ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags13p07 |
|---|---|
| Clone Library Name | barley_pub |
>HEMH_LEPBI (Q8GCV0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 362 Score = 33.9 bits (76), Expect = 0.36 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -2 Query: 470 TASSTVELTXXXXXSLKFLAMYPLP--SDEELKLRQIGRKFFEDDWEIGETSLVMLRYLD 297 T ST+++ K +A+YP+ SD L +IG +F + WE+G S V + L Sbjct: 263 TEPSTIQMISSLAKQGKHIAVYPISFVSDHIETLEEIGEQFKDLTWEMGGKSFVRIPALG 322 Query: 296 TAP 288 P Sbjct: 323 IYP 325
>DNLI_CAEEL (Q27474) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase| [ATP]) Length = 773 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +1 Query: 331 PISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGYIVKM 510 P+ + + R + R+ DG+ Y A + + ND D +NS EAV+ + EG ++K Sbjct: 388 PLVRKPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSFFDEAVQ--NKCEGLMIKT 445 Query: 511 RD 516 D Sbjct: 446 LD 447
>HEMA_CVPIA (Q8JSP9) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKKMAVYRSLTLVNVPYVYNGSAQPTALCKSGSLILNNPAYIAREANVGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 + EA SG + YIV LC+ N Sbjct: 187 KS----EADFSLSGCDEYIVP-------LCIFN 208
>HEMA_CVBQ (P59709) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBON (Q9DR81) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3)| (H) (HA) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBOK (Q9QAQ9) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBM (P15776) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBLY (P31613) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBLU (Q8V437) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBL9 (P59710) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBG9 (Q66165) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBF (P33468) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 421 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBEN (P59711) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>HEMA_CVBLS (Q9QAR6) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 29.6 bits (65), Expect = 6.8 Identities = 26/93 (27%), Positives = 40/93 (43%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S +C+S S + Y+AR N D Y Sbjct: 127 GLFYTQLYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 +EA SG + YIV LC+ N Sbjct: 187 ----KVEADFYLSGCDEYIVP-------LCIFN 208
>RP1_PAPHA (Q8MJ06) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1| protein homolog) Length = 2152 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/84 (21%), Positives = 37/84 (44%) Frame = +1 Query: 223 GLPAALVNNSLIKSGQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGN 402 GLP+ + NNS+++ G + + + + +N +++ F PI + S N Sbjct: 565 GLPSTISNNSIVEEGVVDSMVSDNKTGIKNFRAY-----DNTNDRFSPISADATHFSSTN 619 Query: 403 GYMARNFNENDEDYVNSTVLEAVE 474 +N +E +STV ++ Sbjct: 620 SGTDKNISEATASETSSTVTARID 643
>ATC_PLAFK (Q08853) Calcium-transporting ATPase (EC 3.6.3.8) (Calcium pump)| Length = 1228 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +1 Query: 328 SPISQSSSKNFRP--ICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGY 498 +P+ S+ K+ P I + FSS +D N ++ NEND++ N+ ++ + GY Sbjct: 571 TPVQSSNKKDKSPRGINKFFSSKND-NSHITSTLNENDKNLKNANHSNYTTAQATTNGY 628
>ATG22_MAGGR (Q51IZ9) Autophagy-related protein 22| Length = 679 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +1 Query: 313 ITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVR 480 I RL S +S +S ++FR SF + + +G +R+ ++D D T E + R Sbjct: 23 IPRLFSRLSHASKRSFRSYSSSFEADDERSGSDSRSQFDSDSDSDMDTSTERGQSR 78
>HEMA_CVP67 (Q8BB26) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3| glycoprotein) Length = 424 Score = 29.3 bits (64), Expect = 8.9 Identities = 26/93 (27%), Positives = 39/93 (41%) Frame = +1 Query: 265 GQLGTAILGAVSKYRNITRLVSPISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDY 444 G T + ++ YR++T + P + S C+S S + Y+AR N D Y Sbjct: 127 GLFYTQVYKKMAVYRSLTLVNVPYVYNGSAQPTAFCKSGSLILNNPAYIAREANVGDYYY 186 Query: 445 VNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 543 + EA SG + YIV LC+ N Sbjct: 187 KS----EADFSLSGCDEYIVP-------LCIFN 208 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,922,826 Number of Sequences: 219361 Number of extensions: 1684049 Number of successful extensions: 5081 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4925 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5080 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
