| Clone Name | bags13m02 |
|---|---|
| Clone Library Name | barley_pub |
>PP11_HUMAN (P21128) Placental protein 11 precursor (EC 3.4.21.-) (PP11)| Length = 369 Score = 74.3 bits (181), Expect = 2e-13 Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 3/155 (1%) Frame = +1 Query: 148 TREELNSLTEACSRLWELDMNRLVPGKDYRIE---CGEGKKVYQKDDMASENLFSWLGED 318 T+EE+ S++E +++ D N+ +D + C + + D + LF+++ E Sbjct: 96 TKEEIQSISE---KIYRADTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNEK 151 Query: 319 VLTKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEAAFIEEIARTAPIKYLHRYLVLKGV 498 + +KPTY+ F LL+NY G+ E + Q+ E+ AF+ EI +TA +K L+ +L + Sbjct: 152 LFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFLHHQNR 211 Query: 499 ASQDYDDFKAMLTSLWFTLYGRCGNSSCSSAFEHV 603 + +F L ++WF LY R SS FEHV Sbjct: 212 YGSE-QEFVDDLKNMWFGLYSRGNEEGDSSGFEHV 245
>MAD1_CANGA (Q6FS63) Spindle assembly checkpoint component MAD1 (Mitotic arrest| deficient protein 1) Length = 657 Score = 33.5 bits (75), Expect = 0.49 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 2/119 (1%) Frame = +1 Query: 58 EAWNGYKRPPSEQEYSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLVPGKDYR 237 E WN + +Q+ S D H + E R ELN +TE + + + N + + Sbjct: 266 EEWNKFLSNKKQQDNSNDYSIDHFIIEFESQRRELNMVTEELAEVKKSYYNSKILNDELA 325 Query: 238 IECGEGKKVYQKDDMASE--NLFSWLGEDVLTKPTYSRFCALLDNYNPHQGYKEVVTQQ 408 +E + K+ KDD + NL E K C+LL N P KE + QQ Sbjct: 326 LERNQLLKL--KDDYENNIINLEKLNHELEQQKVLLEEECSLLKNQIP---TKENLNQQ 379
>GBLP_MEDSA (O24076) Guanine nucleotide-binding protein beta subunit-like| protein Length = 325 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLV 219 YS D G I H L P R L + TE+ ++W+L+ +V Sbjct: 229 YSLDAGSIIHALCFSPNRYWLCAATESSIKIWDLESKSIV 268
>GBLP_SOYBN (Q39836) Guanine nucleotide-binding protein beta subunit-like| protein Length = 325 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLV 219 YS D G I H L P+R L + TE ++W+L+ +V Sbjct: 229 YSLDAGSIIHALCFSPSRYWLCAATEQSIKIWDLESKSIV 268
>GBLP_TOBAC (P49026) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLVPGKDYRIECGEGKKVYQKDD 279 YS + G I H L P R L + TE+ ++W+L+ +V D +++ + Q+ + Sbjct: 230 YSLESGSIIHSLCFSPNRYWLCAATESSIKIWDLESKSIV--DDLKVD------LKQESE 281 Query: 280 MASENLFS 303 M+SE S Sbjct: 282 MSSEGTAS 289
>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like| protein (GPB-LR) (RWD) Length = 334 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLVPGKDYRIECGEGKKVY 267 YS D G I H L P R L + T+ ++W+L+ +V I + + +Y Sbjct: 245 YSLDAGSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVSKNQMLY 300
>GBLP_NICPL (P93340) Guanine nucleotide-binding protein beta subunit-like| protein Length = 326 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/68 (27%), Positives = 35/68 (51%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLVPGKDYRIECGEGKKVYQKDD 279 YS + G I H L P R L + TE+ ++W+L+ +V D +++ + Q+ + Sbjct: 230 YSLESGSIIHSLCFSPNRYWLCAATESSIKIWDLESKTIV--DDLKVD------LKQESE 281 Query: 280 MASENLFS 303 M++E S Sbjct: 282 MSAEGTAS 289
>GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subunit-like| protein Length = 318 Score = 29.6 bits (65), Expect = 7.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 100 YSEDVGQIHHGLNVEPTREELNSLTEACSRLWELDMNRLV 219 YS D G + H L P R L + T++ ++W+L+ +V Sbjct: 230 YSLDAGDVIHCLCFSPNRYWLCAATQSSIKIWDLESKSIV 269
>RK3_PORPU (P51314) Chloroplast 50S ribosomal protein L3| Length = 205 Score = 29.3 bits (64), Expect = 9.2 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = +1 Query: 361 DNYNPHQ-GYKEVVTQQDKHEEAAFIEEIARTAPIKYLHRYLV 486 D YN Q GYK+VV Q+ +++ +++ P+KYL YLV Sbjct: 44 DGYNAIQVGYKQVVEQKLSKPLLGHLKK-SQSPPLKYLREYLV 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.133 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,807,000 Number of Sequences: 219361 Number of extensions: 1759701 Number of successful extensions: 4744 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4581 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4743 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)