>ref|NM_187745.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score =  557 bits (281), Expect = e-155
 Identities = 527/609 (86%)
 Strand = Plus / Plus

                                                                        
Query: 5    tgcagccgtgcagactttagtaaagagccagctttcagttggatacgtaaacttccagca 64
            |||||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| 
Sbjct: 577  tgcagccgagcagactttagtgatgagccagctttcagttggatacgtaaactcccagct 636

                                                                        
Query: 65   gaaaccaagatagccattcatcactctaaaatattgtttagcaatggatatgcttttgat 124
            |||||||||| ||| ||||||||||| |||||||||||  | ||||| ||||||||||||
Sbjct: 637  gaaaccaagacagctattcatcactccaaaatattgttctgtaatggctatgcttttgat 696

                                                                        
Query: 125  gaattttcccctgatgtgatcgcatctgctattgattgtgcgattgatgcgggaacatca 184
            ||| ||| ||||||||||||| | || ||||||||||| || ||||||||||||||| ||
Sbjct: 697  gaacttttccctgatgtgatctcgtccgctattgattgcgcaattgatgcgggaacagca 756

                                                                        
Query: 185  atattctttgatcctgggcctcgtggaagatctctcttacatgggaacccggatgaacag 244
             |||| ||||||||||| ||||| |||| ||||||||||||||| | ||  |||||||||
Sbjct: 757  gtattttttgatcctggtcctcgaggaaaatctctcttacatggtacccttgatgaacag 816

                                                                        
Query: 245  agagcacttgagcacgctctgaggctcagcgatgttctccttttgacgtcagatgaggct 304
            || |||||||||||  ||||||||||||| |||||||| ||||| || ||||| ||||||
Sbjct: 817  agggcacttgagcattctctgaggctcagtgatgttctgcttttaacatcagacgaggct 876

                                                                        
Query: 305  gagtcgctaaccaacatccgaaacccaattcaggcagggcaagagttgctaagaagagga 364
            ||||| || || |||||| |||||||||| |||||||||||||||||||| |  || || 
Sbjct: 877  gagtccctgacgaacatcagaaacccaatccaggcagggcaagagttgctgaagaggggg 936

                                                                        
Query: 365  acccgcacaaaatgggttgtcatcaaaatgggttccaagggatcaatcatgatcaccgaa 424
            |  |||||||| ||||||||||| |||||||| || ||||||||||||||| | ||  | 
Sbjct: 937  attcgcacaaagtgggttgtcataaaaatgggctcaaagggatcaatcatggttacgaag 996

                                                                        
Query: 425  agtgctgtttcgtgtgcaccttcttttaagatccgcgtcgtggacaccgttggatgcgga 484
            |||||||| ||  |||||||||| ||||||||   ||| ||||||||||||||||| |||
Sbjct: 997  agtgctgtctccagtgcaccttcatttaagattgacgttgtggacaccgttggatgtgga 1056

                                                                        
Query: 485  gatagcttcactgctgctatagcttttgggttcctccatgacttgccagcgattagcaca 544
            |||||||| |||||||||||||||||||||||||||||  ||||||||||  ||||||||
Sbjct: 1057 gatagctttactgctgctatagcttttgggttcctccacaacttgccagcagttagcaca 1116

                                                                        
Query: 545  ctagcactagcaaatgcagtcggtgctgctaccgccactggatgtggagcaggcaggaat 604
            ||  |||||||||||||||| |||||||| || |||||||| ||||| |||||  |||||
Sbjct: 1117 ctgacactagcaaatgcagtgggtgctgcaactgccactggctgtggggcaggtcggaat 1176

                     
Query: 605  gtcgctcac 613
            || ||||||
Sbjct: 1177 gttgctcac 1185

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  293 bits (148), Expect = 3e-76
 Identities = 259/296 (87%)
 Strand = Plus / Plus

                                                                           
Query: 7       cagccgtgcagactttagtaaagagccagctttcagttggatacgtaaacttccagcaga 66
               |||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 3462311 cagccgagcagactttagtgatgagccagctttcagttggatacgtaaactcccagctga 3462370

                                                                           
Query: 67      aaccaagatagccattcatcactctaaaatattgtttagcaatggatatgcttttgatga 126
               |||||||| ||| ||||||||||| |||||||||||  | ||||| ||||||||||||||
Sbjct: 3462371 aaccaagacagctattcatcactccaaaatattgttctgtaatggctatgcttttgatga 3462430

                                                                           
Query: 127     attttcccctgatgtgatcgcatctgctattgattgtgcgattgatgcgggaacatcaat 186
               | ||| ||||||||||||| | || ||||||||||| || ||||||||||||||| || |
Sbjct: 3462431 acttttccctgatgtgatctcgtccgctattgattgcgcaattgatgcgggaacagcagt 3462490

                                                                           
Query: 187     attctttgatcctgggcctcgtggaagatctctcttacatgggaacccggatgaacagag 246
               ||| ||||||||||| ||||| |||| ||||||||||||||| | ||  |||||||||||
Sbjct: 3462491 attttttgatcctggtcctcgaggaaaatctctcttacatggtacccttgatgaacagag 3462550

                                                                       
Query: 247     agcacttgagcacgctctgaggctcagcgatgttctccttttgacgtcagatgagg 302
                |||||||||||  ||||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 3462551 ggcacttgagcattctctgaggctcagtgatgttctgcttttaacatcagacgagg 3462606



 Score =  170 bits (86), Expect = 3e-39
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                           
Query: 464     gtggacaccgttggatgcggagatagcttcactgctgctatagcttttgggttcctccat 523
               ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 3463186 gtggacaccgttggatgtggagatagctttactgctgctatagcttttgggttcctccac 3463245

                                                                           
Query: 524     gacttgccagcgattagcacactagcactagcaaatgcagtcggtgctgctaccgccact 583
                ||||||||||  ||||||||||  |||||||||||||||| |||||||| || ||||||
Sbjct: 3463246 aacttgccagcagttagcacactgacactagcaaatgcagtgggtgctgcaactgccact 3463305

                                             
Query: 584     ggatgtggagcaggcaggaatgtcgctcac 613
               || ||||| |||||  ||||||| ||||||
Sbjct: 3463306 ggctgtggggcaggtcggaatgttgctcac 3463335



 Score =  109 bits (55), Expect = 1e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                           
Query: 300     aggctgagtcgctaaccaacatccgaaacccaattcaggcagggcaagagttgctaagaa 359
               |||||||||| || || |||||| |||||||||| |||||||||||||||||||| |  |
Sbjct: 3462944 aggctgagtccctgacgaacatcagaaacccaatccaggcagggcaagagttgctgaaga 3463003

                                                                           
Query: 360     gaggaacccgcacaaaatgggttgtcatcaaaatgggttccaagggatcaatcatgatca 419
               | || |  |||||||| ||||||||||| |||||||| || ||||||||||||||| | |
Sbjct: 3463004 gggggattcgcacaaagtgggttgtcataaaaatgggctcaaagggatcaatcatggtta 3463063

                                                  
Query: 420     ccgaaagtgctgtttcgtgtgcaccttcttttaag 454
               |  | |||||||| ||  |||||||||| ||||||
Sbjct: 3463064 cgaagagtgctgtctccagtgcaccttcatttaag 3463098

>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score =  293 bits (148), Expect = 3e-76
 Identities = 259/296 (87%)
 Strand = Plus / Minus

                                                                         
Query: 7     cagccgtgcagactttagtaaagagccagctttcagttggatacgtaaacttccagcaga 66
             |||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 48064 cagccgagcagactttagtgatgagccagctttcagttggatacgtaaactcccagctga 48005

                                                                         
Query: 67    aaccaagatagccattcatcactctaaaatattgtttagcaatggatatgcttttgatga 126
             |||||||| ||| ||||||||||| |||||||||||  | ||||| ||||||||||||||
Sbjct: 48004 aaccaagacagctattcatcactccaaaatattgttctgtaatggctatgcttttgatga 47945

                                                                         
Query: 127   attttcccctgatgtgatcgcatctgctattgattgtgcgattgatgcgggaacatcaat 186
             | ||| ||||||||||||| | || ||||||||||| || ||||||||||||||| || |
Sbjct: 47944 acttttccctgatgtgatctcgtccgctattgattgcgcaattgatgcgggaacagcagt 47885

                                                                         
Query: 187   attctttgatcctgggcctcgtggaagatctctcttacatgggaacccggatgaacagag 246
             ||| ||||||||||| ||||| |||| ||||||||||||||| | ||  |||||||||||
Sbjct: 47884 attttttgatcctggtcctcgaggaaaatctctcttacatggtacccttgatgaacagag 47825

                                                                     
Query: 247   agcacttgagcacgctctgaggctcagcgatgttctccttttgacgtcagatgagg 302
              |||||||||||  ||||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 47824 ggcacttgagcattctctgaggctcagtgatgttctgcttttaacatcagacgagg 47769



 Score =  170 bits (86), Expect = 3e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                         
Query: 464   gtggacaccgttggatgcggagatagcttcactgctgctatagcttttgggttcctccat 523
             ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 47189 gtggacaccgttggatgtggagatagctttactgctgctatagcttttgggttcctccac 47130

                                                                         
Query: 524   gacttgccagcgattagcacactagcactagcaaatgcagtcggtgctgctaccgccact 583
              ||||||||||  ||||||||||  |||||||||||||||| |||||||| || ||||||
Sbjct: 47129 aacttgccagcagttagcacactgacactagcaaatgcagtgggtgctgcaactgccact 47070

                                           
Query: 584   ggatgtggagcaggcaggaatgtcgctcac 613
             || ||||| |||||  ||||||| ||||||
Sbjct: 47069 ggctgtggggcaggtcggaatgttgctcac 47040



 Score =  109 bits (55), Expect = 1e-20
 Identities = 130/155 (83%)
 Strand = Plus / Minus

                                                                         
Query: 300   aggctgagtcgctaaccaacatccgaaacccaattcaggcagggcaagagttgctaagaa 359
             |||||||||| || || |||||| |||||||||| |||||||||||||||||||| |  |
Sbjct: 47431 aggctgagtccctgacgaacatcagaaacccaatccaggcagggcaagagttgctgaaga 47372

                                                                         
Query: 360   gaggaacccgcacaaaatgggttgtcatcaaaatgggttccaagggatcaatcatgatca 419
             | || |  |||||||| ||||||||||| |||||||| || ||||||||||||||| | |
Sbjct: 47371 gggggattcgcacaaagtgggttgtcataaaaatgggctcaaagggatcaatcatggtta 47312

                                                
Query: 420   ccgaaagtgctgtttcgtgtgcaccttcttttaag 454
             |  | |||||||| ||  |||||||||| ||||||
Sbjct: 47311 cgaagagtgctgtctccagtgcaccttcatttaag 47277

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  293 bits (148), Expect = 3e-76
 Identities = 259/296 (87%)
 Strand = Plus / Plus

                                                                           
Query: 7       cagccgtgcagactttagtaaagagccagctttcagttggatacgtaaacttccagcaga 66
               |||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 3462422 cagccgagcagactttagtgatgagccagctttcagttggatacgtaaactcccagctga 3462481

                                                                           
Query: 67      aaccaagatagccattcatcactctaaaatattgtttagcaatggatatgcttttgatga 126
               |||||||| ||| ||||||||||| |||||||||||  | ||||| ||||||||||||||
Sbjct: 3462482 aaccaagacagctattcatcactccaaaatattgttctgtaatggctatgcttttgatga 3462541

                                                                           
Query: 127     attttcccctgatgtgatcgcatctgctattgattgtgcgattgatgcgggaacatcaat 186
               | ||| ||||||||||||| | || ||||||||||| || ||||||||||||||| || |
Sbjct: 3462542 acttttccctgatgtgatctcgtccgctattgattgcgcaattgatgcgggaacagcagt 3462601

                                                                           
Query: 187     attctttgatcctgggcctcgtggaagatctctcttacatgggaacccggatgaacagag 246
               ||| ||||||||||| ||||| |||| ||||||||||||||| | ||  |||||||||||
Sbjct: 3462602 attttttgatcctggtcctcgaggaaaatctctcttacatggtacccttgatgaacagag 3462661

                                                                       
Query: 247     agcacttgagcacgctctgaggctcagcgatgttctccttttgacgtcagatgagg 302
                |||||||||||  ||||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 3462662 ggcacttgagcattctctgaggctcagtgatgttctgcttttaacatcagacgagg 3462717



 Score =  170 bits (86), Expect = 3e-39
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                           
Query: 464     gtggacaccgttggatgcggagatagcttcactgctgctatagcttttgggttcctccat 523
               ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 3463297 gtggacaccgttggatgtggagatagctttactgctgctatagcttttgggttcctccac 3463356

                                                                           
Query: 524     gacttgccagcgattagcacactagcactagcaaatgcagtcggtgctgctaccgccact 583
                ||||||||||  ||||||||||  |||||||||||||||| |||||||| || ||||||
Sbjct: 3463357 aacttgccagcagttagcacactgacactagcaaatgcagtgggtgctgcaactgccact 3463416

                                             
Query: 584     ggatgtggagcaggcaggaatgtcgctcac 613
               || ||||| |||||  ||||||| ||||||
Sbjct: 3463417 ggctgtggggcaggtcggaatgttgctcac 3463446



 Score =  109 bits (55), Expect = 1e-20
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                           
Query: 300     aggctgagtcgctaaccaacatccgaaacccaattcaggcagggcaagagttgctaagaa 359
               |||||||||| || || |||||| |||||||||| |||||||||||||||||||| |  |
Sbjct: 3463055 aggctgagtccctgacgaacatcagaaacccaatccaggcagggcaagagttgctgaaga 3463114

                                                                           
Query: 360     gaggaacccgcacaaaatgggttgtcatcaaaatgggttccaagggatcaatcatgatca 419
               | || |  |||||||| ||||||||||| |||||||| || ||||||||||||||| | |
Sbjct: 3463115 gggggattcgcacaaagtgggttgtcataaaaatgggctcaaagggatcaatcatggtta 3463174

                                                  
Query: 420     ccgaaagtgctgtttcgtgtgcaccttcttttaag 454
               |  | |||||||| ||  |||||||||| ||||||
Sbjct: 3463175 cgaagagtgctgtctccagtgcaccttcatttaag 3463209

>emb|AL672035.7| Mouse DNA sequence from clone RP23-314N8 on chromosome X, complete
             sequence
          Length = 154002

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   ttgatgaattttcccctgatg 140
             |||||||||||||||||||||
Sbjct: 82721 ttgatgaattttcccctgatg 82741

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 472     cgttggatgcggagatagct 491
               ||||||||||||||||||||
Sbjct: 1085590 cgttggatgcggagatagct 1085609

>gb|BT013722.1| Lycopersicon esculentum clone 132570F, mRNA sequence
          Length = 2002

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 5   tgcagccgtgcagactttagtaaagagccagctttcagttggat 48
           ||||| |||||||| ||||||  ||| || ||||||||||||||
Sbjct: 642 tgcagtcgtgcagattttagtgcagatcctgctttcagttggat 685

>gb|AC106857.8| Homo sapiens chromosome 8, clone RP11-262O21, complete sequence
          Length = 159454

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   aatattctttgatcctgggc 203
             ||||||||||||||||||||
Sbjct: 98427 aatattctttgatcctgggc 98446

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     tgtgcaccttcttttaagat 456
               ||||||||||||||||||||
Sbjct: 2232150 tgtgcaccttcttttaagat 2232169

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 80      attcatcactctaaaatattgttt 103
               |||||| |||||||||||||||||
Sbjct: 1984473 attcataactctaaaatattgttt 1984496

>gb|AC104841.6| Homo sapiens BAC clone RP11-475G3 from 2, complete sequence
          Length = 133221

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   aacatcaatattctttgatc 197
             ||||||||||||||||||||
Sbjct: 67192 aacatcaatattctttgatc 67173

>gb|AC135085.3| Mus musculus BAC clone RP24-317P24 from 1, complete sequence
          Length = 214594

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     cagaaaccaagatagccatt 82
              ||||||||||||||||||||
Sbjct: 134449 cagaaaccaagatagccatt 134430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,032,164
Number of Sequences: 3902068
Number of extensions: 5032164
Number of successful extensions: 93370
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93254
Number of HSP's gapped (non-prelim): 112
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)