| Clone Name | rbaal9k08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ634003.1| Schedonorus arundinaceus mRNA for putative mitogen-activated protein kinase (mapk gene) Length = 1470 Score = 373 bits (188), Expect = e-100 Identities = 333/380 (87%), Gaps = 1/380 (0%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || |||||||||| ||||| ||||||| |||| |||||| |||||||| Sbjct: 1187 aagatttatacaaaaaacgaacatgcgaagagcctggtgcggcatactgctctcacatgt 1128 Query: 319 tcattcctgcttgtcacatattcaccatcctggcggcctcggggtgatactggagcatct 378 |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 1127 tcattcctgcttgtcacatattcaccattgtggcggcctcagggtggtactggagcatct 1068 Query: 379 cctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatcga 438 |||||||||||||||| |||||| | ||| || |||||||||||||| |||||||| | Sbjct: 1067 cctgccacaacatttctcggatcgtctctacaccgatgttttcatctatatcaagatcaa 1008 Query: 439 tgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtgct 498 |||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1007 tgggtacctgggcaggagggtttgcggctggatcatacagctcagacatgtaggggtgcg 948 Query: 499 ccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaaca 558 ||||||||| ||||||| |||||||| ||||| || |||||||||||||||||||||| Sbjct: 947 ccagagcctcaatgacactaatccttttagaaggatcaaagacaagcatcttctgcaaca 888 Query: 559 gatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctgggggtg 618 |||||||||||||||| ||| | || ||||||||| || ||||||||||||| |||||| Sbjct: 887 gatcaatggcaagagggtgcacctgtgggtacatgttagagaggggaatccct-ggggtg 829 Query: 619 tatggaagggatttaatgta 638 |||||||||||||| ||||| Sbjct: 828 tatggaagggatttgatgta 809 Score = 65.9 bits (33), Expect = 2e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Minus Query: 120 aactgaactccgcttctacaatacagtagtccatatatactaccaagtactgacccacag 179 ||||||| ||||||||||||| |||||| ||||||||||| |||||| ||| ||| || Sbjct: 1335 aactgaattccgcttctacaacacagtacaacatatatacta-caagtagtgatccatag 1277 Query: 180 ctagagaaatccatacgc-cgtttattgtgcacatatttac 219 | ||| |||||||||||| | |||||||||| |||||||| Sbjct: 1276 ccagaaaaatccatacgctggcttattgtgcaaatatttac 1236 Score = 46.1 bits (23), Expect = 0.15 Identities = 57/66 (86%), Gaps = 3/66 (4%) Strand = Plus / Minus Query: 30 atagagcagcgtctagaattacaacttacaatcaggggaaaaa-agaagattacaactta 88 |||||| |||||||| ||||||||||||| |||| ||||| | |||||||||||||| Sbjct: 1407 atagaggagcgtctaagattacaacttaca--caggttaaaaagaaaagattacaactta 1350 Query: 89 cacaag 94 |||||| Sbjct: 1349 cacaag 1344
>emb|AJ512642.1|OSA512642 Oryza sativa (japonica cultivar-group) mRNA for putative mitogen-activated protein kinase msrmk3 (msrmk3 gene) Length = 1371 Score = 293 bits (148), Expect = 4e-76 Identities = 348/410 (84%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || ||| |||||||||||| | | |||| |||| ||| |||||||| Sbjct: 1203 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1144 Query: 319 tcattcctgcttgtcacatattcaccatcctgg--cggcctcggggtgatactggagcat 376 || ||| ||| |||||||||||||| ||||| | |||| |||||||| |||||||| Sbjct: 1143 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1086 Query: 377 ctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatc 436 ||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1085 ctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatgtcgagatc 1026 Query: 437 gatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtg 496 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1025 gatgggcacttgagcaggagggtttgcgcttggatcatacagtggagacatgtaagggtg 966 Query: 497 ctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaa 556 ||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| Sbjct: 965 ctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatcttctgcaa 906 Query: 557 cagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctggggg 616 ||||||||||||||||||||| |||||||||||||| || ||||||| || || || | Sbjct: 905 cagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatgcc-aggag 847 Query: 617 tgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 |||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 846 tgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 798
>gb|AF216316.1| Oryza sativa MAP kinase 2 mRNA, complete cds Length = 1697 Score = 293 bits (148), Expect = 4e-76 Identities = 348/410 (84%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || ||| |||||||||||| | | |||| |||| ||| |||||||| Sbjct: 1272 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1213 Query: 319 tcattcctgcttgtcacatattcaccatcctgg--cggcctcggggtgatactggagcat 376 || ||| ||| |||||||||||||| ||||| | |||| |||||||| |||||||| Sbjct: 1212 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1155 Query: 377 ctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatc 436 ||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1154 ctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatgtcgagatc 1095 Query: 437 gatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtg 496 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1094 gatgggcacttgagcaggagggtttgcgcttggatcatacagtggagacatgtaagggtg 1035 Query: 497 ctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaa 556 ||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| Sbjct: 1034 ctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatcttctgcaa 975 Query: 557 cagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctggggg 616 ||||||||||||||||||||| |||||||||||||| || ||||||| || || || | Sbjct: 974 cagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatgcc-aggag 916 Query: 617 tgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 |||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 915 tgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 867
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 293 bits (148), Expect = 4e-76 Identities = 348/410 (84%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || ||| |||||||||||| | | |||| |||| ||| |||||||| Sbjct: 28886315 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 28886256 Query: 319 tcattcctgcttgtcacatattcaccatcctgg--cggcctcggggtgatactggagcat 376 || ||| ||| |||||||||||||| ||||| | |||| |||||||| |||||||| Sbjct: 28886255 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 28886198 Query: 377 ctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatc 436 ||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 28886197 ctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatgtcgagatc 28886138 Query: 437 gatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtg 496 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 28886137 gatgggcacttgagcaggagggtttgcgcttggatcatacagtggagacatgtaagggtg 28886078 Query: 497 ctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaa 556 ||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| Sbjct: 28886077 ctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatcttctgcaa 28886018 Query: 557 cagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctggggg 616 ||||||||||||||||||||| |||||||||||||| || ||||||| || || || | Sbjct: 28886017 cagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatgcc-aggag 28885959 Query: 617 tgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 |||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 28885958 tgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 28885910
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 293 bits (148), Expect = 4e-76 Identities = 348/410 (84%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || ||| |||||||||||| | | |||| |||| ||| |||||||| Sbjct: 36359 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 36300 Query: 319 tcattcctgcttgtcacatattcaccatcctgg--cggcctcggggtgatactggagcat 376 || ||| ||| |||||||||||||| ||||| | |||| |||||||| |||||||| Sbjct: 36299 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 36242 Query: 377 ctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatc 436 ||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 36241 ctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatgtcgagatc 36182 Query: 437 gatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtg 496 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 36181 gatgggcacttgagcaggagggtttgcgcttggatcatacagtggagacatgtaagggtg 36122 Query: 497 ctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaa 556 ||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| Sbjct: 36121 ctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatcttctgcaa 36062 Query: 557 cagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctggggg 616 ||||||||||||||||||||| |||||||||||||| || ||||||| || || || | Sbjct: 36061 cagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatgcc-aggag 36003 Query: 617 tgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 |||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 36002 tgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 35954
>emb|AJ251330.1|OSA251330 Oryza sativa mRNA for MAPK4 protein (mapk4 gene) Length = 1653 Score = 285 bits (144), Expect = 9e-74 Identities = 347/410 (84%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 259 aagatttaaaccaagaacgaacatgtgaagaccctggtgtggcacactgctgtcacatgt 318 |||||||| || || ||| |||||||||||| | | |||| |||| ||| |||||||| Sbjct: 1407 aagatttatacaaaaaaccaacatgtgaagatcttagtgtagcacgttgccttcacatgt 1348 Query: 319 tcattcctgcttgtcacatattcaccatcctgg--cggcctcggggtgatactggagcat 376 || ||| ||| |||||||||||||| ||||| | |||| |||||||| |||||||| Sbjct: 1347 tcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatagtggagcat 1290 Query: 377 ctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtcaagatc 436 ||||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1289 ctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatgtcgagatc 1230 Query: 437 gatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtaggggtg 496 ||||||||| ||| |||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 1229 gatgggcacttgaacaggagggtttgcgcttggatcatacagtggagacatgtaagggtg 1170 Query: 497 ctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctgcaa 556 ||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| Sbjct: 1169 ctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatcttctgcaa 1110 Query: 557 cagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatccctggggg 616 ||||||||||||||||||||| |||||||||||||| || ||||||| || || || | Sbjct: 1109 cagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatgcc-aggag 1051 Query: 617 tgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 |||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 1050 tgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 1002
>dbj|AK071376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O04, full insert sequence Length = 1692 Score = 285 bits (144), Expect = 9e-74 Identities = 308/358 (86%), Gaps = 6/358 (1%) Strand = Plus / Minus Query: 311 tcacatgttcattcctgcttgtcacatattcaccatcctg--gcggcctcggggtgatac 368 |||||||||| ||| ||| |||||||||||||| ||||| | |||| |||||||| Sbjct: 1321 tcacatgttcgttcttgcctgtcacatattcac--tcctgcaacaacctctgggtgatag 1264 Query: 369 tggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatg 428 ||||||||||||||||||| ||| |||||||||||||| ||||| |||||||| ||| Sbjct: 1263 tggagcatctcctgccacatcatctcccggatcatatccacgccaagattttcatcgatg 1204 Query: 429 tcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatg 488 || |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1203 tcgagatcgatgggcacttgagcaggagggtttgcgcttggatcatacagtggagacatg 1144 Query: 489 taggggtgctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatc 548 || |||||||||||||| | |||||||| ||||||||||| || || ||||| |||||| Sbjct: 1143 taagggtgctccagagcttcagtgacactaatccttttggagggatcaaagacgagcatc 1084 Query: 549 ttctgcaacagatcaatggcaagaggatgcgcttgcgggtacatgctactgaggggaatc 608 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||| || Sbjct: 1083 ttctgcaacagatcaatggcaagaggatgtgcttgcgggtacatactggtgagggggatg 1024 Query: 609 cctgggggtgtatggaagggatttaatgtaccttgcgtgcttttgagttgtcaatgaa 666 || || ||||||||||||| || || || |||||| || |||| |||||||||||| Sbjct: 1023 cc-aggagtgtatggaagggtcttgatata-cttgcgggcctttgggttgtcaatgaa 968
>gb|BT016743.1| Zea mays clone Contig576 mRNA sequence Length = 1656 Score = 240 bits (121), Expect = 5e-60 Identities = 196/221 (88%) Strand = Plus / Minus Query: 372 agcatctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtca 431 |||||||||||||||| ||||||||||||||| |||| || |||||||| |||||||| Sbjct: 1219 agcatctcctgccacatcatttcccggatcatctctgagctgatgttttcgtctatgtcc 1160 Query: 432 agatcgatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtag 491 |||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 1159 agatcgatgggcacttgggctgggggatttgcgcttgggtcatacagaggggacatgtaa 1100 Query: 492 gggtgctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttc 551 |||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 1099 gggtgctcgagagcctcggtgacactgatccttttggtggggtcgaagatgagcatcttc 1040 Query: 552 tgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 ||||||||||||||||||||||| ||||| || |||||||| Sbjct: 1039 tgcaacagatcaatggcaagagggtgcgcatgtgggtacat 999
>gb|AY105935.1| Zea mays PCO126466 mRNA sequence Length = 1697 Score = 240 bits (121), Expect = 5e-60 Identities = 196/221 (88%) Strand = Plus / Minus Query: 372 agcatctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtca 431 |||||||||||||||| ||||||||||||||| |||| || |||||||| |||||||| Sbjct: 1313 agcatctcctgccacatcatttcccggatcatctctgagctgatgttttcgtctatgtcc 1254 Query: 432 agatcgatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtag 491 |||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 1253 agatcgatgggcacttgggctgggggatttgcgcttgggtcatacagaggggacatgtaa 1194 Query: 492 gggtgctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttc 551 |||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 1193 gggtgctcgagagcctcggtgacactgatccttttggtggggtcgaagatgagcatcttc 1134 Query: 552 tgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 ||||||||||||||||||||||| ||||| || |||||||| Sbjct: 1133 tgcaacagatcaatggcaagagggtgcgcatgtgggtacat 1093
>gb|DQ295030.1| Zea mays putative MAPK mRNA, complete cds Length = 1113 Score = 240 bits (121), Expect = 5e-60 Identities = 196/221 (88%) Strand = Plus / Minus Query: 372 agcatctcctgccacaacatttcccggatcatatctgtgccaatgttttcatctatgtca 431 |||||||||||||||| ||||||||||||||| |||| | |||||||| |||||||| Sbjct: 1070 agcatctcctgccacatcatttcccggatcatctctgagttgatgttttcgtctatgtcc 1011 Query: 432 agatcgatgggcacctgagcaggagggtttgcgctgggatcatacagtggggacatgtag 491 |||||||||||||| || || || || |||||||| ||||||||||| ||||||||||| Sbjct: 1010 agatcgatgggcacttgggctgggggatttgcgcttggatcatacagaggggacatgtaa 951 Query: 492 gggtgctccagagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttc 551 |||||||| ||||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 950 gggtgctcgagagcctcggtgacactgatccttttggtggggtcgaagatgagcatcttc 891 Query: 552 tgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 ||||||||||||||||||||||| ||||| || |||||||| Sbjct: 890 tgcaacagatcaatggcaagagggtgcgcatgtgggtacat 850
>ref|XM_464163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1549 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Minus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 1262 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 1203 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 1202 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 1143 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 1142 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 1083 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 1082 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 1030
>gb|AF216317.1| Oryza sativa MAP kinase 3 mRNA, complete cds Length = 1545 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Minus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 1249 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 1190 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 1189 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 1130 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 1129 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 1070 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 1069 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 1017
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 2643341 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 2643400 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 2643401 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 2643460 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 2643461 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 2643520 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 2643521 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 2643573
>gb|AF241166.1|AF241166 Oryza sativa MAP kinase MAPK2 mRNA, complete cds Length = 1544 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Minus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 1239 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 1180 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 1179 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 1120 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 1119 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 1060 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 1059 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 1007
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Plus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 45563 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 45622 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 45623 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 45682 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 45683 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 45742 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 45743 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 45795
>dbj|AK119650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G10, full insert sequence Length = 1549 Score = 176 bits (89), Expect = 6e-41 Identities = 197/233 (84%) Strand = Plus / Minus Query: 360 gggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaatgttt 419 ||||| || ||||||||||| ||||||| |||||||| ||||||||||| | ||||| Sbjct: 1262 gggtggtagtggagcatctcgtgccacatcatttccctgatcatatctgcactgatgttc 1203 Query: 420 tcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcatacagt 479 || |||||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| Sbjct: 1202 tcgtctatgtccagatcgataggcacttgcgcgggaggatttgcacttggatcatacaga 1143 Query: 480 ggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggtcgaag 539 ||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||| || || Sbjct: 1142 ggggacatgtaagggtgctcaagagcctcggtgacactgattcttttggtaggatcaaat 1083 Query: 540 acaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacat 592 | ||||||||||| || ||||||||||||||||| || || ||||| ||||| Sbjct: 1082 atgagcatcttctgtaaaagatcaatggcaagagggtgtgcatgcggatacat 1030
>gb|BT018644.1| Zea mays clone EL01N0505B01.d mRNA sequence Length = 1630 Score = 151 bits (76), Expect = 3e-33 Identities = 199/240 (82%) Strand = Plus / Minus Query: 355 cctcggggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaa 414 |||||||||| || |||| |||||||||||||| ||| |||| |||||| || ||| | Sbjct: 1309 cctcggggtggtagtggatcatctcctgccacatcatctccctgatcatgtcgacgccga 1250 Query: 415 tgttttcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcat 474 ||| || || ||||| || ||||| |||||||| || |||||||| ||||| || |||| Sbjct: 1249 ggttctcgtcgatgtcgaggtcgatcggcacctgcgcgggagggttcgcgctcgggtcat 1190 Query: 475 acagtggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggt 534 | || || |||||||| ||||||||||| |||| |||||| |||||||| ||||| |||| Sbjct: 1189 agagcggagacatgtacgggtgctccagcgcctcggtgacgctgatcctcttggacgggt 1130 Query: 535 cgaagacaagcatcttctgcaacagatcaatggcaagaggatgcgcttgcgggtacatgc 594 |||| || ||||||||||||| ||| || ||||| ||||| ||||| || |||||||||| Sbjct: 1129 cgaacacgagcatcttctgcagcaggtcgatggcgagagggtgcgcctgagggtacatgc 1070
>gb|AY107930.1| Zea mays PCO133201 mRNA sequence Length = 617 Score = 139 bits (70), Expect = 1e-29 Identities = 187/226 (82%) Strand = Plus / Minus Query: 355 cctcggggtgatactggagcatctcctgccacaacatttcccggatcatatctgtgccaa 414 |||||||||| || |||| |||||||||||||| ||| |||| |||||| || ||| | Sbjct: 231 cctcggggtggtagtggatcatctcctgccacatcatctccctgatcatgtcgacgccga 172 Query: 415 tgttttcatctatgtcaagatcgatgggcacctgagcaggagggtttgcgctgggatcat 474 ||| || || ||||| || ||||| |||||||| || |||||||| ||||| || |||| Sbjct: 171 ggttctcgtcgatgtcgaggtcgatcggcacctgcgcgggagggttcgcgctcgggtcat 112 Query: 475 acagtggggacatgtaggggtgctccagagcctgggtgacactgatccttttggaagggt 534 | || || |||||||| ||||||||||| |||| |||||| |||||||| ||||| |||| Sbjct: 111 agagcggagacatgtacgggtgctccagcgcctcggtgacgctgatcctcttggacgggt 52 Query: 535 cgaagacaagcatcttctgcaacagatcaatggcaagaggatgcgc 580 |||| || ||||||||||||| ||| || ||||| ||||| ||||| Sbjct: 51 cgaacacgagcatcttctgcagcaggtcgatggcgagagggtgcgc 6
>dbj|D21288.1|RICSS516 Oryza sativa SS516 mRNA for MAP kinase, partial sequence Length = 280 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/93 (82%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 501 agagcctgggtgacactgatccttttggaagggtcgaagacaagcatcttctg-caacag 559 ||||||| |||||||||||| ||||||| ||| || || | ||||||||||| || || Sbjct: 272 agagcctcggtgacactgattcttttggtaggatcaaatatgagcatcttctgtaaaaag 213 Query: 560 atcaatggcaagaggatgcgcttgcgggtacat 592 ||||||||||||| | || || ||||| ||||| Sbjct: 212 atcaatggcaaganggtgtgcatgcggatacat 180
>gb|BT012964.1| Lycopersicon esculentum clone 114155F, mRNA sequence Length = 1688 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 513 acactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaat 565 ||||| || |||||||||||||| || ||||||||| |||||| |||||||| Sbjct: 1301 acactaattcttttggaagggtcaaacacaagcatcctctgcaggagatcaat 1249
>ref|NM_202320.1| Arabidopsis thaliana ATMPK2 (MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2); MAP kinase/ kinase AT1G59580 (ATMPK2) transcript variant AT1G59580.2 mRNA, complete cds Length = 1534 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1045 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 987
>ref|NM_104651.2| Arabidopsis thaliana ATMPK2 (MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2); MAP kinase/ kinase AT1G59580 (ATMPK2) transcript variant AT1G59580.1 mRNA, complete cds Length = 1610 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1108 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 1050
>gb|AY113911.1| Arabidopsis thaliana unknown protein (At1g59580) mRNA, complete cds Length = 1162 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 932 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 874
>gb|AY035134.1| Arabidopsis thaliana unknown protein (At1g59580) mRNA, complete cds Length = 1613 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1108 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 1050
>emb|BX816181.1|CNS0ABS2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1361 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1060 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 1002
>emb|BX813528.1|CNS0AC9P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1491 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1043 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 985
>emb|BX815541.1|CNS0ABJ8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1067 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 1009
>emb|BX823373.1|CNS0A5EP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 495 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 437
>gb|AC009317.4|AC009317 Genomic sequence for Arabidopsis thaliana BAC T30E16 from chromosome I, complete sequence Length = 100008 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 510 gtgacactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 |||||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 34652 gtgacactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 34594
>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23, complete sequence Length = 209342 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 278 aacatgtgaagaccctggtgtggcac 303 ||||||||||||| |||||||||||| Sbjct: 153578 aacatgtgaagactctggtgtggcac 153553
>gb|AC073987.4| Homo sapiens BAC clone RP11-441C24 from 2, complete sequence Length = 152351 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 gtgctccagagcctgggtgaca 515 |||||||||||||||||||||| Sbjct: 110559 gtgctccagagcctgggtgaca 110538
>emb|AJ784996.1| Papaver rhoeas mRNA for putative MAP kinase (mpkc gene) Length = 1744 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 419 ttcatctatgtcaagatcgatgggcacctgagcaggagggt 459 |||||||||||| ||||||| || ||||| |||||||||| Sbjct: 1320 ttcatctatgtcgagatcgactggaacctgtgcaggagggt 1280
>ref|XM_239684.3| PREDICTED: Rattus norvegicus similar to Myosin XVIIIB (Myosin 18B) (LOC304551), mRNA Length = 8496 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 ccatcctggcggcctcggggt 363 ||||||||||||||||||||| Sbjct: 2333 ccatcctggcggcctcggggt 2313
>gb|AC100865.5| Homo sapiens chromosome 11, clone RP11-449L13, complete sequence Length = 202683 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ccagagcctgggtgacactga 519 ||||||||||||||||||||| Sbjct: 146111 ccagagcctgggtgacactga 146131
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 aatcaggggaaaaaagaagat 79 ||||||||||||||||||||| Sbjct: 27783 aatcaggggaaaaaagaagat 27763
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 1613681 aattgcattaaagatttaaa 1613662
>ref|NM_001035940.1| Arabidopsis thaliana ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1); MAP kinase/ kinase AT1G10210 (ATMPK1) transcript variant AT1G10210.2 mRNA, complete cds Length = 1861 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 1354 agatcgataggaacttgagcaggagggtttgc 1323
>ref|NM_100895.2| Arabidopsis thaliana ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1); MAP kinase/ kinase AT1G10210 (ATMPK1) transcript variant AT1G10210.1 mRNA, complete cds Length = 1631 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 1124 agatcgataggaacttgagcaggagggtttgc 1093
>ref|XM_585790.2| PREDICTED: Bos taurus hypothetical LOC508934 (LOC508934), mRNA Length = 1057 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tgcattaaagatttaaacca 271 |||||||||||||||||||| Sbjct: 329 tgcattaaagatttaaacca 348
>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence Length = 191237 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 92543 gctactgaggggaatccctg 92562
>gb|AC161008.4| Pan troglodytes BAC clone CH251-634F15 from chromosome 7, complete sequence Length = 208418 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcatatctgtgccaatgttt 419 |||||||||||||||||||| Sbjct: 170050 tcatatctgtgccaatgttt 170069
>gb|AC147300.3| Pan troglodytes BAC clone RP43-56D24 from 7, complete sequence Length = 200924 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcatatctgtgccaatgttt 419 |||||||||||||||||||| Sbjct: 46488 tcatatctgtgccaatgttt 46469
>gb|AC105457.1| Homo sapiens chromosome 21 clone RP11-271G11 map p11-q21.1, complete sequence Length = 164841 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 99415 gctactgaggggaatccctg 99396
>gb|AC121572.2| Mus musculus BAC clone RP23-234P16 from 5, complete sequence Length = 136697 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 402 atatctgtgccaatgttttcatctatgt 429 ||||||||| |||||||||||| ||||| Sbjct: 5861 atatctgtggcaatgttttcatgtatgt 5834
>gb|AC004015.1| Homo sapiens BAC clone CTA-333F24 from 7, complete sequence Length = 144239 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcatatctgtgccaatgttt 419 |||||||||||||||||||| Sbjct: 44154 tcatatctgtgccaatgttt 44173
>emb|AL391382.10| Human DNA sequence from clone RP11-38M15 on chromosome 13 Contains a chromosome 21 open reading frame 70 (C21orf70) pseudogene, two novel genes, a calponin 3 acidic (CNN3) pseudogene, a zinc finger protein 267 (ZNF267) pseudogene, two novel pseudogenes, a novel gene similar to chromosome 21 open reading frame 15 (C21orf15), a pseudogene similar to cytochrome P450 subfamily IVF polypeptide 8 (CYP4F8) (CPF8, CYPIVF8), a pseudogene similar to sorting nexin 18 (SNX18), a melanoma antigen pseudogene and a CpG island, complete sequence Length = 186458 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 112995 gctactgaggggaatccctg 112976
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 1599309 aattgcattaaagatttaaa 1599290
>gb|BT000062.1| Arabidopsis thaliana putative mitogen-activated protein kinase homolog 7 (At1g10210) mRNA, complete cds Length = 1470 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 1010 agatcgataggaacttgagcaggagggtttgc 979
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 1602999 aattgcattaaagatttaaa 1602980
>gb|AC011846.16| Homo sapiens chromosome 15, clone RP11-346A8, complete sequence Length = 147760 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 ctccagagcctgggtgacac 516 |||||||||||||||||||| Sbjct: 109335 ctccagagcctgggtgacac 109316
>gb|AY059937.1| Arabidopsis thaliana putative mitogen-activated protein kinase homolog 7 (At1g10210; F14N23.9) mRNA, complete cds Length = 1596 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 1090 agatcgataggaacttgagcaggagggtttgc 1059
>gb|AC093214.2| Homo sapiens chromosome 5 clone CTD-2060C23, complete sequence Length = 148327 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ctccagagcctgggtgacac 516 |||||||||||||||||||| Sbjct: 126139 ctccagagcctgggtgacac 126158
>gb|AC161936.2| Pan troglodytes BAC clone CH251-175C18 from chromosome 7, complete sequence Length = 159071 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tcatatctgtgccaatgttt 419 |||||||||||||||||||| Sbjct: 84022 tcatatctgtgccaatgttt 84041
>gb|AC016594.7| Homo sapiens chromosome 5 clone CTD-2010O3, complete sequence Length = 146235 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ctccagagcctgggtgacac 516 |||||||||||||||||||| Sbjct: 94516 ctccagagcctgggtgacac 94535
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 531 gggtcgaagacaagcatcttctgcaaca 558 ||||||||||||||||| |||| ||||| Sbjct: 807954 gggtcgaagacaagcattttctccaaca 807981
>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence Length = 152232 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 taattgcattaaagatttaa 267 |||||||||||||||||||| Sbjct: 65217 taattgcattaaagatttaa 65198
>emb|BX814791.1|CNS0ABZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1517 Score = 40.1 bits (20), Expect = 9.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 513 acactgatccttttggaagggtcgaagacaagcatcttctgcaacagatcaatggc 568 ||||| |||||||| |||||||| | || ||||| ||||| | |||||||||||| Sbjct: 1085 acactaatccttttcgaagggtcaagaacgagcattttctgaagcagatcaatggc 1030
>gb|AC107067.3| Homo sapiens BAC clone RP11-10L7 from 4, complete sequence Length = 112291 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ctccagagcctgggtgacac 516 |||||||||||||||||||| Sbjct: 93838 ctccagagcctgggtgacac 93857
>gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, complete sequence Length = 193698 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 402 atatctgtgccaatgttttcatctatgt 429 ||||||||| |||||||||||| ||||| Sbjct: 8748 atatctgtggcaatgttttcatgtatgt 8775
>gb|AC106900.3| Homo sapiens BAC clone RP11-796E10 from 2, complete sequence Length = 149495 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gtttattgtgcacatattta 218 |||||||||||||||||||| Sbjct: 7660 gtttattgtgcacatattta 7679
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 1653318 aattgcattaaagatttaaa 1653299
>gb|AC113174.3| Homo sapiens chromosome 1 clone RP11-397A15, complete sequence Length = 175470 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aatcaggggaaaaaagaaga 78 |||||||||||||||||||| Sbjct: 80371 aatcaggggaaaaaagaaga 80352
>dbj|D14713.1|ATHATMPK1 Arabidopsis thaliana mRNA for ATMPK1, complete cds Length = 1520 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 1117 agatcgataggaacttgagcaggagggtttgc 1086
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 cttttggaagggtcgaagac 541 |||||||||||||||||||| Sbjct: 5959091 cttttggaagggtcgaagac 5959072
>ref|NM_211775.1| Eremothecium gossypii AGR048Cp (AGR048C), mRNA Length = 1362 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 531 gggtcgaagacaagcatcttctgcaaca 558 ||||||||||||||||| |||| ||||| Sbjct: 878 gggtcgaagacaagcattttctccaaca 851
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 Length = 340000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 266360 gctactgaggggaatccctg 266341
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence Length = 160193 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agtagtccatatatactacc 163 |||||||||||||||||||| Sbjct: 154908 agtagtccatatatactacc 154889
>gb|AC005489.1|AC005489 Genomic sequence for Arabidopsis thaliana BAC F14N23 from Chromosome 1, complete sequence Length = 100746 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 agatcgatgggcacctgagcaggagggtttgc 463 |||||||| || || ||||||||||||||||| Sbjct: 31033 agatcgataggaacttgagcaggagggtttgc 31002
>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus, complete sequence Length = 131971 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 3743 gctactgaggggaatccctg 3724
>gb|AC005599.5|AC005599 Homo sapiens chromosome 4 clone C0026P05 map 4P16, complete sequence Length = 145173 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 649 ttttgagttgtcaatgaatg 668 |||||||||||||||||||| Sbjct: 47488 ttttgagttgtcaatgaatg 47507
>emb|AL132801.5|CNS01DTN Human chromosome 14 DNA sequence BAC R-661D19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168624 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 attacaacttacacaagctt 97 |||||||||||||||||||| Sbjct: 143335 attacaacttacacaagctt 143354
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete sequence Length = 221351 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agtagtccatatatactacc 163 |||||||||||||||||||| Sbjct: 96658 agtagtccatatatactacc 96639
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gtgctccagagcctgggtga 513 |||||||||||||||||||| Sbjct: 111780 gtgctccagagcctgggtga 111761
>gb|AC163711.3| Gallus gallus BAC clone CH261-27J21 from chromosome ul, complete sequence Length = 232951 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 tggcacactgctgtcacatgttca 321 ||||||||||||||| |||||||| Sbjct: 206964 tggcacactgctgtctcatgttca 206941
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 1963265 aattgcattaaagatttaaa 1963284
>gb|AC149588.4| Mus musculus BAC clone RP23-366I10 from 15, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 53754 aattgcattaaagatttaaa 53735
>emb|AL929147.7| Mouse DNA sequence from clone RP23-429P18 on chromosome 2, complete sequence Length = 155602 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ataattgcattaaagattta 266 |||||||||||||||||||| Sbjct: 131006 ataattgcattaaagattta 130987
>dbj|AP005212.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-757O6, complete sequence Length = 174439 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 8968 gctactgaggggaatccctg 8987
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aattgcattaaagatttaaa 268 |||||||||||||||||||| Sbjct: 2125207 aattgcattaaagatttaaa 2125188
>gb|L06278.1|HUMSN5A Human centromeric SN5 satellite DNA sequence Length = 455 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 370 gctactgaggggaatccctg 351
>dbj|AP002350.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2552C2 Length = 109381 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gtgctccagagcctgggtga 513 |||||||||||||||||||| Sbjct: 627 gtgctccagagcctgggtga 608
>dbj|AP001466.1| Homo sapiens genomic DNA, chromosome 21q11.1, clone:R111H17, D21S290-LL56 region, complete sequence Length = 115693 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gctactgaggggaatccctg 612 |||||||||||||||||||| Sbjct: 57635 gctactgaggggaatccctg 57616
>emb|AL670259.6| Mouse DNA sequence from clone RP23-321M16 on chromosome 4, complete sequence Length = 124565 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 cttttgagttgtcaatgaat 667 |||||||||||||||||||| Sbjct: 93718 cttttgagttgtcaatgaat 93737 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,410,257 Number of Sequences: 3902068 Number of extensions: 6410257 Number of successful extensions: 119711 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119343 Number of HSP's gapped (non-prelim): 353 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)