ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal9k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
2dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
3dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
4gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 155 2e-34
5gb|AY104589.1| Zea mays PCO067801 mRNA sequence 155 2e-34
6gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 143 9e-31
7gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 143 9e-31
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
9gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete s... 58 4e-05
10gb|BT014050.1| Lycopersicon esculentum clone 133147F, mRNA sequence 56 2e-04
11ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 54 7e-04
12ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protei... 50 0.010
13emb|AJ879936.2| Capsicum chinense mRNA for putative receptor ass... 50 0.010
14ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G6331... 48 0.041
15gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.041
16ref|XM_476832.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.041
17ref|XM_476831.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.041
18emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1... 48 0.041
19emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.041
20dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
21dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
22dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
23dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.041
24dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.041
25gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds 48 0.041
26emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 i... 46 0.16
27emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, co... 46 0.16
28emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Co... 46 0.16
29gb|AY110080.1| Zea mays CL3663_1 mRNA sequence 46 0.16
30gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence 44 0.65
31gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence 44 0.65
32gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Canc... 44 0.65
33ref|NM_001016838.2| Xenopus tropicalis hypothetical protein LOC5... 42 2.5
34ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.5
35gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequ... 42 2.5
36dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, ... 42 2.5
37dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, ... 42 2.5
38gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.41... 42 2.5
39emb|CR855480.2| Xenopus tropicalis finished cDNA, clone TNeu095j18 42 2.5
40dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 2.5 
>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score =  210 bits (106), Expect = 5e-51
 Identities = 231/270 (85%), Gaps = 2/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 466 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 631 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 572

                                                                       
Query: 526 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 571 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 512

                                                                       
Query: 586 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 645
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 511 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 452

                                                                       
Query: 646 aaacccaagatagcaagattgtgcgggtgcctgtgctgatagatg-tacaatgggatcat 704
           | ||||| |  | |||  ||||| |||||  |||||||||| ||| |||||||||| |||
Sbjct: 451 agacccaggtaaacaaagttgtgtgggtgtttgtgctgata-atgatacaatgggaccat 393

                                         
Query: 705 caggatgaaggggaggacagcgagcacgag 734
           ||||| |||||||||||| |||||||||||
Sbjct: 392 caggacgaaggggaggacggcgagcacgag 363



 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 265 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                                       
Query: 325 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 713

               
Query: 385 ccaa 388
           ||||
Sbjct: 712 ccaa 709
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score =  210 bits (106), Expect = 5e-51
 Identities = 231/270 (85%), Gaps = 2/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 466 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 631 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 572

                                                                       
Query: 526 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 571 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 512

                                                                       
Query: 586 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 645
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 511 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 452

                                                                       
Query: 646 aaacccaagatagcaagattgtgcgggtgcctgtgctgatagatg-tacaatgggatcat 704
           | ||||| |  | |||  ||||| |||||  |||||||||| ||| |||||||||| |||
Sbjct: 451 agacccaggtaaacaaagttgtgtgggtgtttgtgctgata-atgatacaatgggaccat 393

                                         
Query: 705 caggatgaaggggaggacagcgagcacgag 734
           ||||| |||||||||||| |||||||||||
Sbjct: 392 caggacgaaggggaggacggcgagcacgag 363



 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 265 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 832 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 773

                                                                       
Query: 325 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 772 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 713

               
Query: 385 ccaa 388
           ||||
Sbjct: 712 ccaa 709
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score =  210 bits (106), Expect = 5e-51
 Identities = 231/270 (85%), Gaps = 2/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 466 agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
           |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 632 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 573

                                                                       
Query: 526 aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
           || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 572 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 513

                                                                       
Query: 586 atggttccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaac 645
           ||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||
Sbjct: 512 attttcccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaac 453

                                                                       
Query: 646 aaacccaagatagcaagattgtgcgggtgcctgtgctgatagatg-tacaatgggatcat 704
           | ||||| |  | |||  ||||| |||||  |||||||||| ||| |||||||||| |||
Sbjct: 452 agacccaggtaaacaaagttgtgtgggtgtttgtgctgata-atgatacaatgggaccat 394

                                         
Query: 705 caggatgaaggggaggacagcgagcacgag 734
           ||||| |||||||||||| |||||||||||
Sbjct: 393 caggacgaaggggaggacggcgagcacgag 364



 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                       
Query: 265 aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
           ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 833 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 774

                                                                       
Query: 325 gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
           ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 773 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 714

               
Query: 385 ccaa 388
           ||||
Sbjct: 713 ccaa 710
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score =  155 bits (78), Expect = 2e-34
 Identities = 200/238 (84%), Gaps = 2/238 (0%)
 Strand = Plus / Minus

                                                                       
Query: 499 aattccttgcccttctttgaagcccagaatgtgtacgcagtcagagagacaaccacagct 558
           |||||||||||||||||||| |||||||| |  |||||||||||||| || |||||  | 
Sbjct: 606 aattccttgcccttctttgacgcccagaaagcatacgcagtcagagaaaccaccacgcca 547

                                                                       
Query: 559 gaggtcagtaccaaagcctgaagcacaatggttccttcagtgtttgcacaagccacacca 618
           |  ||||| || |||||||  || || ||  | ||||  ||||| |||||||||||||| 
Sbjct: 546 gccgtcagcactaaagcctccagaacgattttcccttgggtgttagcacaagccacaccg 487

                                                                       
Query: 619 atgctgaagctcaagcacagagtgaacaaacccaagatagcaagattgtgcgggtgcctg 678
           |||||||||||||||||||  ||||||| ||||| || | | | |||||| |||||| ||
Sbjct: 486 atgctgaagctcaagcacaacgtgaacagacccaggaaaacgaaattgtgtgggtgcttg 427

                                                                     
Query: 679 tgctgatagatg-tacaatgggatcatcaggatgaaggggaggacagcgagcacgagc 735
           |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 426 tgctgata-atgatacaatgggatcatcaggatgaagggcaggacggcgagcacgagc 370



 Score =  137 bits (69), Expect = 6e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 243 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 302
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 862 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 803

                                                                       
Query: 303 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 362
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 802 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 743

                                
Query: 363 gaagcctgagaacaccagagc 383
           |||||||||||| ||||||||
Sbjct: 742 gaagcctgagaagaccagagc 722
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score =  155 bits (78), Expect = 2e-34
 Identities = 200/238 (84%), Gaps = 2/238 (0%)
 Strand = Plus / Minus

                                                                       
Query: 499 aattccttgcccttctttgaagcccagaatgtgtacgcagtcagagagacaaccacagct 558
           |||||||||||||||||||| |||||||| |  |||||||||||||| || |||||  | 
Sbjct: 652 aattccttgcccttctttgacgcccagaaagcatacgcagtcagagaaaccaccacgcca 593

                                                                       
Query: 559 gaggtcagtaccaaagcctgaagcacaatggttccttcagtgtttgcacaagccacacca 618
           |  ||||| || |||||||  || || ||  | ||||  ||||| |||||||||||||| 
Sbjct: 592 gccgtcagcactaaagcctccagaacgattttcccttgggtgttagcacaagccacaccg 533

                                                                       
Query: 619 atgctgaagctcaagcacagagtgaacaaacccaagatagcaagattgtgcgggtgcctg 678
           |||||||||||||||||||  ||||||| ||||| || | | | |||||| |||||| ||
Sbjct: 532 atgctgaagctcaagcacaacgtgaacagacccaggaaaacgaaattgtgtgggtgcttg 473

                                                                     
Query: 679 tgctgatagatg-tacaatgggatcatcaggatgaaggggaggacagcgagcacgagc 735
           |||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 472 tgctgata-atgatacaatgggatcatcaggatgaagggcaggacggcgagcacgagc 416



 Score =  137 bits (69), Expect = 6e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 243 cctgagcatctgtaggatggtgaggaacaggttgaggatgtcgaggtaaagttcaacaga 302
           ||||||||| |  ||||||| |||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 908 cctgagcatgttcaggatggagaggaacaggttcaggatgtcgaggtacagcccaaccga 849

                                                                       
Query: 303 agcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgat 362
            ||||||||||||||||| || ||||||||||| |||| |||||| |||||||| | |||
Sbjct: 848 cgcccagatgtactcgtcgtaggtgtggcgcttgatcaggttctcggtgtcgtacaggat 789

                                
Query: 363 gaagcctgagaacaccagagc 383
           |||||||||||| ||||||||
Sbjct: 788 gaagcctgagaagaccagagc 768
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                          
Query: 265    aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
              ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 147801 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 147860

                                                                          
Query: 325    gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
              ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 147861 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 147920

                  
Query: 385    ccaa 388
              ||||
Sbjct: 147921 ccaa 147924



 Score =  131 bits (66), Expect = 4e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                          
Query: 466    agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
              |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 148110 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 148169

                                                                          
Query: 526    aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
              || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 148170 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 148229

                
Query: 586    at 587
              ||
Sbjct: 148230 at 148231



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 592    ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 651
              |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 148322 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 148381

               
Query: 652    a 652
              |
Sbjct: 148382 a 148382
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                         
Query: 265   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
             ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 45164 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 45223

                                                                         
Query: 325   gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
             ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 45224 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 45283

                 
Query: 385   ccaa 388
             ||||
Sbjct: 45284 ccaa 45287



 Score =  131 bits (66), Expect = 4e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                         
Query: 466   agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
             |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 45473 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 45532

                                                                         
Query: 526   aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
             || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 45533 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 45592

               
Query: 586   at 587
             ||
Sbjct: 45593 at 45594



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 592   ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 651
             |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 45685 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 45744

              
Query: 652   a 652
             |
Sbjct: 45745 a 45745
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  143 bits (72), Expect = 9e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                            
Query: 265      aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
                ||||||| |||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 19444452 aggaacaagttgaggatgtcaaggtagagctcaacagaggcccaaatgtagtcgtcataa 19444511

                                                                            
Query: 325      gtgtggcgctttatcaagttctcagtgtcgtagacgatgaagcctgagaacaccagagct 384
                ||||||||||||||||||||||| |||||||||| |||||| |||||||| || | ||||
Sbjct: 19444512 gtgtggcgctttatcaagttctctgtgtcgtagatgatgaaacctgagaaaactaaagct 19444571

                    
Query: 385      ccaa 388
                ||||
Sbjct: 19444572 ccaa 19444575



 Score =  131 bits (66), Expect = 4e-27
 Identities = 108/122 (88%)
 Strand = Plus / Plus

                                                                            
Query: 466      agagcagaaaacagaaatggtccaaggtaactaaattccttgcccttctttgaagcccag 525
                |||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||||
Sbjct: 19444761 agagcagaaaacagaattggtccaagataaccaaattctttccccttctttgaagcccag 19444820

                                                                            
Query: 526      aatgtgtacgcagtcagagagacaaccacagctgaggtcagtaccaaagcctgaagcaca 585
                || || |||||||||| |||| |||||||||||||||||| ||  || |||| |||||||
Sbjct: 19444821 aaagtatacgcagtcaaagaggcaaccacagctgaggtcaatattaatgcctcaagcaca 19444880

                  
Query: 586      at 587
                ||
Sbjct: 19444881 at 19444882



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 592      ccttcagtgtttgcacaagccacaccaatgctgaagctcaagcacagagtgaacaaaccc 651
                |||| |||||| ||||| ||||||||||| ||||| ||||||||||  ||||||| ||||
Sbjct: 19444973 ccttgagtgttagcacatgccacaccaatactgaaactcaagcacaacgtgaacagaccc 19445032

                 
Query: 652      a 652
                |
Sbjct: 19445033 a 19445033
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>gb|AC162030.8| Medicago truncatula clone mth2-178b21, complete sequence
          Length = 85986

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 487   ccaaggtaactaaattccttgcccttctttgaagcccagaa 527
             |||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 72378 ccaaggtagctaaaatccttgcccttcttggaagcccagaa 72418



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                         
Query: 265   aggaacaggttgaggatgtcgaggtaaagttcaacagaagcccagatgtactcgtcataa 324
             ||||||||||| || |||||||| |||||    ||||| ||||  ||||| || ||||||
Sbjct: 71398 aggaacaggttcagaatgtcgagataaagagtgacagaggccccaatgtattcatcataa 71457

                                                
Query: 325   gtgtggcgctttatcaagttctcagtgtcgtagac 359
             || |||||||| ||||  || ||||||||||||||
Sbjct: 71458 gtatggcgcttgatcagattgtcagtgtcgtagac 71492
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>gb|BT014050.1| Lycopersicon esculentum clone 133147F, mRNA sequence
          Length = 1164

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 502 tccttgcccttctttgaagcccagaatgtgta 533
           |||||||||||||| |||||||||||||||||
Sbjct: 496 tccttgcccttcttagaagcccagaatgtgta 465
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>ref|XM_367013.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03089.4) partial mRNA
          Length = 849

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 256 aggatggtgaggaacaggttgaggatgtcgaggta 290
           ||||||| |||||||||||||| ||||||||||||
Sbjct: 818 aggatggcgaggaacaggttgatgatgtcgaggta 784
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>ref|XM_748615.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09310)
           partial mRNA
          Length = 846

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 265 aggaacaggttgaggatgtcgaggtaaag 293
           |||||||||||||||||||| ||||||||
Sbjct: 773 aggaacaggttgaggatgtccaggtaaag 745
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>emb|AJ879936.2| Capsicum chinense mRNA for putative receptor associated protein
           (ORF1)
          Length = 1037

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 303 agcccagatgtactcgtcataagtgtggcgctt 335
           ||||||||||||||| |||||||||| ||||||
Sbjct: 756 agcccagatgtactcatcataagtgtagcgctt 724
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>ref|NM_116196.1| Arabidopsis thaliana glutamate binding AT3G63310 mRNA, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 297 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 344
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
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>gb|BT020236.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 892

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 297 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 344
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 741 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 694
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>ref|XM_476832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 507 gcccttctttgaagcccagaatgtgtacgcagtcag 542
           |||| |||||| ||||||||||||||| ||||||||
Sbjct: 619 gcccctctttgcagcccagaatgtgtaggcagtcag 584



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 304 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 363
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 822 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 763

                
Query: 364 aagcc 368
            ||||
Sbjct: 762 tagcc 758
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>ref|XM_476831.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 923

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 349 gtgtcgtagacgatgaagcctgagaacaccag 380
           |||||||||| ||||||||| |||||||||||
Sbjct: 626 gtgtcgtagatgatgaagccggagaacaccag 595
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>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project)
          Length = 79153

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 297   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 344
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 10307 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 10354
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>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2
          Length = 75106

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 297   aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 344
             ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 55690 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 55737
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 507     gcccttctttgaagcccagaatgtgtacgcagtcag 542
               |||| |||||| ||||||||||||||| ||||||||
Sbjct: 4122063 gcccctctttgcagcccagaatgtgtaggcagtcag 4122098



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 349     gtgtcgtagacgatgaagcctgagaacaccag 380
               |||||||||| ||||||||| |||||||||||
Sbjct: 4119903 gtgtcgtagatgatgaagccggagaacaccag 4119934



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 304     gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 363
               ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 4121765 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 4121824

                    
Query: 364     aagcc 368
                ||||
Sbjct: 4121825 tagcc 4121829
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>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1361_E02
          Length = 100168

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 507  gcccttctttgaagcccagaatgtgtacgcagtcag 542
            |||| |||||| ||||||||||||||| ||||||||
Sbjct: 5685 gcccctctttgcagcccagaatgtgtaggcagtcag 5720



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 349  gtgtcgtagacgatgaagcctgagaacaccag 380
            |||||||||| ||||||||| |||||||||||
Sbjct: 3525 gtgtcgtagatgatgaagccggagaacaccag 3556



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 304  gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 363
            ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 5387 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 5446

                 
Query: 364  aagcc 368
             ||||
Sbjct: 5447 tagcc 5451
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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534H07
          Length = 144689

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 507    gcccttctttgaagcccagaatgtgtacgcagtcag 542
              |||| |||||| ||||||||||||||| ||||||||
Sbjct: 114921 gcccctctttgcagcccagaatgtgtaggcagtcag 114956



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 349    gtgtcgtagacgatgaagcctgagaacaccag 380
              |||||||||| ||||||||| |||||||||||
Sbjct: 112761 gtgtcgtagatgatgaagccggagaacaccag 112792



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 304    gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 363
              ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 114623 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 114682

                   
Query: 364    aagcc 368
               ||||
Sbjct: 114683 tagcc 114687
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>dbj|AK073781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H10, full
           insert sequence
          Length = 1203

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 507 gcccttctttgaagcccagaatgtgtacgcagtcag 542
           |||| |||||| ||||||||||||||| ||||||||
Sbjct: 617 gcccctctttgcagcccagaatgtgtaggcagtcag 582



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 304 gcccagatgtactcgtcataagtgtggcgctttatcaagttctcagtgtcgtagacgatg 363
           ||||||| ||||| ||| || |||| |||||| || | ||| || |||||||||||||||
Sbjct: 820 gcccagacgtactggtcgtaggtgtagcgcttgatgatgttgtccgtgtcgtagacgatg 761

                
Query: 364 aagcc 368
            ||||
Sbjct: 760 tagcc 756
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>dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070O07, full
           insert sequence
          Length = 922

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 349 gtgtcgtagacgatgaagcctgagaacaccag 380
           |||||||||| ||||||||| |||||||||||
Sbjct: 625 gtgtcgtagatgatgaagccggagaacaccag 594
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>gb|BT021132.1| Arabidopsis thaliana At3g63310 gene, complete cds
          Length = 720

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 297 aacagaagcccagatgtactcgtcataagtgtggcgctttatcaagtt 344
           ||||| ||||||||||||||||||||| | ||| | ||| ||||||||
Sbjct: 651 aacagcagcccagatgtactcgtcataggagtgcctcttgatcaagtt 604
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>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6,
              complete sequence
          Length = 148605

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 93     ggcctcatctctggatgatggca 115
              |||||||||||||||||||||||
Sbjct: 134372 ggcctcatctctggatgatggca 134350
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>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence
          Length = 127643

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 93     ggcctcatctctggatgatggca 115
              |||||||||||||||||||||||
Sbjct: 113305 ggcctcatctctggatgatggca 113283
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>emb|BX825703.1|CNS0A67U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL57ZF05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 998

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 297 aacagaagcccagatgtactcgtcata 323
           ||||| |||||||||||||||||||||
Sbjct: 769 aacagcagcccagatgtactcgtcata 743
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>gb|AY110080.1| Zea mays CL3663_1 mRNA sequence
          Length = 765

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 349 gtgtcgtagacgatgaagcctgagaacacca 379
           ||||| |||||||||||||| ||||||||||
Sbjct: 442 gtgtcatagacgatgaagcccgagaacacca 412
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>gb|BT014369.1| Lycopersicon esculentum clone 133657R, mRNA sequence
          Length = 1241

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 298 acagaagcccagatgtactcgtcataagtgtggcgctt 335
           |||| ||||||||||||||| || ||||||| ||||||
Sbjct: 680 acagcagcccagatgtactcatcgtaagtgtagcgctt 643
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>gb|BT014225.1| Lycopersicon esculentum clone 133420R, mRNA sequence
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 303 agcccagatgtactcgtcataagtgt 328
           ||||||||||||||| ||||||||||
Sbjct: 729 agcccagatgtactcatcataagtgt 704
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>gb|AC159332.11| Mus musculus 6 BAC RP23-413D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208808

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     gtactttggcctcatctctgga 107
              ||||||||||||||||||||||
Sbjct: 115436 gtactttggcctcatctctgga 115415
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>ref|NM_001016838.2| Xenopus tropicalis hypothetical protein LOC549592 (LOC549592), mRNA
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 603 tgcacaagccacaccaatgctgaag 627
           |||| ||||||||||||||||||||
Sbjct: 662 tgcagaagccacaccaatgctgaag 686
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>ref|XM_389598.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09422.1)
           partial mRNA
          Length = 831

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 265 aggaacaggttgaggatgtcgaggtaaag 293
           ||||| ||||||| |||||||||||||||
Sbjct: 791 aggaagaggttgatgatgtcgaggtaaag 763
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>gb|DQ397838.1| Cenarchaeum symbiosum clone C03H05, complete sequence
          Length = 39721

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 282   gtcgaggtaaagttcaacaga 302
             |||||||||||||||||||||
Sbjct: 32776 gtcgaggtaaagttcaacaga 32796
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>dbj|AB194635.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#2
          Length = 864

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 ggatggtgaggaacaggttga 277
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
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>dbj|AB194634.1| Leek yellow stripe virus gene for coat protein, partial cds,
           isolate: Korea:Import.#1
          Length = 864

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 ggatggtgaggaacaggttga 277
           |||||||||||||||||||||
Sbjct: 468 ggatggtgaggaacaggttga 488
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>gb|AC007156.2|AC007156 Homo sapiens chromosome 18, clone hRPK.419_J_16, complete sequence
          Length = 203591

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 92     tggcctcatctctggatgatg 112
              |||||||||||||||||||||
Sbjct: 154447 tggcctcatctctggatgatg 154427
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>emb|CR855480.2| Xenopus tropicalis finished cDNA, clone TNeu095j18
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 603 tgcacaagccacaccaatgctgaag 627
           |||| ||||||||||||||||||||
Sbjct: 662 tgcagaagccacaccaatgctgaag 686
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>dbj|AP005271.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-752I5, complete
              sequence
          Length = 200108

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     tggcctcatctctggatgatg 112
              |||||||||||||||||||||
Sbjct: 116968 tggcctcatctctggatgatg 116988


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,887,260
Number of Sequences: 3902068
Number of extensions: 5887260
Number of successful extensions: 120630
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120466
Number of HSP's gapped (non-prelim): 158
length of query: 735
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 712
effective length of database: 17,143,297,704
effective search space: 12206027965248
effective search space used: 12206027965248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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