>Y1474_METJA (Q58869) UPF0129 protein MJ1474|
          Length = 197

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 327 PPKRVDFWMINRLTFDLFSFFRSGI 401
           PP+    W+IN+  + LF+ +RSGI
Sbjct: 6   PPEFYKLWIINKSPYQLFNIYRSGI 30

>WDR47_MOUSE (Q8CGF6) WD-repeat protein 47|
          Length = 920

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
 Frame = -3

Query: 555 VHFMETKATSKIRYSKICILFSARRLCG----TGWNSEGTKMSLVNSWNLKASMKICHS* 388
           +H +E    SK  YSK+C+L +  RL        WN    ++       +  +  I    
Sbjct: 121 LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEVCVMVAEFIP--- 177

Query: 387 KN*RDQKLADL---SSRNQLFLEVLEGLESKYCI 295
               D+KL++    +S N+LF  V++GL  + C+
Sbjct: 178 ---ADRKLSEAGFKASNNRLFQLVMKGLLYECCV 208

>WDR47_HUMAN (O94967) WD-repeat protein 47|
          Length = 919

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
 Frame = -3

Query: 555 VHFMETKATSKIRYSKICILFSARRLCG----TGWNSEGTKMSLVNSWNLKASMKICHS* 388
           +H +E    SK  YSK+C+L +  RL        WN    ++       +  +  I    
Sbjct: 121 LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIP--- 177

Query: 387 KN*RDQKLADL---SSRNQLFLEVLEGLESKYCI 295
               D+KL++    +S N+LF  V++GL  + C+
Sbjct: 178 ---ADRKLSEAGFKASNNRLFQLVMKGLLYECCV 208

>GRAP2_MOUSE (O89100) GRB2-related adaptor protein 2 (GADS protein) (Growth|
           factor receptor-binding protein) (GRBLG) (GRB-2-like
           protein) (GRB2L) (Hematopoietic cell-associated adaptor
           protein GrpL) (GRB-2-related monocytic adapter protein)
           (Monocytic ada
          Length = 322

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 243 ISFHSEDEVPS---AR*SRGEYSIWTRDLPKPPKRVDFWMINRLTFDLFSFFRSG 398
           IS   ED+V      R ++G Y +WT   P   K VD++    ++     F R G
Sbjct: 94  ISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISKQKQVFLRDG 148

>GRAP2_HUMAN (O75791) GRB2-related adapter protein 2 (GADS protein) (Growth|
           factor receptor-binding protein) (GRBLG) (Grf40 adapter
           protein) (Grf-40) (GRB-2-like protein) (GRB2L) (GRBX)
           (P38) (Hematopoietic cell-associated adapter protein
           GrpL) (Adapter p
          Length = 330

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 243 ISFHSEDEVPS---AR*SRGEYSIWTRDLPKPPKRVDFWMINRLTFDLFSFFR 392
           IS   ED+V      R ++G Y +WT   P   K VD++  N ++     F R
Sbjct: 94  ISVRHEDDVQHFKVMRDNKGNYFLWTEKFPSLNKLVDYYRTNSISRQKQIFLR 146

>LYTS_BACSU (P94513) Sensor protein lytS (EC 2.7.13.3)|
          Length = 593

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/84 (27%), Positives = 35/84 (41%)
 Frame = +3

Query: 336 RVDFWMINRLTFDLFSFFRSGISSCLPLNSMNSPRTFLSPLSSNLSHIGDVLRIEYRFWS 515
           R D     +L   L  +FRS +            R  L PLS  L+H+   L +E   + 
Sbjct: 404 RTDVEKTRKLLLQLSVYFRSNLQGA---------RQLLIPLSKELNHLNAYLSLEQARFP 454

Query: 516 NESWMSLLFP*NAPLIHVESPPFV 587
            +  + L    ++ L  +E PPFV
Sbjct: 455 GKYKIELNI--DSRLEQIEIPPFV 476

>ARA_DROME (Q24248) Homeobox protein araucan|
          Length = 717

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 298 YSPRDYRAEGTSSSEWKEISVKQYTEILFQPLHSK 194
           YSPRD  + G SSS        Q  E +F+PL  K
Sbjct: 680 YSPRDDYSSGNSSSSSSSSPQLQRNEAMFKPLFKK 714


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,281,309
Number of Sequences: 219361
Number of extensions: 1755741
Number of successful extensions: 4755
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4755
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)