ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags13m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
11433A_HORVU (P29305) 14-3-3-like protein A (14-3-3A) 53 5e-07
21433_ORYSA (Q06967) 14-3-3-like protein S94 46 8e-05
31433_MESCR (P93259) 14-3-3-like protein (G-box-binding factor) 39 0.010
41433_OENHO (P29307) 14-3-3-like protein 33 0.57
514334_LYCES (P42652) 14-3-3 protein 4 (PBLT4) 33 0.57
614333_ARATH (P42644) 14-3-3-like protein GF14 psi (General regul... 30 3.7
71433_LILLO (Q9SP07) 14-3-3-like protein 30 4.8
814335_SOLTU (P93784) 14-3-3-like protein 16R 30 4.8

>1433A_HORVU (P29305) 14-3-3-like protein A (14-3-3A)|
          Length = 262

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPEGEGH 94
           TSDNAEEGGDEIKEAASKPEGEGH
Sbjct: 238 TSDNAEEGGDEIKEAASKPEGEGH 261



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>1433_ORYSA (Q06967) 14-3-3-like protein S94|
          Length = 260

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPEGEGH 94
           TSDNAE+GGDEIKEAA KPEGEGH
Sbjct: 238 TSDNAEDGGDEIKEAA-KPEGEGH 260



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>1433_MESCR (P93259) 14-3-3-like protein (G-box-binding factor)|
          Length = 264

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPE 82
           TSDNAEEGGDEIKEAA+K E
Sbjct: 237 TSDNAEEGGDEIKEAAAKRE 256



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>1433_OENHO (P29307) 14-3-3-like protein|
          Length = 260

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPE 82
           TSD  ++GGDEIKEAA KP+
Sbjct: 238 TSDMQDDGGDEIKEAAPKPD 257



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>14334_LYCES (P42652) 14-3-3 protein 4 (PBLT4)|
          Length = 260

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPEGEG 91
           TSDNA++ GD+IKEA+    GEG
Sbjct: 236 TSDNADDVGDDIKEASKPESGEG 258



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>14333_ARATH (P42644) 14-3-3-like protein GF14 psi (General regulatory factor 3)|
           (14-3-3-like protein RCI1)
          Length = 255

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPEG 85
           TSD  +E GDEIKE ASKP+G
Sbjct: 234 TSDMTDEAGDEIKE-ASKPDG 253



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>1433_LILLO (Q9SP07) 14-3-3-like protein|
          Length = 259

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPEGE 88
           TSD  EE GDEIKEA+   EG+
Sbjct: 238 TSDINEEAGDEIKEASKAVEGQ 259



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>14335_SOLTU (P93784) 14-3-3-like protein 16R|
          Length = 258

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 23  TSDNAEEGGDEIKEAASKPE 82
           TSD  ++G DEIKEAA KP+
Sbjct: 236 TSDMQDDGTDEIKEAAPKPD 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,740,193
Number of Sequences: 219361
Number of extensions: 1326449
Number of successful extensions: 2970
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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