| Clone Name | bags13m02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473375.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 595 bits (300), Expect = e-167 Identities = 508/576 (88%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 28 aaaagcaccatggnaagaccacaacagtgtgaagcatggaacggatacaaaaggccacca 87 ||||||| ||||| ||| ||||| |||| |||||||||||| | ||||| |||||||||| Sbjct: 434 aaaagcatcatgg-aaggccacagcagtctgaagcatggaatgcatacagaaggccacca 492 Query: 88 tctgaacaagagtactctgaagatgttggtcagatccaccacggcctaaatgtagaacct 147 ||||||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 493 tctgaacaacagtactgtgaggatgctggtcagatccaccatggcctaaatgtagaacca 552 Query: 148 accagggaagagctcaacagcttgacagaagcatgtagccggctgtgggagcttgacatg 207 |||||||| |||||||||||||| || ||| ||||||||||||||||| || || ||| Sbjct: 553 accagggaggagctcaacagcttatcaagagcttgtagccggctgtgggaactcgatatg 612 Query: 208 aaccgtcttgttcctggcaaggactacagaattgaatgtggagagggaaagaaggtttat 267 ||||| || ||||| |||||||||||||| |||||||| || || |||||||| ||| Sbjct: 613 aaccgcctaacacctggtaaggactacagaatcgaatgtggcgaagggaagaaggtatat 672 Query: 268 cagaaggatgatatggcatctgaaaacttgttcagctggctaggcgaggatgtgcttacc 327 ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 673 cagaagggtgatatggcatctgaaactttgttcagctggctaggcgatgatgtgcttaga 732 Query: 328 aagcccacctactctcgcttctgtgcgcttcttgacaattacaacccacaccaagggtac 387 ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 733 aagcccacctactctcgtttctgcgcgcttcttgacaattacaatccacatcaagggtac 792 Query: 388 aaagaagttgttactcagcaggataagcacgaagaagcagcatttattgaagagattgcc 447 ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 793 aaagaagttgttactcagcaggacaagcacgaggaagtagcatttattgaagagattgcc 852 Query: 448 cggacagcaccgattaagtacttgcaccggtatttagtgctgaagggagtcgcatcccaa 507 ||||||| || || |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 853 aggacagcgccaatcaagtacttacaccggtatttagtgctcaagggagtcgcgtctcaa 912 Query: 508 gactatgatgacttcaaggcaatgctgacatccctttggtttactttgtatggaagatgt 567 |||||||| ||||||||| |||||||||||| || ||||| ||||||||||||| || Sbjct: 913 gactatgaggacttcaagagaatgctgacatcgctatggttcgatttgtatggaagaggt 972 Query: 568 ggtaactctagctgctcttctgcatttgagcatgtg 603 || | |||||| ||||||||||||||||||||||| Sbjct: 973 ggcagttctagcagctcttctgcatttgagcatgtg 1008
>dbj|AK068610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155A07, full insert sequence Length = 1837 Score = 595 bits (300), Expect = e-167 Identities = 508/576 (88%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 28 aaaagcaccatggnaagaccacaacagtgtgaagcatggaacggatacaaaaggccacca 87 ||||||| ||||| ||| ||||| |||| |||||||||||| | ||||| |||||||||| Sbjct: 626 aaaagcatcatgg-aaggccacagcagtctgaagcatggaatgcatacagaaggccacca 684 Query: 88 tctgaacaagagtactctgaagatgttggtcagatccaccacggcctaaatgtagaacct 147 ||||||||| |||||| ||| |||| ||||||||||||||| ||||||||||||||||| Sbjct: 685 tctgaacaacagtactgtgaggatgctggtcagatccaccatggcctaaatgtagaacca 744 Query: 148 accagggaagagctcaacagcttgacagaagcatgtagccggctgtgggagcttgacatg 207 |||||||| |||||||||||||| || ||| ||||||||||||||||| || || ||| Sbjct: 745 accagggaggagctcaacagcttatcaagagcttgtagccggctgtgggaactcgatatg 804 Query: 208 aaccgtcttgttcctggcaaggactacagaattgaatgtggagagggaaagaaggtttat 267 ||||| || ||||| |||||||||||||| |||||||| || || |||||||| ||| Sbjct: 805 aaccgcctaacacctggtaaggactacagaatcgaatgtggcgaagggaagaaggtatat 864 Query: 268 cagaaggatgatatggcatctgaaaacttgttcagctggctaggcgaggatgtgcttacc 327 ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 865 cagaagggtgatatggcatctgaaactttgttcagctggctaggcgatgatgtgcttaga 924 Query: 328 aagcccacctactctcgcttctgtgcgcttcttgacaattacaacccacaccaagggtac 387 ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 925 aagcccacctactctcgtttctgcgcgcttcttgacaattacaatccacatcaagggtac 984 Query: 388 aaagaagttgttactcagcaggataagcacgaagaagcagcatttattgaagagattgcc 447 ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| Sbjct: 985 aaagaagttgttactcagcaggacaagcacgaggaagtagcatttattgaagagattgcc 1044 Query: 448 cggacagcaccgattaagtacttgcaccggtatttagtgctgaagggagtcgcatcccaa 507 ||||||| || || |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 1045 aggacagcgccaatcaagtacttacaccggtatttagtgctcaagggagtcgcgtctcaa 1104 Query: 508 gactatgatgacttcaaggcaatgctgacatccctttggtttactttgtatggaagatgt 567 |||||||| ||||||||| |||||||||||| || ||||| ||||||||||||| || Sbjct: 1105 gactatgaggacttcaagagaatgctgacatcgctatggttcgatttgtatggaagaggt 1164 Query: 568 ggtaactctagctgctcttctgcatttgagcatgtg 603 || | |||||| ||||||||||||||||||||||| Sbjct: 1165 ggcagttctagcagctcttctgcatttgagcatgtg 1200
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 589 bits (297), Expect = e-165 Identities = 489/553 (88%) Strand = Plus / Plus Query: 51 acagtgtgaagcatggaacggatacaaaaggccaccatctgaacaagagtactctgaaga 110 ||||| |||||||||||| | ||||| ||||||||||||||||||| |||||| ||| || Sbjct: 109540 acagtctgaagcatggaatgcatacagaaggccaccatctgaacaacagtactgtgagga 109599 Query: 111 tgttggtcagatccaccacggcctaaatgtagaacctaccagggaagagctcaacagctt 170 || ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 109600 tgctggtcagatccaccatggcctaaatgtagaaccaaccagggaggagctcaacagctt 109659 Query: 171 gacagaagcatgtagccggctgtgggagcttgacatgaaccgtcttgttcctggcaagga 230 || ||| ||||||||||||||||| || || |||||||| || ||||| ||||| Sbjct: 109660 atcaagagcttgtagccggctgtgggaactcgatatgaaccgcctaacacctggtaagga 109719 Query: 231 ctacagaattgaatgtggagagggaaagaaggtttatcagaaggatgatatggcatctga 290 ||||||||| |||||||| || || |||||||| |||||||||| ||||||||||||||| Sbjct: 109720 ctacagaatcgaatgtggcgaagggaagaaggtatatcagaagggtgatatggcatctga 109779 Query: 291 aaacttgttcagctggctaggcgaggatgtgcttaccaagcccacctactctcgcttctg 350 || |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| Sbjct: 109780 aactttgttcagctggctaggcgatgatgtgcttagaaagcccacctactctcgtttctg 109839 Query: 351 tgcgcttcttgacaattacaacccacaccaagggtacaaagaagttgttactcagcagga 410 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 109840 cgcgcttcttgacaattacaatccacatcaagggtacaaagaagttgttactcagcagga 109899 Query: 411 taagcacgaagaagcagcatttattgaagagattgcccggacagcaccgattaagtactt 470 |||||||| |||| |||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 109900 caagcacgaggaagtagcatttattgaagagattgccaggacagcgccaatcaagtactt 109959 Query: 471 gcaccggtatttagtgctgaagggagtcgcatcccaagactatgatgacttcaaggcaat 530 ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| ||| Sbjct: 109960 acaccggtatttagtgctcaagggagtcgcgtctcaagactatgaggacttcaagagaat 110019 Query: 531 gctgacatccctttggtttactttgtatggaagatgtggtaactctagctgctcttctgc 590 ||||||||| || ||||| ||||||||||||| |||| | |||||| |||||||||| Sbjct: 110020 gctgacatcgctatggttcgatttgtatggaagaggtggcagttctagcagctcttctgc 110079 Query: 591 atttgagcatgtg 603 ||||||||||||| Sbjct: 110080 atttgagcatgtg 110092
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 589 bits (297), Expect = e-165 Identities = 489/553 (88%) Strand = Plus / Plus Query: 51 acagtgtgaagcatggaacggatacaaaaggccaccatctgaacaagagtactctgaaga 110 ||||| |||||||||||| | ||||| ||||||||||||||||||| |||||| ||| || Sbjct: 27166897 acagtctgaagcatggaatgcatacagaaggccaccatctgaacaacagtactgtgagga 27166956 Query: 111 tgttggtcagatccaccacggcctaaatgtagaacctaccagggaagagctcaacagctt 170 || ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 27166957 tgctggtcagatccaccatggcctaaatgtagaaccaaccagggaggagctcaacagctt 27167016 Query: 171 gacagaagcatgtagccggctgtgggagcttgacatgaaccgtcttgttcctggcaagga 230 || ||| ||||||||||||||||| || || |||||||| || ||||| ||||| Sbjct: 27167017 atcaagagcttgtagccggctgtgggaactcgatatgaaccgcctaacacctggtaagga 27167076 Query: 231 ctacagaattgaatgtggagagggaaagaaggtttatcagaaggatgatatggcatctga 290 ||||||||| |||||||| || || |||||||| |||||||||| ||||||||||||||| Sbjct: 27167077 ctacagaatcgaatgtggcgaagggaagaaggtatatcagaagggtgatatggcatctga 27167136 Query: 291 aaacttgttcagctggctaggcgaggatgtgcttaccaagcccacctactctcgcttctg 350 || |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| Sbjct: 27167137 aactttgttcagctggctaggcgatgatgtgcttagaaagcccacctactctcgtttctg 27167196 Query: 351 tgcgcttcttgacaattacaacccacaccaagggtacaaagaagttgttactcagcagga 410 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 27167197 cgcgcttcttgacaattacaatccacatcaagggtacaaagaagttgttactcagcagga 27167256 Query: 411 taagcacgaagaagcagcatttattgaagagattgcccggacagcaccgattaagtactt 470 |||||||| |||| |||||||||||||||||||||| ||||||| || || |||||||| Sbjct: 27167257 caagcacgaggaagtagcatttattgaagagattgccaggacagcgccaatcaagtactt 27167316 Query: 471 gcaccggtatttagtgctgaagggagtcgcatcccaagactatgatgacttcaaggcaat 530 ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||| ||| Sbjct: 27167317 acaccggtatttagtgctcaagggagtcgcgtctcaagactatgaggacttcaagagaat 27167376 Query: 531 gctgacatccctttggtttactttgtatggaagatgtggtaactctagctgctcttctgc 590 ||||||||| || ||||| ||||||||||||| |||| | |||||| |||||||||| Sbjct: 27167377 gctgacatcgctatggttcgatttgtatggaagaggtggcagttctagcagctcttctgc 27167436 Query: 591 atttgagcatgtg 603 ||||||||||||| Sbjct: 27167437 atttgagcatgtg 27167449
>gb|AY224498.1| Oryza sativa (japonica cultivar-group) isolate 31120 putative serine protease-like protein mRNA, partial cds Length = 910 Score = 569 bits (287), Expect = e-159 Identities = 470/531 (88%) Strand = Plus / Plus Query: 73 tacaaaaggccaccatctgaacaagagtactctgaagatgttggtcagatccaccacggc 132 |||| ||||||||||||||||||| |||||| ||| |||| ||||||||||||||| ||| Sbjct: 1 tacagaaggccaccatctgaacaacagtactgtgaggatgctggtcagatccaccatggc 60 Query: 133 ctaaatgtagaacctaccagggaagagctcaacagcttgacagaagcatgtagccggctg 192 |||||||||||||| |||||||| |||||||||||||| || ||| |||||||||||| Sbjct: 61 ctaaatgtagaaccaaccagggaggagctcaacagcttatcaagagcttgtagccggctg 120 Query: 193 tgggagcttgacatgaaccgtcttgttcctggcaaggactacagaattgaatgtggagag 252 ||||| || || |||||||| || ||||| |||||||||||||| |||||||| || Sbjct: 121 tgggaactcgatatgaaccgcctaacacctggtaaggactacagaatcgaatgtggcgaa 180 Query: 253 ggaaagaaggtttatcagaaggatgatatggcatctgaaaacttgttcagctggctaggc 312 || |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 181 gggaagaaggtatatcagaagggtgatatggcatctgaaactttgttcagctggctaggc 240 Query: 313 gaggatgtgcttaccaagcccacctactctcgcttctgtgcgcttcttgacaattacaac 372 || |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 241 gatgatgtgcttagaaagcccacctactctcgtttctgcgcgcttcttgacaattacaat 300 Query: 373 ccacaccaagggtacaaagaagttgttactcagcaggataagcacgaagaagcagcattt 432 ||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct: 301 ccacatcaagggtacaaagaagttgttactcagcaggacaagcacgaggaagtagcattt 360 Query: 433 attgaagagattgcccggacagcaccgattaagtacttgcaccggtatttagtgctgaag 492 ||||||||||||||| ||||||| || || |||||||| ||||||||||||||||| ||| Sbjct: 361 attgaagagattgccaggacagcgccaatcaagtacttacaccggtatttagtgctcaag 420 Query: 493 ggagtcgcatcccaagactatgatgacttcaaggcaatgctgacatccctttggtttact 552 |||||||| || ||||||||||| ||||||||| |||||||||||| || ||||| | Sbjct: 421 ggagtcgcgtctcaagactatgaggacttcaagagaatgctgacatcgctatggttcgat 480 Query: 553 ttgtatggaagatgtggtaactctagctgctcttctgcatttgagcatgtg 603 |||||||||||| |||| | |||||| ||||||||||||||||||||||| Sbjct: 481 ttgtatggaagaggtggcagttctagcagctcttctgcatttgagcatgtg 531
>gb|AY110353.1| Zea mays CL9084_1 mRNA sequence Length = 668 Score = 79.8 bits (40), Expect = 1e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 552 tttgtatggaagatgtggtaactctagctgctcttctgcatttgagcatgtg 603 ||||||||||||| |||| |||||||||||||||||||| |||||||||||| Sbjct: 659 tttgtatggaagaggtggcaactctagctgctcttctgcctttgagcatgtg 608
>gb|AY525610.1| Homo sapiens progesterone receptor (PGR) gene, complete cds Length = 96124 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattgccc 448 |||||||||||||||||||||||||| Sbjct: 53482 agcagcatttattgaagagattgccc 53507
>dbj|AP001533.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-788M5, complete sequence Length = 207183 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagagattgccc 448 |||||||||||||||||||||||||| Sbjct: 61043 agcagcatttattgaagagattgccc 61018
>emb|AL356789.16| Human DNA sequence from clone RP5-1076L12 on chromosome 1p32.1-33 Contains the 3' end of a variant of the gene for a novel protein, complete sequence Length = 99102 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattg 445 ||||||||||||||||||||||| Sbjct: 12420 agcagcatttattgaagagattg 12442
>emb|AL354896.16| Human DNA sequence from clone RP11-512M17 on chromosome 13, complete sequence Length = 209743 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattg 445 ||||||||||||||||||||||| Sbjct: 94236 agcagcatttattgaagagattg 94258
>gb|AC007276.3| Homo sapiens BAC clone RP11-226O1 from 7, complete sequence Length = 172573 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattgccc 448 |||| ||||||||||||||||||||| Sbjct: 107356 agcaccatttattgaagagattgccc 107381
>emb|AL662896.9| Human DNA sequence from clone RP13-218H24 on chromosome X Contains the gene for a novel protein, complete sequence Length = 86097 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 423 agcagcatttattgaagagattgccc 448 |||| ||||||||||||||||||||| Sbjct: 73138 agcaccatttattgaagagattgccc 73113
>emb|AL355799.12| Human DNA sequence from clone RP11-432D3 on chromosome 13 Contains a novel gene, complete sequence Length = 184561 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 423 agcagcatttattgaagagattgccc 448 |||| ||||||||||||||||||||| Sbjct: 108186 agcaccatttattgaagagattgccc 108161
>emb|Z99569.1|HS106H14 Human DNA sequence from clone RP1-106H14 on chromosome Xq21.1-21.33 Contains a CpG island, complete sequence Length = 80730 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagat 443 ||||||||||||||||||||| Sbjct: 2693 agcagcatttattgaagagat 2713
>gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromosome 12, complete sequence Length = 171738 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 58012 catttattgaagagattgccc 57992
>emb|AL590139.11| Human DNA sequence from clone RP11-349N19 on chromosome X Contains the 3' end of the GRIA3 gene for glutamate receptor ionotrophic AMPA 3 and a H3 histone, family 3B (H3.3B) (H3F3B) pseudogene, complete sequence Length = 75359 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 65370 catttattgaagagattgccc 65390
>emb|AL590386.5| Human DNA sequence from clone RP11-721G21 on chromosome 9, complete sequence Length = 90510 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 18642 catttattgaagagattgccc 18662
>emb|AL137841.9| Human DNA sequence from clone RP11-42J13 on chromosome Xq27.3-28, complete sequence Length = 64079 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 24388 catttattgaagagattgccc 24408
>gb|AC027667.20| Homo sapiens 12 BAC RP11-972L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 63082 catttattgaagagattgccc 63062
>gb|AC090448.5| Homo sapiens chromosome 8, clone RP11-142M8, complete sequence Length = 82020 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 74914 catttattgaagagattgccc 74894
>gb|AC007751.3|AC007751 Homo sapiens, clone 5_A_11, complete sequence Length = 158963 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 149918 catttattgaagagattgccc 149938
>emb|CT574567.3| Pan troglodytes chromosome X clone PTB-059K09 map Xq28, complete sequence Length = 163464 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 126386 catttattgaagagattgccc 126406
>dbj|AP003087.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-594014, complete sequences Length = 100403 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattgcc 447 |||| |||||||||||||||||||| Sbjct: 71714 agcaccatttattgaagagattgcc 71738
>dbj|AP004288.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1735D4 Length = 212373 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 catttattgaagagattgccc 448 ||||||||||||||||||||| Sbjct: 137248 catttattgaagagattgccc 137228
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ccagggaagagctcaacagcttga 172 |||| ||||||||||||||||||| Sbjct: 42870 ccagcgaagagctcaacagcttga 42847
>gb|U28992.1| Caenorhabditis elegans cosmid T05C1, complete sequence Length = 34000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gggaagagctcaacagcttg 171 |||||||||||||||||||| Sbjct: 32708 gggaagagctcaacagcttg 32727
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 accatctgaacaagagtact 103 |||||||||||||||||||| Sbjct: 182817 accatctgaacaagagtact 182798
>gb|AC150687.3| Bos taurus BAC CH240-243M2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 144223 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 100696 agcagcatttattgaagaga 100715
>gb|AC147390.4| Pan troglodytes BAC clone RP43-51G14 from 7, complete sequence Length = 168525 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 42449 agcagcatttattgaagaga 42468
>gb|AC146097.4| Pan troglodytes BAC clone RP43-50K16 from 7, complete sequence Length = 183088 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 48068 agcagcatttattgaagaga 48049
>gb|AC092249.3| Canis familiaris clone RP81-256F7, complete sequence Length = 42879 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 8011 agcagcatttattgaagaga 8030
>ref|XM_844365.1| PREDICTED: Canis familiaris similar to LINE-1 reverse transcriptase homolog (LOC607615), mRNA Length = 801 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 229 agcagcatttattgaagaga 210
>gb|AC004855.1| Homo sapiens PAC clone RP4-673O11 from 7, complete sequence Length = 74816 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 7336 agcagcatttattgaagaga 7317
>gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, complete sequence Length = 192758 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tgtggagagggaaagaaggt 263 |||||||||||||||||||| Sbjct: 7123 tgtggagagggaaagaaggt 7142
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 344993 agcagcatttattgaagaga 344974
>gb|AY049008.1| Homo sapiens mitochondrial ceramidase gene, complete cds; nuclear gene for mitochondrial product Length = 61550 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 53814 agcagcatttattgaagaga 53833
>gb|AC073424.8| Homo sapiens BAC clone RP11-653O17 from 7, complete sequence Length = 191141 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 10224 agcagcatttattgaagaga 10243
>gb|AC074024.4| Homo sapiens BAC clone RP11-791J18 from 7, complete sequence Length = 98341 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 1716 agcagcatttattgaagaga 1697
>gb|AC004161.1| Homo sapiens BAC clone CTA-208K23 from 7, complete sequence Length = 112237 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cagcatttattgaagagatt 444 |||||||||||||||||||| Sbjct: 107230 cagcatttattgaagagatt 107249
>gb|AF038608.1| Caenorhabditis elegans cosmid C09G12, complete sequence Length = 41519 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tatggcatctgaaaacttgt 298 |||||||||||||||||||| Sbjct: 8280 tatggcatctgaaaacttgt 8261
>gb|U39472.1| Caenorhabditis elegans cosmid B0304, complete sequence Length = 42282 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gggaagagctcaacagcttg 171 |||||||||||||||||||| Sbjct: 2400 gggaagagctcaacagcttg 2419
>gb|AC145774.1| Pan troglodytes BAC clone RP43-160F1 from 7, complete sequence Length = 208178 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 176942 agcagcatttattgaagaga 176961
>emb|Z98880.1|HS179P9 Human DNA sequence from clone RP1-179P9 on chromosome 6q22 Contains the 3' part of the ROS1 gene for v-ros UR2 sarcoma virus oncogene homolog 1 (avian), a novel gene and two CpG islands, complete sequence Length = 108260 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 61416 agcagcatttattgaagaga 61435
>emb|AL831782.4| Human DNA sequence from clone RP4-636P16 on chromosome 1, complete sequence Length = 71948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 22468 agcagcatttattgaagaga 22487
>emb|AL954360.3| Human DNA sequence from clone RP11-98I6 on chromosome 10 Contains a novel protein similar to KIAA0592, solute carrier family 9 member 3 (SLC9A3) pseudogene and novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), complete sequence Length = 163231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 116834 agcagcatttattgaagaga 116815
>emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chromosome 10 Contains the 3' end of the gene for apobec-1 complementation factor (ACF) (ASP), the gene for a novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), the cathepsin L-like 2 (CTSLL2) pseudogene, three novel pseudogenes (KIAA1553), a novel gene, a protein geranylgeranyltransferase type I beta subunit (PGGT1B) pseudogene and a CpG island, complete sequence Length = 178899 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 107220 agcagcatttattgaagaga 107239
>emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chromosome 10 Contains part of gene FLJ10824, a solute carrier family 9 (sodium/hydrogen exchanger) isoform 5 (SLC9A5) pseudogene, the ASAH2 gene for N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 and a dynein cytoplasmic intermediate polypeptide 2 (DNCI2) pseudogene, complete sequence Length = 162228 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 70115 agcagcatttattgaagaga 70096
>emb|AL359915.14| Human DNA sequence from clone RP11-418J17 on chromosome 1 Contains the 3' end of a novel gene, a ribosomal protein L6 (RPL6) pseudogene and the 5' end of a novel gene, complete sequence Length = 159158 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 28386 agcagcatttattgaagaga 28405
>emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chromosome 9 Contains an alpha type 7 proteasome subunit (PSMA7) pseudogene, the 3' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 182653 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 146414 agcagcatttattgaagaga 146433
>gb|AC183592.2| Pan troglodytes BAC clone CH251-733I16 from chromosome 10, complete sequence Length = 167069 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 51433 agcagcatttattgaagaga 51452
>emb|AL162231.20| Human DNA sequence from clone RP11-195F19 on chromosome 9 Contains the GALT gene for galactose-1-phosphate uridylytransferase, the IL11RA gene for interleukin 11 receptor, alpha, the SCYA27, SCYA19 and SCYA21 genes for small inducible cytokine subfamily A (Cys-Cys) members 27, 19 and 21, three novel genes and four CpG islands, complete sequence Length = 186433 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 109444 agcagcatttattgaagaga 109425
>emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chromosome 6 Contains part of a novel gene, part of the gene for a novel protein (FLJ32724) and a CpG island, complete sequence Length = 120988 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 cagcatttattgaagagatt 444 |||||||||||||||||||| Sbjct: 58505 cagcatttattgaagagatt 58486
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 41023 agcagcatttattgaagaga 41042
>emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393J16 on chromosome 10 Contains a zinc finger protein pseudogene, the ZNF25 gene for zinc finger protein 25 (KOX 19), the 5' end of the ZNF33A gene for zinc finger protein 33a (KOX 31) and two CpG islands, complete sequence Length = 161452 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgcc 447 |||||||||||||||||||| Sbjct: 23119 catttattgaagagattgcc 23138
>emb|AL121982.19|HS1185H19 Human DNA sequence from clone RP5-1185H19 on chromosome 1p13.1-13.3 Contains two novel genes and a CpG island, complete sequence Length = 104780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 94888 agcagcatttattgaagaga 94907
>emb|AL033397.7|HS27K12 Human DNA sequence from clone RP1-27K12 on chromosome 6p11.2-12.3 Contains the GCLC gene for glutamate-cysteine ligase catalytic subunit (GCS), a novel gene and one CpG island, complete sequence Length = 164027 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 11545 agcagcatttattgaagaga 11564
>emb|CR854907.6| Zebrafish DNA sequence from clone DKEYP-51H1 in linkage group 15, complete sequence Length = 187961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 gaatgtggagagggaaagaa 260 |||||||||||||||||||| Sbjct: 11331 gaatgtggagagggaaagaa 11350
>gb|AC025283.6| Homo sapiens chromosome 16 clone RP11-433P17, complete sequence Length = 179511 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 38247 agcagcatttattgaagaga 38266 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 aagcagcatttattgaagagattg 445 ||||| |||||||||||||||||| Sbjct: 31499 aagcaccatttattgaagagattg 31522
>emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chromosome 11 Contains the 5' end of the gene for a novel protein (330000P08Rik) (Luc7a), the gene for a novel protein (5530600A18Rik), the Abcc3 gene for ATP-binding cassette sub-family C (CFTR/MRP) member 3, the Cacna1g gene for calcium channel voltage-dependent T type alpha 1G subunit, the 3' end of the Tisp78 gene for transcript increased in spermiogenesis 78 and one CpG island, complete sequence Length = 161978 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tgtatggaagatgtggtaac 573 |||||||||||||||||||| Sbjct: 85805 tgtatggaagatgtggtaac 85786
>gb|AC023813.6| Homo sapiens chromosome 16 clone CTC-527H23, complete sequence Length = 127725 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 6483 agcagcatttattgaagaga 6464
>emb|CR388403.8| Zebrafish DNA sequence from clone CH211-153C18 in linkage group 2, complete sequence Length = 159100 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gggaaactgtaggggagaaa 30 |||||||||||||||||||| Sbjct: 93904 gggaaactgtaggggagaaa 93923
>gb|AC121248.2| Homo sapiens chromosome 3 clone RP11-64C1, complete sequence Length = 185845 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 154730 agcagcatttattgaagaga 154711
>gb|AF020669.1|HSMTM07 Homo sapiens myotubularin (MTM1) gene, exon 7 Length = 567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 aattacaacccacaccaagg 383 |||||||||||||||||||| Sbjct: 48 aattacaacccacaccaagg 29
>gb|AC090589.9| Homo sapiens chromosome 11, clone RP11-390K5, complete sequence Length = 190017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 189386 agcagcatttattgaagaga 189405
>gb|AC113348.2| Homo sapiens chromosome 5 clone CTD-2537M22, complete sequence Length = 80723 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 ttcaaggcaatgctgacatc 539 |||||||||||||||||||| Sbjct: 16220 ttcaaggcaatgctgacatc 16201
>gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, complete sequence Length = 140040 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 33979 agcagcatttattgaagaga 33998
>gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence Length = 143034 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgtggagagggaaagaaggt 263 |||||||||||||||||||| Sbjct: 28100 tgtggagagggaaagaaggt 28081
>gb|AC099786.2| Homo sapiens chromosome 1 clone RP11-510C10, complete sequence Length = 181443 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 68366 agcagcatttattgaagaga 68347
>gb|AC108067.3| Homo sapiens BAC clone RP11-554D13 from 4, complete sequence Length = 122825 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 97622 agcagcatttattgaagaga 97603
>gb|AC007437.16| Homo sapiens 12q22 BAC RPCI11-541G9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gaaactgtaggggagaaaag 32 |||||||||||||||||||| Sbjct: 175562 gaaactgtaggggagaaaag 175581
>gb|AC107934.3| Homo sapiens chromosome 8, clone RP11-960H2, complete sequence Length = 161638 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgcc 447 |||||||||||||||||||| Sbjct: 54133 catttattgaagagattgcc 54152
>gb|AC009758.8| Homo sapiens chromosome 11, clone RP11-101E4, complete sequence Length = 141485 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 114129 agcagcatttattgaagaga 114148
>gb|AC090802.6| Homo sapiens chromosome 8, clone RP11-152P17, complete sequence Length = 162549 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 aagcagcatttattgaagagattg 445 ||||| |||||||||||||||||| Sbjct: 105005 aagcaccatttattgaagagattg 105028
>gb|AF391283.1|AF391283 Homo sapiens 11p15.5 clone LOH11A, partial sequence Length = 82761 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 56813 agcagcatttattgaagaga 56832
>gb|AC044814.6| Homo sapiens chromosome 8, clone RP11-688B7, complete sequence Length = 186369 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 catttattgaagagattgcc 447 |||||||||||||||||||| Sbjct: 93210 catttattgaagagattgcc 93191
>gb|AC020729.7| Homo sapiens BAC clone RP11-507M13 from 4, complete sequence Length = 75208 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 48699 agcagcatttattgaagaga 48718
>gb|AC018793.12| Homo sapiens chromosome 11, clone RP11-437G21, complete sequence Length = 202956 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 30958 agcagcatttattgaagaga 30977
>ref|NM_062395.2| Caenorhabditis elegans T05C1.4b (T05C1.4) mRNA, complete cds Length = 3492 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gggaagagctcaacagcttg 171 |||||||||||||||||||| Sbjct: 230 gggaagagctcaacagcttg 211
>ref|NM_062394.3| Caenorhabditis elegans T05C1.4a (T05C1.4) mRNA, complete cds Length = 3761 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gggaagagctcaacagcttg 171 |||||||||||||||||||| Sbjct: 230 gggaagagctcaacagcttg 211
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ccagggaagagctcaacagcttga 172 |||| ||||||||||||||||||| Sbjct: 7774085 ccagcgaagagctcaacagcttga 7774108
>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence Length = 168591 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 45590 agcagcatttattgaagaga 45571
>gb|AC012593.8| Homo sapiens BAC clone RP11-511B24 from 2, complete sequence Length = 166074 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 50386 agcagcatttattgaagaga 50405
>gb|AC068286.5| Homo sapiens BAC clone RP11-526G2 from 2, complete sequence Length = 137631 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 62837 agcagcatttattgaagaga 62818
>gb|AC147976.3| Pan troglodytes BAC clone CH251-543E22 from chromosome 7, complete sequence Length = 231294 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 15955 agcagcatttattgaagaga 15936
>gb|AC146416.4| Pan troglodytes BAC clone RP43-32B6 from chromosome 7, complete sequence Length = 180657 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 31009 agcagcatttattgaagaga 30990
>gb|AF002223.2| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 209932 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 aattacaacccacaccaagg 383 |||||||||||||||||||| Sbjct: 53411 aattacaacccacaccaagg 53392
>gb|AF101874.4|AF101874 Homo sapiens clone pTWB9n12.11T7 sequence Length = 10749 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 2678 agcagcatttattgaagaga 2659
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 actacagaattgaatgtgga 249 |||||||||||||||||||| Sbjct: 1304279 actacagaattgaatgtgga 1304298
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 agcagcatttattgaagagattgc 446 |||| ||||||||||||||||||| Sbjct: 78787 agcaccatttattgaagagattgc 78764
>gb|AC007312.1|AC007312 Homo sapiens clone RP11-349E11 from 7p14-15, complete sequence Length = 185652 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 97728 agcagcatttattgaagaga 97747
>emb|AL845440.23| Mouse DNA sequence from clone RP23-294B7 on chromosome 2, complete sequence Length = 188464 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 acatccctttggtttacttt 554 |||||||||||||||||||| Sbjct: 161828 acatccctttggtttacttt 161809
>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete sequence Length = 312283 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 catttattgaagagattgcc 447 |||||||||||||||||||| Sbjct: 102630 catttattgaagagattgcc 102649
>emb|CR391939.4| Zebrafish DNA sequence from clone CH211-269G3 in linkage group 18, complete sequence Length = 83565 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ttcttgacaattacaaccca 375 |||||||||||||||||||| Sbjct: 37973 ttcttgacaattacaaccca 37992
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gatatggcatctgaaaactt 296 |||||||||||||||||||| Sbjct: 9722 gatatggcatctgaaaactt 9741
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ccagggaagagctcaacagcttga 172 |||| ||||||||||||||||||| Sbjct: 7844172 ccagcgaagagctcaacagcttga 7844195
>gb|AC003966.1|AC003966 Homo sapiens chromosome 16, cosmid clone 385D9, complete sequence Length = 36037 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 33226 agcagcatttattgaagaga 33245 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 aagcagcatttattgaagagattg 445 ||||| |||||||||||||||||| Sbjct: 26481 aagcaccatttattgaagagattg 26504
>gb|U01882.1|HSU01882 Homo sapiens SS-A/Ro autoantigen 52 kda component gene, complete cds Length = 13270 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 7386 agcagcatttattgaagaga 7405
>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177792 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 agcagcatttattgaagagattgc 446 |||| ||||||||||||||||||| Sbjct: 70543 agcaccatttattgaagagattgc 70566
>gb|U13657.1|HSROSSA1 Human 52 kD Ro/SSA autoantigen (RO52) gene, exons 1 and 2 Length = 2796 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 1156 agcagcatttattgaagaga 1175
>gb|AC109994.2| Homo sapiens chromosome X clone CTD-2537J14 map q28, complete sequence Length = 198434 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 aattacaacccacaccaagg 383 |||||||||||||||||||| Sbjct: 195756 aattacaacccacaccaagg 195737
>gb|AC018410.24| Homo sapiens chromosome 11, clone RP11-17G12, complete sequence Length = 147024 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 64383 agcagcatttattgaagaga 64364
>dbj|AP003484.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-734C14, complete sequence Length = 206750 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agcagcatttattgaagaga 442 |||||||||||||||||||| Sbjct: 102295 agcagcatttattgaagaga 102276 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,101,833 Number of Sequences: 3902068 Number of extensions: 5101833 Number of successful extensions: 96311 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95997 Number of HSP's gapped (non-prelim): 309 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)