ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags14e15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103743.1| Zea mays PCO080586 mRNA sequence Length = 1852 Score = 640 bits (323), Expect = e-180 Identities = 473/523 (90%) Strand = Plus / Plus Query: 25 gtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttggggaga 84 |||| ||| ||||||||||||| ||||||||||||||||| |||||||| ||||| |||| Sbjct: 960 gtggttttcggattcagtgcaacaaatgggctatcatagtgaggctgctgcttggagaga 1019 Query: 85 tcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccatattttg 144 | || ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| Sbjct: 1020 ttcctgagaggactgttttcatgcagaaaggaatgaagaaagctctgataccttattttg 1079 Query: 145 agcttacaaatgctgtcaggattggcgatttggaactgtttagagctgttgcagacaaat 204 |||| ||||||||||||||| |||| || | |||||||| || |||||||||||||||| Sbjct: 1080 agctcacaaatgctgtcagggttggggaccttgaactgttcagggctgttgcagacaaat 1139 Query: 205 ttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgccacaatg 264 |||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 1140 ttgcaagcacattcagcgcagacaggactcgcaacttgattgtgaggctgcgccacaatg 1199 Query: 265 tcattcgaactggactacgcaacatcagcatttcatactcgcggatctcccttgctgata 324 |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 1200 tcattcgaactggactgcgcaacatcagcatttcttactcaaggatctcccttgctgaca 1259 Query: 325 ttgcgaagaagctaaggctagacactgggaatcctgttgccgatgcggagtgcattgtag 384 |||| ||||||||||| |||||| ||| ||| |||||||| ||||||||| ||||||||| Sbjct: 1260 ttgctaagaagctaagactagactctgagaaccctgttgctgatgcggagagcattgtag 1319 Query: 385 ccaaggccataagagatggtgctattgatgccaccatagaccatgcaaatggctggatgg 444 ||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1320 ccaaggccataagagatggcgcaattgacgccaccatagatcatgcaaatggctggatgg 1379 Query: 445 tgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattcaactcca 504 | ||||| ||||| |||||||||||||| |||||||| || || |||||||||||||| Sbjct: 1380 tatcgaaggaaaccggtgatgtctactctacaaatgagccacaaattgcattcaactcca 1439 Query: 505 ggattgcgttctgcctcaacatgcataatgaagcggtcaaggc 547 ||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1440 ggattgcgttctgcctcaacatgcacaatgaggcggtcaaggc 1482
>gb|AF479041.1| Triticum aestivum regulatory particle mon-ATPase subunit 3 mRNA, partial cds Length = 480 Score = 618 bits (312), Expect = e-174 Identities = 345/356 (96%) Strand = Plus / Plus Query: 192 gttgcagacaaatttgcaagcacattcagtgcagacaggactcacaatttgattgtgagg 251 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4 gttgcagacaaatttgcgagcaccttcagtgcagacaggactcacaatttgattgtgagg 63 Query: 252 ctccgccacaatgtcattcgaactggactacgcaacatcagcatttcatactcgcggatc 311 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 cttcgccacaatgtcattcgaactggactacgcaacatcagcatttcatactcgcggatc 123 Query: 312 tcccttgctgatattgcgaagaagctaaggctagacactgggaatcctgttgccgatgcg 371 || ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124 tctcttgctgatattgcgaagaagctaaggctagacactgagaatcctgttgctgatgcg 183 Query: 372 gagtgcattgtagccaaggccataagagatggtgctattgatgccaccatagaccatgca 431 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 184 gagtgcatcgtagccaaggccataagagatggtgcaattgatgccaccatagaccatgca 243 Query: 432 aatggctggatggtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggct 491 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 244 aatggctggatggtgtcgaaagaaactggtgatgtctactcgacaaatgaaccccaggct 303 Query: 492 gcattcaactccaggattgcgttctgcctcaacatgcataatgaagcggtcaaggc 547 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 304 gcattcaactccagaattgctttctgcctcaacatgcataatgaagcggtcaaggc 359
>gb|BT016664.1| Zea mays clone Contig497 mRNA sequence Length = 1385 Score = 603 bits (304), Expect = e-169 Identities = 469/524 (89%) Strand = Plus / Plus Query: 24 cgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttggggag 83 ||||| ||| |||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 573 cgtggttttcggatccagtgcaacaaatgggctatcatagtgaggctgctgcttggtgag 632 Query: 84 atcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccatatttt 143 || |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 633 attccagagaggactgttttcatgcagaaaggaatgaagaaagctctgacaccttatttt 692 Query: 144 gagcttacaaatgctgtcaggattggcgatttggaactgtttagagctgttgcagacaaa 203 ||||| ||||||||||||||| |||| || | |||||||| || |||| || |||||| Sbjct: 693 gagctcacaaatgctgtcagggttggggaccttgaactgttcaggactgtcgctgacaaa 752 Query: 204 tttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgccacaat 263 ||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 753 tttgcaagcacattcagcgcagacaggactcgcaacttgattgtgaggctgcgccacaat 812 Query: 264 gtcattcgaactggactacgcaacatcagcatttcatactcgcggatctcccttgctgat 323 ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 813 gtcattcgaactggactgcgcaacatcagcatttcttactcaaggatctcccttgctgac 872 Query: 324 attgcgaagaagctaaggctagacactgggaatcctgttgccgatgcggagtgcattgta 383 ||||| ||||||||||| || ||| ||| ||| |||||||| ||||| ||| |||||||| Sbjct: 873 attgctaagaagctaagactggactctgagaaccctgttgctgatgcagagagcattgta 932 Query: 384 gccaaggccataagagatggtgctattgatgccaccatagaccatgcaaatggctggatg 443 |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 933 gccaaggccataagagatggcgcaattgacgccaccatagatcatgcaaatggctggatg 992 Query: 444 gtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattcaactcc 503 || ||||| |||| |||||||||||||| |||||||| || || ||||||||||||| Sbjct: 993 gtatcgaagaaaaccggtgatgtctactctacaaatgagccacaaattgcattcaactcc 1052 Query: 504 aggattgcgttctgcctcaacatgcataatgaagcggtcaaggc 547 |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1053 aggattgcgttctgcctcaacatgcacaatgaggcggtcaaggc 1096
>ref|XM_483674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 19 cagctcgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttg 78 |||||||||||||| | ||||||||||| ||||||||||| ||||| || || ||||| | Sbjct: 873 cagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcg 932 Query: 79 gggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccat 138 | ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 933 gagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccct 992 Query: 139 attttgagcttacaaatgctgtcaggattggcgatttggaactgtttagagctgttgcag 198 | || ||||||||||||||||||||||| || ||| | ||| ||||||| ||||| || | Sbjct: 993 acttcgagcttacaaatgctgtcaggatcggtgatcttgaattgtttagggctgtcgccg 1052 Query: 199 acaaatttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgcc 258 ||||||||| ||||| || ||||| |||||||||| ||||||||||||||| | |||| Sbjct: 1053 acaaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgagattgcgcc 1112 Query: 259 acaatgtcattcgaactggactacgcaacatcagcatttcatactcgcggatctcccttg 318 ||||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||||| Sbjct: 1113 acaatgttattcgaaccggactgcgcaatattagcatttcatactcacggatctcccttg 1172 Query: 319 ctgatattgcgaagaagctaaggctagacactgggaatcctgttgccgatgcggagtgca 378 |||||||||| |||||||||||||| ||| ||| ||||||||||| ||||||||| ||| Sbjct: 1173 ctgatattgccaagaagctaaggctcgactctgataatcctgttgctgatgcggagagca 1232 Query: 379 ttgtagccaaggccataagagatggtgctattgatgccaccatagaccatgcaaatggct 438 ||||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||| Sbjct: 1233 ttgtagccaaggcaataagggatggcgcaattgatgccaccatagatcatgccaacggct 1292 Query: 439 ggatggtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattca 498 |||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||| Sbjct: 1293 ggatggtgtcgaaagaaactggcgatgtctactcgacaaatgaaccacagattgcattca 1352 Query: 499 actccaggattgcgttctgcctcaacatgcataatgaagc 538 |||| ||||||| || |||||||||||||| |||||||| Sbjct: 1353 actctcggattgcattttgcctcaacatgcacaatgaagc 1392
>dbj|AK061287.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H08, full insert sequence Length = 1694 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 19 cagctcgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttg 78 |||||||||||||| | ||||||||||| ||||||||||| ||||| || || ||||| | Sbjct: 873 cagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcg 932 Query: 79 gggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccat 138 | ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 933 gagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccct 992 Query: 139 attttgagcttacaaatgctgtcaggattggcgatttggaactgtttagagctgttgcag 198 | || ||||||||||||||||||||||| || ||| | ||| ||||||| ||||| || | Sbjct: 993 acttcgagcttacaaatgctgtcaggatcggtgatcttgaattgtttagggctgtcgccg 1052 Query: 199 acaaatttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgcc 258 ||||||||| ||||| || ||||| |||||||||| ||||||||||||||| | |||| Sbjct: 1053 acaaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgagattgcgcc 1112 Query: 259 acaatgtcattcgaactggactacgcaacatcagcatttcatactcgcggatctcccttg 318 ||||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||||| Sbjct: 1113 acaatgttattcgaaccggactgcgcaatattagcatttcatactcacggatctcccttg 1172 Query: 319 ctgatattgcgaagaagctaaggctagacactgggaatcctgttgccgatgcggagtgca 378 |||||||||| |||||||||||||| ||| ||| ||||||||||| ||||||||| ||| Sbjct: 1173 ctgatattgccaagaagctaaggctcgactctgataatcctgttgctgatgcggagagca 1232 Query: 379 ttgtagccaaggccataagagatggtgctattgatgccaccatagaccatgcaaatggct 438 ||||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||| Sbjct: 1233 ttgtagccaaggcaataagggatggcgcaattgatgccaccatagatcatgccaacggct 1292 Query: 439 ggatggtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattca 498 |||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||| Sbjct: 1293 ggatggtgtcgaaagaaactggcgatgtctactcgacaaatgaaccacagattgcattca 1352 Query: 499 actccaggattgcgttctgcctcaacatgcataatgaagc 538 |||| ||||||| || |||||||||||||| |||||||| Sbjct: 1353 actctcggattgcattttgcctcaacatgcacaatgaagc 1392
>dbj|AB070258.1| Oryza sativa (japonica cultivar-group) OsRPN3 mRNA for 26S proteasome regulatory particle non-ATPase subunit3, partial cds Length = 1458 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 19 cagctcgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttg 78 |||||||||||||| | ||||||||||| ||||||||||| ||||| || || ||||| | Sbjct: 611 cagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcg 670 Query: 79 gggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccat 138 | ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 671 gagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccct 730 Query: 139 attttgagcttacaaatgctgtcaggattggcgatttggaactgtttagagctgttgcag 198 | || ||||||||||||||||||||||| || ||| | ||| ||||||| ||||| || | Sbjct: 731 acttcgagcttacaaatgctgtcaggatcggtgatcttgaattgtttagggctgtcgccg 790 Query: 199 acaaatttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgcc 258 ||||||||| ||||| || ||||| |||||||||| ||||||||||||||| | |||| Sbjct: 791 acaaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgagattgcgcc 850 Query: 259 acaatgtcattcgaactggactacgcaacatcagcatttcatactcgcggatctcccttg 318 ||||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||||| Sbjct: 851 acaatgttattcgaaccggactgcgcaatattagcatttcatactcacggatctcccttg 910 Query: 319 ctgatattgcgaagaagctaaggctagacactgggaatcctgttgccgatgcggagtgca 378 |||||||||| |||||||||||||| ||| ||| ||||||||||| ||||||||| ||| Sbjct: 911 ctgatattgccaagaagctaaggctcgactctgataatcctgttgctgatgcggagagca 970 Query: 379 ttgtagccaaggccataagagatggtgctattgatgccaccatagaccatgcaaatggct 438 ||||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||| Sbjct: 971 ttgtagccaaggcaataagggatggcgcaattgatgccaccatagatcatgccaacggct 1030 Query: 439 ggatggtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattca 498 |||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||| Sbjct: 1031 ggatggtgtcgaaagaaactggcgatgtctactcgacaaatgaaccacagattgcattca 1090 Query: 499 actccaggattgcgttctgcctcaacatgcataatgaagc 538 |||| ||||||| || |||||||||||||| |||||||| Sbjct: 1091 actctcggattgcattttgcctcaacatgcacaatgaagc 1130
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 387 bits (195), Expect = e-104 Identities = 336/383 (87%) Strand = Plus / Minus Query: 156 gctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcaca 215 ||||||||||| || ||| | ||| ||||||| ||||| || |||||||||| ||||| Sbjct: 27581978 gctgtcaggatcggtgatcttgaattgtttagggctgtcgccgacaaatttgtgagcact 27581919 Query: 216 ttcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaact 275 || ||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||| Sbjct: 27581918 tttagtgctgacaggactcgcaatttgattgtgagattgcgccacaatgttattcgaacc 27581859 Query: 276 ggactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaag 335 ||||| ||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 27581858 ggactgcgcaatattagcatttcatactcacggatctcccttgctgatattgccaagaag 27581799 Query: 336 ctaaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccata 395 |||||||| ||| ||| ||||||||||| ||||||||| |||||||||||||||| ||| Sbjct: 27581798 ctaaggctcgactctgataatcctgttgctgatgcggagagcattgtagccaaggcaata 27581739 Query: 396 agagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaa 455 || ||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 27581738 agggatggcgcaattgatgccaccatagatcatgccaacggctggatggtgtcgaaagaa 27581679 Query: 456 actggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttc 515 ||||| ||||||||||| ||||||||||| ||| |||||||||||| ||||||| || Sbjct: 27581678 actggcgatgtctactcgacaaatgaaccacagattgcattcaactctcggattgcattt 27581619 Query: 516 tgcctcaacatgcataatgaagc 538 |||||||||||||| |||||||| Sbjct: 27581618 tgcctcaacatgcacaatgaagc 27581596 Score = 147 bits (74), Expect = 4e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 19 cagctcgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttg 78 |||||||||||||| | ||||||||||| ||||||||||| ||||| || || ||||| | Sbjct: 27582190 cagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcg 27582131 Query: 79 gggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccat 138 | ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 27582130 gagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccct 27582071 Query: 139 attttgagcttacaaatg 156 | || ||||||||||||| Sbjct: 27582070 acttcgagcttacaaatg 27582053
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 387 bits (195), Expect = e-104 Identities = 336/383 (87%) Strand = Plus / Minus Query: 156 gctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcaca 215 ||||||||||| || ||| | ||| ||||||| ||||| || |||||||||| ||||| Sbjct: 64268 gctgtcaggatcggtgatcttgaattgtttagggctgtcgccgacaaatttgtgagcact 64209 Query: 216 ttcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaact 275 || ||||| |||||||||| ||||||||||||||| | ||||||||||| |||||||| Sbjct: 64208 tttagtgctgacaggactcgcaatttgattgtgagattgcgccacaatgttattcgaacc 64149 Query: 276 ggactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaag 335 ||||| ||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 64148 ggactgcgcaatattagcatttcatactcacggatctcccttgctgatattgccaagaag 64089 Query: 336 ctaaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccata 395 |||||||| ||| ||| ||||||||||| ||||||||| |||||||||||||||| ||| Sbjct: 64088 ctaaggctcgactctgataatcctgttgctgatgcggagagcattgtagccaaggcaata 64029 Query: 396 agagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaa 455 || ||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 64028 agggatggcgcaattgatgccaccatagatcatgccaacggctggatggtgtcgaaagaa 63969 Query: 456 actggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttc 515 ||||| ||||||||||| ||||||||||| ||| |||||||||||| ||||||| || Sbjct: 63968 actggcgatgtctactcgacaaatgaaccacagattgcattcaactctcggattgcattt 63909 Query: 516 tgcctcaacatgcataatgaagc 538 |||||||||||||| |||||||| Sbjct: 63908 tgcctcaacatgcacaatgaagc 63886 Score = 147 bits (74), Expect = 4e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 19 cagctcgtggctttaggattcagtgcaataaatgggctatcatagtaaggctgcttcttg 78 |||||||||||||| | ||||||||||| ||||||||||| ||||| || || ||||| | Sbjct: 64480 cagctcgtggctttcgtattcagtgcaacaaatgggctattatagtgagactacttctcg 64421 Query: 79 gggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccat 138 | ||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 64420 gagagattccagagaggactgtgttcatgcagaagggaatgaaggaagcactgacaccct 64361 Query: 139 attttgagcttacaaatg 156 | || ||||||||||||| Sbjct: 64360 acttcgagcttacaaatg 64343
>dbj|AK101536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E17, full insert sequence Length = 1827 Score = 341 bits (172), Expect = 1e-90 Identities = 424/508 (83%) Strand = Plus / Plus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 946 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 1005 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 1006 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 1065 Query: 157 ctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcacat 216 |||| | |||| || | ||| |||| ||||| || ||||| |||||||| ||||| | Sbjct: 1066 ctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactt 1125 Query: 217 tcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactg 276 |||| || || ||||| | ||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 1126 tcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactg 1185 Query: 277 gactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaagc 336 || | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1186 gattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagc 1245 Query: 337 taaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccataa 396 | ||| | ||| | | ||| |||||||| ||||| || | ||||||||||| || || | Sbjct: 1246 tgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatca 1305 Query: 397 gagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaaa 456 | ||||| || |||||||||||||| || ||||| ||||| ||||||||||| ||||| | Sbjct: 1306 gggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagaga 1365 Query: 457 ctggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttct 516 ||||||||||||||||||| ||||| || ||| ||| ||||| || |||||||| || | Sbjct: 1366 ctggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcatttt 1425 Query: 517 gcctcaacatgcataatgaagcggtcaa 544 || | |||||||| || ||||||||||| Sbjct: 1426 gcttgaacatgcacaacgaagcggtcaa 1453
>dbj|AK100985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D07, full insert sequence Length = 1824 Score = 341 bits (172), Expect = 1e-90 Identities = 424/508 (83%) Strand = Plus / Plus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 908 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 967 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 968 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 1027 Query: 157 ctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcacat 216 |||| | |||| || | ||| |||| ||||| || ||||| |||||||| ||||| | Sbjct: 1028 ctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactt 1087 Query: 217 tcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactg 276 |||| || || ||||| | ||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 1088 tcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactg 1147 Query: 277 gactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaagc 336 || | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1148 gattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagc 1207 Query: 337 taaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccataa 396 | ||| | ||| | | ||| |||||||| ||||| || | ||||||||||| || || | Sbjct: 1208 tgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatca 1267 Query: 397 gagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaaa 456 | ||||| || |||||||||||||| || ||||| ||||| ||||||||||| ||||| | Sbjct: 1268 gggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagaga 1327 Query: 457 ctggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttct 516 ||||||||||||||||||| ||||| || ||| ||| ||||| || |||||||| || | Sbjct: 1328 ctggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcatttt 1387 Query: 517 gcctcaacatgcataatgaagcggtcaa 544 || | |||||||| || ||||||||||| Sbjct: 1388 gcttgaacatgcacaacgaagcggtcaa 1415
>dbj|AK059017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A11, full insert sequence Length = 1019 Score = 341 bits (172), Expect = 1e-90 Identities = 424/508 (83%) Strand = Plus / Plus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 240 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 299 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 300 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 359 Query: 157 ctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcacat 216 |||| | |||| || | ||| |||| ||||| || ||||| |||||||| ||||| | Sbjct: 360 ctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactt 419 Query: 217 tcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactg 276 |||| || || ||||| | ||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 420 tcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactg 479 Query: 277 gactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaagc 336 || | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 480 gattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagc 539 Query: 337 taaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccataa 396 | ||| | ||| | | ||| |||||||| ||||| || | ||||||||||| || || | Sbjct: 540 tgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatca 599 Query: 397 gagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaaa 456 | ||||| || |||||||||||||| || ||||| ||||| ||||||||||| ||||| | Sbjct: 600 gggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagaga 659 Query: 457 ctggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttct 516 ||||||||||||||||||| ||||| || ||| ||| ||||| || |||||||| || | Sbjct: 660 ctggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcatttt 719 Query: 517 gcctcaacatgcataatgaagcggtcaa 544 || | |||||||| || ||||||||||| Sbjct: 720 gcttgaacatgcacaacgaagcggtcaa 747
>dbj|AB031299.1| Oryza sativa (japonica cultivar-group) Os21D7 mRNA, complete cds Length = 1776 Score = 341 bits (172), Expect = 1e-90 Identities = 424/508 (83%) Strand = Plus / Plus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 881 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 940 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 941 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 1000 Query: 157 ctgtcaggattggcgatttggaactgtttagagctgttgcagacaaatttgcaagcacat 216 |||| | |||| || | ||| |||| ||||| || ||||| |||||||| ||||| | Sbjct: 1001 ctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactt 1060 Query: 217 tcagtgcagacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactg 276 |||| || || ||||| | ||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 1061 tcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactg 1120 Query: 277 gactacgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaagc 336 || | |||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1121 gattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagc 1180 Query: 337 taaggctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccataa 396 | ||| | ||| | | ||| |||||||| ||||| || | ||||||||||| || || | Sbjct: 1181 tgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatca 1240 Query: 397 gagatggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaaa 456 | ||||| || |||||||||||||| || ||||| ||||| ||||||||||| ||||| | Sbjct: 1241 gggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagaga 1300 Query: 457 ctggtgatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttct 516 ||||||||||||||||||| ||||| || ||| ||| ||||| || |||||||| || | Sbjct: 1301 ctggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcatttt 1360 Query: 517 gcctcaacatgcataatgaagcggtcaa 544 || | |||||||| || ||||||||||| Sbjct: 1361 gcttgaacatgcacaacgaagcggtcaa 1388
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 262 bits (132), Expect = 1e-66 Identities = 306/364 (84%) Strand = Plus / Minus Query: 181 tgtttagagctgttgcagacaaatttgcaagcacattcagtgcagacaggactcacaatt 240 |||| ||||| || ||||| |||||||| ||||| ||||| || || ||||| | ||||| Sbjct: 21038185 tgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaatt 21038126 Query: 241 tgattgtgaggctccgccacaatgtcattcgaactggactacgcaacatcagcatttcat 300 |||| |||||||| ||||||||||||||||| |||||| | |||||||| |||||||||| Sbjct: 21038125 tgatagtgaggctgcgccacaatgtcattcggactggattgcgcaacataagcatttcat 21038066 Query: 301 actcgcggatctcccttgctgatattgcgaagaagctaaggctagacactgggaatcctg 360 |||| ||||||||||||||||| ||||| |||||||| ||| | ||| | | ||| |||| Sbjct: 21038065 actcacggatctcccttgctgacattgccaagaagctgaggttggactcagagaaccctg 21038006 Query: 361 ttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgccacca 420 |||| ||||| || | ||||||||||| || || || ||||| || ||||||||||||| Sbjct: 21038005 ttgctgatgctgaaagtattgtagccaaagcaatcagggatggggcaattgatgccacca 21037946 Query: 421 tagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaacaaatg 480 | || ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 21037945 ttgatcatgccaatggttggatggtgtcaaaagagactggtgatgtctactcaacgaatg 21037886 Query: 481 aaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaagcgg 540 | || ||| ||| ||||| || |||||||| || ||| | |||||||| || ||||||| Sbjct: 21037885 agccacagattgctttcaattcaaggattgcattttgcttgaacatgcacaacgaagcgg 21037826 Query: 541 tcaa 544 |||| Sbjct: 21037825 tcaa 21037822 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 21038411 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 21038352 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 21038351 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 21038292
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 262 bits (132), Expect = 1e-66 Identities = 306/364 (84%) Strand = Plus / Minus Query: 181 tgtttagagctgttgcagacaaatttgcaagcacattcagtgcagacaggactcacaatt 240 |||| ||||| || ||||| |||||||| ||||| ||||| || || ||||| | ||||| Sbjct: 130274 tgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaatt 130215 Query: 241 tgattgtgaggctccgccacaatgtcattcgaactggactacgcaacatcagcatttcat 300 |||| |||||||| ||||||||||||||||| |||||| | |||||||| |||||||||| Sbjct: 130214 tgatagtgaggctgcgccacaatgtcattcggactggattgcgcaacataagcatttcat 130155 Query: 301 actcgcggatctcccttgctgatattgcgaagaagctaaggctagacactgggaatcctg 360 |||| ||||||||||||||||| ||||| |||||||| ||| | ||| | | ||| |||| Sbjct: 130154 actcacggatctcccttgctgacattgccaagaagctgaggttggactcagagaaccctg 130095 Query: 361 ttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgccacca 420 |||| ||||| || | ||||||||||| || || || ||||| || ||||||||||||| Sbjct: 130094 ttgctgatgctgaaagtattgtagccaaagcaatcagggatggggcaattgatgccacca 130035 Query: 421 tagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaacaaatg 480 | || ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 130034 ttgatcatgccaatggttggatggtgtcaaaagagactggtgatgtctactcaacgaatg 129975 Query: 481 aaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaagcgg 540 | || ||| ||| ||||| || |||||||| || ||| | |||||||| || ||||||| Sbjct: 129974 agccacagattgctttcaattcaaggattgcattttgcttgaacatgcacaacgaagcgg 129915 Query: 541 tcaa 544 |||| Sbjct: 129914 tcaa 129911 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 130500 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 130441 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 130440 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 130381
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 262 bits (132), Expect = 1e-66 Identities = 306/364 (84%) Strand = Plus / Minus Query: 181 tgtttagagctgttgcagacaaatttgcaagcacattcagtgcagacaggactcacaatt 240 |||| ||||| || ||||| |||||||| ||||| ||||| || || ||||| | ||||| Sbjct: 59485 tgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaatt 59426 Query: 241 tgattgtgaggctccgccacaatgtcattcgaactggactacgcaacatcagcatttcat 300 |||| |||||||| ||||||||||||||||| |||||| | |||||||| |||||||||| Sbjct: 59425 tgatagtgaggctgcgccacaatgtcattcggactggattgcgcaacataagcatttcat 59366 Query: 301 actcgcggatctcccttgctgatattgcgaagaagctaaggctagacactgggaatcctg 360 |||| ||||||||||||||||| ||||| |||||||| ||| | ||| | | ||| |||| Sbjct: 59365 actcacggatctcccttgctgacattgccaagaagctgaggttggactcagagaaccctg 59306 Query: 361 ttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgccacca 420 |||| ||||| || | ||||||||||| || || || ||||| || ||||||||||||| Sbjct: 59305 ttgctgatgctgaaagtattgtagccaaagcaatcagggatggggcaattgatgccacca 59246 Query: 421 tagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaacaaatg 480 | || ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 59245 ttgatcatgccaatggttggatggtgtcaaaagagactggtgatgtctactcaacgaatg 59186 Query: 481 aaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaagcgg 540 | || ||| ||| ||||| || |||||||| || ||| | |||||||| || ||||||| Sbjct: 59185 agccacagattgctttcaattcaaggattgcattttgcttgaacatgcacaacgaagcgg 59126 Query: 541 tcaa 544 |||| Sbjct: 59125 tcaa 59122 Score = 103 bits (52), Expect = 6e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 37 ttcagtgcaataaatgggctatcatagtaaggctgcttcttggggagatcccagagagga 96 |||||||||| || |||||||||||||| || | ||| | || || || |||||||| | Sbjct: 59711 ttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaa 59652 Query: 97 ctgttttcatgcagaaaggaatgaaggaagctctgacaccatattttgagcttacaaatg 156 ||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct: 59651 ctgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatg 59592
>gb|AF100332.1|AF100332 Dendrobium grex Madame Thong-IN putative 21D7 protein (ovg29) mRNA, partial cds Length = 765 Score = 163 bits (82), Expect = 7e-37 Identities = 220/266 (82%) Strand = Plus / Plus Query: 282 cgcaacatcagcatttcatactcgcggatctcccttgctgatattgcgaagaagctaagg 341 ||||||||||| ||||||||||| || || || ||| | || ||||||||||||| ||| Sbjct: 179 cgcaacatcagtatttcatactcccgaatttctctttccgacgttgcgaagaagctgagg 238 Query: 342 ctagacactgggaatcctgttgccgatgcggagtgcattgtagccaaggccataagagat 401 ||||| ||| || ||||| |||||||| ||| ||||||||||||||||||| |||| Sbjct: 239 ttagactctgacaaccctgtcgccgatgccgagagcattgtagccaaggccatccgagac 298 Query: 402 ggtgctattgatgccaccatagaccatgcaaatggctggatggtgtcgaaagaaactggt 461 || || |||||||| || || || ||||| ||||| |||||| | ||||||||||| ||| Sbjct: 299 ggcgccattgatgcaacgattgatcatgccaatggatggatgatatcgaaagaaaccggt 358 Query: 462 gatgtctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctc 521 || ||||||| |||||||| || ||| ||| ||| | ||||| ||||| |||||||| Sbjct: 359 gacatctactccacaaatgagcctcagcttgctttccattccagaattgcattctgccta 418 Query: 522 aacatgcataatgaagcggtcaaggc 547 ||||||||||||||||| |||||||| Sbjct: 419 aacatgcataatgaagcagtcaaggc 444
>dbj|D13434.1|DAR21D7A Daucus carota mRNA for 21D7 antigen, complete cds Length = 1816 Score = 121 bits (61), Expect = 3e-24 Identities = 154/185 (83%) Strand = Plus / Plus Query: 354 aatcctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgat 413 ||||||||||| ||||| || | |||||| ||||||| ||||| ||||| || ||||| Sbjct: 1182 aatcctgttgctgatgctgaaagtattgtatccaaggcaataagggatggagccattgac 1241 Query: 414 gccaccatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactca 473 |||||||| || ||||||||||| ||||||||||| || ||||| || || | |||||| Sbjct: 1242 gccaccatcgatcatgcaaatgggtggatggtgtcaaaggaaaccggagacatttactca 1301 Query: 474 acaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataat 533 |||||||| || || || || || || |||||||| ||||| ||||| |||||||||||| Sbjct: 1302 acaaatgagccacaagcagcttttaattccaggatagcgttttgccttaacatgcataat 1361 Query: 534 gaagc 538 ||||| Sbjct: 1362 gaagc 1366 Score = 107 bits (54), Expect = 4e-20 Identities = 182/222 (81%), Gaps = 2/222 (0%) Strand = Plus / Plus Query: 84 atcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgacaccatatttt 143 ||||||||| |||||||||| |||||||| |||||| | |||| ||| || || ||| Sbjct: 912 atcccagagcggactgtttttatgcagaagggaatggaaaaagcattgaggccgtacttt 971 Query: 144 gagcttacaaatgctgtcaggattggcgatttggaactgtttagagct-gttgcagacaa 202 || |||||||||||||| | ||||| ||| |||| || ||||||||| || || ||||| Sbjct: 972 ga-cttacaaatgctgtacgaattggggatctggagctctttagagctcgtggctgacaa 1030 Query: 203 atttgcaagcacattcagtgcagacaggactcacaatttgattgtgaggctccgccacaa 262 || || |||||||||| ||||||| |||| || ||| ||||||| ||||| || || || Sbjct: 1031 gttcgctagcacattcactgcagaccggacccataatctgattgtcaggcttcgtcataa 1090 Query: 263 tgtcattcgaactggactacgcaacatcagcatttcatactc 304 |||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 1091 tgtcataagaactgggcttcgcaacatcagtatttcatactc 1132
>dbj|AB001422.1| Nicotiana tabacum mRNA for 21D7, complete cds Length = 1718 Score = 81.8 bits (41), Expect = 2e-12 Identities = 236/301 (78%) Strand = Plus / Plus Query: 235 acaatttgattgtgaggctccgccacaatgtcattcgaactggactacgcaacatcagca 294 |||||||||||||||| ||||| || ||||||||| | ||||| ||||| |||||||| | Sbjct: 1081 acaatttgattgtgagactccgacataatgtcattaggactgggctacgaaacatcagta 1140 Query: 295 tttcatactcgcggatctcccttgctgatattgcgaagaagctaaggctagacactggga 354 | |||||||| || ||||| || | |||| |||| || ||||| ||| | || || | Sbjct: 1141 tctcatactctcgaatctcgctggttgatgttgcaaaaaagctgaggttggattctccaa 1200 Query: 355 atcctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatg 414 | |||||||| ||||| ||| | || || |||| || || |||||||||| ||||||| Sbjct: 1201 accctgttgctgatgctgagagtatcgtgtccaaagcaattcgagatggtgcaattgatg 1260 Query: 415 ccaccatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaa 474 | || | || ||||| ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 1261 cgacgttggatcatgcgaatggatggatggtatcaaaggagactggtgacatctactcta 1320 Query: 475 caaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatg 534 ||||||| || || ||| || ||||| || ||||| ||||| || || |||||||||| Sbjct: 1321 caaatgagcctcaaattgcttttaactcgagaattgccttctgtctgaatatgcataatg 1380 Query: 535 a 535 | Sbjct: 1381 a 1381 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 75 cttggggagatcccagagaggactgttttcatgcagaaaggaatgaaggaagctctgaca 134 ||||| ||||| ||||| ||||||||||| ||||||||||| ||| || |||| | | Sbjct: 921 cttggagagattccagaaaggactgtttttatgcagaaaggcatggagaaagcattaagg 980 Query: 135 ccatattttgagcttacaaatgctgt 160 ||||| |||||||| ||||||||||| Sbjct: 981 ccatactttgagctgacaaatgctgt 1006
>ref|NM_101873.2| Arabidopsis thaliana EMB2719 AT1G20200 (EMB2719) mRNA, complete cds Length = 1804 Score = 69.9 bits (35), Expect = 8e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 357 cctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgcc 416 ||||| || |||||||| |||| || || ||||||||| | || || ||||||||||| Sbjct: 1285 cctgtggctgatgcggaaagcatcgtggcaaaggccatacgcgacggagctattgatgct 1344 Query: 417 accatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaaca 476 || || || || ||| || || ||||| || ||||||||||| || ||||||| || Sbjct: 1345 acaatcgatcacaaaaacggatgcatggtctccaaagaaactggggacatctactcgacg 1404 Query: 477 aatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaa 536 ||||| || || |||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 1405 aatgagccacaaactgcgttcaactcaagaattgctttctgcctcaacatgcataacgaa 1464 Query: 537 gcggtca 543 || |||| Sbjct: 1465 gctgtca 1471
>gb|AY230831.1| Arabidopsis thaliana 26S proteasome subunit RPN3a (RPN3a) mRNA, complete cds Length = 1476 Score = 69.9 bits (35), Expect = 8e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 357 cctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgcc 416 ||||| || |||||||| |||| || || ||||||||| | || || ||||||||||| Sbjct: 1156 cctgtggctgatgcggaaagcatcgtggcaaaggccatacgcgacggagctattgatgct 1215 Query: 417 accatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaaca 476 || || || || ||| || || ||||| || ||||||||||| || ||||||| || Sbjct: 1216 acaatcgatcacaaaaacggatgcatggtctccaaagaaactggggacatctactcgacg 1275 Query: 477 aatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaa 536 ||||| || || |||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 1276 aatgagccacaaactgcgttcaactcaagaattgctttctgcctcaacatgcataacgaa 1335 Query: 537 gcggtca 543 || |||| Sbjct: 1336 gctgtca 1342
>gb|AY120740.1| Arabidopsis thaliana putative proteasome regulatory subunit S3 (At1g20200) mRNA, complete cds Length = 1736 Score = 69.9 bits (35), Expect = 8e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 357 cctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgcc 416 ||||| || |||||||| |||| || || ||||||||| | || || ||||||||||| Sbjct: 1242 cctgtggctgatgcggaaagcatcgtggcaaaggccatacgcgacggagctattgatgct 1301 Query: 417 accatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaaca 476 || || || || ||| || || ||||| || ||||||||||| || ||||||| || Sbjct: 1302 acaatcgatcacaaaaacggatgcatggtctccaaagaaactggggacatctactcgacg 1361 Query: 477 aatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaa 536 ||||| || || |||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 1362 aatgagccacaaactgcgttcaactcaagaattgctttctgcctcaacatgcataacgaa 1421 Query: 537 gcggtca 543 || |||| Sbjct: 1422 gctgtca 1428
>gb|AY057520.1| Arabidopsis thaliana At1g20200/T20H2_4 mRNA, complete cds Length = 1778 Score = 69.9 bits (35), Expect = 8e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 357 cctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgcc 416 ||||| || |||||||| |||| || || ||||||||| | || || ||||||||||| Sbjct: 1283 cctgtggctgatgcggaaagcatcgtggcaaaggccatacgcgacggagctattgatgct 1342 Query: 417 accatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaaca 476 || || || || ||| || || ||||| || ||||||||||| || ||||||| || Sbjct: 1343 acaatcgatcacaaaaacggatgcatggtctccaaagaaactggggacatctactcgacg 1402 Query: 477 aatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaa 536 ||||| || || |||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 1403 aatgagccacaaactgcgttcaactcaagaattgctttctgcctcaacatgcataacgaa 1462 Query: 537 gcggtca 543 || |||| Sbjct: 1463 gctgtca 1469
>gb|AY088940.1| Arabidopsis thaliana clone 101030 mRNA, complete sequence Length = 1795 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 441 atggtgtcgaaagaaactggtgatgtctactcaacaaatgaaccccaggctgcattcaac 500 ||||| || ||||||||||| || ||||||| || ||||| || || |||| |||||| Sbjct: 1360 atggtctccaaagaaactggggacatctactcgacgaatgagccacaaactgcgttcaac 1419 Query: 501 tccaggattgcgttctgcctcaacatgcataatgaagcggtca 543 || || ||||| |||||||||||||||||||| ||||| |||| Sbjct: 1420 tcaagaattgctttctgcctcaacatgcataacgaagctgtca 1462
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 69.9 bits (35), Expect = 8e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 357 cctgttgccgatgcggagtgcattgtagccaaggccataagagatggtgctattgatgcc 416 ||||| || |||||||| |||| || || ||||||||| | || || ||||||||||| Sbjct: 10216 cctgtggctgatgcggaaagcatcgtggcaaaggccatacgcgacggagctattgatgct 10275 Query: 417 accatagaccatgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaaca 476 || || || || ||| || || ||||| || ||||||||||| || ||||||| || Sbjct: 10276 acaatcgatcacaaaaacggatgcatggtctccaaagaaactggggacatctactcgacg 10335 Query: 477 aatgaaccccaggctgcattcaactccaggattgcgttctgcctcaacatgcataatgaa 536 ||||| || || |||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 10336 aatgagccacaaactgcgttcaactcaagaattgctttctgcctcaacatgcataacgaa 10395 Query: 537 gcggtca 543 || |||| Sbjct: 10396 gctgtca 10402
>ref|NM_106248.2| Arabidopsis thaliana unknown protein AT1G75990 mRNA, complete cds Length = 1646 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 1078 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 1137 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 1138 caacatcagcatttcctactc 1158 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Plus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || ||||| |||||||| ||||| | || | Sbjct: 1320 tctactccactaatgaaccacagactgcgtttaactcgaggattgccttctgtttgaata 1379 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 1380 tgcacaatgaagcggt 1395
>gb|BT015771.1| Arabidopsis thaliana At1g75990 mRNA, complete cds Length = 1464 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 1020 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 1079 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 1080 caacatcagcatttcctactc 1100 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Plus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || ||||| |||||||| ||||| | || | Sbjct: 1262 tctactccactaatgaaccacagactgcgtttaactcgaggattgccttctgtttgaata 1321 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 1322 tgcacaatgaagcggt 1337
>gb|AY057508.1| Arabidopsis thaliana At1g75990/T4O12_21 mRNA, complete cds Length = 1654 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 1078 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 1137 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 1138 caacatcagcatttcctactc 1158 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Plus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || ||||| |||||||| ||||| | || | Sbjct: 1320 tctactccactaatgaaccacagactgcgtttaactcgaggattgccttctgtttgaata 1379 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 1380 tgcacaatgaagcggt 1395
>emb|BX814379.1|CNS0ADJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1247 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 752 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 811 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 812 caacatcagcatttcctactc 832 Score = 40.1 bits (20), Expect = 7.4 Identities = 62/76 (81%) Strand = Plus / Plus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || |||| |||||||| ||||| | || | Sbjct: 994 tctactccactaatgaaccacagactgcgttttactcgaggattgccttctgtttgaata 1053 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 1054 tgcacaatgaagcggt 1069
>emb|BX817112.1|CNS0AAOL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 1059 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 1118 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 1119 caacatcagcatttcctactc 1139 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Plus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || ||||| |||||||| ||||| | || | Sbjct: 1301 tctactccactaatgaaccacagactgcgtttaactcgaggattgccttctgtttgaata 1360 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 1361 tgcacaatgaagcggt 1376
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Minus Query: 224 agacaggactcacaatttgattgtgaggctccgccacaatgtcattcgaactggactacg 283 ||||||||||||||| | || || || ||||| ||||| || || |||| ||||| || Sbjct: 74138 agacaggactcacaacctcatagtcagactccgacacaacgtgatcagaacaggactgcg 74079 Query: 284 caacatcagcatttcatactc 304 ||||||||||||||| ||||| Sbjct: 74078 caacatcagcatttcctactc 74058 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Minus Query: 466 tctactcaacaaatgaaccccaggctgcattcaactccaggattgcgttctgcctcaaca 525 ||||||| || |||||||| ||| |||| || ||||| |||||||| ||||| | || | Sbjct: 73896 tctactccactaatgaaccacagactgcgtttaactcgaggattgccttctgtttgaata 73837 Query: 526 tgcataatgaagcggt 541 |||| ||||||||||| Sbjct: 73836 tgcacaatgaagcggt 73821
>emb|BX815258.1|CNS0ADZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1732 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 508 ttgcgttctgcctcaacatgcataatgaagcggtca 543 |||| |||||||||||||||||||| ||||| |||| Sbjct: 1359 ttgctttctgcctcaacatgcataacgaagctgtca 1394
>gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosome unknown, complete sequence Length = 229445 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 gttttcatgcagaaaggaatgaa 121 ||||||||||||||||||||||| Sbjct: 13861 gttttcatgcagaaaggaatgaa 13883
>ref|XM_505989.1| Yarrowia lipolytica CLIB122, YALI0F28413g predicted mRNA Length = 1422 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 372 gagtgcattgtagccaaggccataagagatggtgctattgatgccaccat 421 |||| |||||| ||||||||||| ||||||||| ||||| |||||||| Sbjct: 1111 gagtacattgtggccaaggccattcgagatggtgtcattgaagccaccat 1160
>gb|AC055739.23| Homo sapiens 3 BAC RP11-197K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136000 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 aagagatggtgctattgatgcc 416 |||||||||||||||||||||| Sbjct: 9562 aagagatggtgctattgatgcc 9583
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 372 gagtgcattgtagccaaggccataagagatggtgctattgatgccaccat 421 |||| |||||| ||||||||||| ||||||||| ||||| |||||||| Sbjct: 3615140 gagtacattgtggccaaggccattcgagatggtgtcattgaagccaccat 3615189
>ref|NM_001031362.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (PSMD3), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 gatgcggagtgcattgtagccaaggccat 394 |||||||||| |||||| ||||||||||| Sbjct: 1277 gatgcggagttcattgttgccaaggccat 1305
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 caggctgcattcaactccagg 506 ||||||||||||||||||||| Sbjct: 109541 caggctgcattcaactccagg 109561
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 aggctagacactgggaatcctgttg 363 ||||||| ||||||||||||||||| Sbjct: 190081 aggctagtcactgggaatcctgttg 190057
>emb|AJ719445.1| Gallus gallus mRNA for hypothetical protein, clone 2h4 Length = 2025 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 gatgcggagtgcattgtagccaaggccat 394 |||||||||| |||||| ||||||||||| Sbjct: 1277 gatgcggagttcattgttgccaaggccat 1305
>gb|AC114536.18| Mus musculus chromosome 1, clone RP23-42M9, complete sequence Length = 193978 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tattttgagcttacaaatgc 157 |||||||||||||||||||| Sbjct: 168967 tattttgagcttacaaatgc 168986
>gb|AC162169.4| Mus musculus chromosome 1, clone RP24-268D20, complete sequence Length = 158792 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tattttgagcttacaaatgc 157 |||||||||||||||||||| Sbjct: 65304 tattttgagcttacaaatgc 65323
>emb|BX547934.18| Zebrafish DNA sequence from clone DKEY-161J23 in linkage group 24, complete sequence Length = 174457 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aggactcacaatttgattgt 247 |||||||||||||||||||| Sbjct: 81872 aggactcacaatttgattgt 81853
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 40.1 bits (20), Expect = 7.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 426 catgcaaatggctggatggtgtcgaaagaaactggtgatgtctactcaacaaatga 481 ||||| ||||| ||||||||||| || |||| ||| ||| | ||||| |||||||| Sbjct: 2867 catgctaatggatggatggtgtccaaggaaattggagatatttactctacaaatga 2922
>emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chromosome X, complete sequence Length = 194456 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 catgcagaaaggaatgaagg 123 |||||||||||||||||||| Sbjct: 19245 catgcagaaaggaatgaagg 19226
>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete sequence Length = 160587 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gccataagagatggtgctat 409 |||||||||||||||||||| Sbjct: 4525 gccataagagatggtgctat 4544
>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12, complete sequence Length = 65237 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aactgtttagagctgttgca 197 |||||||||||||||||||| Sbjct: 65125 aactgtttagagctgttgca 65144
>gb|AF107548.1| Brassica napus disease resistance-like protein (RGA-4) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gatattgcgaagaagctaag 340 |||||||||||||||||||| Sbjct: 107 gatattgcgaagaagctaag 126
>gb|AC158649.6| Mus musculus 6 BAC RP23-279O6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199438 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcttggggagatcccagaga 93 |||||||||||||||||||| Sbjct: 67393 tcttggggagatcccagaga 67374
>ref|XM_225445.3| PREDICTED: Rattus norvegicus similar to elicitor-like mating protein M81 (LOC307026), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 acattcagtgcagacaggac 232 |||||||||||||||||||| Sbjct: 168 acattcagtgcagacaggac 149
>gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p, complete sequence Length = 189723 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 catgcagaaaggaatgaagg 123 |||||||||||||||||||| Sbjct: 58879 catgcagaaaggaatgaagg 58860
>gb|AC158740.3| Echinops telfairi, clone Echinops telfairi -24265957E1, complete sequence Length = 36700 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctctgacaccatattttgag 146 |||||||||||||||||||| Sbjct: 6984 ctctgacaccatattttgag 7003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,500,321 Number of Sequences: 3902068 Number of extensions: 4500321 Number of successful extensions: 86410 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86245 Number of HSP's gapped (non-prelim): 149 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
