 189 Score = 22.3 bits (46), Expect(2) = 5e-36 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 +A+Y KLL QR KE + Sbjct: 207 SADYAKLLVQRKKESK 222
>RS6_SPOFR (Q95V32) 40S ribosomal protein S6| Length = 253 Score = 143 bits (360), Expect(2) = 5e-35 Identities = 82/150 (54%), Positives = 100/150 (66%), Gaps = 4/150 (2%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G L+ GG DKQGFPMKQGVLT+ RVRLL+ +G C+ CIV Sbjct: 46 KGYVLRIAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+ LVIV+KGE ++PGLTD PR GPKRASKI+KLFNL K+DDVR YV +R Sbjct: 104 ANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRL 161 Query: 372 FLNKKGKKVS----KAPKIQRLVTPLTLQR 449 K+GK+ + KAPKIQRLVTP+ LQR Sbjct: 162 LPAKEGKENAKPRYKAPKIQRLVTPVVLQR 191 Score = 24.3 bits (51), Expect(2) = 5e-35 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 511 EYQKLLAQRLKEQRDRPQ*E 570 +Y KLLAQR KE + R Q E Sbjct: 212 DYAKLLAQRKKESKVRRQEE 231
>RS6_MANSE (Q94624) 40S ribosomal protein S6| Length = 253 Score = 140 bits (354), Expect(2) = 5e-35 Identities = 81/150 (54%), Positives = 99/150 (66%), Gaps = 4/150 (2%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G L+ GG DKQGFPMKQGVLT+ RVRLL+ +G C+ CIV Sbjct: 46 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +LSV+ LVIV+KGE ++PGLTD PR GPKRASKI+KLFNL K+DDVR YV + Sbjct: 104 ANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKAL 161 Query: 372 FLNKKGKKVS----KAPKIQRLVTPLTLQR 449 K+GK+ + KAPKIQRLVTP+ LQR Sbjct: 162 LPAKEGKENAKPRYKAPKIQRLVTPVVLQR 191 Score = 26.6 bits (57), Expect(2) = 5e-35 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 499 SEAAEYQKLLAQRLKEQRDRPQ*E 570 S A+Y KLLAQR KE + R Q E Sbjct: 208 SAEADYAKLLAQRKKESKVRRQEE 231
>RS6_AEDAE (Q9U761) 40S ribosomal protein S6| Length = 346 Score = 145 bits (367), Expect = 6e-35 Identities = 80/148 (54%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVLT+ RVRLLL +G C+ CIV Sbjct: 46 KGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 Q+LS + L++VKKGE D+PGLTDT PR GPKRAS I+KL+NL K+DDVR +V +R Sbjct: 104 QNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRP 161 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 K GKK +KAPKIQRL+TP+ LQR+ Sbjct: 162 LPEKDGKKARTKAPKIQRLITPVVLQRK 189
>RS6_AEDAL (Q9U762) 40S ribosomal protein S6| Length = 349 Score = 142 bits (359), Expect = 5e-34 Identities = 80/148 (54%), Positives = 98/148 (66%), Gaps = 1/148 (0%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVLT+ RVRLLL +G C+ CIV Sbjct: 46 KGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVD 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 Q+LS + L++VKKGE D+PGLTDT R GPKRAS I+KL+NL K+DDVR YV +R Sbjct: 104 QNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRP 161 Query: 372 FLNKKGKKV-SKAPKIQRLVTPLTLQRE 452 K GKK +KAPKIQRL+TP+ LQR+ Sbjct: 162 LPEKDGKKPRTKAPKIQRLITPVVLQRK 189
>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B| Length = 239 Score = 137 bits (346), Expect = 2e-32 Identities = 79/147 (53%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Frame = +3 Query: 15 GLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQ 194 G + GG DKQGFPM QGVL RVRLLL G PC+ CIV Q Sbjct: 47 GYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQ 104 Query: 195 DLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTF 374 DL+V+ L IVK+GE D+PGLTD P+ GPKRASKI++ FNL K+DDVR +V R Sbjct: 105 DLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVV 163 Query: 375 LNKKGKK-VSKAPKIQRLVTPLTLQRE 452 K+GKK +KAPKIQRLVTP TLQ + Sbjct: 164 PKKEGKKPYTKAPKIQRLVTPRTLQHK 190
>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6| Length = 246 Score = 135 bits (340), Expect(2) = 2e-32 Identities = 73/139 (52%), Positives = 93/139 (66%) Frame = +3 Query: 36 GGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINL 215 GG DKQGFPMKQG+LT+GRVRLLL +G C+ CIV ++S ++L Sbjct: 54 GGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRG--CIVDANMSALSL 111 Query: 216 VIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK 395 VIVKKG+ ++ GLTD+ PR GPKRASKI+KLFNL K DDV YV T+ +TF + K Sbjct: 112 VIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKT 171 Query: 396 VSKAPKIQRLVTPLTLQRE 452 + APKIQRL+TP + R+ Sbjct: 172 I--APKIQRLITPARIARK 188 Score = 23.1 bits (48), Expect(2) = 2e-32 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 502 EAAEYQKLLAQRLKEQRD 555 +AA Y KLLA+ KE+ D Sbjct: 205 DAAAYHKLLAKYSKEEHD 222
>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A| Length = 239 Score = 137 bits (345), Expect = 2e-32 Identities = 78/147 (53%), Positives = 93/147 (63%), Gaps = 1/147 (0%) Frame = +3 Query: 15 GLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQ 194 G + GG DKQGFPM QGVL RVRLLL G PC+ CIV Q Sbjct: 47 GYVFKITGGNDKQGFPMFQGVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQ 104 Query: 195 DLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTF 374 DL+V+ L I+K+GE D+PGLTD P+ GPKRASKI++ FNL K+DDVR +V R Sbjct: 105 DLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVV 163 Query: 375 LNKKGKK-VSKAPKIQRLVTPLTLQRE 452 K+GKK +KAPKIQRLVTP TLQ + Sbjct: 164 PKKEGKKPYTKAPKIQRLVTPRTLQHK 190
>RS6_YARLI (Q6C169) 40S ribosomal protein S6| Length = 242 Score = 133 bits (335), Expect(2) = 1e-31 Identities = 75/148 (50%), Positives = 93/148 (62%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G L+ GG DKQGFPMKQGV+ RVRLLL + + C+ CIVS Sbjct: 46 KGYVLKITGGNDKQGFPMKQGVMHPTRVRLLLSKDSSCYRSRRAGERKRKSVRG--CIVS 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DLSV+++VIVK+G+ D+ GLT PR GPKRA+ I+KLF L K+DDVR YV RR Sbjct: 104 SDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRRE 161 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQREA 455 K GK +KAPKIQRL+TP L +A Sbjct: 162 VTTKSGKTYTKAPKIQRLITPRRLAHKA 189 Score = 22.3 bits (46), Expect(2) = 1e-31 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+R+ E++ Sbjct: 206 AAEYAQLLAKRVAEKK 221
>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6| Length = 236 Score = 130 bits (328), Expect(2) = 1e-31 Identities = 74/147 (50%), Positives = 96/147 (65%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGV+ RV+LLL +G C+ CIV+ Sbjct: 46 KGYIFRITGGNDKQGFPMKQGVMHPTRVKLLLAKGHSCYRPRRTGERKRKSVRG--CIVA 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 QDL+V+ L +VK+G++D+ GLTDT P+ GPKRA+ I+K F L K+DDVR +V RR Sbjct: 104 QDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV--VRRE 161 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K KK +KAPKIQRLVTP TLQR+ Sbjct: 162 VV-KGDKKYTKAPKIQRLVTPQTLQRK 187 Score = 25.0 bits (53), Expect(2) = 1e-31 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLAQRL E++ Sbjct: 205 AAEYAQLLAQRLHERK 220
>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)| Length = 236 Score = 123 bits (309), Expect(2) = 5e-29 Identities = 72/147 (48%), Positives = 89/147 (60%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVL R++LLL + C+ IV Sbjct: 46 KGYVFKISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGA--IVG 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DL+V+ LVIVKKGE +L GLTDT P+ GPKRA+ I+K F L K+DDVR +V R Sbjct: 104 PDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRR 160 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K K +KAPKIQRLVTP LQR+ Sbjct: 161 EVTKGEKTYTKAPKIQRLVTPQRLQRK 187 Score = 23.9 bits (50), Expect(2) = 5e-29 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+RL E++ Sbjct: 205 AAEYAQLLAKRLSERK 220
>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6| Length = 236 Score = 122 bits (307), Expect(2) = 1e-28 Identities = 72/147 (48%), Positives = 90/147 (61%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVL RV+LLL +G C+ IV Sbjct: 46 KGYTFKITGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCYRPRRSGERKRKSVRGA--IVG 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DL+V++LVIVKKGE +L G+TD P+ GPKRA+ I+K F L K+DDVR +V R Sbjct: 104 PDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRR 160 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K K +KAPKIQRLVTP LQR+ Sbjct: 161 EVTKGEKTYTKAPKIQRLVTPQRLQRK 187 Score = 23.5 bits (49), Expect(2) = 1e-28 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+RL E++ Sbjct: 205 AAEYAQLLAKRLAERK 220
>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)| Length = 235 Score = 121 bits (303), Expect(2) = 3e-28 Identities = 70/147 (47%), Positives = 90/147 (61%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVL RV+LL+ +GT C+ IV Sbjct: 46 KGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRGA--IVG 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DL+V+ LVIVKKG+ ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV R Sbjct: 104 PDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRR 160 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K K +KAPKIQRLVTP LQR+ Sbjct: 161 EVTKGEKTYTKAPKIQRLVTPQRLQRK 187 Score = 23.5 bits (49), Expect(2) = 3e-28 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+RL E++ Sbjct: 205 AAEYAQLLAKRLAERK 220
>RS6_KLULA (Q6CM04) 40S ribosomal protein S6| Length = 236 Score = 119 bits (299), Expect(2) = 6e-28 Identities = 69/147 (46%), Positives = 88/147 (59%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVL RV+LLL +G C+ IV Sbjct: 46 KGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCYRPRRNGERKRKSVRGA--IVG 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DL+V+ L+I KKGE ++ G+T+ P+ GPKRA+ I+K F L K+DDVR YV R Sbjct: 104 PDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRR 160 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K K +KAPKIQRLVTP LQR+ Sbjct: 161 EVTKGDKSYTKAPKIQRLVTPQRLQRK 187 Score = 23.9 bits (50), Expect(2) = 6e-28 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+RL E++ Sbjct: 205 AAEYAQLLAKRLSERK 220
>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6| Length = 236 Score = 119 bits (299), Expect(2) = 8e-28 Identities = 69/147 (46%), Positives = 90/147 (61%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G + GG DKQGFPMKQGVL RV+LL+ +GT C+ IV Sbjct: 46 KGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRGA--IVG 103 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 DL+V+ L+I KKG+ ++ G+T+ P+ GPKRA+ I+K F L KDDDVR +V RR Sbjct: 104 PDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV--IRRE 161 Query: 372 FLNKKGKKVSKAPKIQRLVTPLTLQRE 452 + K K +KAPKIQRLVTP LQR+ Sbjct: 162 VV-KGDKTYTKAPKIQRLVTPQRLQRK 187 Score = 23.5 bits (49), Expect(2) = 8e-28 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +1 Query: 505 AAEYQKLLAQRLKEQR 552 AAEY +LLA+RL E++ Sbjct: 205 AAEYAQLLAKRLTEKK 220
>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6| Length = 249 Score = 117 bits (293), Expect(2) = 4e-27 Identities = 64/140 (45%), Positives = 81/140 (57%) Frame = +3 Query: 36 GGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINL 215 GG DK GFPM GVL S RV LL+ RG F C+++ D++++N+ Sbjct: 55 GGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNV 114 Query: 216 VIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK 395 I K G+ + G+TDT PR GPKRASKI+KLFNL + +DVR YV RR + K Sbjct: 115 TISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSGKKD 172 Query: 396 VSKAPKIQRLVTPLTLQREA 455 KAPKIQRL+TP R A Sbjct: 173 RLKAPKIQRLITPRVKARRA 192 Score = 23.5 bits (49), Expect(2) = 4e-27 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 1 GEEFKGYIFKI 33 G EFKGYIF++ Sbjct: 43 GSEFKGYIFRL 53
>RS6_LEIIN (O44012) 40S ribosomal protein S6| Length = 249 Score = 117 bits (293), Expect(2) = 4e-27 Identities = 64/140 (45%), Positives = 81/140 (57%) Frame = +3 Query: 36 GGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINL 215 GG DK GFPM GVL S RV LL+ RG F C+++ D++++N+ Sbjct: 55 GGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNV 114 Query: 216 VIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGKK 395 I K G+ + G+TDT PR GPKRASKI+KLFNL + +DVR YV RR + K Sbjct: 115 TISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VRRRVVKSGKKD 172 Query: 396 VSKAPKIQRLVTPLTLQREA 455 KAPKIQRL+TP R A Sbjct: 173 RLKAPKIQRLITPRVKARRA 192 Score = 23.5 bits (49), Expect(2) = 4e-27 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 1 GEEFKGYIFKI 33 G EFKGYIF++ Sbjct: 43 GSEFKGYIFRL 53
>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6| Length = 203 Score = 67.4 bits (163), Expect = 3e-11 Identities = 44/136 (32%), Positives = 69/136 (50%) Frame = +3 Query: 12 QGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 191 +G ++ GG D QGFPM G LT RVR LL +G + IVS Sbjct: 31 EGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGS--IVS 88 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRT 371 +++ V+NL+I++ GE ++ GLT+ P++ K++K+F G D+ ++ V Y R Sbjct: 89 EEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMF--GVPDEEKNVVG-YIRN 145 Query: 372 FLNKKGKKVSKAPKIQ 419 L + K PKI+ Sbjct: 146 ILKSECDDPKKIPKIR 161
>RS6E_METTH (O26360) 30S ribosomal protein S6e| Length = 126 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/88 (30%), Positives = 40/88 (45%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCI 185 G+ G L+ GG DK GFPMK+ V + R+R L+ G Sbjct: 41 GLSGYKLKITGGSDKNGFPMKKTVPGARRIRSLVSGGV---GYKPRRDGERRRKTFRGNT 97 Query: 186 VSQDLSVINLVIVKKGENDLPGLTDTEK 269 +S D+ IN V+++KGE L L ++ Sbjct: 98 ISDDIVQINTVVIEKGEKPLEELLGADE 125
>RS6E_METJA (P54067) 30S ribosomal protein S6e| Length = 131 Score = 39.7 bits (91), Expect = 0.006 Identities = 27/87 (31%), Positives = 40/87 (45%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCI 185 G++G LQ GG D GFPM+ + S +VR+LL P F Sbjct: 41 GLEGYKLQIRGGTDSSGFPMRPDIHGSRKVRVLL-SAPPGFKPKRKGERRRKTVRGNT-- 97 Query: 186 VSQDLSVINLVIVKKGENDLPGLTDTE 266 ++ D+ IN+ +V+ GE +P L E Sbjct: 98 IAPDIVQINVKVVEYGEKSIPELLGLE 124
>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e| Length = 130 Score = 39.7 bits (91), Expect = 0.006 Identities = 28/83 (33%), Positives = 39/83 (46%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCI 185 G+ G L+ GG DK GFPM+ + RVRLLL G P F Sbjct: 44 GLPGYKLKITGGTDKDGFPMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT-- 100 Query: 186 VSQDLSVINLVIVKKGENDLPGL 254 +S+D+ +N VIV+ G+ + L Sbjct: 101 ISEDIVQVNTVIVEYGDKPVEEL 123
>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e| Length = 125 Score = 33.1 bits (74), Expect = 0.59 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +3 Query: 24 LQDLGGCDKQGFPMKQGVLTSGRVRLLLHRG 116 L+ GG DK GFPM+ V RV++LL RG Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
>RS6E_ARCFU (O29739) 30S ribosomal protein S6e| Length = 129 Score = 33.1 bits (74), Expect = 0.59 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +3 Query: 24 LQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLS 203 L+ GG D+ GFPM+ + + R RLLL G ++S+D+ Sbjct: 50 LKITGGTDRDGFPMRPDLPGTARRRLLLSGGV---GFRPKEKGLRKRKGVRGRVISKDIL 106 Query: 204 VINLVIVKKGE 236 IN V+VK G+ Sbjct: 107 QINTVVVKHGK 117
>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e| Length = 245 Score = 32.7 bits (73), Expect = 0.77 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCF 128 G+ GL + GG D G PM GV SGR ++LL G P F Sbjct: 162 GMPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLL-AGPPGF 201
>RS6E_PYRHO (O58349) 30S ribosomal protein S6e| Length = 125 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 36 GGCDKQGFPMKQGVLTSGRVRLLLHRG 116 GG DK GFPM+ + RVR+LL +G Sbjct: 65 GGTDKDGFPMRPDIHGPRRVRILLSKG 91
>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e| Length = 125 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 24 LQDLGGCDKQGFPMKQGVLTSGRVRLLLHRG 116 L+ GG DK GFPM+ + RVR+LL +G Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e| Length = 125 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 36 GGCDKQGFPMKQGVLTSGRVRLLLHRG 116 GG DK GFPM+ + RVR+LL +G Sbjct: 65 GGTDKDGFPMRPDIHGPRRVRILLSKG 91
>DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11.21)| Length = 470 Score = 32.0 bits (71), Expect = 1.3 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = +3 Query: 192 QDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKI---KKLFNLGKDDDVRSYVNTY 362 +DLSV LVIVK GE L D +KP + P A + + F + ++R + T+ Sbjct: 130 RDLSVAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTETELRPILETF 189 Query: 363 RRTFLNKKGKKVS 401 +N K S Sbjct: 190 AAAGINAPQKPES 202
>YBK7_YEAST (P38162) Protein YBL107C| Length = 196 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = +3 Query: 237 NDLPGLTDTEKPRMR--GPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLNKKGK 392 ND P LT R R P + G DD +R +N YR+ +N K K Sbjct: 23 NDEPSLTTITVTRERCVDPSLIDSFLRFLRHGSDDIIRQKLNNYRKGSINGKNK 76
>RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (PDZ| domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2) Length = 1601 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 296 SPLGSPHPGLLSVSKAWQIILTLLDNHQVDNRQVLADNATTDGLSPAL 153 SP GSPH G + A L+ + ++ +R + N + D +S AL Sbjct: 1241 SPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAAL 1288
>SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog| Length = 584 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -2 Query: 329 LAKVEELLDLGSPLGSPHPGLLSVSKAWQIILTLLDNHQVDNRQVLADNATTDGLSPA 156 + +E+ +DL S G+P G+ V AW+ I T + D L+D T + + A Sbjct: 55 ILSMEDDIDLDSMDGTPSEGVSEVLLAWRHIDTWTSEYNPDLNATLSDPCTANDIKHA 112
>R1AB_PEDV7 (Q91AV2) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6781 Score = 29.6 bits (65), Expect = 6.5 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = +3 Query: 345 SYVNTYRRTFLNKKGKKVSKAPKIQR---LVTPL-TLQRE 452 +Y +TY TFL+ KV++ PKI++ L PL T+ RE Sbjct: 179 TYCSTYEHTFLDGTAMKVARTPKIKKNVVLSEPLATIYRE 218
>RP30_MOUSE (O88796) Ribonuclease P protein subunit p30 (EC 3.1.26.5) (RNaseP| protein p30) (RNase P subunit 2) Length = 268 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/67 (23%), Positives = 32/67 (47%) Frame = +3 Query: 201 SVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRSYVNTYRRTFLN 380 + +NL+ + KG+N + +RGP + + LF L ++D + R FL+ Sbjct: 172 NALNLMQICKGKNVILSSAAERPLEIRGPYDVANLGLLFGLSENDGKAAVSTNCRAVFLH 231 Query: 381 KKGKKVS 401 + +K + Sbjct: 232 GETRKTA 238
>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e| Length = 136 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRG 116 G+ G +Q GGCD GF MK + R R+L G Sbjct: 44 GLAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATG 80
>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e| Length = 136 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 6 GIQGLYLQDLGGCDKQGFPMKQGVLTSGRVRLLLHRG 116 G+ G +Q GGCD GF MK + R R+L G Sbjct: 44 GLAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATG 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,885,611 Number of Sequences: 219361 Number of extensions: 1163597 Number of successful extensions: 3743 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 3525 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3683 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
