| Clone Name | bags13p16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 662 bits (334), Expect = 0.0 Identities = 571/650 (87%) Strand = Plus / Plus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 850 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 909 Query: 75 agcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgtggtc 134 |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 910 agcaaaacaataaataatgatttgaaccccatctggaatgagcactacgaatttgtggtc 969 Query: 135 gaggactcatctacccagcacctgactgtgaaaatttacgacgatgaagggctccagccg 194 |||||| |||||||||||| | |||||||||||||||| || |||||||| |||||| | Sbjct: 970 gaggacacatctacccagcgcttgactgtgaaaatttatgatgatgaaggactccaggca 1029 Query: 195 tcagagattattggctgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaag 254 || ||| |||||||||| ||| | || ||||| || ||| | ||||||||| ||||| Sbjct: 1030 tctgagcttattggctgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaa 1089 Query: 255 gatgtttggttggaacttgtgaaagacctggaaattcagcgtgataagaaacctcgtggt 314 || ||||||||||| ||||| || ||||||||||| ||||| |||||||||| ||| || Sbjct: 1090 gaagtttggttggaccttgtcaaggacctggaaatccagcgggataagaaacgtcgcggg 1149 Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 1150 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 1209 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 1210 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 1269 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 1270 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 1329 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1330 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 1389 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggttgtgactgagacattgaatccg 614 |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 1390 tacctgaagaagggagaaaccaaaaagaagacaagggttgtaactgagacactgaatcca 1449 Query: 615 atatggaatcagacatttgattttgtagtagaagatgccctgcatgattt 664 |||||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct: 1450 atatggaatcagacgtttgattttgttgttgaagatgccttgcatgattt 1499
>dbj|AK119574.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B03, full insert sequence Length = 2075 Score = 662 bits (334), Expect = 0.0 Identities = 571/650 (87%) Strand = Plus / Plus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 1046 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 1105 Query: 75 agcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgtggtc 134 |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1106 agcaaaacaataaataatgatttgaaccccatctggaatgagcactacgaatttgtggtc 1165 Query: 135 gaggactcatctacccagcacctgactgtgaaaatttacgacgatgaagggctccagccg 194 |||||| |||||||||||| | |||||||||||||||| || |||||||| |||||| | Sbjct: 1166 gaggacacatctacccagcgcttgactgtgaaaatttatgatgatgaaggactccaggca 1225 Query: 195 tcagagattattggctgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaag 254 || ||| |||||||||| ||| | || ||||| || ||| | ||||||||| ||||| Sbjct: 1226 tctgagcttattggctgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaa 1285 Query: 255 gatgtttggttggaacttgtgaaagacctggaaattcagcgtgataagaaacctcgtggt 314 || ||||||||||| ||||| || ||||||||||| ||||| |||||||||| ||| || Sbjct: 1286 gaagtttggttggaccttgtcaaggacctggaaatccagcgggataagaaacgtcgcggg 1345 Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 1346 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 1405 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 1406 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 1465 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 1466 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 1525 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1526 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 1585 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggttgtgactgagacattgaatccg 614 |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 1586 tacctgaagaagggagaaaccaaaaagaagacaagggttgtaactgagacactgaatcca 1645 Query: 615 atatggaatcagacatttgattttgtagtagaagatgccctgcatgattt 664 |||||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct: 1646 atatggaatcagacgtttgattttgttgttgaagatgccttgcatgattt 1695
>dbj|AK069706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028A22, full insert sequence Length = 2255 Score = 662 bits (334), Expect = 0.0 Identities = 571/650 (87%) Strand = Plus / Plus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 1047 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 1106 Query: 75 agcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgtggtc 134 |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1107 agcaaaacaataaataatgatttgaaccccatctggaatgagcactacgaatttgtggtc 1166 Query: 135 gaggactcatctacccagcacctgactgtgaaaatttacgacgatgaagggctccagccg 194 |||||| |||||||||||| | |||||||||||||||| || |||||||| |||||| | Sbjct: 1167 gaggacacatctacccagcgcttgactgtgaaaatttatgatgatgaaggactccaggca 1226 Query: 195 tcagagattattggctgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaag 254 || ||| |||||||||| ||| | || ||||| || ||| | ||||||||| ||||| Sbjct: 1227 tctgagcttattggctgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaa 1286 Query: 255 gatgtttggttggaacttgtgaaagacctggaaattcagcgtgataagaaacctcgtggt 314 || ||||||||||| ||||| || ||||||||||| ||||| |||||||||| ||| || Sbjct: 1287 gaagtttggttggaccttgtcaaggacctggaaatccagcgggataagaaacgtcgcggg 1346 Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 1347 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 1406 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 1407 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 1466 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 1467 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 1526 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1527 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 1586 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggttgtgactgagacattgaatccg 614 |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 1587 tacctgaagaagggagaaaccaaaaagaagacaagggttgtaactgagacactgaatcca 1646 Query: 615 atatggaatcagacatttgattttgtagtagaagatgccctgcatgattt 664 |||||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct: 1647 atatggaatcagacgtttgattttgttgttgaagatgccttgcatgattt 1696
>gb|AY108443.1| Zea mays PCO082434 mRNA sequence Length = 1548 Score = 476 bits (240), Expect = e-131 Identities = 546/648 (84%) Strand = Plus / Plus Query: 18 aagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaaagc 77 ||||| ||||||||||| || |||||||||| ||| || || ||||| ||||||||| Sbjct: 337 aagtcggacccttttgcattgatatacatacgtccattgcatgataaaacaaagaaaagc 396 Query: 78 aaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgtggtcgag 137 |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 397 aaaacaattaacaatgatttgaatcccatctggaatgagcactatgaatttgtggttgag 456 Query: 138 gactcatctacccagcacctgactgtgaaaatttacgacgatgaagggctccagccgtca 197 ||| |||||| |||||| ||||||| |||||||| || |||||||| ||||| | ||| Sbjct: 457 gacatatctacgcagcacttgactgtaaaaatttatgatgatgaaggactccaatcatca 516 Query: 198 gagattattggctgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaaggat 257 ||||| ||||| || ||||| ||||||||| | ||||| ||| ||||| || |||||| Sbjct: 517 gagatcattgggtgtgctcgagtagacttagctgatatacagccaggaaaagtgaaggat 576 Query: 258 gtttggttggaacttgtgaaagacctggaaattcagcgtgataagaaacctcgtggtcag 317 | ||||| || |||||||| |||||||||||||| || || |||||||||||||||||| Sbjct: 577 ttatggttagatcttgtgaaggacctggaaattcaacgagacaagaaacctcgtggtcag 636 Query: 318 gtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcctttt 377 || ||||| |||||||| |||||||||| | ||| || ||||| ||| | ||||||||| Sbjct: 637 gttcacctggagctcctctactacccttacgctaagcatgaaggggttcctaatcctttt 696 Query: 378 gctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatggatat 437 |||| |||||| || ||||||| ||||| ||||| ||||| || || |||||||||||| Sbjct: 697 gctaatcagattcaactaacttcattggagaaggttctcaaaaccgagtctaatggatat 756 Query: 438 gatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttatatct 497 ||| | || |||||||| |||||||||| ||||||||||||||| || || || |||||| Sbjct: 757 gatattaatcagaggaaaaatgttattatgagaggagtcctttcggtgacggtcatatct 816 Query: 498 gcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctgtac 557 |||||||| | ||| | ||||| | || ||||||||||||||||||||||||||| Sbjct: 817 gcagaggagttgccacctatggacattggtggcaaggctgacccatttgtggtcctgtac 876 Query: 558 ctgaagaagggggaaaccaaaaagaagacaagggttgtgactgagacattgaatccgata 617 | |||||||| ||||||||||||||||| ||||||||||| || || || ||||| ||| Sbjct: 877 ttaaagaagggagaaaccaaaaagaagacgagggttgtgacagacacgttaaatccaata 936 Query: 618 tggaatcagacatttgattttgtagtagaagatgccctgcatgatttg 665 ||||| |||||||||||||| | ||||||||||| |||||||||||| Sbjct: 937 tggaaccagacatttgatttcatggtagaagatgcactgcatgatttg 984
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 331 bits (167), Expect = 2e-87 Identities = 251/279 (89%) Strand = Plus / Plus Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 67907 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 67966 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 67967 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 68026 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 68027 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 68086 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 68087 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 68146 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggtt 593 |||||||||||||| |||||||||||||||||||||||| Sbjct: 68147 tacctgaagaagggagaaaccaaaaagaagacaagggtt 68185 Score = 196 bits (99), Expect = 7e-47 Identities = 198/231 (85%) Strand = Plus / Plus Query: 90 aatgatttgaaccccatctggaatgaacactatgaatttgtggtcgaggactcatctacc 149 |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct: 67480 aatgatttgaaccccatctggaatgagcactacgaatttgtggtcgaggacacatctacc 67539 Query: 150 cagcacctgactgtgaaaatttacgacgatgaagggctccagccgtcagagattattggc 209 |||| | |||||||||||||||| || |||||||| |||||| | || ||| |||||||| Sbjct: 67540 cagcgcttgactgtgaaaatttatgatgatgaaggactccaggcatctgagcttattggc 67599 Query: 210 tgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaaggatgtttggttggaa 269 || ||| | || ||||| || ||| | ||||||||| ||||| || ||||||||||| Sbjct: 67600 tgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaagaagtttggttggac 67659 Query: 270 cttgtgaaagacctggaaattcagcgtgataagaaacctcgtggtcaggtc 320 ||||| || ||||||||||| ||||| |||||||||| ||| || |||||| Sbjct: 67660 cttgtcaaggacctggaaatccagcgggataagaaacgtcgcgggcaggtc 67710 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 590 ggttgtgactgagacattgaatccgatatggaatcagacatttgattttgtagtagaaga 649 |||||| ||||||||| ||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 68287 ggttgtaactgagacactgaatccaatatggaatcagacgtttgattttgttgttgaaga 68346 Query: 650 tgccctgcatgattt 664 |||| |||||||||| Sbjct: 68347 tgccttgcatgattt 68361 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 67316 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 67375 Query: 75 agcaaaacaata 86 |||||||||||| Sbjct: 67376 agcaaaacaata 67387
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 331 bits (167), Expect = 2e-87 Identities = 251/279 (89%) Strand = Plus / Minus Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 12325924 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 12325865 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 12325864 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 12325805 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 12325804 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 12325745 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 12325744 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 12325685 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggtt 593 |||||||||||||| |||||||||||||||||||||||| Sbjct: 12325684 tacctgaagaagggagaaaccaaaaagaagacaagggtt 12325646 Score = 196 bits (99), Expect = 7e-47 Identities = 198/231 (85%) Strand = Plus / Minus Query: 90 aatgatttgaaccccatctggaatgaacactatgaatttgtggtcgaggactcatctacc 149 |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct: 12326351 aatgatttgaaccccatctggaatgagcactacgaatttgtggtcgaggacacatctacc 12326292 Query: 150 cagcacctgactgtgaaaatttacgacgatgaagggctccagccgtcagagattattggc 209 |||| | |||||||||||||||| || |||||||| |||||| | || ||| |||||||| Sbjct: 12326291 cagcgcttgactgtgaaaatttatgatgatgaaggactccaggcatctgagcttattggc 12326232 Query: 210 tgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaaggatgtttggttggaa 269 || ||| | || ||||| || ||| | ||||||||| ||||| || ||||||||||| Sbjct: 12326231 tgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaagaagtttggttggac 12326172 Query: 270 cttgtgaaagacctggaaattcagcgtgataagaaacctcgtggtcaggtc 320 ||||| || ||||||||||| ||||| |||||||||| ||| || |||||| Sbjct: 12326171 cttgtcaaggacctggaaatccagcgggataagaaacgtcgcgggcaggtc 12326121 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 590 ggttgtgactgagacattgaatccgatatggaatcagacatttgattttgtagtagaaga 649 |||||| ||||||||| ||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 12325544 ggttgtaactgagacactgaatccaatatggaatcagacgtttgattttgttgttgaaga 12325485 Query: 650 tgccctgcatgattt 664 |||| |||||||||| Sbjct: 12325484 tgccttgcatgattt 12325470 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 12326515 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 12326456 Query: 75 agcaaaacaata 86 |||||||||||| Sbjct: 12326455 agcaaaacaata 12326444
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 331 bits (167), Expect = 2e-87 Identities = 251/279 (89%) Strand = Plus / Minus Query: 315 caggtccacctagagctcctatactacccttttgataaacaagaaggagtttccaatcct 374 ||||| ||||| |||||||| || |||||||||| |||||| ||||| |||||||||||| Sbjct: 84573 caggtacacctggagctcctgtattacccttttggtaaacaggaaggggtttccaatcct 84514 Query: 375 tttgctagtcagatccagttaacttctttggaaaaggtcctcaagacggaatctaatgga 434 ||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 84513 tttgcagatcagattcagttaacttctttggagaaggtcctcaagactgagtctaacgga 84454 Query: 435 tatgatgtcaaccagaggaagaatgttattacgagaggagtcctttcagtaactgttata 494 | |||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||| Sbjct: 84453 tttgatgttaaccagaggaaaaatgttattatgagaggagtcctatcagtaactgttatc 84394 Query: 495 tctgcagaggacataccagcaatggatgtgatggggaaggctgacccatttgtggtcctg 554 || ||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 84393 tcagcagaggacttgccaccaatggatgtgatgggcaaggctgacccatttgtagtcctg 84334 Query: 555 tacctgaagaagggggaaaccaaaaagaagacaagggtt 593 |||||||||||||| |||||||||||||||||||||||| Sbjct: 84333 tacctgaagaagggagaaaccaaaaagaagacaagggtt 84295 Score = 196 bits (99), Expect = 7e-47 Identities = 198/231 (85%) Strand = Plus / Minus Query: 90 aatgatttgaaccccatctggaatgaacactatgaatttgtggtcgaggactcatctacc 149 |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct: 85000 aatgatttgaaccccatctggaatgagcactacgaatttgtggtcgaggacacatctacc 84941 Query: 150 cagcacctgactgtgaaaatttacgacgatgaagggctccagccgtcagagattattggc 209 |||| | |||||||||||||||| || |||||||| |||||| | || ||| |||||||| Sbjct: 84940 cagcgcttgactgtgaaaatttatgatgatgaaggactccaggcatctgagcttattggc 84881 Query: 210 tgcgctcgtgtagacttatcggatatcatgcctggaaaggtcaaggatgtttggttggaa 269 || ||| | || ||||| || ||| | ||||||||| ||||| || ||||||||||| Sbjct: 84880 tgtgctagagtggacttgtctgatcttcagcctggaaaagtcaaagaagtttggttggac 84821 Query: 270 cttgtgaaagacctggaaattcagcgtgataagaaacctcgtggtcaggtc 320 ||||| || ||||||||||| ||||| |||||||||| ||| || |||||| Sbjct: 84820 cttgtcaaggacctggaaatccagcgggataagaaacgtcgcgggcaggtc 84770 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 590 ggttgtgactgagacattgaatccgatatggaatcagacatttgattttgtagtagaaga 649 |||||| ||||||||| ||||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 84193 ggttgtaactgagacactgaatccaatatggaatcagacgtttgattttgttgttgaaga 84134 Query: 650 tgccctgcatgattt 664 |||| |||||||||| Sbjct: 84133 tgccttgcatgattt 84119 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 15 gggaagtctgacccttttgctgtgctatacatacgcccactgagtgcaaaaacgaagaaa 74 |||||||||||||||||||||||| ||||||| || ||| || | |||| ||||||| Sbjct: 85164 gggaagtctgacccttttgctgtgttatacattcggccattgcaagataaaatgaagaaa 85105 Query: 75 agcaaaacaata 86 |||||||||||| Sbjct: 85104 agcaaaacaata 85093
>ref|XM_474098.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1728 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 63 aaaacgaagaaaagcaaaacaataaacaatgatttgaaccccatctggaatgaacact 120 |||| ||||| ||| |||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 889 aaaatgaagagaagtaaaacaattaacaacgacttgaaccctatctggaatgaacact 946
>ref|NM_121148.1| Arabidopsis thaliana unknown protein AT5G11100 mRNA, complete cds Length = 1725 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaagatgccctgcatgat 662 ||||||||| | ||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 1477 ttgaatccggtttggaaccagacgtttgattttgtagtggaagatgctttgcatgat 1533
>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project) Length = 96379 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaagatgccctgcatgat 662 ||||||||| | ||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 86113 ttgaatccggtttggaaccagacgtttgattttgtagtggaagatgctttgcatgat 86169
>ref|NM_100429.1| Arabidopsis thaliana unknown protein AT1G05500 mRNA, complete cds Length = 1587 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 74 aagcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgt 130 |||||| ||||| |||||||| |||| |||||||||||||| || | ||||||||| Sbjct: 804 aagcaagacaattaacaatgacctgaatcccatctggaatgagcattttgaatttgt 860 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaaga 649 ||||| ||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 1342 ttgaacccggtatggaaccagacttttgattttgtagttgaaga 1385
>gb|BT008907.1| Arabidopsis thaliana At1g05500 mRNA, complete cds Length = 1683 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 74 aagcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgt 130 |||||| ||||| |||||||| |||| |||||||||||||| || | ||||||||| Sbjct: 900 aagcaagacaattaacaatgacctgaatcccatctggaatgagcattttgaatttgt 956 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaaga 649 ||||| ||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 1438 ttgaacccggtatggaaccagacttttgattttgtagttgaaga 1481
>gb|AY140038.1| Arabidopsis thaliana Ca2+-dependent lipid-binding protein, putative (At1g05500) mRNA, complete cds Length = 2052 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 74 aagcaaaacaataaacaatgatttgaaccccatctggaatgaacactatgaatttgt 130 |||||| ||||| |||||||| |||| |||||||||||||| || | ||||||||| Sbjct: 1023 aagcaagacaattaacaatgacctgaatcccatctggaatgagcattttgaatttgt 1079 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaaga 649 ||||| ||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 1561 ttgaacccggtatggaaccagacttttgattttgtagttgaaga 1604
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I, complete sequence Length = 84203 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaaga 649 ||||| ||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 60617 ttgaacccggtatggaaccagacttttgattttgtagttgaaga 60660 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacactatgaatttgt 130 |||||||| |||| |||||||||||||| || | ||||||||| Sbjct: 59901 aacaatgacctgaatcccatctggaatgagcattttgaatttgt 59944
>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete sequence Length = 103223 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Plus Query: 606 ttgaatccgatatggaatcagacatttgattttgtagtagaaga 649 ||||| ||| ||||||| ||||| |||||||||||||| ||||| Sbjct: 10068 ttgaacccggtatggaaccagacttttgattttgtagttgaaga 10111 Score = 40.1 bits (20), Expect = 9.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacactatgaatttgt 130 |||||||| |||| |||||||||||||| || | ||||||||| Sbjct: 9352 aacaatgacctgaatcccatctggaatgagcattttgaatttgt 9395
>gb|AC090312.7| Homo sapiens chromosome 18, clone RP11-752P2, complete sequence Length = 171438 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 aaaaacgaagaaaagcaaaacaa 84 ||||||||||||||||||||||| Sbjct: 149249 aaaaacgaagaaaagcaaaacaa 149271
>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence Length = 92738 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Minus Query: 87 aacaatgatttgaaccccatctggaatgaacact 120 |||||||||||||| || || ||||||||||||| Sbjct: 17700 aacaatgatttgaatccaatatggaatgaacact 17667
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 aatctaatggatatgatgtcaa 445 |||||||||||||||||||||| Sbjct: 97994 aatctaatggatatgatgtcaa 97973
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacact 120 ||||| || |||||||| |||||||||||||||| Sbjct: 6699 aacaacgacttgaaccctatctggaatgaacact 6732
>gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111861 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 623 tcagacatttgattttgtagta 644 |||||||||||||||||||||| Sbjct: 68921 tcagacatttgattttgtagta 68900
>ref|XM_627701.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit Rpn6-like; PINT domain containing protein (cgd6_3590), partial mRNA Length = 1269 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 424 aatctaatggatatgatgtcaa 445 |||||||||||||||||||||| Sbjct: 271 aatctaatggatatgatgtcaa 292
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacact 120 ||||| || |||||||| |||||||||||||||| Sbjct: 32863850 aacaacgacttgaaccctatctggaatgaacact 32863883
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacact 120 ||||| || |||||||| |||||||||||||||| Sbjct: 59143 aacaacgacttgaaccctatctggaatgaacact 59176
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 44.1 bits (22), Expect = 0.58 Identities = 31/34 (91%) Strand = Plus / Plus Query: 87 aacaatgatttgaaccccatctggaatgaacact 120 ||||| || |||||||| |||||||||||||||| Sbjct: 126137 aacaacgacttgaaccctatctggaatgaacact 126170
>gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's Hospital Oakland Research Institute) complete sequence Length = 249629 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 agtcctttcagtaactgttat 493 ||||||||||||||||||||| Sbjct: 158420 agtcctttcagtaactgttat 158400
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence Length = 124972 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 586 caagggttgtgactgagacattgaa 610 ||||||||||||| ||||||||||| Sbjct: 92919 caagggttgtgacagagacattgaa 92895
>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence Length = 115984 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 525 atggggaaggctgacccatttgtggtcct 553 ||||| ||||||||||||||||| ||||| Sbjct: 111953 atgggcaaggctgacccatttgttgtcct 111981
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence Length = 127295 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 caagggttgtgactgagacattgaa 610 ||||||||||||| ||||||||||| Sbjct: 33562 caagggttgtgacagagacattgaa 33586
>emb|AL138689.22| Human DNA sequence from clone RP11-272L14 on chromosome 13 Contains the EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5)and a CpG island, complete sequence Length = 103616 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 aaaaagaagacaagggttgtg 596 ||||||||||||||||||||| Sbjct: 63122 aaaaagaagacaagggttgtg 63102
>emb|CR382288.10| Zebrafish DNA sequence from clone CH211-234C14 in linkage group 25, complete sequence Length = 146063 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tgacccttttgctgtgctata 43 ||||||||||||||||||||| Sbjct: 105805 tgacccttttgctgtgctata 105785
>emb|BX537326.9| Zebrafish DNA sequence from clone DKEY-4I23 in linkage group 2, complete sequence Length = 237869 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 tgtttggttggaacttgtgaa 277 ||||||||||||||||||||| Sbjct: 173726 tgtttggttggaacttgtgaa 173706
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 tatcatgcctggaaaggtcaa 253 ||||||||||||||||||||| Sbjct: 320641 tatcatgcctggaaaggtcaa 320621
>gb|AC007876.2|AC007876 Homo sapiens BAC clone RP11-65G9 from Y, complete sequence Length = 164879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 catctacccagcacctgactg 162 ||||||||||||||||||||| Sbjct: 88312 catctacccagcacctgactg 88332
>emb|BX957317.12| Zebrafish DNA sequence from clone DKEY-150K17 in linkage group 19, complete sequence Length = 222684 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 aaaagcaaaacaataaacaat 92 ||||||||||||||||||||| Sbjct: 210909 aaaagcaaaacaataaacaat 210929
>gb|AC160244.11| Mus musculus chromosome 5, clone RP24-212G3, complete sequence Length = 150276 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaaagcaaaacaataaacaa 91 |||||||||||||||||||| Sbjct: 10045 aaaagcaaaacaataaacaa 10026
>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence Length = 252587 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 619 ggaatcagacatttgattttgtagtaga 646 |||| |||||| |||||||||||||||| Sbjct: 99126 ggaaacagacacttgattttgtagtaga 99153
>gb|AC146027.2| Pan troglodytes BAC clone RP43-120L21 from 7, complete sequence Length = 182348 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaaagcaaaacaataaacaa 91 |||||||||||||||||||| Sbjct: 44976 aaaagcaaaacaataaacaa 44995
>ref|XM_366709.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02785.4) partial mRNA Length = 969 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 atcatgcctggaaaggtcaa 253 |||||||||||||||||||| Sbjct: 523 atcatgcctggaaaggtcaa 542
>ref|XM_864140.1| PREDICTED: Bos taurus similar to Tripeptidyl-peptidase 2 (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase), transcript variant 2 (LOC526052), mRNA Length = 4632 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgcccactgagtgcaaaaac 67 |||||||||||||||||||| Sbjct: 2392 cgcccactgagtgcaaaaac 2411
>ref|XM_604411.2| PREDICTED: Bos taurus similar to Tripeptidyl-peptidase 2 (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase), transcript variant 1 (LOC526052), mRNA Length = 4593 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgcccactgagtgcaaaaac 67 |||||||||||||||||||| Sbjct: 2392 cgcccactgagtgcaaaaac 2411
>gb|BT013623.1| Lycopersicon esculentum clone 132425F, mRNA sequence Length = 2230 Score = 40.1 bits (20), Expect = 9.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 68 gaagaaaagcaaaacaataaacaatgatttgaaccccatctggaatga 115 |||||| ||||||||||| ||||| || |||| || ||||||||||| Sbjct: 1063 gaagaagagcaaaacaattaacaacgaactgaatccaatctggaatga 1110
>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence Length = 208404 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ttttgataaacaagaaggag 363 |||||||||||||||||||| Sbjct: 19728 ttttgataaacaagaaggag 19709
>ref|XM_853995.1| PREDICTED: Canis familiaris similar to pancreas-enriched phospholipase C, transcript variant 2 (LOC486808), mRNA Length = 6882 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tttgaaccccatctggaatgaaca 118 |||||||||||| ||||||||||| Sbjct: 5724 tttgaaccccatgtggaatgaaca 5747
>ref|XM_543937.2| PREDICTED: Canis familiaris similar to pancreas-enriched phospholipase C, transcript variant 1 (LOC486808), mRNA Length = 6930 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tttgaaccccatctggaatgaaca 118 |||||||||||| ||||||||||| Sbjct: 5772 tttgaaccccatgtggaatgaaca 5795
>ref|XM_844187.1| PREDICTED: Canis familiaris similar to secreted frizzled-related protein 1 (LOC482844), mRNA Length = 1277 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 tggtcctgtacctgaagaaggggg 570 ||||||||||||||||||| |||| Sbjct: 974 tggtcctgtacctgaagaatgggg 997
>emb|CR792443.13| Zebrafish DNA sequence from clone DKEY-52K1 in linkage group 13, complete sequence Length = 217981 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 caaaaacgaagaaaagcaaaacaa 84 ||||||| |||||||||||||||| Sbjct: 174150 caaaaacaaagaaaagcaaaacaa 174127
>emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chromosome 17, complete sequence Length = 135274 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ggaaaccaaaaagaagacaa 588 |||||||||||||||||||| Sbjct: 10373 ggaaaccaaaaagaagacaa 10354
>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3, complete sequence Length = 145085 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 aatcagacatttgattttgt 640 |||||||||||||||||||| Sbjct: 16454 aatcagacatttgattttgt 16435
>gb|AC004513.1|HUAC004513 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-926E7, complete sequence Length = 101311 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 actgagacattgaatccgat 616 |||||||||||||||||||| Sbjct: 43509 actgagacattgaatccgat 43490
>gb|AY128412.1| Mus musculus guanylate binding protein 5 (Gbp5) gene, complete cds Length = 31023 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaagaaaagcaaaacaataa 87 |||||||||||||||||||| Sbjct: 17348 gaagaaaagcaaaacaataa 17329
>gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosome 10, complete sequence Length = 211025 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gaagaaaagcaaaacaataaacaa 91 |||||||| ||||||||||||||| Sbjct: 122833 gaagaaaatcaaaacaataaacaa 122810
>emb|BX323464.18| Zebrafish DNA sequence from clone CH211-93E11 in linkage group 12, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgaagaaaagcaaaacaat 85 |||||||||||||||||||| Sbjct: 99338 acgaagaaaagcaaaacaat 99319
>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete sequence Length = 79274 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ggaaaccaaaaagaagacaa 588 |||||||||||||||||||| Sbjct: 5480 ggaaaccaaaaagaagacaa 5461
>emb|AL355274.22| Human DNA sequence from clone RP11-87P4 on chromosome 1 Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 137621 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 agaaaagcaaaacaataaacaatg 93 ||||||||||||||| |||||||| Sbjct: 128431 agaaaagcaaaacaacaaacaatg 128454
>emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chromosome 11 Contains the 5' end of a variant of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 194171 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 cagatccagttaacttcttt 403 |||||||||||||||||||| Sbjct: 164976 cagatccagttaacttcttt 164995
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgacgatgaagggctccagc 192 |||||||||||||||||||| Sbjct: 1901749 cgacgatgaagggctccagc 1901768
>gb|AC097492.6| Homo sapiens BAC clone RP11-264A4 from 4, complete sequence Length = 142890 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaaacaataaacaatgattt 97 |||||||||||||||||||| Sbjct: 87476 aaaacaataaacaatgattt 87457
>dbj|AK157154.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830205E22 product:unclassifiable, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aagaaaagcaaaacaataaacaat 92 |||||||||||||||| ||||||| Sbjct: 260 aagaaaagcaaaacaacaaacaat 237
>emb|BX001032.12| Zebrafish DNA sequence from clone CH211-14K18 in linkage group 12, complete sequence Length = 162109 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgaagaaaagcaaaacaat 85 |||||||||||||||||||| Sbjct: 101537 acgaagaaaagcaaaacaat 101518
>dbj|AK171953.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830021I15 product:unclassifiable, full insert sequence Length = 3418 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aagaaaagcaaaacaataaacaat 92 |||||||||||||||| ||||||| Sbjct: 260 aagaaaagcaaaacaacaaacaat 237
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaaagcaaaacaataaacaa 91 |||||||||||||||||||| Sbjct: 606 aaaagcaaaacaataaacaa 625
>dbj|AK046847.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830028E17 product:unclassifiable, full insert sequence Length = 4645 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aagaaaagcaaaacaataaacaat 92 |||||||||||||||| ||||||| Sbjct: 1410 aagaaaagcaaaacaacaaacaat 1387
>gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome 10, complete sequence Length = 222815 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gaagaaaagcaaaacaataaacaa 91 |||||||| ||||||||||||||| Sbjct: 1694 gaagaaaatcaaaacaataaacaa 1671
>gb|AC109614.9| Mus musculus chromosome 5, clone RP23-107M21, complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gatttgaaccccatctggaa 112 |||||||||||||||||||| Sbjct: 113151 gatttgaaccccatctggaa 113170
>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence Length = 199295 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttttgataaacaagaaggag 363 |||||||||||||||||||| Sbjct: 479 ttttgataaacaagaaggag 498
>gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 actgagacattgaatccgat 616 |||||||||||||||||||| Sbjct: 53903 actgagacattgaatccgat 53922
>emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 in linkage group 3, complete sequence Length = 180858 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aagaaaagcaaaacaataaa 88 |||||||||||||||||||| Sbjct: 106132 aagaaaagcaaaacaataaa 106151
>emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequence tag Length = 300 Score = 40.1 bits (20), Expect = 9.1 Identities = 62/76 (81%) Strand = Plus / Plus Query: 586 caagggttgtgactgagacattgaatccgatatggaatcagacatttgattttgtagtag 645 |||||||||||| ||| | ||||| ||| | |||||||| || ||||| ||||| || | Sbjct: 1 caagggttgtgaatgaaagcttgaacccggtttggaatcaaacttttgactttgttgtcg 60 Query: 646 aagatgccctgcatga 661 |||||| | ||||||| Sbjct: 61 aagatggcttgcatga 76
>emb|BX511028.13| Zebrafish DNA sequence from clone DKEY-161N17 in linkage group 20, complete sequence Length = 225010 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaaagcaaaacaataaacaa 91 |||||||||||||||||||| Sbjct: 41880 aaaagcaaaacaataaacaa 41899
>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence Length = 215363 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ttttgataaacaagaaggag 363 |||||||||||||||||||| Sbjct: 105648 ttttgataaacaagaaggag 105629
>gb|AC121538.11| Mus musculus chromosome 1, clone RP23-125I14, complete sequence Length = 190423 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aagaaaagcaaaacaataaacaat 92 |||||||||||||||| ||||||| Sbjct: 72452 aagaaaagcaaaacaacaaacaat 72429
>gb|DQ221253.1| Danio rerio voltage-gated sodium channel Nav1.4a (Nav1.4a) gene, complete cds Length = 26428 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 acgaagaaaagcaaaacaat 85 |||||||||||||||||||| Sbjct: 16976 acgaagaaaagcaaaacaat 16995
>emb|AL691438.16| Mouse DNA sequence from clone RP23-243L4 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2, complete sequence Length = 197300 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aagaaaagcaaaacaataaa 88 |||||||||||||||||||| Sbjct: 54688 aagaaaagcaaaacaataaa 54707
>gb|AC102108.12| Mus musculus chromosome 3, clone RP23-100J23, complete sequence Length = 216506 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gaagaaaagcaaaacaataa 87 |||||||||||||||||||| Sbjct: 151934 gaagaaaagcaaaacaataa 151953
>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete sequence Length = 219778 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gacctggaaattcagcgtga 298 |||||||||||||||||||| Sbjct: 138065 gacctggaaattcagcgtga 138084 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,533,550 Number of Sequences: 3902068 Number of extensions: 6533550 Number of successful extensions: 135935 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 135647 Number of HSP's gapped (non-prelim): 276 length of query: 665 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 642 effective length of database: 17,143,297,704 effective search space: 11005997125968 effective search space used: 11005997125968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)